Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004380

Physical Location & Seq

Genomic Coordinates Forward (+)

30175642 .. 30180745

Gene Structure 5104 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G80260.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2988 bp

ATGGAGTCGTTGCTTCGAGCTGATCAAACCCTAATTCCGGGAGCGATGTGTAGCCGCAGAGTTTGGACACACTCAGAACTGGCTCTTCCCTCAGTGAGCGTAACTGAATTGGATCTGGTGAGAGGTCTATTACAAGCTTTGCAAGGTCTGTCTAGTCCCTTCCTTTTCTGGGACCAAACTGGACAAACTTTCCGCGCCAAAAGTCATATACGCGTCTCTCATTTGTCTCACTCAAGCCTTCATGTTCTTCTCGCTGGGTTCCTGTATCCCGCTACATGTTTGAAACTCGTTGAGTCTATCGTTGCTGCCATTAATACCTCTCTTAGGTCTCCTCCTACCTTAATGGCATTCTCTGACTCTGTCTCCGCATGGCTTGAGAGACTCAGAGATATTGCTTTGAAAGAGGAAGTGATGATCGACAATTCTGATATTACTGTTACTCCAACCCTCTTGGGATTAACCAGTTCTTTATCTAGTCTTTGTTCAGGTGCTGAATATCTCTTACAAGTTGTACATGGTGCCATCCCTCATACGTTTTTTGATTCAAACTCTACGATTTCCGCTGCTGAGATTGCTGTCCATGTTCTTGATTATCTTTACAAGAAGCTTGATGAAGTATGCCTTGTACAAGGTGGTGAGGTGGAAGGATTTCACATGCTGTTGCAAATGTTTGCTGGAAGTTTATTGCCATATATAGAGGGTTTGGATTCATGGTTGTTTGAGGGAACTCTTGATGATCCTTGTGAAGAGTTGTTTTTTACAGCCAACCAATCGGTCTCCGTTGACGATGCAGAGTTTTGGGAGAAAAGCTATCAGTTGATGAAGGTGCCCAACTCAAAATCAAATGTAACTTCACTAAACGAAAAGAAAGTAATGAGTGGACATGACGCCAACTCATCTTTAGCTTCTGACAAAGACAAAGAGCAAAATACTCGGGTGTTATGTCCCTTATTCATTAAAGACATCTGTAAGTCTATTGTTTCTGCTGGAAAGTCACTGCAGCTAATGCAGCATATTCCTTCCACGTCTTCAGAAAATTCTGGAAAGACTCAGTTCCATGGGCGAAATGGTTATGGGAAATCTAGCGTTGGTAGTCTCCTGACTAAAATGAGCAGCTGTAGTAGCACTGCGGACTTATCCTTGTCTGAAGTCTTTTGTTTGACACTCGCCGGCCTTATAGGCCATGGTGATCATGTCTCTAGATATCTGTGGAAAGATGAGGCGGATGAGTGGGAGATTTCTCCAACTTTAGCATCATATATAAGTGGAGAGCTTGTGAATGACATGGATAATAAAGATCTTCCAGTTCTCACATGCTCAGAGCGAATGTGGTATAAGTTGTTGGTCGGTGCTGTGCAAGAGAAAAGAGCTATGGAGGCCAAATCAGAACTCCAGAGTGCATGCTATGCTACAGGTGTTAAGGATGGAAATAGTGGTCTCACTGCCCAAAAGGCGTTGCAGGGGTTATTCTGTAATGAAAACCTTGTTGTTTCAGTATCTAAAATGGATCTTGAGAGGAATAGAAATGCTTGGAATGTCTTGAACTTGTCGCAAAACTATTGTCTACCCTCTCTTAATGATGAGAGTCTGTTGAGTGCTGTTTTTGAAGAATCTGGCATGGCAGATGCTGGACTGAGTGGAACAAACTACAAATTTGGATTCCAATTTGGTAGATCTGAATATATTTCTTCTCAGGATGACACAAACCTTCTAGAAACATTATTTCCCTTTCCCACTTTGCTTCCGTCATTCCAGCCGAAGCTCCATCTGTCAGAATTCTTACCTTTCCAAAAGAATAGTACACTTCCTTCAAGAGTTCTCAGCTGGTTGCTAAAGGCAGAGCCAATGGATACTCGACTTCCCGTTGTAATTATGCAGGAATGCTTCACAATTTACATAAGGAGGCAGGTGGACTACATTGGCAAAGTGATTTTGTCAAAACTAATGAATGACTGGAAATTGATGCACGAACTTGCTGTATTGCGCGCCATTTACTTGCTAGGTTCAGGGGACCTGCTGCAGCATTTTCTGACTGTCATTTTCGATAGGCTGGGCAAGGGAGAGTCATCAAATGATGATTTTGAGTTGAACATAATACTTCAGGAATCAATTAGAAATTCAGCTGATGCCATGCTGTTAAGCAGTCCTGATTCATTGGTGGTATCTATTTCCAGAGAAGACAGAGACAAAGATGATAAGGGTGACATAATACCCCTTTCTTCAACTCGTAAAAGCCGCGTTAACAGCTTTGGAATAGATTGTCTCGAGTCTCTCAAATTCACATACAAGGTGCCATGGCCACTTGAGCTTATTGCCAATAGTGAGGCCATTAAGAAGTATAACCAGGTGATGGGATTTTTGTTGAAGGTCAAGCGAGCAAAATATGTGCTTGATAAAGCACGAAGGTGGATGTGGAAGGGTAAAGGCTCTGCAACAAAAATCCGCAAGCACCACTGGTTACTAGAACAAAAGCTCCTCAACTTTGTGGATGCTTTTCATCAATACGTAATGGACAGGGTATATCACACTGCGTGGCGTGAACTGTGTGAAGCGATGGTAAAAGCAGGGTCTCTGGATGAGGTCATATATGTACATGAAACCTACTTGTTATCGATTCAGCGGCAATGCTTTGTGGTTCAAGAAAAGCTGTGGGCAATCATCGCAAGTCGGATCAACATGATTCTCGGTTTAGCTCTAGAATTCTACTCAATACAACAGACACTGAGCAGCGGTGGAGCAGTTTCAGCCATCAAGGCTAGATGCGAAATGGAAATAGACCGTATAGAGAAACAATTTGAGGACTGTATTGCTTTCCTTCTCAGAGTATTATCTTCGAAGCTGAATGTGGGACACTTCCCTCATTTGGCTGATTTGGTGACCAGAATCAATTACAATTATCACTACATGTCAGATACTGGAAGCTTGATGACTACTTCTGGAGCAGAGACCAACTCATCCAGACCTTGGACTGCCAAATCTGATGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005938 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009653 GO:0009893 GO:0009987 GO:0010562 GO:0010604 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0030587 GO:0031098 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0032502 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0048518 GO:0048522 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051703 GO:0051704 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071944 GO:0080090 GO:0090702 GO:0099120 GO:0099568 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Spc97_Spc98

Protein Analysis

995

Amino Acids

111.44

Weight (kDa)

5.78

Isoelectric Point (pI)

39.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GCP_N_terminal	PF17681	40 - 380	5.7e-17	Gamma tubulin complex component N-terminal
GCP_C_terminal	PF04130	654 - 842	5.9e-37	Gamma tubulin complex component C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0004380)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20570 AT1G20570 AT1G20570 AT1G20570 AT1G80260 AT1G80260 AT1G80260
fragaria_vesca	FvH4_2g40750 FvH4_2g40750 FvH4_2g40750
malus_domestica	MD15G1036000.v1.1
prunus_persica	Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1
pyrus_communis	pycom15g03350
rosa_chinensis	RchiOBHm_Chr6g0299841
rosa_laevigata	RLG00000011384
rosa_multiflora	Rmu_ssc0000048.1_g000001
rosa_roxburghii	Rroxscaffold_7G00168330
rosa_rugosa	Rorug06G0292600
rosa_samantha	Rh6AG403800 Rh6BG412100 Rh6CG418200 Rh6DG405000
rosa_wichuraiana	Rw6G035330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1897
Acc36I	ACCTGC	2 cut(s)	1897, 2022
AccB1I	GGYRCC	3 cut(s)	518, 826, 2290
AccB7I	CCANNNNNTGG	2 cut(s)	2350, 2964
AccI	GTMKAC	1 cut(s)	1564
AccII	CGCG	4 cut(s)	195, 213, 1986, 2238
AclWI	GGATC	4 cut(s)	120, 731, 1515, 2678
AcoI	YGGCCR	1 cut(s)	2297
AcsI	RAATTY	6 cut(s)	1036, 1652, 1775, 2116, 2276, 2699
AcuI	CTGAAG	3 cut(s)	1014, 1167, 2084
AcyI	GRCGYC	1 cut(s)	888
AdeI	CACNNNGTG	1 cut(s)	2532
AfaI	GTAC	4 cut(s)	513, 627, 1801, 2592
AfiI	CCNNNNNNNGG	6 cut(s)	37, 169, 324, 2350, 2863, 2964
AflIII	ACRYGT	3 cut(s)	211, 275, 2904
AjiI	CACGTC	1 cut(s)	1026
AjnI	CCWGG	1 cut(s)	2343
AleI	CACNNNNGTG	1 cut(s)	2404
AloI	GAACNNNNNNTCC	2 cut(s)	2457, 2489
AlwI	GGATC	4 cut(s)	120, 731, 1515, 2678
AlwNI	CAGNNNCTG	4 cut(s)	491, 1628, 2722, 2915
Ama87I	CYCGRG	2 cut(s)	933, 2264
AoxI	GGCC	5 cut(s)	1171, 1180, 1377, 2297, 2325
ApeKI	GCWGC	8 cut(s)	305, 563, 1000, 1009, 1113, 2017, 2020, 2727
ApoI	RAATTY	6 cut(s)	1036, 1652, 1775, 2116, 2276, 2699
ArsI	GACNNNNNNTTYG	2 cut(s)	1546, 1578
AseI	ATTAAT	1 cut(s)	312
Asp700I	GAANNNNTTC	1 cut(s)	648
AspLEI	GCGC	3 cut(s)	197, 1986, 1988
AspS9I	GGNCC	2 cut(s)	172, 2011
AsuC2I	CCSGG	1 cut(s)	39
AsuHPI	GGTGA	6 cut(s)	130, 647, 1199, 2213, 2359, 2887
AsuII	TTCGAA	1 cut(s)	2834
AvaI	CYCGRG	2 cut(s)	933, 2264
AvaII	GGWCC	2 cut(s)	172, 2011
BaeGI	GKGCMC	1 cut(s)	831
BalI	TGGCCA	1 cut(s)	2299
BanI	GGYRCC	3 cut(s)	518, 826, 2290
BarI	GAAGNNNNNNTAC	2 cut(s)	1792, 1824
BbsI	GAAGAC	2 cut(s)	1020, 2184
BbvI	GCAGC	8 cut(s)	292, 550, 1012, 1021, 1125, 2004, 2032, 2739
BccI	CCATC	6 cut(s)	530, 1418, 1773, 2344, 2548, 2756
BcgI	CGANNNNNNTGC	2 cut(s)	914, 948
BciT130I	CCWGG	1 cut(s)	2345
BciVI	GTATCC	2 cut(s)	276, 1843
BclI	TGATCA	2 cut(s)	22, 1189
BcnI	CCSGG	1 cut(s)	39
BfaI	CTAG	9 cut(s)	153, 474, 1083, 1200, 1712, 2000, 2462, 2696, 2757
BfmI	CTRYAG	4 cut(s)	998, 1117, 1410, 2018
BfuAI	ACCTGC	2 cut(s)	1897, 2022
BfuI	GTATCC	2 cut(s)	276, 1843
BglI	GCCNNNNNGGC	3 cut(s)	1179, 1451, 2753
BglII	AGATCT	2 cut(s)	1297, 1673
Bme1390I	CCNGG	2 cut(s)	39, 2345
Bme18I	GGWCC	2 cut(s)	172, 2011
BmeT110I	CYCGRG	2 cut(s)	933, 2264
BmgBI	CACGTC	1 cut(s)	1026
BmgT120I	GGNCC	2 cut(s)	172, 2011
BmiI	GGNNCC	6 cut(s)	173, 260, 520, 828, 2012, 2292
BmrFI	CCNGG	2 cut(s)	39, 2345
BmsI	GCATC	7 cut(s)	778, 1262, 1615, 1953, 2116, 2479, 2750
BpiI	GAAGAC	2 cut(s)	1020, 2184
BplI	GAGNNNNNCTC	2 cut(s)	2936, 2968
BpmI	CTGGAG	2 cut(s)	1376, 2958
Bpu14I	TTCGAA	1 cut(s)	2834
BpuEI	CTTGAG	4 cut(s)	217, 395, 1532, 2324
BpuMI	CCSGG	1 cut(s)	39
Bsa29I	ATCGAT	1 cut(s)	2612
BsaAI	YACGTR	1 cut(s)	2506
BsaHI	GRCGYC	1 cut(s)	888
BsaI	GGTCTC	5 cut(s)	333, 781, 1442, 2574, 2939
BsaJI	CCNNGG	4 cut(s)	1057, 1183, 2294, 2963
BsaXI	ACNNNNNCTCC	8 cut(s)	347, 377, 424, 454, 1260, 1290, 2457, 2487
Bsc4I	CCNNNNNNNGG	6 cut(s)	37, 169, 324, 2350, 2863, 2964
Bse118I	RCCGGY	1 cut(s)	1169
Bse1I	ACTGG	7 cut(s)	84, 184, 462, 1304, 1958, 2459, 2920
Bse3DI	GCAATG	1 cut(s)	2630
BseBI	CCWGG	1 cut(s)	2345
BseCI	ATCGAT	1 cut(s)	2612
BseDI	CCNNGG	4 cut(s)	1057, 1183, 2294, 2963
BseGI	GGATG	8 cut(s)	522, 1231, 1429, 1702, 2415, 2494, 2581, 2954
BseLI	CCNNNNNNNGG	6 cut(s)	37, 169, 324, 2350, 2863, 2964
BseMI	GCAATG	1 cut(s)	2630
BseNI	ACTGG	7 cut(s)	84, 184, 462, 1304, 1958, 2459, 2920
BsePI	GCGCGC	1 cut(s)	1984
BseRI	GAGGAG	2 cut(s)	321, 2465
BseSI	GKGCMC	1 cut(s)	831
BseXI	GCAGC	8 cut(s)	292, 550, 1012, 1021, 1125, 2004, 2032, 2739
BseYI	CCCAGC	2 cut(s)	254, 2050
Bsh1236I	CGCG	4 cut(s)	195, 213, 1986, 2238
BshFI	GGCC	5 cut(s)	1173, 1182, 1379, 2299, 2327
BshNI	GGYRCC	3 cut(s)	518, 826, 2290
BshVI	ATCGAT	1 cut(s)	2612
BsiHKCI	CYCGRG	2 cut(s)	933, 2264
BsiSI	CCGG	2 cut(s)	38, 1170
BslFI	GGGAC	5 cut(s)	141, 185, 930, 2024, 2862
BslI	CCNNNNNNNGG	6 cut(s)	37, 169, 324, 2350, 2863, 2964
BsmBI	CGTCTC	1 cut(s)	220
BsmFI	GGGAC	5 cut(s)	141, 185, 930, 2024, 2862
BsmI	GAATGC	2 cut(s)	347, 1886
BsnI	GGCC	5 cut(s)	1173, 1182, 1379, 2299, 2327
Bso31I	GGTCTC	5 cut(s)	333, 781, 1442, 2574, 2939
BsoBI	CYCGRG	2 cut(s)	933, 2264
Bsp119I	TTCGAA	1 cut(s)	2834
Bsp1286I	GDGCHC	1 cut(s)	831
Bsp1407I	TGTACA	3 cut(s)	511, 625, 2590
Bsp143I	GATC	9 cut(s)	22, 112, 414, 736, 1189, 1297, 1507, 1673, 2670
Bsp19I	CCATGG	3 cut(s)	1057, 1183, 2294
BspANI	GGCC	5 cut(s)	1173, 1182, 1379, 2299, 2327
BspDI	ATCGAT	1 cut(s)	2612
BspFNI	CGCG	4 cut(s)	195, 213, 1986, 2238
BspLI	GGNNCC	6 cut(s)	173, 260, 520, 828, 2012, 2292
BspMAI	CTGCAG	2 cut(s)	1002, 2022
BspMI	ACCTGC	2 cut(s)	1897, 2022
BspPI	GGATC	4 cut(s)	120, 731, 1515, 2678
BspQI	GCTCTTC	1 cut(s)	90
BspT104I	TTCGAA	1 cut(s)	2834
BspT107I	GGYRCC	3 cut(s)	518, 826, 2290
BspTNI	GGTCTC	5 cut(s)	333, 781, 1442, 2574, 2939
BsrDI	GCAATG	1 cut(s)	2630
BsrFI	RCCGGY	1 cut(s)	1169
BsrGI	TGTACA	3 cut(s)	511, 625, 2590
BsrI	ACTGG	7 cut(s)	84, 184, 462, 1304, 1958, 2459, 2920
BssAI	RCCGGY	1 cut(s)	1169
BssECI	CCNNGG	4 cut(s)	1057, 1183, 2294, 2963
BssHII	GCGCGC	1 cut(s)	1984
BssMI	GATC	9 cut(s)	22, 112, 414, 736, 1189, 1297, 1507, 1673, 2670
BssNI	GRCGYC	1 cut(s)	888
BssT1I	CCWWGG	4 cut(s)	1057, 1183, 2294, 2963
Bst2UI	CCWGG	1 cut(s)	2345
Bst4CI	ACNGT	5 cut(s)	436, 2035, 2544, 2780, 2804
Bst6I	CTCTTC	2 cut(s)	90, 741
BstACI	GRCGYC	1 cut(s)	888
BstAPI	GCANNNNNTGC	2 cut(s)	1006, 1406
BstAUI	TGTACA	3 cut(s)	511, 625, 2590
BstBAI	YACGTR	1 cut(s)	2506
BstBI	TTCGAA	1 cut(s)	2834
BstC8I	GCNNGC	5 cut(s)	1171, 1402, 1986, 2376, 2447
BstDSI	CCRYGG	3 cut(s)	1057, 1183, 2294
BstEII	GGTNACC	1 cut(s)	2875
BstENI	CCTNNNNNAGG	1 cut(s)	322
BstF5I	GGATG	8 cut(s)	522, 1231, 1429, 1702, 2415, 2494, 2581, 2954
BstFNI	CGCG	4 cut(s)	195, 213, 1986, 2238
BstHHI	GCGC	3 cut(s)	197, 1986, 1988
BstKTI	GATC	9 cut(s)	25, 115, 417, 739, 1192, 1300, 1510, 1676, 2673
BstMBI	GATC	9 cut(s)	22, 112, 414, 736, 1189, 1297, 1507, 1673, 2670
BstNI	CCWGG	1 cut(s)	2345
BstNSI	RCATGY	5 cut(s)	279, 658, 1317, 1404, 2908
BstPI	GGTNACC	1 cut(s)	2875
BstSCI	CCNGG	2 cut(s)	37, 2343
BstSFI	CTRYAG	4 cut(s)	998, 1117, 1410, 2018
BstSLI	GKGCMC	1 cut(s)	831
BstSNI	TACGTA	1 cut(s)	2506
BstUI	CGCG	4 cut(s)	195, 213, 1986, 2238
BstV1I	GCAGC	8 cut(s)	292, 550, 1012, 1021, 1125, 2004, 2032, 2739
BstV2I	GAAGAC	2 cut(s)	1020, 2184
BstX2I	RGATCY	4 cut(s)	112, 1297, 1507, 1673
BstYI	RGATCY	4 cut(s)	112, 1297, 1507, 1673
Bsu15I	ATCGAT	1 cut(s)	2612
BsuI	GTATCC	2 cut(s)	276, 1843
BsuRI	GGCC	5 cut(s)	1173, 1182, 1379, 2299, 2327
BsuTUI	ATCGAT	1 cut(s)	2612
BtgI	CCRYGG	3 cut(s)	1057, 1183, 2294
BtgZI	GCGATG	3 cut(s)	59, 2567, 2644
BtrI	CACGTC	1 cut(s)	1026
BtsCI	GGATG	8 cut(s)	522, 1231, 1429, 1702, 2415, 2494, 2581, 2954
BtsI	GCAGTG	4 cut(s)	995, 1125, 1440, 2526
BtsIMutI	CAGTG	7 cut(s)	99, 995, 1125, 1440, 2452, 2526, 2720
BveI	ACCTGC	2 cut(s)	1897, 2022
Cac8I	GCNNGC	5 cut(s)	1171, 1402, 1986, 2376, 2447
CaiI	CAGNNNCTG	4 cut(s)	491, 1628, 2722, 2915
CfoI	GCGC	3 cut(s)	197, 1986, 1988
Cfr10I	RCCGGY	1 cut(s)	1169
Cfr13I	GGNCC	2 cut(s)	172, 2011
ClaI	ATCGAT	1 cut(s)	2612
CseI	GACGC	2 cut(s)	202, 896
CsiI	ACCWGGT	1 cut(s)	2343
Csp6I	GTAC	4 cut(s)	512, 626, 1800, 2591
CviQI	GTAC	4 cut(s)	512, 626, 1800, 2591
DpnI	GATC	9 cut(s)	24, 114, 416, 738, 1191, 1299, 1509, 1675, 2672
DpnII	GATC	9 cut(s)	22, 112, 414, 736, 1189, 1297, 1507, 1673, 2670
DraIII	CACNNNGTG	1 cut(s)	2532
EaeI	YGGCCR	1 cut(s)	2297
Eam1104I	CTCTTC	2 cut(s)	90, 741
EarI	CTCTTC	2 cut(s)	90, 741
EciI	GGCGGA	1 cut(s)	1238
Eco105I	TACGTA	1 cut(s)	2506
Eco130I	CCWWGG	4 cut(s)	1057, 1183, 2294, 2963
Eco31I	GGTCTC	5 cut(s)	333, 781, 1442, 2574, 2939
Eco32I	GATATC	1 cut(s)	1205
Eco47I	GGWCC	2 cut(s)	172, 2011
Eco57I	CTGAAG	3 cut(s)	1014, 1167, 2084
Eco88I	CYCGRG	2 cut(s)	933, 2264
Eco91I	GGTNACC	1 cut(s)	2875
EcoNI	CCTNNNNNAGG	1 cut(s)	322
EcoO109I	RGGNCCY	1 cut(s)	2011
EcoO65I	GGTNACC	1 cut(s)	2875
EcoRI	GAATTC	2 cut(s)	1775, 2699
EcoRII	CCWGG	1 cut(s)	2343
EcoRV	GATATC	1 cut(s)	1205
EcoT14I	CCWWGG	4 cut(s)	1057, 1183, 2294, 2963
ErhI	CCWWGG	4 cut(s)	1057, 1183, 2294, 2963
Esp3I	CGTCTC	1 cut(s)	220
FalI	AAGNNNNNCTT	2 cut(s)	606, 638
FaqI	GGGAC	5 cut(s)	141, 185, 930, 2024, 2862
FauI	CCCGC	1 cut(s)	277
FbaI	TGATCA	2 cut(s)	22, 1189
FblI	GTMKAC	1 cut(s)	1564
FokI	GGATG	8 cut(s)	509, 1238, 1436, 1709, 2422, 2501, 2588, 2941
FspBI	CTAG	9 cut(s)	153, 474, 1083, 1200, 1712, 2000, 2462, 2696, 2757
GlaI	GCGC	3 cut(s)	196, 1985, 1987
GsaI	CCCAGC	2 cut(s)	258, 2054
GsuI	CTGGAG	2 cut(s)	1376, 2958
HaeIII	GGCC	5 cut(s)	1173, 1182, 1379, 2299, 2327
HapII	CCGG	2 cut(s)	38, 1170
HgaI	GACGC	2 cut(s)	202, 896
HhaI	GCGC	3 cut(s)	197, 1986, 1988
Hin1I	GRCGYC	1 cut(s)	888
Hin6I	GCGC	3 cut(s)	195, 1984, 1986
HinP1I	GCGC	3 cut(s)	195, 1984, 1986
HincII	GTYRAC	2 cut(s)	784, 2242
HindII	GTYRAC	2 cut(s)	784, 2242
HindIII	AAGCTT	3 cut(s)	135, 605, 2920
HpaI	GTTAAC	1 cut(s)	2242
HpaII	CCGG	2 cut(s)	38, 1170
HphI	GGTGA	6 cut(s)	130, 647, 1199, 2213, 2359, 2887
Hpy166II	GTNNAC	7 cut(s)	784, 881, 1565, 1802, 1912, 2242, 2540
Hpy8I	GTNNAC	7 cut(s)	784, 881, 1565, 1802, 1912, 2242, 2540
HpyCH4III	ACNGT	5 cut(s)	436, 2035, 2544, 2780, 2804
HpyCH4IV	ACGT	3 cut(s)	533, 1025, 2505
HpySE526I	ACGT	3 cut(s)	533, 1025, 2505
Hsp92I	GRCGYC	1 cut(s)	888
HspAI	GCGC	3 cut(s)	195, 1984, 1986
KroI	GCCGGC	1 cut(s)	1169
KroNI	GCCGGC	1 cut(s)	1171
Ksp22I	TGATCA	2 cut(s)	22, 1189
KspAI	GTTAAC	1 cut(s)	2242
Kzo9I	GATC	9 cut(s)	22, 112, 414, 736, 1189, 1297, 1507, 1673, 2670
LguI	GCTCTTC	1 cut(s)	90
LmnI	GCTCC	5 cut(s)	41, 1767, 2478, 2735, 2939
Lsp1109I	GCAGC	8 cut(s)	292, 550, 1012, 1021, 1125, 2004, 2032, 2739
LweI	GCATC	7 cut(s)	778, 1262, 1615, 1953, 2116, 2479, 2750
MabI	ACCWGGT	1 cut(s)	2343
MaeI	CTAG	9 cut(s)	153, 474, 1083, 1200, 1712, 2000, 2462, 2696, 2757
MaeII	ACGT	3 cut(s)	533, 1025, 2505
MaeIII	GTNAC	7 cut(s)	100, 436, 847, 993, 2201, 2457, 2875
MalI	GATC	9 cut(s)	24, 114, 416, 738, 1191, 1299, 1509, 1675, 2672
MboI	GATC	9 cut(s)	22, 112, 414, 736, 1189, 1297, 1507, 1673, 2670
MflI	RGATCY	4 cut(s)	112, 1297, 1507, 1673
MhlI	GDGCHC	1 cut(s)	831
MlsI	TGGCCA	1 cut(s)	2299
MluI	ACGCGT	1 cut(s)	211
MluNI	TGGCCA	1 cut(s)	2299
MlyI	GAGTC	8 cut(s)	14, 302, 350, 375, 1042, 1594, 2072, 2276
MmeI	TCCRAC	3 cut(s)	467, 1268, 2648
Mox20I	TGGCCA	1 cut(s)	2299
MroNI	GCCGGC	1 cut(s)	1169
MroXI	GAANNNNTTC	1 cut(s)	648
MscI	TGGCCA	1 cut(s)	2299
MseI	TTAA	9 cut(s)	312, 341, 458, 957, 1419, 1575, 2138, 2241, 2331
MslI	CAYNNNNRTG	1 cut(s)	2404
Msp20I	TGGCCA	1 cut(s)	2299
MspA1I	CMGCKG	6 cut(s)	563, 1116, 1824, 2123, 2620, 2730
MspI	CCGG	2 cut(s)	38, 1170
MspR9I	CCNGG	2 cut(s)	39, 2345
Mva1269I	GAATGC	2 cut(s)	347, 1886
MvaI	CCWGG	1 cut(s)	2345
MvnI	CGCG	4 cut(s)	195, 213, 1986, 2238
NaeI	GCCGGC	1 cut(s)	1171
NciI	CCSGG	1 cut(s)	39
NcoI	CCATGG	3 cut(s)	1057, 1183, 2294
NdeII	GATC	9 cut(s)	22, 112, 414, 736, 1189, 1297, 1507, 1673, 2670
NgoMIV	GCCGGC	1 cut(s)	1169
NlaIV	GGNNCC	6 cut(s)	173, 260, 520, 828, 2012, 2292
NmuCI	GTSAC	3 cut(s)	993, 2201, 2875
NspI	RCATGY	5 cut(s)	279, 658, 1317, 1404, 2908
NspV	TTCGAA	1 cut(s)	2834
OliI	CACNNNNGTG	1 cut(s)	2404
PaeI	GCATGC	1 cut(s)	1404
PaeR7I	CTCGAG	1 cut(s)	2264
PaqCI	CACCTGC	1 cut(s)	1897
PauI	GCGCGC	1 cut(s)	1984
PciI	ACATGT	2 cut(s)	275, 2904
PciSI	GCTCTTC	1 cut(s)	90
PctI	GAATGC	2 cut(s)	347, 1886
PdiI	GCCGGC	1 cut(s)	1171
PdmI	GAANNNNTTC	1 cut(s)	648
PfeI	GAWTC	9 cut(s)	542, 707, 1610, 1659, 2105, 2150, 2614, 2680, 2883
PflFI	GACNNNGTC	1 cut(s)	359
PflMI	CCANNNNNTGG	2 cut(s)	2350, 2964
PfoI	TCCNGGA	1 cut(s)	37
PleI	GAGTC	8 cut(s)	13, 301, 350, 375, 1042, 1593, 2071, 2275
PpsI	GAGTC	8 cut(s)	13, 301, 350, 375, 1042, 1593, 2071, 2275
Ppu21I	YACGTR	1 cut(s)	2506
PpuMI	RGGWCCY	1 cut(s)	2011
PscI	ACATGT	2 cut(s)	275, 2904
PshBI	ATTAAT	1 cut(s)	312
Psp5II	RGGWCCY	1 cut(s)	2011
Psp6I	CCWGG	1 cut(s)	2343
PspEI	GGTNACC	1 cut(s)	2875
PspFI	CCCAGC	2 cut(s)	254, 2050
PspGI	CCWGG	1 cut(s)	2343
PspN4I	GGNNCC	6 cut(s)	173, 260, 520, 828, 2012, 2292
PspPI	GGNCC	2 cut(s)	172, 2011
PspPPI	RGGWCCY	1 cut(s)	2011
PstI	CTGCAG	2 cut(s)	1002, 2022
PstNI	CAGNNNCTG	4 cut(s)	491, 1628, 2722, 2915
PsuI	RGATCY	4 cut(s)	112, 1297, 1507, 1673
PsyI	GACNNNGTC	1 cut(s)	359
PteI	GCGCGC	1 cut(s)	1984
PvuII	CAGCTG	3 cut(s)	1116, 1824, 2123
RsaI	GTAC	4 cut(s)	513, 627, 1801, 2592
RsaNI	GTAC	4 cut(s)	512, 626, 1800, 2591
RseI	CAYNNNNRTG	1 cut(s)	2404
SapI	GCTCTTC	1 cut(s)	90
SaqAI	TTAA	9 cut(s)	312, 341, 458, 957, 1419, 1575, 2138, 2241, 2331
Sau3AI	GATC	9 cut(s)	22, 112, 414, 736, 1189, 1297, 1507, 1673, 2670
Sau96I	GGNCC	2 cut(s)	172, 2011
SchI	GAGTC	8 cut(s)	14, 302, 350, 375, 1042, 1594, 2072, 2276
ScrFI	CCNGG	2 cut(s)	39, 2345
SduI	GDGCHC	1 cut(s)	831
SexAI	ACCWGGT	1 cut(s)	2343
SfaNI	GCATC	7 cut(s)	778, 1262, 1615, 1953, 2116, 2479, 2750
SfcI	CTRYAG	4 cut(s)	998, 1117, 1410, 2018
SfiI	GGCCNNNNNGGCC	1 cut(s)	1179
Sfr274I	CTCGAG	1 cut(s)	2264
SfuI	TTCGAA	1 cut(s)	2834
SinI	GGWCC	2 cut(s)	172, 2011
SlaI	CTCGAG	1 cut(s)	2264
SmiMI	CAYNNNNRTG	1 cut(s)	2404
SmlI	CTYRAG	5 cut(s)	232, 374, 1511, 2264, 2303
SmoI	CTYRAG	5 cut(s)	232, 374, 1511, 2264, 2303
SnaBI	TACGTA	1 cut(s)	2506
SphI	GCATGC	1 cut(s)	1404
SspMI	CTAG	9 cut(s)	153, 474, 1083, 1200, 1712, 2000, 2462, 2696, 2757
StyD4I	CCNGG	2 cut(s)	37, 2343
StyI	CCWWGG	4 cut(s)	1057, 1183, 2294, 2963
TaaI	ACNGT	5 cut(s)	436, 2035, 2544, 2780, 2804
TaiI	ACGT	3 cut(s)	536, 1028, 2508
TaqI	TCGA	7 cut(s)	16, 417, 1855, 2043, 2265, 2612, 2834
TaqII	GACCGA	1 cut(s)	763
TatI	WGTACW	4 cut(s)	511, 625, 1799, 2590
TauI	GCSGC	3 cut(s)	57, 2238, 2623
TfiI	GAWTC	9 cut(s)	542, 707, 1610, 1659, 2105, 2150, 2614, 2680, 2883
Tru1I	TTAA	9 cut(s)	312, 341, 458, 957, 1419, 1575, 2138, 2241, 2331
Tru9I	TTAA	9 cut(s)	312, 341, 458, 957, 1419, 1575, 2138, 2241, 2331
TscAI	CASTG	7 cut(s)	99, 1002, 1132, 1447, 2459, 2533, 2727
TseFI	GTSAC	3 cut(s)	993, 2201, 2875
TseI	GCWGC	8 cut(s)	305, 563, 1000, 1009, 1113, 2017, 2020, 2727
Tsp45I	GTSAC	3 cut(s)	993, 2201, 2875
TspGWI	ACGGA	2 cut(s)	769, 1734
TspRI	CASTG	7 cut(s)	99, 1002, 1132, 1447, 2459, 2533, 2727
Tth111I	GACNNNGTC	1 cut(s)	359
Van91I	CCANNNNNTGG	2 cut(s)	2350, 2964
VpaK11BI	GGWCC	2 cut(s)	172, 2011
VspI	ATTAAT	1 cut(s)	312
XagI	CCTNNNNNAGG	1 cut(s)	322
XapI	RAATTY	6 cut(s)	1036, 1652, 1775, 2116, 2276, 2699
XbaI	TCTAGA	3 cut(s)	1199, 1711, 2695
XceI	RCATGY	5 cut(s)	279, 658, 1317, 1404, 2908
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1064
XhoI	CTCGAG	1 cut(s)	2264
XmiI	GTMKAC	1 cut(s)	1564
XmnI	GAANNNNTTC	1 cut(s)	648
XspI	CTAG	9 cut(s)	153, 474, 1083, 1200, 1712, 2000, 2462, 2696, 2757

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.