Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0009385

Physical Location & Seq

Genomic Coordinates Forward (+)

21685423 .. 21697325

Gene Structure 11903 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g28160.t4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2355 bp

ATGGCGGAAGTTGATGCTCATATCCAAGAAGAACACTTTGACGTTCTCACCAAAACCGGTCAGAAGACCGGCACTTCTAAGCCCAGGGGAGCTGTGCATCGAGACGGCGATTACCACCGAGCTGTTCATGTGTGGATTTTCGCCGAGAGCACACAAGAGCTGCTTGTCCAAAAACGTGCCGACGATAAGGATTCCTGGGCTGGCTTGTGGGATATCTCCAGTGCTGGACATATATCTGCTGGTGACTCTTCGCTCATCTCTGCCCGGAGGGAGCTTGAAGAGGAGCTAGGTATAATACTTCCAAAAGATGCATTTGAAATGATATTCGTATTTCTTCAAGAGTGTGTAATAAATGATGGAAAATTCATCAATAATGAATTCAATGATGTGTACTTGGTTACAACTCTAGATCCTATCCCTCTTGAGGCATTTACTCTTCAGGAAACAGAAGTCTCTGCTGTTAAATATATAGCTTATGAGGAGTATAAAAGCTTACTAGCTAAAGAAGATCCTGATTACGTACCATATGATGTAAATGGGCAGTATGGTCAGCTGTTTGACATGATTGCACAGAGGTACAAGAAGAACAATACAGCTCGAAGTTTGTCACTGCAAAAGCAACTCCAACGTTATGCTCCTGTTACCCTCAATGCAGAGCTGACAGGCCTCACAGATGCAGATAAGGAGGCTCTTGTTATACTTGTAAAGGCTGCAACAATTTTGGATAAAATATTTCACCTGCAGGTGTGGTACAGTAATCCAGCTCTAAGAGATTGGTTGAAGGAGCACGCAGATGTATCACAAATGGACAAGTTGAAATGGATGTATTATTTAATTAATAAGAGTCCATGGTCAGACCTTGATGAAAACGAGGCATTTTTGACAACTGCAGACTCAGCTGTGAAGTTGCTTCCTGAAGCAACAAAACCTGTTACTGGGTGGAAGGGACTTGAATATAGAGCTGCATTTCCTATGCTAAAACCACCTGGGGCAAACTTCTATCCTCCAGATATGGACAAAACGGAATTTGAAATGTGGAAGAGTAGTCTAACAGTAGACCAACAAGAAGATGCAACAGGCTTTTTCAATGTTATTAAAAGACACAGTGAATCTAGTCTAGGTTCCACTGTAAATTGTAACACAGGAGGAAGCAAAGATCATTCTGTGGGTTTGATACCTGACTTGTACACTGTCCCTTTCTCCCAAGAGTACAATACTTTCCTCACACGAGCAGCTGAATTATTGCATAAAGCGGGTGACTTAGCCAGTTCACCAAGTTTGAAGAGGTTGCTTCACAGCAAGGGTGATGCTTTCCTTTCAAATGATTACTATGACTCAGATATAGCCTGGATGGAGTTGGACTCTAAGCTCGATGTCACTATTGGTCCATATGAAACATATGAAGATGCACTGTTCGGGTACAAGGCTACATTTGAAGTGTTTATTGGAGTTCGGGATGACCAAGCAACAGCTCAGCTAAAACTTTTTGGTGATAACTTGCAGGTTTTAGAGCAAAATCTCCCACTAGACGATGTCTATAAGTCCAAGGAAGTAATTTCTGCTCCTATCCGAGTTATCGAGCTTGTTTATAATGCTGGAGATGTAAAGGGCCCTCAAACTGTTGCTTTCAATCTACCAAATGATGAGCGTATTGTAAAAGATCGAGGAACATCTATGGTCATGCTTAAGAATGTCTCAGAGGCGAAGTTCAAACATATCCTTCTGCCTATAGCTGATGTTTGTATCACAAAGGAACAACAAGAACTTGTAGATTTTGAATCCTTCTTCACTCACACAATTTGCCATGAATGCTGCCATGGGATTGGACCTCATAGCATAACACTTCCAAATGGTAGAAAGTCTACAGTGAGATTGGAACTGCAAGAACTCCACTCAGCTTTGGAAGAAGCAAAAGCTGATATAGTTGGCCTGTGGGCCCTGAAATTCTTGATCCACAAGGAACTGCTCCCGAAGAGCTTATTGAAATCCATGTATGTTTCTTTTCTTGCTGGATGCTTCCGCTCAGTTCGGTTCGGTCTGGAAGAAGCTCATGGAAAAGGACAGGCATTGCAGTTTAACTGGTTGTACGAGCAAGGAGCCTTTATATTGAATCCTGATGATACATTTTCTGTTGACTTTGACAAGGTTGAAGGTGCGGTTGAGAGCCTGAGTAGGGAGATACTTACCATACAAGCAAAAGGTGACAAAGAGGCTGCAAATTTGCTTCTTCAGAAATACTGCACAATGACAGACCCATTAAAAGTTGCTTTGCAGCGATTAGAAAATGTTCAGGTACCTGTGGATATAGTTCCCAGATTTCCGGTGGCTGAGAATATTTTGACTCATAATCACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004177 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005829 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008238 GO:0008239 GO:0016787 GO:0019538 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NUDIX Peptidase_M49

Protein Analysis

785

Amino Acids

88.41

Weight (kDa)

5.04

Isoelectric Point (pI)

36.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NUDIX	PF00293	38 - 170	1.2e-13	NUDIX domain
Peptidase_M49	PF03571	403 - 609	1.9e-08	Peptidase family M49

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009385)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79690 AT1G79690
fragaria_vesca	FvH4_6g28160 FvH4_6g28160 FvH4_6g28160 FvH4_6g28160 FvH4_6g28160 FvH4_6g28160
malus_domestica	MD17G1227300.v1.1
prunus_persica	Prupe.3G104700_v2.0.a1
pyrus_communis	pycom17g23060
rosa_chinensis	RchiOBHm_Chr2g0132121
rosa_laevigata	RLG00000019229
rosa_multiflora	Rmu_sc0002005.1_g000003 Rmu_sc0009538.1_g000018 Rmu_sc0033552.1_g000001
rosa_roxburghii	Rroxscaffold_2G00112380
rosa_rugosa	Rorug02G0302400
rosa_samantha	Rh2AG355500 Rh2BG361600 Rh2CG339000
rosa_wichuraiana	Rw2G028860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1590
AarI	CACCTGC	2 cut(s)	733, 747
Acc36I	ACCTGC	3 cut(s)	733, 747, 1492
Acc65I	GGTACC	1 cut(s)	2293
AccB1I	GGYRCC	1 cut(s)	2293
AccBSI	CCGCTC	1 cut(s)	2022
AccI	GTMKAC	2 cut(s)	1056, 1862
AciI	CCGC	4 cut(s)	5, 1253, 2020, 2156
AclI	AACGTT	1 cut(s)	628
AclWI	GGATC	3 cut(s)	404, 503, 1945
AcsI	RAATTY	5 cut(s)	362, 377, 1025, 1943, 2218
AcuI	CTGAAG	3 cut(s)	422, 936, 2213
AfaI	GTAC	9 cut(s)	392, 522, 578, 752, 1187, 1211, 1421, 2087, 2295
AfiI	CCNNNNNNNGG	3 cut(s)	424, 935, 2173
AflII	CTTAAG	1 cut(s)	1685
AgeI	ACCGGT	1 cut(s)	56
AjnI	CCWGG	4 cut(s)	83, 194, 985, 1346
AjuI	GAANNNNNNNTTGG	2 cut(s)	1428, 1460
Alw21I	GWGCWC	2 cut(s)	152, 789
Alw26I	GTCTC	3 cut(s)	96, 457, 1699
AlwI	GGATC	3 cut(s)	404, 503, 1945
AoxI	GGCC	4 cut(s)	664, 1609, 1927, 1935
ApaI	GGGCCC	2 cut(s)	1613, 1939
ApeKI	GCWGC	7 cut(s)	160, 710, 962, 1232, 1812, 2213, 2272
ApoI	RAATTY	5 cut(s)	362, 377, 1025, 1943, 2218
AseI	ATTAAT	1 cut(s)	837
AsiGI	ACCGGT	1 cut(s)	56
Asp700I	GAANNNNTTC	1 cut(s)	2286
Asp718I	GGTACC	1 cut(s)	2293
AspS9I	GGNCC	6 cut(s)	1385, 1609, 1610, 1826, 1935, 1936
AsuC2I	CCSGG	1 cut(s)	265
AsuHPI	GGTGA	8 cut(s)	40, 254, 728, 1263, 1268, 1316, 1502, 2213
AvaII	GGWCC	2 cut(s)	1385, 1826
BaeGI	GKGCMC	2 cut(s)	1613, 1939
BanI	GGYRCC	1 cut(s)	2293
BanII	GRGCYC	2 cut(s)	1613, 1939
BauI	CACGAG	1 cut(s)	1227
BbsI	GAAGAC	1 cut(s)	71
Bbv12I	GWGCWC	2 cut(s)	152, 789
BbvI	GCAGC	7 cut(s)	147, 697, 949, 1244, 1799, 2200, 2284
BccI	CCATC	2 cut(s)	350, 1345
BceAI	ACGGC	1 cut(s)	121
BciT130I	CCWGG	4 cut(s)	85, 196, 987, 1348
BcnI	CCSGG	1 cut(s)	265
BcoDI	GTCTC	3 cut(s)	96, 457, 1699
BfaI	CTAG	6 cut(s)	287, 407, 497, 1113, 1118, 1526
BfmI	CTRYAG	4 cut(s)	740, 888, 1728, 1863
BfrI	CTTAAG	1 cut(s)	1685
BfuAI	ACCTGC	3 cut(s)	733, 747, 1492
BisI	GCNGC	7 cut(s)	161, 711, 963, 1233, 1813, 2214, 2273
BlpI	GCTNAGC	1 cut(s)	1473
BlsI	GCNGC	7 cut(s)	162, 712, 964, 1234, 1814, 2215, 2274
Bme1390I	CCNGG	5 cut(s)	85, 196, 265, 987, 1348
Bme18I	GGWCC	2 cut(s)	1385, 1826
BmgT120I	GGNCC	6 cut(s)	1385, 1609, 1610, 1826, 1935, 1936
BmiI	GGNNCC	5 cut(s)	1123, 1611, 1937, 2098, 2295
BmrFI	CCNGG	5 cut(s)	85, 196, 265, 987, 1348
BmrI	ACTGGG	1 cut(s)	945
BmsI	GCATC	8 cut(s)	4, 106, 298, 664, 1060, 1297, 1396, 2003
BmuI	ACTGGG	1 cut(s)	945
BpiI	GAAGAC	1 cut(s)	71
BplI	GAGNNNNNCTC	2 cut(s)	1346, 1378
BpmI	CTGGAG	3 cut(s)	202, 990, 1617
Bpu1102I	GCTNAGC	1 cut(s)	1473
BpuEI	CTTGAG	1 cut(s)	443
BpuMI	CCSGG	1 cut(s)	265
BsaAI	YACGTR	1 cut(s)	520
BsaJI	CCNNGG	7 cut(s)	83, 84, 195, 848, 986, 1545, 1816
BsaWI	WCCGGW	2 cut(s)	56, 2320
Bsc4I	CCNNNNNNNGG	3 cut(s)	424, 935, 2173
Bse118I	RCCGGY	2 cut(s)	56, 68
Bse1I	ACTGG	4 cut(s)	219, 940, 1266, 2084
Bse3DI	GCAATG	1 cut(s)	2066
BseBI	CCWGG	4 cut(s)	85, 196, 987, 1348
BseDI	CCNNGG	7 cut(s)	83, 84, 195, 848, 986, 1545, 1816
BseGI	GGATG	4 cut(s)	828, 1356, 1462, 2018
BseLI	CCNNNNNNNGG	3 cut(s)	424, 935, 2173
BseMI	GCAATG	1 cut(s)	2066
BseMII	CTCAG	8 cut(s)	909, 1350, 1487, 1710, 1908, 2037, 2159, 2319
BseNI	ACTGG	4 cut(s)	219, 940, 1266, 2084
BseRI	GAGGAG	2 cut(s)	296, 494
BseSI	GKGCMC	2 cut(s)	1613, 1939
BseXI	GCAGC	7 cut(s)	147, 697, 949, 1244, 1799, 2200, 2284
BsgI	GTGCAG	1 cut(s)	2224
BshFI	GGCC	4 cut(s)	666, 1611, 1929, 1937
BshNI	GGYRCC	1 cut(s)	2293
BshTI	ACCGGT	1 cut(s)	56
BsiHKAI	GWGCWC	2 cut(s)	152, 789
BsiSI	CCGG	4 cut(s)	57, 69, 265, 2321
BslFI	GGGAC	2 cut(s)	960, 1178
BslI	CCNNNNNNNGG	3 cut(s)	424, 935, 2173
BsmAI	GTCTC	3 cut(s)	96, 457, 1699
BsmBI	CGTCTC	1 cut(s)	96
BsmFI	GGGAC	2 cut(s)	960, 1178
BsmI	GAATGC	1 cut(s)	1814
BsnI	GGCC	4 cut(s)	666, 1611, 1929, 1937
Bsp120I	GGGCCC	2 cut(s)	1609, 1935
Bsp1286I	GDGCHC	4 cut(s)	152, 789, 1613, 1939
Bsp1407I	TGTACA	1 cut(s)	1185
Bsp143I	GATC	5 cut(s)	409, 508, 1156, 1660, 1950
Bsp1720I	GCTNAGC	1 cut(s)	1473
Bsp19I	CCATGG	2 cut(s)	848, 1816
BspACI	CCGC	4 cut(s)	5, 1253, 2020, 2156
BspANI	GGCC	4 cut(s)	666, 1611, 1929, 1937
BspCNI	CTCAG	8 cut(s)	908, 1349, 1486, 1709, 1907, 2036, 2160, 2320
BspLI	GGNNCC	5 cut(s)	1123, 1611, 1937, 2098, 2295
BspMAI	CTGCAG	2 cut(s)	744, 892
BspMI	ACCTGC	3 cut(s)	733, 747, 1492
BspPI	GGATC	3 cut(s)	404, 503, 1945
BspQI	GCTCTTC	1 cut(s)	1967
BspT107I	GGYRCC	1 cut(s)	2293
BspTI	CTTAAG	1 cut(s)	1685
BsrBI	CCGCTC	1 cut(s)	2022
BsrDI	GCAATG	1 cut(s)	2066
BsrFI	RCCGGY	2 cut(s)	56, 68
BsrGI	TGTACA	1 cut(s)	1185
BsrI	ACTGG	4 cut(s)	219, 940, 1266, 2084
BssAI	RCCGGY	2 cut(s)	56, 68
BssECI	CCNNGG	7 cut(s)	83, 84, 195, 848, 986, 1545, 1816
BssMI	GATC	5 cut(s)	409, 508, 1156, 1660, 1950
BssSI	CACGAG	1 cut(s)	1227
BssT1I	CCWWGG	3 cut(s)	848, 1545, 1816
Bst2BI	CACGAG	1 cut(s)	1227
Bst2UI	CCWGG	4 cut(s)	85, 196, 987, 1348
Bst4CI	ACNGT	8 cut(s)	755, 1054, 1106, 1129, 1192, 1413, 1621, 1867
Bst6I	CTCTTC	6 cut(s)	253, 273, 441, 1034, 1277, 1967
BstAFI	CTTAAG	1 cut(s)	1685
BstAUI	TGTACA	1 cut(s)	1185
BstBAI	YACGTR	1 cut(s)	520
BstC8I	GCNNGC	2 cut(s)	202, 789
BstDSI	CCRYGG	2 cut(s)	848, 1816
BstF5I	GGATG	4 cut(s)	828, 1356, 1462, 2018
BstKTI	GATC	5 cut(s)	412, 511, 1159, 1663, 1953
BstMAI	GTCTC	3 cut(s)	96, 457, 1699
BstMBI	GATC	5 cut(s)	409, 508, 1156, 1660, 1950
BstMWI	GCNNNNNNNGC	2 cut(s)	896, 1809
BstNI	CCWGG	4 cut(s)	85, 196, 987, 1348
BstSCI	CCNGG	5 cut(s)	83, 194, 263, 985, 1346
BstSFI	CTRYAG	4 cut(s)	740, 888, 1728, 1863
BstSLI	GKGCMC	2 cut(s)	1613, 1939
BstSNI	TACGTA	1 cut(s)	520
BstV1I	GCAGC	7 cut(s)	147, 697, 949, 1244, 1799, 2200, 2284
BstV2I	GAAGAC	1 cut(s)	71
BstX2I	RGATCY	2 cut(s)	409, 508
BstXI	CCANNNNNNTGG	1 cut(s)	1823
BstYI	RGATCY	2 cut(s)	409, 508
BsuRI	GGCC	4 cut(s)	666, 1611, 1929, 1937
BtgI	CCRYGG	2 cut(s)	848, 1816
BtsCI	GGATG	4 cut(s)	828, 1356, 1462, 2018
BtsI	GCAGTG	1 cut(s)	608
BtsIMutI	CAGTG	7 cut(s)	226, 608, 1111, 1125, 1188, 1409, 1872
BveI	ACCTGC	3 cut(s)	733, 747, 1492
Cac8I	GCNNGC	2 cut(s)	202, 789
Cfr10I	RCCGGY	2 cut(s)	56, 68
Cfr13I	GGNCC	6 cut(s)	1385, 1609, 1610, 1826, 1935, 1936
Csp6I	GTAC	9 cut(s)	391, 521, 577, 751, 1186, 1210, 1420, 2086, 2294
CspAI	ACCGGT	1 cut(s)	56
CviAII	CATG	8 cut(s)	128, 562, 849, 1681, 1805, 1817, 1990, 2051
CviQI	GTAC	9 cut(s)	391, 521, 577, 751, 1186, 1210, 1420, 2086, 2294
DpnI	GATC	5 cut(s)	411, 510, 1158, 1662, 1952
DpnII	GATC	5 cut(s)	409, 508, 1156, 1660, 1950
Eam1104I	CTCTTC	6 cut(s)	253, 273, 441, 1034, 1277, 1967
EarI	CTCTTC	6 cut(s)	253, 273, 441, 1034, 1277, 1967
EciI	GGCGGA	1 cut(s)	20
Eco105I	TACGTA	1 cut(s)	520
Eco130I	CCWWGG	3 cut(s)	848, 1545, 1816
Eco147I	AGGCCT	1 cut(s)	666
Eco24I	GRGCYC	2 cut(s)	1613, 1939
Eco32I	GATATC	1 cut(s)	214
Eco47I	GGWCC	2 cut(s)	1385, 1826
Eco57I	CTGAAG	3 cut(s)	422, 936, 2213
EcoO109I	RGGNCCY	3 cut(s)	1609, 1610, 1936
EcoRI	GAATTC	1 cut(s)	377
EcoRII	CCWGG	4 cut(s)	83, 194, 985, 1346
EcoRV	GATATC	1 cut(s)	214
EcoT14I	CCWWGG	3 cut(s)	848, 1545, 1816
EcoT22I	ATGCAT	1 cut(s)	313
EcoT38I	GRGCYC	2 cut(s)	1613, 1939
ErhI	CCWWGG	3 cut(s)	848, 1545, 1816
Esp3I	CGTCTC	1 cut(s)	96
FaeI	CATG	8 cut(s)	131, 565, 852, 1684, 1808, 1820, 1993, 2054
FalI	AAGNNNNNCTT	2 cut(s)	147, 179
FaqI	GGGAC	2 cut(s)	960, 1178
FatI	CATG	8 cut(s)	127, 561, 848, 1680, 1804, 1816, 1989, 2050
FauI	CCCGC	1 cut(s)	1246
FauNDI	CATATG	3 cut(s)	526, 1390, 1399
FblI	GTMKAC	2 cut(s)	1056, 1862
Fnu4HI	GCNGC	7 cut(s)	161, 711, 963, 1233, 1813, 2214, 2273
FokI	GGATG	4 cut(s)	835, 1363, 1469, 2025
FriOI	GRGCYC	2 cut(s)	1613, 1939
Fsp4HI	GCNGC	7 cut(s)	161, 711, 963, 1233, 1813, 2214, 2273
FspBI	CTAG	6 cut(s)	287, 407, 497, 1113, 1118, 1526
GluI	GCNGC	7 cut(s)	161, 711, 963, 1233, 1813, 2214, 2273
GsuI	CTGGAG	3 cut(s)	202, 990, 1617
HaeIII	GGCC	4 cut(s)	666, 1611, 1929, 1937
HapII	CCGG	4 cut(s)	57, 69, 265, 2321
Hin1II	CATG	8 cut(s)	131, 565, 852, 1684, 1808, 1820, 1993, 2054
HincII	GTYRAC	1 cut(s)	2134
HindII	GTYRAC	1 cut(s)	2134
HindIII	AAGCTT	1 cut(s)	490
HpaII	CCGG	4 cut(s)	57, 69, 265, 2321
HphI	GGTGA	8 cut(s)	40, 254, 728, 1263, 1268, 1316, 1502, 2213
Hpy166II	GTNNAC	6 cut(s)	391, 1057, 1188, 1271, 1863, 2134
Hpy188I	TCNGA	6 cut(s)	63, 856, 1339, 1571, 1699, 2232
Hpy8I	GTNNAC	6 cut(s)	391, 1057, 1188, 1271, 1863, 2134
Hpy99I	CGWCG	1 cut(s)	185
HpyAV	CCTTC	5 cut(s)	775, 937, 1730, 1792, 2144
HpyCH4III	ACNGT	8 cut(s)	755, 1054, 1106, 1129, 1192, 1413, 1621, 1867
HpyCH4IV	ACGT	4 cut(s)	42, 175, 519, 628
HpyF10VI	GCNNNNNNNGC	2 cut(s)	896, 1809
HpySE526I	ACGT	4 cut(s)	42, 175, 519, 628
Hsp92II	CATG	8 cut(s)	131, 565, 852, 1684, 1808, 1820, 1993, 2054
KpnI	GGTACC	1 cut(s)	2297
Kzo9I	GATC	5 cut(s)	409, 508, 1156, 1660, 1950
LguI	GCTCTTC	1 cut(s)	1967
LmnI	GCTCC	8 cut(s)	89, 271, 283, 640, 784, 1567, 1971, 2096
Lsp1109I	GCAGC	7 cut(s)	147, 697, 949, 1244, 1799, 2200, 2284
LweI	GCATC	8 cut(s)	4, 106, 298, 664, 1060, 1297, 1396, 2003
MaeI	CTAG	6 cut(s)	287, 407, 497, 1113, 1118, 1526
MaeII	ACGT	4 cut(s)	42, 175, 519, 628
MaeIII	GTNAC	9 cut(s)	242, 397, 606, 640, 931, 1136, 1256, 1375, 2201
MalI	GATC	5 cut(s)	411, 510, 1158, 1662, 1952
MbiI	CCGCTC	1 cut(s)	2022
MboI	GATC	5 cut(s)	409, 508, 1156, 1660, 1950
MflI	RGATCY	2 cut(s)	409, 508
MhlI	GDGCHC	4 cut(s)	152, 789, 1613, 1939
MlyI	GAGTC	6 cut(s)	239, 853, 887, 1328, 1355, 2335
MmeI	TCCRAC	2 cut(s)	649, 1338
Mph1103I	ATGCAT	1 cut(s)	313
MroXI	GAANNNNTTC	1 cut(s)	2286
MseI	TTAA	7 cut(s)	462, 833, 837, 1095, 1686, 2076, 2258
MslI	CAYNNNNRTG	1 cut(s)	792
MspA1I	CMGCKG	3 cut(s)	553, 899, 1235
MspCI	CTTAAG	1 cut(s)	1685
MspI	CCGG	4 cut(s)	57, 69, 265, 2321
MspR9I	CCNGG	5 cut(s)	85, 196, 265, 987, 1348
Mva1269I	GAATGC	1 cut(s)	1814
MvaI	CCWGG	4 cut(s)	85, 196, 987, 1348
MwoI	GCNNNNNNNGC	2 cut(s)	896, 1809
NciI	CCSGG	1 cut(s)	265
NcoI	CCATGG	2 cut(s)	848, 1816
NdeI	CATATG	3 cut(s)	526, 1390, 1399
NdeII	GATC	5 cut(s)	409, 508, 1156, 1660, 1950
NlaIII	CATG	8 cut(s)	131, 565, 852, 1684, 1808, 1820, 1993, 2054
NlaIV	GGNNCC	5 cut(s)	1123, 1611, 1937, 2098, 2295
NmeAIII	GCCGAG	1 cut(s)	169
NmuCI	GTSAC	5 cut(s)	242, 606, 1256, 1375, 2201
NsiI	ATGCAT	1 cut(s)	313
PacI	TTAATTAA	1 cut(s)	837
PaqCI	CACCTGC	2 cut(s)	733, 747
PasI	CCCWGGG	1 cut(s)	84
PceI	AGGCCT	1 cut(s)	666
PciSI	GCTCTTC	1 cut(s)	1967
PctI	GAATGC	1 cut(s)	1814
PdmI	GAANNNNTTC	1 cut(s)	2286
PfeI	GAWTC	4 cut(s)	191, 1109, 1778, 2110
PflFI	GACNNNGTC	1 cut(s)	1532
PinAI	ACCGGT	1 cut(s)	56
PkrI	GCNGC	7 cut(s)	162, 712, 964, 1234, 1814, 2215, 2274
PleI	GAGTC	6 cut(s)	239, 852, 887, 1328, 1355, 2335
PpsI	GAGTC	6 cut(s)	239, 852, 887, 1328, 1355, 2335
Ppu21I	YACGTR	1 cut(s)	520
PshBI	ATTAAT	1 cut(s)	837
PsiI	TTATAA	1 cut(s)	1590
Psp1406I	AACGTT	1 cut(s)	628
Psp6I	CCWGG	4 cut(s)	83, 194, 985, 1346
PspGI	CCWGG	4 cut(s)	83, 194, 985, 1346
PspN4I	GGNNCC	5 cut(s)	1123, 1611, 1937, 2098, 2295
PspOMI	GGGCCC	2 cut(s)	1609, 1935
PspPI	GGNCC	6 cut(s)	1385, 1609, 1610, 1826, 1935, 1936
PstI	CTGCAG	2 cut(s)	744, 892
PsuI	RGATCY	2 cut(s)	409, 508
PsyI	GACNNNGTC	1 cut(s)	1532
PvuII	CAGCTG	3 cut(s)	553, 899, 1235
RsaI	GTAC	9 cut(s)	392, 522, 578, 752, 1187, 1211, 1421, 2087, 2295
RsaNI	GTAC	9 cut(s)	391, 521, 577, 751, 1186, 1210, 1420, 2086, 2294
RseI	CAYNNNNRTG	1 cut(s)	792
SapI	GCTCTTC	1 cut(s)	1967
SaqAI	TTAA	7 cut(s)	462, 833, 837, 1095, 1686, 2076, 2258
SatI	GCNGC	7 cut(s)	161, 711, 963, 1233, 1813, 2214, 2273
Sau3AI	GATC	5 cut(s)	409, 508, 1156, 1660, 1950
Sau96I	GGNCC	6 cut(s)	1385, 1609, 1610, 1826, 1935, 1936
SbfI	CCTGCAGG	1 cut(s)	744
SchI	GAGTC	6 cut(s)	239, 853, 887, 1328, 1355, 2335
ScrFI	CCNGG	5 cut(s)	85, 196, 265, 987, 1348
SdaI	CCTGCAGG	1 cut(s)	744
SduI	GDGCHC	4 cut(s)	152, 789, 1613, 1939
SfaNI	GCATC	8 cut(s)	4, 106, 298, 664, 1060, 1297, 1396, 2003
SfcI	CTRYAG	4 cut(s)	740, 888, 1728, 1863
SinI	GGWCC	2 cut(s)	1385, 1826
SmiMI	CAYNNNNRTG	1 cut(s)	792
SmlI	CTYRAG	2 cut(s)	422, 1685
SmoI	CTYRAG	2 cut(s)	422, 1685
SnaBI	TACGTA	1 cut(s)	520
Sse8387I	CCTGCAGG	1 cut(s)	744
SseBI	AGGCCT	1 cut(s)	666
SsiI	CCGC	4 cut(s)	5, 1253, 2020, 2156
SspI	AATATT	2 cut(s)	732, 2335
SspMI	CTAG	6 cut(s)	287, 407, 497, 1113, 1118, 1526
StuI	AGGCCT	1 cut(s)	666
StyD4I	CCNGG	5 cut(s)	83, 194, 263, 985, 1346
StyI	CCWWGG	3 cut(s)	848, 1545, 1816
TaaI	ACNGT	8 cut(s)	755, 1054, 1106, 1129, 1192, 1413, 1621, 1867
TaiI	ACGT	4 cut(s)	45, 178, 522, 631
TaqI	TCGA	5 cut(s)	100, 598, 1371, 1578, 1663
TaqII	GACCGA	1 cut(s)	2024
TatI	WGTACW	3 cut(s)	390, 1185, 1209
TfiI	GAWTC	4 cut(s)	191, 1109, 1778, 2110
Tru1I	TTAA	7 cut(s)	462, 833, 837, 1095, 1686, 2076, 2258
Tru9I	TTAA	7 cut(s)	462, 833, 837, 1095, 1686, 2076, 2258
TscAI	CASTG	7 cut(s)	226, 615, 1111, 1132, 1195, 1416, 1872
TseFI	GTSAC	5 cut(s)	242, 606, 1256, 1375, 2201
TseI	GCWGC	7 cut(s)	160, 710, 962, 1232, 1812, 2213, 2272
Tsp45I	GTSAC	5 cut(s)	242, 606, 1256, 1375, 2201
TspDTI	ATGAA	7 cut(s)	116, 355, 390, 879, 1407, 1416, 1821
TspGWI	ACGGA	1 cut(s)	1037
TspRI	CASTG	7 cut(s)	226, 615, 1111, 1132, 1195, 1416, 1872
Tth111I	GACNNNGTC	1 cut(s)	1532
Vha464I	CTTAAG	1 cut(s)	1685
VpaK11BI	GGWCC	2 cut(s)	1385, 1826
VspI	ATTAAT	1 cut(s)	837
XapI	RAATTY	5 cut(s)	362, 377, 1025, 1943, 2218
XbaI	TCTAGA	1 cut(s)	406
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2320
XmiI	GTMKAC	2 cut(s)	1056, 1862
XmnI	GAANNNNTTC	1 cut(s)	2286
XspI	CTAG	6 cut(s)	287, 407, 497, 1113, 1118, 1526
Zsp2I	ATGCAT	1 cut(s)	313

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.