Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0009385

Physical Location & Seq

Genomic Coordinates Reverse (-)

8265865 .. 8282364

Gene Structure 16500 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G104700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2355 bp

ATGGCGGAGGTTGATGCTCATACACAAGAAGAGTTCTTTGACGTCCTCACCAAAACCGGAGAGAAGACCGGCATTTCCAAGCCCAGGGGAGATGTTCATCGAGACGGAGATTACCATCGAGCTGTACATGTGTGGATTTTTGCTGAGAGTACACAGGAACTTCTTATCCAACGACGAGCTGACTGCAAGGATTCATGGGCGGGGCTGTGGGATATCTCAAGTGCTGGACACATATCCGCTGGTGATTCGTCACTCGTAACAGCTCGGAGGGAGCTTCAAGAAGAGCTAGGTGTAACACTTCCAAAGGACGCATTTGAAATGATATTCGTTTTTCTTCAAGAGTGTGTAACAAATGATGGAAAATTCATCAATAATGAATTCAATGATGTATATTTGGTTACAACTGTAGATCCAATCCCTCTTGAGGCATTTACTCTTCAGGAAACAGAAGTCTCTGCTGTTAAATATATTTCTTACGAGGAGTATAGAAGCTTACTTGCTAAAGAAGATCTTGAGTACGTCCCCTATGATGTAAATGGGGAATACGGTCAGCTTTTTGACATAATTGCAAGGAGGTACAAGGAGAACACTATAGCTCGAAGTTTATCTCTACAAAAGCAACTCCAACGTTATGCTCCTGTTTCTCTCAGTGCCGAGTTAGCAGGGCTTCCAGATGCAGACAGGGAGGCTCTGGTGTTACTAATTAAGGCTGCAGCAATTATGGACGAAATCTTTTACCTGCAGGTTTGGTACAGTAATCCAGTTCTACGAGATTGGTTAAAGGAGCATGCTGATGCATCACAGTTAGACAAATTGAAATGGATGTATTACGTAATTAATAAGAGTCCATGGTCATCCCTTGATGAAAATGAGGCATTTTTGACAACTGCGGATTCGGCTATAAAGTTGCTTCCTGAAGCGACTAGACCTGTTACTGGGTGGAAGGGACTTGAATACAAAGCTGCGTTTCCTGTGCTGAAACCACCTGGTGCAAACTTCTACCCGCCAGACATGGACAAAGTGGAATTTGAATTGTGGAAGACCAGTCTAACAGAGGACCAACAACAAGCTGCAACAGGCTTTTTCACTGTTATTAAAAGACACAGTGAATTCAGTCTGGATTCTTCCTTGTATAGTAGTACAGTTAGCAGCACAAATCATTCAGTGGGTTCCACTCATGATCTATATAGTGTTCCTTTCTCCGAAGAGTATAATTCTTCCATCACACGAGCTGCTGAGTTCTTGCATAAAGCTGGTGACTTGGCCAGTTCTCCTAGTTTGAAGAGGTTTCTTCACAGCAAGGCCGATGCTTTTCTTTCAAATGACTACTATGACTCGGATATAGCCTGGATGGAGTTGGACTCAAAGCTGGATGTTACTATTGGTCCATATGAAACATATGAAGATGCTCTTTTTGGATATAAGGCTACATTTGAAGCATTTATTGGAGTTCGGGATGACAAAGCAACAGCTCAATTAAAACTTTTTGGTGATAATTTGCAGGTTCTGGAGCAAAATCTCCCACTGGACAATGTGTACAAGTCCAAAGATGTGATTTCTGCTCCTATTCGAGTCATCGATCTTCTTTATAATGCAGGAGATGTAAAGGGTCCTCAAACTGTTGCTTTTAATCTACCAAATGACGAGCATATAGTAAAAGATCGAGGAACATCAATGGTCATGCTGAAGAATATCTCAGAGGCTAAGTTCAAGCACATTCTTCAGCCTATAGCCGATGTTTGTATTACAAAGGAACAACAAGAACTTGTAGATTTTGAATCTTTCTTTACTCACACAATTTGCCATGAGTGCTGCCATGGGATTGGACCTCATAGCATAACACTTCCAAATGGTAGAAAGTCTACAGTGAGATTGGAACTGCAAGAACTCCACTCCGCTCTGGAAGAAGCAAAAGCTGATATAGTTGGCCTTTGGGCGTTGAAATTCCTAATCCACAAGGATTTGCTCCCAAAGACTTTATTGAAGTCCATGTATGTTTCATTTCTTGCTGGATGCTTCCGCTCAGTGCGGTTTGGTCTTGAGGAAGCTCACGGAAAAGGACAAGCATTGCAGTTTAACTGGTTGTATGAGAAAGGAGCCTTTATCTTGAACCCTGAGGAAACATTTTCTGTTGACTTTACCAAGGTTGAAGGTGCAGTTGAGAGCCTGAGTAGGGAGATACTCACCATACAAGCAAAAGGTGACAAAGAGGCTGCAAATTTGCTGCTTCAGAAACACTGCAAACTGACGGACCCATTAAAAGTTGCTTTGCAAAGATTGGAGAAAATTCAGGTACCTGTGGATATAGTGCCCGCGTTCTCGGTAATTGATAAAATATTGGAGCAAAGATGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004177 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005829 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008238 GO:0008239 GO:0016787 GO:0019538 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NUDIX Peptidase_M49

Protein Analysis

785

Amino Acids

88.53

Weight (kDa)

5.06

Isoelectric Point (pI)

40.16

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009385)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79690 AT1G79690
fragaria_vesca	FvH4_6g28160 FvH4_6g28160 FvH4_6g28160 FvH4_6g28160 FvH4_6g28160 FvH4_6g28160
malus_domestica	MD17G1227300.v1.1
prunus_persica	Prupe.3G104700_v2.0.a1
pyrus_communis	pycom17g23060
rosa_chinensis	RchiOBHm_Chr2g0132121
rosa_laevigata	RLG00000019229
rosa_multiflora	Rmu_sc0002005.1_g000003 Rmu_sc0009538.1_g000018 Rmu_sc0033552.1_g000001
rosa_roxburghii	Rroxscaffold_2G00112380
rosa_rugosa	Rorug02G0302400
rosa_samantha	Rh2AG355500 Rh2BG361600 Rh2CG339000
rosa_wichuraiana	Rw2G028860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1590
AatII	GACGTC	1 cut(s)	45
Acc36I	ACCTGC	3 cut(s)	733, 747, 1492
Acc65I	GGTACC	1 cut(s)	2293
AccB1I	GGYRCC	1 cut(s)	2293
AccBSI	CCGCTC	2 cut(s)	1898, 2022
AccI	GTMKAC	1 cut(s)	1862
AccII	CGCG	1 cut(s)	2315
AciI	CCGC	9 cut(s)	5, 200, 237, 890, 1004, 1896, 2020, 2029, 2313
AclI	AACGTT	1 cut(s)	628
AclWI	GGATC	1 cut(s)	404
AcoI	YGGCCR	1 cut(s)	1263
AcsI	RAATTY	7 cut(s)	362, 377, 1025, 1109, 1943, 2218, 2286
AcuI	CTGAAG	5 cut(s)	422, 936, 1706, 1706, 2213
AcyI	GRCGYC	1 cut(s)	42
AdeI	CACNNNGTG	1 cut(s)	989
AfaI	GTAC	8 cut(s)	126, 151, 518, 578, 752, 1141, 1538, 2295
AfiI	CCNNNNNNNGG	4 cut(s)	84, 424, 935, 2173
AflIII	ACRYGT	1 cut(s)	127
AjnI	CCWGG	3 cut(s)	83, 985, 1346
AjuI	GAANNNNNNNTTGG	2 cut(s)	1428, 1460
AloI	GAACNNNNNNTCC	2 cut(s)	150, 182
Alw26I	GTCTC	2 cut(s)	96, 457
AlwI	GGATC	1 cut(s)	404
AlwNI	CAGNNNCTG	1 cut(s)	1507
AoxI	GGCC	3 cut(s)	1263, 1302, 1927
ApeKI	GCWGC	9 cut(s)	710, 713, 962, 1070, 1149, 1232, 1812, 2213, 2224
ApoI	RAATTY	7 cut(s)	362, 377, 1025, 1109, 1943, 2218, 2286
AseI	ATTAAT	1 cut(s)	837
Asp718I	GGTACC	1 cut(s)	2293
AspS9I	GGNCC	5 cut(s)	1057, 1385, 1610, 1826, 2251
AsuHPI	GGTGA	6 cut(s)	40, 254, 1268, 1502, 2176, 2213
AvaII	GGWCC	5 cut(s)	1057, 1385, 1610, 1826, 2251
AxyI	CCTNAGG	1 cut(s)	2115
BaeGI	GKGCMC	1 cut(s)	2313
BalI	TGGCCA	1 cut(s)	1265
BanI	GGYRCC	1 cut(s)	2293
BauI	CACGAG	1 cut(s)	1227
BbsI	GAAGAC	2 cut(s)	71, 1046
BbvI	GCAGC	9 cut(s)	697, 725, 949, 1057, 1161, 1219, 1799, 2200, 2211
BccI	CCATC	4 cut(s)	123, 350, 1229, 1345
BcgI	CGANNNNNNTGC	2 cut(s)	165, 199
BciT130I	CCWGG	3 cut(s)	85, 987, 1348
BcoDI	GTCTC	2 cut(s)	96, 457
BfaI	CTAG	3 cut(s)	287, 924, 1275
BfmI	CTRYAG	6 cut(s)	405, 591, 711, 740, 1728, 1863
BfuAI	ACCTGC	3 cut(s)	733, 747, 1492
BglII	AGATCT	1 cut(s)	508
BisI	GCNGC	9 cut(s)	711, 714, 963, 1071, 1150, 1233, 1813, 2214, 2225
BlsI	GCNGC	9 cut(s)	712, 715, 964, 1072, 1151, 1234, 1814, 2215, 2226
Bme1390I	CCNGG	3 cut(s)	85, 987, 1348
Bme18I	GGWCC	5 cut(s)	1057, 1385, 1610, 1826, 2251
BmgT120I	GGNCC	5 cut(s)	1057, 1385, 1610, 1826, 2251
BmiI	GGNNCC	5 cut(s)	1171, 1611, 2098, 2253, 2295
BmrFI	CCNGG	3 cut(s)	85, 987, 1348
BmrI	ACTGGG	1 cut(s)	945
BmsI	GCATC	8 cut(s)	4, 664, 784, 806, 1297, 1396, 2003, 2339
BmuI	ACTGGG	1 cut(s)	945
BpiI	GAAGAC	2 cut(s)	71, 1046
BplI	GAGNNNNNCTC	2 cut(s)	1346, 1378
BpmI	CTGGAG	1 cut(s)	1529
BpuEI	CTTGAG	4 cut(s)	202, 443, 533, 2060
Bsa29I	ATCGAT	1 cut(s)	1578
BsaAI	YACGTR	1 cut(s)	832
BsaBI	GATNNNNATC	2 cut(s)	96, 114
BsaHI	GRCGYC	1 cut(s)	42
BsaJI	CCNNGG	5 cut(s)	83, 84, 848, 1816, 2142
BsaWI	WCCGGW	1 cut(s)	56
Bsc4I	CCNNNNNNNGG	4 cut(s)	84, 424, 935, 2173
Bse118I	RCCGGY	1 cut(s)	68
Bse1I	ACTGG	6 cut(s)	761, 940, 1044, 1266, 1530, 2084
Bse21I	CCTNAGG	1 cut(s)	2115
Bse3DI	GCAATG	1 cut(s)	2066
Bse8I	GATNNNNATC	2 cut(s)	96, 114
BseBI	CCWGG	3 cut(s)	85, 987, 1348
BseCI	ATCGAT	1 cut(s)	1578
BseDI	CCNNGG	5 cut(s)	83, 84, 848, 1816, 2142
BseGI	GGATG	6 cut(s)	828, 854, 1356, 1378, 1462, 2018
BseJI	GATNNNNATC	2 cut(s)	96, 114
BseLI	CCNNNNNNNGG	4 cut(s)	84, 424, 935, 2173
BseMI	GCAATG	1 cut(s)	2066
BseMII	CTCAG	7 cut(s)	135, 661, 1227, 1710, 2037, 2106, 2159
BseNI	ACTGG	6 cut(s)	761, 940, 1044, 1266, 1530, 2084
BseRI	GAGGAG	1 cut(s)	494
BseSI	GKGCMC	1 cut(s)	2313
BseXI	GCAGC	9 cut(s)	697, 725, 949, 1057, 1161, 1219, 1799, 2200, 2211
BsgI	GTGCAG	1 cut(s)	2175
Bsh1236I	CGCG	1 cut(s)	2315
BshFI	GGCC	3 cut(s)	1265, 1304, 1929
BshNI	GGYRCC	1 cut(s)	2293
BshVI	ATCGAT	1 cut(s)	1578
BsiSI	CCGG	2 cut(s)	57, 69
BslFI	GGGAC	2 cut(s)	506, 960
BslI	CCNNNNNNNGG	4 cut(s)	84, 424, 935, 2173
BsmAI	GTCTC	2 cut(s)	96, 457
BsmBI	CGTCTC	1 cut(s)	96
BsmFI	GGGAC	2 cut(s)	506, 960
BsnI	GGCC	3 cut(s)	1265, 1304, 1929
Bsp1286I	GDGCHC	1 cut(s)	2313
Bsp1407I	TGTACA	2 cut(s)	124, 1536
Bsp143I	GATC	5 cut(s)	409, 508, 1180, 1579, 1660
Bsp19I	CCATGG	2 cut(s)	848, 1816
BspACI	CCGC	9 cut(s)	5, 200, 237, 890, 1004, 1896, 2020, 2029, 2313
BspANI	GGCC	3 cut(s)	1265, 1304, 1929
BspCNI	CTCAG	7 cut(s)	136, 660, 1228, 1709, 2036, 2107, 2160
BspDI	ATCGAT	1 cut(s)	1578
BspFNI	CGCG	1 cut(s)	2315
BspHI	TCATGA	1 cut(s)	1177
BspLI	GGNNCC	5 cut(s)	1171, 1611, 2098, 2253, 2295
BspMAI	CTGCAG	2 cut(s)	715, 744
BspMI	ACCTGC	3 cut(s)	733, 747, 1492
BspPI	GGATC	1 cut(s)	404
BspQI	GCTCTTC	1 cut(s)	276
BspT107I	GGYRCC	1 cut(s)	2293
BsrBI	CCGCTC	2 cut(s)	1898, 2022
BsrDI	GCAATG	1 cut(s)	2066
BsrFI	RCCGGY	1 cut(s)	68
BsrGI	TGTACA	2 cut(s)	124, 1536
BsrI	ACTGG	6 cut(s)	761, 940, 1044, 1266, 1530, 2084
BssAI	RCCGGY	1 cut(s)	68
BssECI	CCNNGG	5 cut(s)	83, 84, 848, 1816, 2142
BssMI	GATC	5 cut(s)	409, 508, 1180, 1579, 1660
BssNI	GRCGYC	1 cut(s)	42
BssSI	CACGAG	1 cut(s)	1227
BssT1I	CCWWGG	3 cut(s)	848, 1816, 2142
Bst2BI	CACGAG	1 cut(s)	1227
Bst2UI	CCWGG	3 cut(s)	85, 987, 1348
Bst4CI	ACNGT	9 cut(s)	406, 548, 755, 804, 1090, 1106, 1144, 1621, 1867
Bst6I	CTCTTC	5 cut(s)	24, 276, 441, 1200, 1277
BstACI	GRCGYC	1 cut(s)	42
BstAUI	TGTACA	2 cut(s)	124, 1536
BstBAI	YACGTR	1 cut(s)	832
BstC8I	GCNNGC	2 cut(s)	789, 2313
BstDEI	CTNAG	8 cut(s)	144, 647, 1236, 1696, 1704, 2023, 2115, 2168
BstDSI	CCRYGG	2 cut(s)	848, 1816
BstF5I	GGATG	6 cut(s)	828, 854, 1356, 1378, 1462, 2018
BstFNI	CGCG	1 cut(s)	2315
BstKTI	GATC	5 cut(s)	412, 511, 1183, 1582, 1663
BstMAI	GTCTC	2 cut(s)	96, 457
BstMBI	GATC	5 cut(s)	409, 508, 1180, 1579, 1660
BstMWI	GCNNNNNNNGC	3 cut(s)	659, 896, 1809
BstNI	CCWGG	3 cut(s)	85, 987, 1348
BstNSI	RCATGY	2 cut(s)	131, 791
BstSCI	CCNGG	3 cut(s)	83, 985, 1346
BstSFI	CTRYAG	6 cut(s)	405, 591, 711, 740, 1728, 1863
BstSLI	GKGCMC	1 cut(s)	2313
BstSNI	TACGTA	1 cut(s)	832
BstUI	CGCG	1 cut(s)	2315
BstV1I	GCAGC	9 cut(s)	697, 725, 949, 1057, 1161, 1219, 1799, 2200, 2211
BstV2I	GAAGAC	2 cut(s)	71, 1046
BstX2I	RGATCY	2 cut(s)	409, 508
BstXI	CCANNNNNNTGG	1 cut(s)	1823
BstYI	RGATCY	2 cut(s)	409, 508
Bsu15I	ATCGAT	1 cut(s)	1578
Bsu36I	CCTNAGG	1 cut(s)	2115
BsuRI	GGCC	3 cut(s)	1265, 1304, 1929
BsuTUI	ATCGAT	1 cut(s)	1578
BtgI	CCRYGG	2 cut(s)	848, 1816
BtsCI	GGATG	6 cut(s)	828, 854, 1356, 1378, 1462, 2018
BtsI	GCAGTG	1 cut(s)	2236
BtsIMutI	CAGTG	8 cut(s)	655, 1086, 1111, 1170, 1523, 1872, 2031, 2236
BveI	ACCTGC	3 cut(s)	733, 747, 1492
Cac8I	GCNNGC	2 cut(s)	789, 2313
CaiI	CAGNNNCTG	1 cut(s)	1507
CciI	TCATGA	1 cut(s)	1177
Cfr10I	RCCGGY	1 cut(s)	68
Cfr13I	GGNCC	5 cut(s)	1057, 1385, 1610, 1826, 2251
ClaI	ATCGAT	1 cut(s)	1578
CseI	GACGC	1 cut(s)	317
CsiI	ACCWGGT	1 cut(s)	985
Csp6I	GTAC	8 cut(s)	125, 150, 517, 577, 751, 1140, 1537, 2294
CviQI	GTAC	8 cut(s)	125, 150, 517, 577, 751, 1140, 1537, 2294
DdeI	CTNAG	8 cut(s)	144, 647, 1236, 1696, 1704, 2023, 2115, 2168
DpnI	GATC	5 cut(s)	411, 510, 1182, 1581, 1662
DpnII	GATC	5 cut(s)	409, 508, 1180, 1579, 1660
DraIII	CACNNNGTG	1 cut(s)	989
EaeI	YGGCCR	1 cut(s)	1263
Eam1104I	CTCTTC	5 cut(s)	24, 276, 441, 1200, 1277
EarI	CTCTTC	5 cut(s)	24, 276, 441, 1200, 1277
EciI	GGCGGA	1 cut(s)	20
Eco105I	TACGTA	1 cut(s)	832
Eco130I	CCWWGG	3 cut(s)	848, 1816, 2142
Eco32I	GATATC	1 cut(s)	214
Eco47I	GGWCC	5 cut(s)	1057, 1385, 1610, 1826, 2251
Eco57I	CTGAAG	5 cut(s)	422, 936, 1706, 1706, 2213
Eco81I	CCTNAGG	1 cut(s)	2115
EcoO109I	RGGNCCY	1 cut(s)	1610
EcoRI	GAATTC	2 cut(s)	377, 1109
EcoRII	CCWGG	3 cut(s)	83, 985, 1346
EcoRV	GATATC	1 cut(s)	214
EcoT14I	CCWWGG	3 cut(s)	848, 1816, 2142
EcoT22I	ATGCAT	1 cut(s)	799
ErhI	CCWWGG	3 cut(s)	848, 1816, 2142
Esp3I	CGTCTC	1 cut(s)	96
FalI	AAGNNNNNCTT	4 cut(s)	495, 527, 1395, 1427
FaqI	GGGAC	2 cut(s)	506, 960
FauI	CCCGC	3 cut(s)	193, 1011, 2320
FauNDI	CATATG	2 cut(s)	1390, 1399
FblI	GTMKAC	1 cut(s)	1862
Fnu4HI	GCNGC	9 cut(s)	711, 714, 963, 1071, 1150, 1233, 1813, 2214, 2225
FokI	GGATG	6 cut(s)	835, 841, 1363, 1385, 1469, 2025
Fsp4HI	GCNGC	9 cut(s)	711, 714, 963, 1071, 1150, 1233, 1813, 2214, 2225
FspBI	CTAG	3 cut(s)	287, 924, 1275
GluI	GCNGC	9 cut(s)	711, 714, 963, 1071, 1150, 1233, 1813, 2214, 2225
GsuI	CTGGAG	1 cut(s)	1529
HaeIII	GGCC	3 cut(s)	1265, 1304, 1929
HapII	CCGG	2 cut(s)	57, 69
HgaI	GACGC	1 cut(s)	317
Hin1I	GRCGYC	1 cut(s)	42
HincII	GTYRAC	1 cut(s)	2134
HindII	GTYRAC	1 cut(s)	2134
HindIII	AAGCTT	1 cut(s)	490
HinfI	GANTC	9 cut(s)	191, 245, 844, 893, 1121, 1334, 1361, 1572, 1778
HpaII	CCGG	2 cut(s)	57, 69
HphI	GGTGA	6 cut(s)	40, 254, 1268, 1502, 2176, 2213
Hpy166II	GTNNAC	4 cut(s)	152, 1537, 1863, 2134
Hpy188I	TCNGA	5 cut(s)	267, 1204, 1339, 1699, 2232
Hpy8I	GTNNAC	4 cut(s)	152, 1537, 1863, 2134
Hpy99I	CGWCG	1 cut(s)	177
HpyAV	CCTTC	2 cut(s)	937, 2144
HpyCH4III	ACNGT	9 cut(s)	406, 548, 755, 804, 1090, 1106, 1144, 1621, 1867
HpyCH4IV	ACGT	4 cut(s)	42, 519, 628, 831
HpyF10VI	GCNNNNNNNGC	3 cut(s)	659, 896, 1809
HpyF3I	CTNAG	8 cut(s)	144, 647, 1236, 1696, 1704, 2023, 2115, 2168
HpySE526I	ACGT	4 cut(s)	42, 519, 628, 831
Hsp92I	GRCGYC	1 cut(s)	42
KpnI	GGTACC	1 cut(s)	2297
Kzo9I	GATC	5 cut(s)	409, 508, 1180, 1579, 1660
LguI	GCTCTTC	1 cut(s)	276
LmnI	GCTCC	8 cut(s)	271, 640, 784, 1510, 1567, 1971, 2096, 2341
Lsp1109I	GCAGC	9 cut(s)	697, 725, 949, 1057, 1161, 1219, 1799, 2200, 2211
LweI	GCATC	8 cut(s)	4, 664, 784, 806, 1297, 1396, 2003, 2339
MabI	ACCWGGT	1 cut(s)	985
MaeI	CTAG	3 cut(s)	287, 924, 1275
MaeII	ACGT	4 cut(s)	42, 519, 628, 831
MalI	GATC	5 cut(s)	411, 510, 1182, 1581, 1662
MbiI	CCGCTC	2 cut(s)	1898, 2022
MboI	GATC	5 cut(s)	409, 508, 1180, 1579, 1660
MflI	RGATCY	2 cut(s)	409, 508
MhlI	GDGCHC	1 cut(s)	2313
MlsI	TGGCCA	1 cut(s)	1265
MluNI	TGGCCA	1 cut(s)	1265
MlyI	GAGTC	4 cut(s)	853, 1328, 1355, 1581
MmeI	TCCRAC	3 cut(s)	193, 649, 1338
Mox20I	TGGCCA	1 cut(s)	1265
Mph1103I	ATGCAT	1 cut(s)	799
MscI	TGGCCA	1 cut(s)	1265
MseI	TTAA	9 cut(s)	462, 705, 779, 837, 1095, 1478, 1629, 2076, 2258
MslI	CAYNNNNRTG	1 cut(s)	792
Msp20I	TGGCCA	1 cut(s)	1265
MspA1I	CMGCKG	1 cut(s)	239
MspI	CCGG	2 cut(s)	57, 69
MspR9I	CCNGG	3 cut(s)	85, 987, 1348
MvaI	CCWGG	3 cut(s)	85, 987, 1348
MvnI	CGCG	1 cut(s)	2315
MwoI	GCNNNNNNNGC	3 cut(s)	659, 896, 1809
NcoI	CCATGG	2 cut(s)	848, 1816
NdeI	CATATG	2 cut(s)	1390, 1399
NdeII	GATC	5 cut(s)	409, 508, 1180, 1579, 1660
NlaIV	GGNNCC	5 cut(s)	1171, 1611, 2098, 2253, 2295
NmeAIII	GCCGAG	1 cut(s)	679
NmuCI	GTSAC	3 cut(s)	249, 1256, 2201
NsiI	ATGCAT	1 cut(s)	799
NspI	RCATGY	2 cut(s)	131, 791
PaeI	GCATGC	1 cut(s)	791
PagI	TCATGA	1 cut(s)	1177
PasI	CCCWGGG	1 cut(s)	84
PciI	ACATGT	1 cut(s)	127
PciSI	GCTCTTC	1 cut(s)	276
PfeI	GAWTC	5 cut(s)	191, 245, 893, 1121, 1778
PkrI	GCNGC	9 cut(s)	712, 715, 964, 1072, 1151, 1234, 1814, 2215, 2226
PleI	GAGTC	4 cut(s)	852, 1328, 1355, 1580
PpsI	GAGTC	4 cut(s)	852, 1328, 1355, 1580
Ppu21I	YACGTR	1 cut(s)	832
PpuMI	RGGWCCY	1 cut(s)	1610
PscI	ACATGT	1 cut(s)	127
PshBI	ATTAAT	1 cut(s)	837
PsiI	TTATAA	1 cut(s)	1590
Psp1406I	AACGTT	1 cut(s)	628
Psp5II	RGGWCCY	1 cut(s)	1610
Psp6I	CCWGG	3 cut(s)	83, 985, 1346
PspGI	CCWGG	3 cut(s)	83, 985, 1346
PspN4I	GGNNCC	5 cut(s)	1171, 1611, 2098, 2253, 2295
PspPI	GGNCC	5 cut(s)	1057, 1385, 1610, 1826, 2251
PspPPI	RGGWCCY	1 cut(s)	1610
PstI	CTGCAG	2 cut(s)	715, 744
PstNI	CAGNNNCTG	1 cut(s)	1507
PsuI	RGATCY	2 cut(s)	409, 508
RsaI	GTAC	8 cut(s)	126, 151, 518, 578, 752, 1141, 1538, 2295
RsaNI	GTAC	8 cut(s)	125, 150, 517, 577, 751, 1140, 1537, 2294
RseI	CAYNNNNRTG	1 cut(s)	792
SapI	GCTCTTC	1 cut(s)	276
SaqAI	TTAA	9 cut(s)	462, 705, 779, 837, 1095, 1478, 1629, 2076, 2258
SatI	GCNGC	9 cut(s)	711, 714, 963, 1071, 1150, 1233, 1813, 2214, 2225
Sau3AI	GATC	5 cut(s)	409, 508, 1180, 1579, 1660
Sau96I	GGNCC	5 cut(s)	1057, 1385, 1610, 1826, 2251
SbfI	CCTGCAGG	1 cut(s)	744
SchI	GAGTC	4 cut(s)	853, 1328, 1355, 1581
ScrFI	CCNGG	3 cut(s)	85, 987, 1348
SdaI	CCTGCAGG	1 cut(s)	744
SduI	GDGCHC	1 cut(s)	2313
SexAI	ACCWGGT	1 cut(s)	985
SfaNI	GCATC	8 cut(s)	4, 664, 784, 806, 1297, 1396, 2003, 2339
SfcI	CTRYAG	6 cut(s)	405, 591, 711, 740, 1728, 1863
SinI	GGWCC	5 cut(s)	1057, 1385, 1610, 1826, 2251
SmiMI	CAYNNNNRTG	1 cut(s)	792
SmlI	CTYRAG	4 cut(s)	217, 422, 512, 2039
SmoI	CTYRAG	4 cut(s)	217, 422, 512, 2039
SnaBI	TACGTA	1 cut(s)	832
SphI	GCATGC	1 cut(s)	791
Sse8387I	CCTGCAGG	1 cut(s)	744
SsiI	CCGC	9 cut(s)	5, 200, 237, 890, 1004, 1896, 2020, 2029, 2313
SspI	AATATT	1 cut(s)	2337
SspMI	CTAG	3 cut(s)	287, 924, 1275
StyD4I	CCNGG	3 cut(s)	83, 985, 1346
StyI	CCWWGG	3 cut(s)	848, 1816, 2142
TaaI	ACNGT	9 cut(s)	406, 548, 755, 804, 1090, 1106, 1144, 1621, 1867
TaiI	ACGT	4 cut(s)	45, 522, 631, 834
TaqI	TCGA	6 cut(s)	100, 118, 598, 1570, 1578, 1663
TatI	WGTACW	4 cut(s)	124, 149, 1139, 1536
TfiI	GAWTC	5 cut(s)	191, 245, 893, 1121, 1778
Tru1I	TTAA	9 cut(s)	462, 705, 779, 837, 1095, 1478, 1629, 2076, 2258
Tru9I	TTAA	9 cut(s)	462, 705, 779, 837, 1095, 1478, 1629, 2076, 2258
TscAI	CASTG	8 cut(s)	655, 1093, 1111, 1170, 1530, 1872, 2031, 2243
TseFI	GTSAC	3 cut(s)	249, 1256, 2201
TseI	GCWGC	9 cut(s)	710, 713, 962, 1070, 1149, 1232, 1812, 2213, 2224
Tsp45I	GTSAC	3 cut(s)	249, 1256, 2201
TspDTI	ATGAA	8 cut(s)	86, 183, 355, 390, 879, 1407, 1416, 1989
TspGWI	ACGGA	3 cut(s)	120, 2067, 2264
TspRI	CASTG	8 cut(s)	655, 1093, 1111, 1170, 1530, 1872, 2031, 2243
VpaK11BI	GGWCC	5 cut(s)	1057, 1385, 1610, 1826, 2251
VspI	ATTAAT	1 cut(s)	837
XapI	RAATTY	7 cut(s)	362, 377, 1025, 1109, 1943, 2218, 2286
XceI	RCATGY	2 cut(s)	131, 791
XmiI	GTMKAC	1 cut(s)	1862
XspI	CTAG	3 cut(s)	287, 924, 1275
ZraI	GACGTC	1 cut(s)	43
Zsp2I	ATGCAT	1 cut(s)	799

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.