Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0004380

Physical Location & Seq

Genomic Coordinates Forward (+)

28979789 .. 28985012

Gene Structure 5224 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g40750.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2478 bp

ATGACAATGGGACTACGCCTACGTTATTGGGATTGGCCAGCTCCTTATCTAGGTGCGGAGTCTCTGTTGCAAATAGTGCATAGTGCCATTCCCCAAGTGTATTTTGAGTCCAATCCTTCTCTTTCTGCTGCTGAGTTGGCTGTTCATGTCCTTGACTACCTTTACAAGAAACTAGATGAAGTGTGCCTTGTCCAGGGTGGTGAGGAGGAAGATTACCAGATGTTACTTCATTTATTTATTGGAAGTATATTGCCATACATTGAGGGTCTTGATTCTTGGCTTTTTGAAGGAACACTTGATGATCCCTATGAGGAGATGTTCTTCTATGCTAATACAGCAGTTTCAGTTGATGAGGCGGACTTCTGGGAGAAGAGCTATCTATTGAGGCAAGTGCGGTGTCAAATCTTAGATGTTGGACGTGCTGCCCCATCTGGTGCCAGCGACCGTGCATCTGTAGTCAATGATAAAAAAGGAGTGGGTCAGAGGGAATCCATCTCATGTCCGTTGTTTATTAAGGACATAGCTAAGTCGATTGTTTCTGCTGGAAAATCATTACAGCTGATCCGGCATATTCCTATGACTTCTTCAGAAGGAAGTTGCTGTGGGATTGATGGTTTTGGCAATTTGAATAAAGGTGTGGACCGTGAGGAGAGCATTGCAGGTTTAACTTTGTCAGAAGTTTTTTGCGTGTCATTAGCAGGTCTTGTAGGACATGGTGATCATGTCTTTCAGTATATTGCAAGTAAACAAAAACTAGAATGTGATGATGGTGTGATTGAGTCAGTAAGAGGCTCAGAAAAAACATGGTGTAAATTCTTGGTTGATACGCTGTTGGAGAAAAGATTGATTGAAACCAAGTCTCCGCGAGCGTATGGAAAATCATTTCCTCATGTGGAAGTAGATAGTATGGTTGCAGATTTGGTAGAGAAATTTCCCCTTTCAAGATCCCTCTGTCAAGAAAATCCAGTTACAACAGTCTGCCAAAAGATTCTTTCTAAGAATGTGGATGCGTGGAAAACCTTGAACTTATCTAGAAATTTTAGCCTGCCCCCTTTAAATGATGAAGTTCTACGAGAGGCTATATTTGGTTGGGAGAGTGGATCAACTTCTTCGGCCAACGGAACCAACTATACATTTGGTTTTCGGTTTGGTGAATCTGAACATAATCGTTCACAAGACGACTCAAAAATGCTACAATTATTGTTTCCTTTTCCCACTCTTCTTCCTTCTTTTCAGGATGATCTTTGCATGTCAGAGCTCTTACCTTTCCAGAAAAATAGCACCCTTCCATCTAGAGTCCTTACTTGGATTCAATATTTTGAACCAAGAAGTACTCCACTTCCTGTGGTTATAGTGCAGGAATGTCTTACTGCCTACATTCAGAAGCAGGTGGATTGTATCGGCAGGCATGTATTGTCCAAATTGATGAATGATTGGAAGTTGATGGATGAATTGGCAGTGTTGCGTGCTATTTACTTGTTAGGGTCAGGTGATCTACTACAGCACTTCTTGACCGTCATTTTCAATAAGCTGGATAAAGGAGAAACATGGGACGATGATTTCGAATTAAACACTATATTGCAGGAATCTATTAGAAACTCTGCTGATGGTGTGCTCCTAAGTGTTCCTGATTCACTGGTTGTATCCCTCACCAAAATTCAAGATTTGAATGGCAATGAGCAGCCTAGTATGGCTTCCCTTCCCTCGACTCCTCGTAAAAGTTGTGCTAACAGCCTTGGAATGGATGGACTTGATTTACTACAGTTTACATACAAGGTCTCTTGGCCACTTGAACTTATTGCAAATGCAGAAGCGATCAAGAAATATAATCAAGTCATGGGATTCTTGCTGAAGGTCAAGCGAGCAAAGTTTGTACTGGATAAAGCTCGAAGGTGGATGTGGAAGGGTAGAGGCAGGGCTGCGAACAGCTATAAGCATCACTGGTTGGTGGAGCAGAAACTTCTCCATTTTGTTGATGCGTTTCACCAGTATGTGATGGACAGAGTGTATCACAATGCATGGCGTGAACTCTGTGAAGGTATGGCAGCCGCTCGTTCTCTGGATGAAGTCATAGAAGTACATGACTTGTACTTGTTGACAATTCAGCGACAGTGTTTTGTAGTTCCAGATAAGCTGTGGGCTCTCATTGCAACCAGGATAAACAACATTTTGGGATTAGCATTGGACTTCTACTCTATACAGCTGACACTTAGCGGTGGAGCAGTTTCTGCAATCAAGGCCAAATGTGAAATGGAAGTTGACCGTATTGAAAAACAGTTTGATGATTGCATCGCTTTCTTGCTCAGAGTACTCTCCTTCAAACTCAATGTAGGACACTTCCCGCATTTAGCAGATTTGGTTACTAGGATCAATTACAACCACTTTTACATGTCAGATACTGGAAATTTAAGGACTCTCCCAAGCTCTGAAAATATTACTTCTAGACTAGGAAAAGCCTTTTTAGGCAGAACAGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005938 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009653 GO:0009893 GO:0009987 GO:0010562 GO:0010604 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0030587 GO:0031098 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0032502 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0048518 GO:0048522 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051703 GO:0051704 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071944 GO:0080090 GO:0090702 GO:0099120 GO:0099568 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Spc97_Spc98

Protein Analysis

826

Amino Acids

93.16

Weight (kDa)

5.56

Isoelectric Point (pI)

40.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GCP_N_terminal	PF17681	48 - 201	1.4e-13	Gamma tubulin complex component N-terminal
GCP_C_terminal	PF04130	481 - 796	9.3e-66	Gamma tubulin complex component C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004380)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20570 AT1G20570 AT1G20570 AT1G20570 AT1G80260 AT1G80260 AT1G80260
fragaria_vesca	FvH4_2g40750 FvH4_2g40750 FvH4_2g40750
malus_domestica	MD15G1036000.v1.1
prunus_persica	Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1
pyrus_communis	pycom15g03350
rosa_chinensis	RchiOBHm_Chr6g0299841
rosa_laevigata	RLG00000011384
rosa_multiflora	Rmu_ssc0000048.1_g000001
rosa_roxburghii	Rroxscaffold_7G00168330
rosa_rugosa	Rorug06G0292600
rosa_samantha	Rh6AG403800 Rh6BG412100 Rh6CG418200 Rh6DG405000
rosa_wichuraiana	Rw6G035330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1378
Acc36I	ACCTGC	3 cut(s)	650, 689, 1378
AccB1I	GGYRCC	1 cut(s)	434
AccBSI	CCGCTC	1 cut(s)	2051
AccII	CGCG	1 cut(s)	865
AciI	CCGC	7 cut(s)	56, 356, 394, 863, 2049, 2214, 2342
AclWI	GGATC	5 cut(s)	296, 556, 939, 1108, 2375
AcoI	YGGCCR	3 cut(s)	35, 1113, 1784
AcsI	RAATTY	5 cut(s)	812, 929, 1036, 1656, 2404
AcuI	CTGAAG	2 cut(s)	570, 1871
AfaI	GTAC	5 cut(s)	1333, 1875, 2079, 2090, 2310
AfiI	CCNNNNNNNGG	3 cut(s)	50, 193, 1741
AflIII	ACRYGT	1 cut(s)	2388
AjiI	CACGTC	1 cut(s)	419
AjnI	CCWGG	2 cut(s)	192, 2153
Alw21I	GWGCWC	2 cut(s)	1260, 1617
Alw26I	GTCTC	3 cut(s)	66, 864, 1783
AlwI	GGATC	5 cut(s)	296, 556, 939, 1108, 2375
AlwNI	CAGNNNCTG	2 cut(s)	2228, 2399
AoxI	GGCC	4 cut(s)	35, 1113, 1784, 2238
ApeKI	GCWGC	5 cut(s)	128, 422, 1681, 1919, 2045
ApoI	RAATTY	5 cut(s)	812, 929, 1036, 1656, 2404
ArsI	GACNNNNNNTTYG	2 cut(s)	1544, 1576
AspS9I	GGNCC	1 cut(s)	640
AsuHPI	GGTGA	6 cut(s)	212, 728, 1163, 1502, 1642, 1976
AsuII	TTCGAA	1 cut(s)	1563
AvaII	GGWCC	1 cut(s)	640
BalI	TGGCCA	2 cut(s)	37, 1786
BanI	GGYRCC	1 cut(s)	434
BanII	GRGCYC	2 cut(s)	1260, 2143
Bbv12I	GWGCWC	2 cut(s)	1260, 1617
BbvI	GCAGC	5 cut(s)	115, 409, 1693, 1906, 2057
BccI	CCATC	9 cut(s)	436, 500, 605, 761, 1297, 1438, 1601, 1739, 1990
BciT130I	CCWGG	2 cut(s)	194, 2155
BciVI	GTATCC	1 cut(s)	1654
BclI	TGATCA	1 cut(s)	718
BcoDI	GTCTC	3 cut(s)	66, 864, 1783
BfaI	CTAG	9 cut(s)	50, 173, 755, 1032, 1293, 1686, 2364, 2442, 2447
BfmI	CTRYAG	3 cut(s)	453, 1499, 1760
BfuAI	ACCTGC	3 cut(s)	650, 689, 1378
BfuI	GTATCC	1 cut(s)	1654
BisI	GCNGC	6 cut(s)	129, 423, 1682, 1920, 2046, 2049
BlsI	GCNGC	6 cut(s)	130, 424, 1683, 1921, 2047, 2050
BmcAI	AGTACT	2 cut(s)	1333, 2310
Bme1390I	CCNGG	2 cut(s)	194, 2155
Bme18I	GGWCC	1 cut(s)	640
BmgBI	CACGTC	1 cut(s)	419
BmgT120I	GGNCC	1 cut(s)	640
BmiI	GGNNCC	2 cut(s)	436, 1123
BmrFI	CCNGG	2 cut(s)	194, 2155
BmsI	GCATC	5 cut(s)	458, 997, 1945, 1966, 2298
Bpu14I	TTCGAA	1 cut(s)	1563
BsaI	GGTCTC	1 cut(s)	1783
BsaJI	CCNNGG	2 cut(s)	193, 1735
BsaXI	ACNNNNNCTCC	4 cut(s)	50, 80, 844, 874
Bsc4I	CCNNNNNNNGG	3 cut(s)	50, 193, 1741
Bse1I	ACTGG	6 cut(s)	965, 1641, 1881, 1946, 1987, 2404
Bse3DI	GCAATG	3 cut(s)	654, 1681, 2145
BseBI	CCWGG	2 cut(s)	194, 2155
BseDI	CCNNGG	2 cut(s)	193, 1735
BseGI	GGATG	6 cut(s)	1012, 1243, 1453, 1750, 1902, 2068
BseLI	CCNNNNNNNGG	3 cut(s)	50, 193, 1741
BseMI	GCAATG	3 cut(s)	654, 1681, 2145
BseMII	CTCAG	3 cut(s)	123, 807, 2317
BseNI	ACTGG	6 cut(s)	965, 1641, 1881, 1946, 1987, 2404
BseRI	GAGGAG	4 cut(s)	218, 326, 662, 1701
BseXI	GCAGC	5 cut(s)	115, 409, 1693, 1906, 2057
BsgI	GTGCAG	1 cut(s)	1376
Bsh1236I	CGCG	1 cut(s)	865
Bsh1285I	CGRYCG	1 cut(s)	445
BshFI	GGCC	4 cut(s)	37, 1115, 1786, 2240
BshNI	GGYRCC	1 cut(s)	434
BsiEI	CGRYCG	1 cut(s)	445
BsiHKAI	GWGCWC	2 cut(s)	1260, 1617
BsiSI	CCGG	1 cut(s)	565
BslFI	GGGAC	2 cut(s)	24, 1565
BslI	CCNNNNNNNGG	3 cut(s)	50, 193, 1741
BsmAI	GTCTC	3 cut(s)	66, 864, 1783
BsmFI	GGGAC	2 cut(s)	24, 1565
BsnI	GGCC	4 cut(s)	37, 1115, 1786, 2240
Bso31I	GGTCTC	1 cut(s)	1783
Bsp119I	TTCGAA	1 cut(s)	1563
Bsp1286I	GDGCHC	3 cut(s)	1260, 1617, 2143
Bsp143I	GATC	9 cut(s)	301, 561, 718, 944, 1100, 1240, 1492, 1815, 2367
BspACI	CCGC	7 cut(s)	56, 356, 394, 863, 2049, 2214, 2342
BspANI	GGCC	4 cut(s)	37, 1115, 1786, 2240
BspCNI	CTCAG	3 cut(s)	124, 806, 2316
BspFNI	CGCG	1 cut(s)	865
BspLI	GGNNCC	2 cut(s)	436, 1123
BspMI	ACCTGC	3 cut(s)	650, 689, 1378
BspPI	GGATC	5 cut(s)	296, 556, 939, 1108, 2375
BspQI	GCTCTTC	1 cut(s)	365
BspT104I	TTCGAA	1 cut(s)	1563
BspT107I	GGYRCC	1 cut(s)	434
BspTNI	GGTCTC	1 cut(s)	1783
BsrBI	CCGCTC	1 cut(s)	2051
BsrDI	GCAATG	3 cut(s)	654, 1681, 2145
BsrI	ACTGG	6 cut(s)	965, 1641, 1881, 1946, 1987, 2404
BssECI	CCNNGG	2 cut(s)	193, 1735
BssMI	GATC	9 cut(s)	301, 561, 718, 944, 1100, 1240, 1492, 1815, 2367
BssT1I	CCWWGG	1 cut(s)	1735
Bst2UI	CCWGG	2 cut(s)	194, 2155
Bst4CI	ACNGT	8 cut(s)	446, 644, 976, 1516, 1764, 2112, 2264, 2277
Bst6I	CTCTTC	2 cut(s)	365, 1224
BstAPI	GCANNNNNTGC	2 cut(s)	76, 2228
BstBI	TTCGAA	1 cut(s)	1563
BstC8I	GCNNGC	7 cut(s)	39, 439, 867, 1046, 1406, 1467, 1863
BstDEI	CTNAG	8 cut(s)	132, 406, 525, 793, 996, 1619, 2210, 2303
BstENI	CCTNNNNNAGG	2 cut(s)	48, 191
BstF5I	GGATG	6 cut(s)	1012, 1243, 1453, 1750, 1902, 2068
BstFNI	CGCG	1 cut(s)	865
BstKTI	GATC	9 cut(s)	304, 564, 721, 947, 1103, 1243, 1495, 1818, 2370
BstMAI	GTCTC	3 cut(s)	66, 864, 1783
BstMBI	GATC	9 cut(s)	301, 561, 718, 944, 1100, 1240, 1492, 1815, 2367
BstMCI	CGRYCG	1 cut(s)	445
BstMWI	GCNNNNNNNGC	7 cut(s)	76, 137, 335, 565, 2147, 2228, 2237
BstNI	CCWGG	2 cut(s)	194, 2155
BstNSI	RCATGY	3 cut(s)	1252, 1412, 2392
BstSCI	CCNGG	2 cut(s)	192, 2153
BstSFI	CTRYAG	3 cut(s)	453, 1499, 1760
BstUI	CGCG	1 cut(s)	865
BstV1I	GCAGC	5 cut(s)	115, 409, 1693, 1906, 2057
BstX2I	RGATCY	1 cut(s)	944
BstYI	RGATCY	1 cut(s)	944
BsuI	GTATCC	1 cut(s)	1654
BsuRI	GGCC	4 cut(s)	37, 1115, 1786, 2240
BtgZI	GCGATG	1 cut(s)	2275
BtrI	CACGTC	1 cut(s)	419
BtsCI	GGATG	6 cut(s)	1012, 1243, 1453, 1750, 1902, 2068
BtsI	GCAGTG	1 cut(s)	1464
BtsIMutI	CAGTG	4 cut(s)	1464, 1634, 1939, 2117
BveI	ACCTGC	3 cut(s)	650, 689, 1378
Cac8I	GCNNGC	7 cut(s)	39, 439, 867, 1046, 1406, 1467, 1863
CaiI	CAGNNNCTG	2 cut(s)	2228, 2399
Cfr13I	GGNCC	1 cut(s)	640
Csp6I	GTAC	5 cut(s)	1332, 1874, 2078, 2089, 2309
CviQI	GTAC	5 cut(s)	1332, 1874, 2078, 2089, 2309
DdeI	CTNAG	8 cut(s)	132, 406, 525, 793, 996, 1619, 2210, 2303
DpnI	GATC	9 cut(s)	303, 563, 720, 946, 1102, 1242, 1494, 1817, 2369
DpnII	GATC	9 cut(s)	301, 561, 718, 944, 1100, 1240, 1492, 1815, 2367
DraI	TTTAAA	1 cut(s)	1056
EaeI	YGGCCR	3 cut(s)	35, 1113, 1784
Eam1104I	CTCTTC	2 cut(s)	365, 1224
EarI	CTCTTC	2 cut(s)	365, 1224
EciI	GGCGGA	1 cut(s)	371
Ecl136II	GAGCTC	1 cut(s)	1258
Eco130I	CCWWGG	1 cut(s)	1735
Eco24I	GRGCYC	2 cut(s)	1260, 2143
Eco31I	GGTCTC	1 cut(s)	1783
Eco47I	GGWCC	1 cut(s)	640
Eco53kI	GAGCTC	1 cut(s)	1258
Eco57I	CTGAAG	2 cut(s)	570, 1871
EcoICRI	GAGCTC	1 cut(s)	1258
EcoNI	CCTNNNNNAGG	2 cut(s)	48, 191
EcoRII	CCWGG	2 cut(s)	192, 2153
EcoT14I	CCWWGG	1 cut(s)	1735
EcoT22I	ATGCAT	1 cut(s)	2020
EcoT38I	GRGCYC	2 cut(s)	1260, 2143
ErhI	CCWWGG	1 cut(s)	1735
FalI	AAGNNNNNCTT	4 cut(s)	171, 203, 279, 311
FaqI	GGGAC	2 cut(s)	24, 1565
FauI	CCCGC	1 cut(s)	2349
FbaI	TGATCA	1 cut(s)	718
Fnu4HI	GCNGC	6 cut(s)	129, 423, 1682, 1920, 2046, 2049
FokI	GGATG	6 cut(s)	1019, 1250, 1460, 1757, 1909, 2075
FriOI	GRGCYC	2 cut(s)	1260, 2143
Fsp4HI	GCNGC	6 cut(s)	129, 423, 1682, 1920, 2046, 2049
FspBI	CTAG	9 cut(s)	50, 173, 755, 1032, 1293, 1686, 2364, 2442, 2447
GluI	GCNGC	6 cut(s)	129, 423, 1682, 1920, 2046, 2049
HaeIII	GGCC	4 cut(s)	37, 1115, 1786, 2240
HapII	CCGG	1 cut(s)	565
HincII	GTYRAC	2 cut(s)	2097, 2260
HindII	GTYRAC	2 cut(s)	2097, 2260
HpaII	CCGG	1 cut(s)	565
HphI	GGTGA	6 cut(s)	212, 728, 1163, 1502, 1642, 1976
Hpy166II	GTNNAC	7 cut(s)	640, 746, 1172, 1767, 2027, 2097, 2260
Hpy8I	GTNNAC	7 cut(s)	640, 746, 1172, 1767, 2027, 2097, 2260
HpyCH4III	ACNGT	8 cut(s)	446, 644, 976, 1516, 1764, 2112, 2264, 2277
HpyCH4IV	ACGT	2 cut(s)	22, 418
HpyF10VI	GCNNNNNNNGC	7 cut(s)	76, 137, 335, 565, 2147, 2228, 2237
HpyF3I	CTNAG	8 cut(s)	132, 406, 525, 793, 996, 1619, 2210, 2303
HpySE526I	ACGT	2 cut(s)	22, 418
Ksp22I	TGATCA	1 cut(s)	718
Kzo9I	GATC	9 cut(s)	301, 561, 718, 944, 1100, 1240, 1492, 1815, 2367
LguI	GCTCTTC	1 cut(s)	365
LmnI	GCTCC	4 cut(s)	46, 1620, 1951, 2219
Lsp1109I	GCAGC	5 cut(s)	115, 409, 1693, 1906, 2057
LweI	GCATC	5 cut(s)	458, 997, 1945, 1966, 2298
MaeI	CTAG	9 cut(s)	50, 173, 755, 1032, 1293, 1686, 2364, 2442, 2447
MaeII	ACGT	2 cut(s)	22, 418
MaeIII	GTNAC	3 cut(s)	222, 967, 2359
MalI	GATC	9 cut(s)	303, 563, 720, 946, 1102, 1242, 1494, 1817, 2369
MbiI	CCGCTC	1 cut(s)	2051
MboI	GATC	9 cut(s)	301, 561, 718, 944, 1100, 1240, 1492, 1815, 2367
MboII	GAAGA	7 cut(s)	221, 313, 382, 576, 1101, 1211, 1214
MflI	RGATCY	1 cut(s)	944
MhlI	GDGCHC	3 cut(s)	1260, 1617, 2143
MlsI	TGGCCA	2 cut(s)	37, 1786
MluNI	TGGCCA	2 cut(s)	37, 1786
MlyI	GAGTC	7 cut(s)	68, 116, 788, 1175, 1305, 1702, 2407
MmeI	TCCRAC	2 cut(s)	394, 813
Mox20I	TGGCCA	2 cut(s)	37, 1786
Mph1103I	ATGCAT	1 cut(s)	2020
MscI	TGGCCA	2 cut(s)	37, 1786
MseI	TTAA	5 cut(s)	513, 665, 1055, 1568, 2408
MslI	CAYNNNNRTG	1 cut(s)	1989
Msp20I	TGGCCA	2 cut(s)	37, 1786
MspA1I	CMGCKG	2 cut(s)	559, 2203
MspI	CCGG	1 cut(s)	565
MspR9I	CCNGG	2 cut(s)	194, 2155
MvaI	CCWGG	2 cut(s)	194, 2155
MvnI	CGCG	1 cut(s)	865
MwoI	GCNNNNNNNGC	7 cut(s)	76, 137, 335, 565, 2147, 2228, 2237
NdeII	GATC	9 cut(s)	301, 561, 718, 944, 1100, 1240, 1492, 1815, 2367
NlaIV	GGNNCC	2 cut(s)	436, 1123
NsiI	ATGCAT	1 cut(s)	2020
NspI	RCATGY	3 cut(s)	1252, 1412, 2392
NspV	TTCGAA	1 cut(s)	1563
PaqCI	CACCTGC	1 cut(s)	1378
PciI	ACATGT	1 cut(s)	2388
PciSI	GCTCTTC	1 cut(s)	365
PcsI	WCGNNNNNNNCGW	1 cut(s)	1560
PfeI	GAWTC	8 cut(s)	272, 488, 988, 1154, 1309, 1586, 1631, 1842
PkrI	GCNGC	6 cut(s)	130, 424, 1683, 1921, 2047, 2050
PleI	GAGTC	7 cut(s)	67, 115, 787, 1175, 1304, 1702, 2407
PpsI	GAGTC	7 cut(s)	67, 115, 787, 1175, 1304, 1702, 2407
PscI	ACATGT	1 cut(s)	2388
Psp124BI	GAGCTC	1 cut(s)	1260
Psp6I	CCWGG	2 cut(s)	192, 2153
PspGI	CCWGG	2 cut(s)	192, 2153
PspN4I	GGNNCC	2 cut(s)	436, 1123
PspPI	GGNCC	1 cut(s)	640
PsrI	GAACNNNNNNTAC	2 cut(s)	1114, 1146
PstNI	CAGNNNCTG	2 cut(s)	2228, 2399
PsuI	RGATCY	1 cut(s)	944
PvuII	CAGCTG	2 cut(s)	559, 2203
RsaI	GTAC	5 cut(s)	1333, 1875, 2079, 2090, 2310
RsaNI	GTAC	5 cut(s)	1332, 1874, 2078, 2089, 2309
RseI	CAYNNNNRTG	1 cut(s)	1989
SacI	GAGCTC	1 cut(s)	1260
SapI	GCTCTTC	1 cut(s)	365
SaqAI	TTAA	5 cut(s)	513, 665, 1055, 1568, 2408
SatI	GCNGC	6 cut(s)	129, 423, 1682, 1920, 2046, 2049
Sau3AI	GATC	9 cut(s)	301, 561, 718, 944, 1100, 1240, 1492, 1815, 2367
Sau96I	GGNCC	1 cut(s)	640
ScaI	AGTACT	2 cut(s)	1333, 2310
SchI	GAGTC	7 cut(s)	68, 116, 788, 1175, 1305, 1702, 2407
ScrFI	CCNGG	2 cut(s)	194, 2155
SduI	GDGCHC	3 cut(s)	1260, 1617, 2143
SfaNI	GCATC	5 cut(s)	458, 997, 1945, 1966, 2298
SfcI	CTRYAG	3 cut(s)	453, 1499, 1760
SfuI	TTCGAA	1 cut(s)	1563
SinI	GGWCC	1 cut(s)	640
SmiMI	CAYNNNNRTG	1 cut(s)	1989
SsiI	CCGC	7 cut(s)	56, 356, 394, 863, 2049, 2214, 2342
SspI	AATATT	2 cut(s)	1316, 2434
SspMI	CTAG	9 cut(s)	50, 173, 755, 1032, 1293, 1686, 2364, 2442, 2447
SstI	GAGCTC	1 cut(s)	1260
StyD4I	CCNGG	2 cut(s)	192, 2153
StyI	CCWWGG	1 cut(s)	1735
TaaI	ACNGT	8 cut(s)	446, 644, 976, 1516, 1764, 2112, 2264, 2277
TaiI	ACGT	2 cut(s)	25, 421
TaqI	TCGA	4 cut(s)	530, 1563, 1706, 1888
TatI	WGTACW	5 cut(s)	1331, 1873, 2077, 2088, 2308
TauI	GCSGC	1 cut(s)	2051
TfiI	GAWTC	8 cut(s)	272, 488, 988, 1154, 1309, 1586, 1631, 1842
Tru1I	TTAA	5 cut(s)	513, 665, 1055, 1568, 2408
Tru9I	TTAA	5 cut(s)	513, 665, 1055, 1568, 2408
TscAI	CASTG	4 cut(s)	1464, 1641, 1946, 2117
TseI	GCWGC	5 cut(s)	128, 422, 1681, 1919, 2045
TspDTI	ATGAA	7 cut(s)	134, 192, 218, 1077, 1442, 1464, 2079
TspGWI	ACGGA	2 cut(s)	492, 1134
TspRI	CASTG	4 cut(s)	1464, 1641, 1946, 2117
VpaK11BI	GGWCC	1 cut(s)	640
XagI	CCTNNNNNAGG	2 cut(s)	48, 191
XapI	RAATTY	5 cut(s)	812, 929, 1036, 1656, 2404
XbaI	TCTAGA	3 cut(s)	1031, 1292, 2441
XceI	RCATGY	3 cut(s)	1252, 1412, 2392
XcmI	CCANNNNNNNNNTGG	2 cut(s)	2133, 2248
XspI	CTAG	9 cut(s)	50, 173, 755, 1032, 1293, 1686, 2364, 2442, 2447
ZrmI	AGTACT	2 cut(s)	1333, 2310
Zsp2I	ATGCAT	1 cut(s)	2020

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.