Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0004380

Physical Location & Seq

Genomic Coordinates Forward (+)

9217816 .. 9229640

Gene Structure 11825 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00168330.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 5475 bp

ATGATGATAATGATGAGCATTGCGCTGAGGTTTCAATTCCCAGGGGGCATTCTGACATTTTCAACCGACGGCTTCAACAACACCCACAGCAGCACCACCGCCACCACCAGTTGCCACCGCCTACCACTTCCACAATTTTCTTCTTCAACCTTTCCCAATCACCTAATGCCTTCTTCTTCTTCTGCTCCATCTCAATCTCATCAAAAACGAACCTTTTTTACATCTTCATCTTCATCTTCTACTCCTGCTTCCTCCTCCTCCTCTGTCTCAGCTCTGAGACCGGGGATCAACAGAAGCGGCAGTGATGTTAACAGCCCACGGCGGCTCACGCGCCAGAGGAAGCTGCGGTACCTCGAGAGCCCCGAGGATCCCGACTCTTACGGGGTCCCGGAGAAGTCTCGCTCATCGCCCACCTCGCCTGAATGTTCGACCCGTAGATCACGCTTTCCGTCTGGCGAGTCAAACCCAAATTCACGCTCTCCCGGTGGCGAGTCGGCCCCATGGTCTCGGTCTTCGGTCGGTGACTCGGCCCGAAAGTCATGCTCCTCTTCTTTCGTTGCTGGGCCTCAACGCCCACAACCCTTGCCGCTTCCGGAGAACAACCGGAGACCCGACTGCGTCATAAACAACTTGTTCAGCCCTGTGGTCGGCAGGAAGAGCGTCGATCAAGCTGCCACAAGCTCGTCATCACCGGTGAAATCTTCCAAGAACCGAAGCCGAGATGTAAACAATTCCGGCGGGGGTGGGGGTTTTAATTTCCATTTGGGTTTGAATGTTCAATCTAGGGCTACTAGGAGTGCTCCACAGACTGTTTTTAGCTCAAGTCATCATCCTGTTAGCCCACAAAGATCAAACACAGTGGATTTTTTGCCTTCTCAGTCACATGTTGCACGCAACTATTATAACAGGGGAATGGGAATGGGAATGGCAGTGTCACCGGAGGCTAACTTTGAACGTGAAACTTACAACTTGAGCAGGAGTGCTCCAACCAGTGTTCTCTCAAGTCCCGCAGTTAGCCCGCGCCGATCAACCACTGGGGATCCTTTTCCTTTTTTCATGACTTACCAAGATCAATATCAGGATGGTGCTACCTTTCCCTCGTTTTTGTCACCAAAGAAGCTGACACTCAGTCCCACTCATTCTCCACTCCATAGCCCTACGCCTCGAAGTCCACGCTTCAGCTCCAATGGTTCAAACTATGAGAGTAGTCTTGCCACTGCTCACCCGTTGCCTCTGCCTCCTGGAGCCACAGTGCCAGCACAGCCGCCGTCTATCACTATGCATCAAAATAATGTAGCACCAAATGTAACCGTATCATCAATGAAAGGTCAATGGCAGAAGGGGAAACTTATCGGACGTGGTACCTTTGGTAGTGTTTATCTTGCAACCAACCGAGAAACTGGGGCCTTGTGTGCAATGAAGGAAGTTGATCTCATTCCTGATGATCCTAAATCTGCAGAAAGTATAAAGCAATTGGAGCAGGAAATTAAAGTCCTCCGTACACTAAAGCATCCAAATATTGTGCAGTACTATGGTAGTGAAGTGATTGATGATCATTTCTACATATATTTAGAATATGTTCACCCCGGATCAATAAATAAATATGTCCGAGACCATATTGGAGCTATGACTGAATCCGTAATCCGCAATTTTACCCGCCATATCCTCCGTGGGTTGGCTTTTTTGCATGACACGAAGACAATTCACAGTTCTGATGACTGTGCCAGGGATATTAAAGGTGCAAATTTGCTCGTTGATGCATCAGGTGTTGTCAAACTTGCCGATTTTGGGATGGCAAAACATGGCAGCCCATACTGGATGGCTCCTGAGGTCATAAAGGCTGTGATACAGAATGATGGTGATCCTAATCTTGCTTTGGCTGTTGATATATGGAGCTTGGGTTGTACCATCATCGAGATGTTCAATGGAAAACCGCCTTGGAGTGAATTTGAAGGGCCACAAGCTATGTTCAAGGTTCTGCACAGAACCCCGGATATACCAGAAAAATTATCTGCAGATGGAAAGGAATTCCTCAGTTTATGCTTCAAAAGGAACCCCGCAGAGAGGCCATCAGCTAAGAAGCTACTTGATCATCCTTTTGTACGAAATTCAAATGATCAAAATGTCTCATCTTATACTCGGGCTTTTTCTCTGAAAAGAAAAAAATGTTGTGGGGGTGCCAGGAGAGGCGAGGAAACCAGTAACCGCGTACCGCCTGAACCGGCGAGCAGCACCACCTGCAAACCTCTCGAGGGGTTTTCCACGTGGGAAATGACACGCGCGGCATCAACGTTTCTTTGTTTAACCACACGAGGGAAACATCGGGAAACGACCCCAAAGAGCTCTGCTTCAGCGTTAAATGGAGCTTCCAATGAAACCCCTCAACTCATTGATCTGGCTCTTCTCGGCCATCTAGTTATTTGCCAACTAGAATTGCTTCCCTCGTGTGAATGGATGAATGTGTCTATTCAAGGAGACCTTGCCATTTGCTATGTCAACAATCTCCTACTTGCTCACATCCTAGAATTGATGTCCTTCTGTGACTGGTTTGAGCATCAAGATGCAGGGAATGCAGAAGTTTCTCAAGCTCTAATCAACAAGATCTACGGCGTTTTCTCCCATGGCCTCCATTTCGCAACACCAGTCTCCTCCTTGAGAACCAATGAACTCGATTTGGTTCGGAGTGTGTTACAAATGTTACAAGGATATTCCAGTTCACTATTTTATTGGGATCATAATGGATACTCTTTTCAAGTCAAAACTGGGATATATGTTAATCACCTCTCTCATACAAGTCTTCACGCCATTGTGAGTCAGTTTATGTATGCTGCAACTTGCTTGCAACTCATAGAAATTGTGGTCAACAAAGTCGAGAAATCTGCGAGCTTACCTCCTCCTACTTTGAGGGCTTTTGTGTGTTCTGTTTCTGCATGGCTTAAGAGGTGGCGTGATATTGCTTTAAAGGAGGAAGTGAGGGTAAGCAAAGATGACAATGGAACGACTCCTACATTGTTGGGGTTGGCCAGCTCCTTATCCAGTCTATGCTCAGGTGCGGAGTCTCTGTTGCAAATAGTGCATTGTGCCATTCCCCAAGTGTATTTTGAGTCTGATCCTTCTCTTTCTGCTGCTGAGTTGACTCTTCATGTCCTTGACTCTCTTTACAAGAAACTAGATGAAGTATGCCTTGTCCGAGGTGGTGAGGACGAAGATTACCAGATGTTACTTCATTTATTTATTGGAAGTATATTGCCATACATTGAGGGTCTTGATTCTTGGCTTTTTGAAGGAACACTTGATGATCCCTATGAGGAGATGTTCTTCTATCCCAATAGAGCAGTTTCAGTTGATAAGGCTGACTTCTGGGAGAAGAGCTATCTATTGAAGCAAGTGCGGGGTCAAATCTTAGACGTTGGGCGTGCTGCTCCATCTCTTGCCACTGACCGTGCATCTGTAATAAATGACAAAAGGGGAGTGGGTCTGAGGGAATCCATCTCATGTCCGTTGTTTATTAAGGACATAGCTAAGTCGATCGTTTCCGCTGGAAAATCATTACAGCTGATCCGGCATATTCCTATGACTTCTTTAGGTGAAGGAAATTACTGTGCGATTGATGGTTTTGGCAGTTCGAATAAAGGTGTTCACCGTGGGGAGAGCATTGCAGGTTTAACTTTGTCAGAAGTTTTTTGCGTGTCATTAGCAGGTCTTGTAGGACATGGCGATCATATCTTTCAGTCTATTGCAAGTAAACAAAAACCGGAAAGTGATGATGGTGTGATTGAGTCAGTAAGAAGCTCAGAAAAACCTTGGTCATTCCCTGGTGCGAAAGAAGAGAGTATGTTTTCAGATTTGGTAGACAAATGTCCCCTTTCAAGATCCTTCTGTCAAGAAAATCCAGTTACAACAGTCTGCCAAAAAATCCTTTCTAAGAATGGAGATGCATGGAAAACCTTGAACTTATCTAGAAATTTTAGCCTGCCCCCTTTAAATGATGAAGTTCTACGAGCGGCTATATTTGGCAGGGATAGTGGATCAACTTCTTCGGCCAAAGGAACCAACTATACATTTGGTTTTCGGTTTGGTGAATCCGAACATATTCGTTCACAAGACGACTCAAAAATGTTACAAATGTTGTTTCCTTTTCCCACTCTTCTTCCTTCTTTTGAGGATGATCTCCGCATGTCAGAGCTCTTACCTTTTCAGAAAAATAGCACCCTTCCATCTAGAGTTCTTACTTGGATTCAGTATTTTGAACCGAGAAGTACTCCACTTCCCGTGGTTATAGTGCAGGAATGTCTTACTGCCTACATTCAGAAGCAGGTGGATTGTATTGGCAGGCATGTATTGTCGAAATTGATGAATGATTGGAAGTTGATGGATGAACTGGCAGTGTTGCGTGCTATTTACTTGTTAGGGTCAGGTGATCTACTACAGCACTTCTTGACCATAATTTTCAATAAGCTGGATAAAGGAGAAACATGGGATGATGATTTCGAGTTAAACACTATATTGCAGATTATGCTATGGGTGGCCTACTTCCCTTCTCTTCCTATTCATGACACAGTATCTCTGTTATTCACGCAGGAATCTATAAGAAACTCTGCTGATGGTGTGCTGCTAAGTGTTCCTGATTCATTGATTGTATCCCTCACCAAAAATCAAGATTTGAATGGCAATGAGCAGCCTAGTATGGCTTCCCTTCCCTCAACTCCTCGTAAAAGTCGTGCTAACAGCTTTGGAATGGATGGACTTGATCTACTACAGTTTACATACAAGGTCTCTTGGCCACTTGAACTTATTGCAAATGCAGAAGCAATCAAGAAATATAACCAAGTCATGGGATTCTTGCTGAAGGTCAAGCGAGCAAAGTTTGTACTGGATAAAGCTAGAAGATGGATGTGGAAGGGTAGAGGCAGGGCAGCGAACAGCTTTAAGCATCACTGGTTAGTGGAGCAGAAACTTCTCCATTTTGTGGATGCGTTTCACCAGTATGTGATGGACAGAGTGTATCACAATGCATGGCGTGAACTTTGTGAAGGTATGGCAGCCGCTCGTTCTCTGGATGAAGTCATTGAAGTACATGAGTCGTACTTGTTGTCAATTCAGCGACAGTGCTTTGTAGTTCCAGATAAGCTGTGGGCTCTCATTGCAACCAGGATAAACAACATTTTGGGATTAGCATTGGACTTTTACTCTATACAGCTGACACTCAGTGGTGGAGCAGTTTCTGCAATCAAGGCCAAATGTGAAATGGAAGTTGAACGTATTGAGAAACAGTTTGATGATTGCATCGCTTTTCTGCTCAGAGTACTCTCCTTCAAACTCAATGTAGGACACTTCCCTCATTTAGCAGATTTGGTTACTAGGATCAACTACAACCACTTTTACATGTCAGATACTGGAAACCTAAGGACTCTCCCAAGCTCTGAAAATGTTGCTTCTAGACTGGGAAAAGCTTTTTTAGGTAGAACAGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005938 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009653 GO:0009893 GO:0009987 GO:0010562 GO:0010604 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0030587 GO:0031098 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0032502 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0048518 GO:0048522 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051703 GO:0051704 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071944 GO:0080090 GO:0090702 GO:0099120 GO:0099568 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Spc97_Spc98

Protein Analysis

1824

Amino Acids

202.29

Weight (kDa)

8.11

Isoelectric Point (pI)

51.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	445 - 701	1e-56	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	448 - 696	1.2e-35	Protein tyrosine and serine/threonine kinase
GCP5-Mod21_C	PF20685	889 - 942	9e-06	Gamma-Tubulin ring complex non-core subunit mod21, C-terminal
GCP_N_terminal	PF17681	893 - 1190	1.8e-20	Gamma tubulin complex component N-terminal
GCP_C_terminal	PF04130	1457 - 1795	3.2e-60	Gamma tubulin complex component C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0004380)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20570 AT1G20570 AT1G20570 AT1G20570 AT1G80260 AT1G80260 AT1G80260
fragaria_vesca	FvH4_2g40750 FvH4_2g40750 FvH4_2g40750
malus_domestica	MD15G1036000.v1.1
prunus_persica	Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1
pyrus_communis	pycom15g03350
rosa_chinensis	RchiOBHm_Chr6g0299841
rosa_laevigata	RLG00000011384
rosa_multiflora	Rmu_ssc0000048.1_g000001
rosa_roxburghii	Rroxscaffold_7G00168330
rosa_rugosa	Rorug06G0292600
rosa_samantha	Rh6AG403800 Rh6BG412100 Rh6CG418200 Rh6DG405000
rosa_wichuraiana	Rw6G035330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	903
AarI	CACCTGC	2 cut(s)	2246, 4306
Acc36I	ACCTGC	4 cut(s)	2246, 3650, 3689, 4306
Acc65I	GGTACC	2 cut(s)	348, 1361
AccB1I	GGYRCC	3 cut(s)	348, 1361, 2177
AccB7I	CCANNNNNTGG	2 cut(s)	4834, 4969
AccBSI	CCGCTC	2 cut(s)	4004, 5048
AccI	GTMKAC	1 cut(s)	3852
AccII	CGCG	5 cut(s)	331, 1021, 2208, 2280, 2282
AccIII	TCCGGA	1 cut(s)	592
AclI	AACGTT	1 cut(s)	2291
AcoI	YGGCCR	4 cut(s)	2407, 3021, 4041, 4781
AcsI	RAATTY	6 cut(s)	469, 1744, 1946, 2027, 2107, 3964
AcuI	CTGAAG	3 cut(s)	1162, 2334, 4868
AcvI	CACGTG	1 cut(s)	2265
AdeI	CACNNNGTG	1 cut(s)	5210
AfiI	CCNNNNNNNGG	8 cut(s)	647, 1675, 1788, 2064, 2252, 2313, 4834, 4969
AflII	CTTAAG	1 cut(s)	2936
AflIII	ACRYGT	2 cut(s)	883, 5385
AgeI	ACCGGT	1 cut(s)	691
AhdI	GACNNNNNGTC	1 cut(s)	1128
AjiI	CACGTC	1 cut(s)	1358
AjnI	CCWGG	6 cut(s)	40, 1240, 1724, 2180, 3814, 5150
AjuI	GAANNNNNNNTTGG	2 cut(s)	1921, 1953
Alw21I	GWGCWC	4 cut(s)	802, 985, 2345, 4188
AlwNI	CAGNNNCTG	2 cut(s)	5225, 5396
Ama87I	CYCGRG	4 cut(s)	353, 362, 2139, 2249
Aor13HI	TCCGGA	1 cut(s)	592
ApoI	RAATTY	6 cut(s)	469, 1744, 1946, 2027, 2107, 3964
AsiGI	ACCGGT	1 cut(s)	691
Asp700I	GAANNNNTTC	3 cut(s)	1578, 2436, 4092
Asp718I	GGTACC	2 cut(s)	348, 1361
AspLEI	GCGC	4 cut(s)	25, 333, 1023, 2282
AspS9I	GGNCC	6 cut(s)	385, 496, 529, 563, 1404, 1955
AsuC2I	CCSGG	5 cut(s)	282, 389, 483, 1587, 1991
AsuII	TTCGAA	1 cut(s)	3626
AvaI	CYCGRG	4 cut(s)	353, 362, 2139, 2249
AvaII	GGWCC	1 cut(s)	385
AxyI	CCTNAGG	2 cut(s)	1827, 5405
BalI	TGGCCA	2 cut(s)	3023, 4783
BamHI	GGATCC	2 cut(s)	367, 1039
BanI	GGYRCC	3 cut(s)	348, 1361, 2177
BanII	GRGCYC	4 cut(s)	362, 2345, 4188, 5140
BarI	GAAGNNNNNNTAC	2 cut(s)	332, 364
BauI	CACGAG	2 cut(s)	2310, 2443
BbrPI	CACGTG	1 cut(s)	2265
BbsI	GAAGAC	3 cut(s)	504, 1703, 2789
Bbv12I	GWGCWC	4 cut(s)	802, 985, 2345, 4188
BbvCI	CCTCAGC	1 cut(s)	26
BceAI	ACGGC	4 cut(s)	85, 335, 1252, 2623
BcgI	CGANNNNNNTGC	8 cut(s)	522, 556, 653, 687, 2230, 2264, 2861, 2895
BciT130I	CCWGG	6 cut(s)	42, 1242, 1726, 2182, 3816, 5152
BciVI	GTATCC	2 cut(s)	2735, 4651
BclI	TGATCA	3 cut(s)	1552, 2089, 2116
BcnI	CCSGG	5 cut(s)	282, 389, 483, 1587, 1991
BfmI	CTRYAG	4 cut(s)	1455, 2013, 4427, 4757
BfrI	CTTAAG	1 cut(s)	2936
BfuAI	ACCTGC	4 cut(s)	2246, 3650, 3689, 4306
BfuI	GTATCC	2 cut(s)	2735, 4651
BglII	AGATCT	1 cut(s)	2601
BmcAI	AGTACT	3 cut(s)	1529, 4261, 5307
Bme18I	GGWCC	1 cut(s)	385
BmeRI	GACNNNNNGTC	1 cut(s)	1128
BmeT110I	CYCGRG	4 cut(s)	353, 362, 2139, 2249
BmgBI	CACGTC	1 cut(s)	1358
BmgT120I	GGNCC	6 cut(s)	385, 496, 529, 563, 1404, 1955
BmrI	ACTGGG	4 cut(s)	1044, 1410, 2772, 5453
BmuI	ACTGGG	4 cut(s)	1044, 1410, 2772, 5453
BoxI	GACNNNNGTC	1 cut(s)	3858
BpiI	GAAGAC	3 cut(s)	504, 1703, 2789
BplI	GAGNNNNNCTC	4 cut(s)	2875, 2907, 4246, 4278
BpmI	CTGGAG	1 cut(s)	1263
Bpu10I	CCTNAGC	2 cut(s)	26, 3046
Bpu14I	TTCGAA	1 cut(s)	3626
BpuEI	CTTGAG	5 cut(s)	805, 985, 991, 2568, 2674
BpuMI	CCSGG	5 cut(s)	282, 389, 483, 1587, 1991
BsaAI	YACGTR	1 cut(s)	2265
BsaBI	GATNNNNATC	3 cut(s)	1074, 1860, 1866
BsaI	GGTCTC	6 cut(s)	271, 510, 601, 1605, 2469, 4780
BsaWI	WCCGGW	5 cut(s)	592, 603, 691, 937, 3754
BsaXI	ACNNNNNCTCC	8 cut(s)	1126, 1156, 1236, 1266, 1885, 1915, 3047, 3077
Bsc4I	CCNNNNNNNGG	8 cut(s)	647, 1675, 1788, 2064, 2252, 2313, 4834, 4969
Bse118I	RCCGGY	2 cut(s)	691, 2221
Bse21I	CCTNAGG	2 cut(s)	1827, 5405
Bse3DI	GCAATG	5 cut(s)	18, 1422, 3654, 4678, 5142
Bse8I	GATNNNNATC	3 cut(s)	1074, 1860, 1866
BseAI	TCCGGA	1 cut(s)	592
BseBI	CCWGG	6 cut(s)	42, 1242, 1726, 2182, 3816, 5152
BseJI	GATNNNNATC	3 cut(s)	1074, 1860, 1866
BseLI	CCNNNNNNNGG	8 cut(s)	647, 1675, 1788, 2064, 2252, 2313, 4834, 4969
BseMI	GCAATG	5 cut(s)	18, 1422, 3654, 4678, 5142
BseRI	GAGGAG	8 cut(s)	244, 247, 250, 535, 2638, 2883, 3323, 4698
BseYI	CCCAGC	1 cut(s)	560
BsgI	GTGCAG	3 cut(s)	1544, 1964, 4304
Bsh1236I	CGCG	5 cut(s)	331, 1021, 2208, 2280, 2282
Bsh1285I	CGRYCG	2 cut(s)	519, 3531
BshNI	GGYRCC	3 cut(s)	348, 1361, 2177
BshTI	ACCGGT	1 cut(s)	691
BsiEI	CGRYCG	2 cut(s)	519, 3531
BsiHKAI	GWGCWC	4 cut(s)	802, 985, 2345, 4188
BsiHKCI	CYCGRG	4 cut(s)	353, 362, 2139, 2249
BslFI	GGGAC	4 cut(s)	371, 990, 1116, 3846
BslI	CCNNNNNNNGG	8 cut(s)	647, 1675, 1788, 2064, 2252, 2313, 4834, 4969
BsmFI	GGGAC	4 cut(s)	371, 990, 1116, 3846
BsmI	GAATGC	2 cut(s)	48, 2575
Bso31I	GGTCTC	6 cut(s)	271, 510, 601, 1605, 2469, 4780
BsoBI	CYCGRG	4 cut(s)	353, 362, 2139, 2249
Bsp119I	TTCGAA	1 cut(s)	3626
Bsp1286I	GDGCHC	6 cut(s)	362, 802, 985, 2345, 4188, 5140
Bsp13I	TCCGGA	1 cut(s)	592
Bsp19I	CCATGG	2 cut(s)	500, 2620
BspEI	TCCGGA	1 cut(s)	592
BspFNI	CGCG	5 cut(s)	331, 1021, 2208, 2280, 2282
BspHI	TCATGA	2 cut(s)	1056, 4552
BspMAI	CTGCAG	2 cut(s)	1459, 2017
BspMI	ACCTGC	4 cut(s)	2246, 3650, 3689, 4306
BspQI	GCTCTTC	3 cut(s)	650, 2406, 3362
BspT104I	TTCGAA	1 cut(s)	3626
BspT107I	GGYRCC	3 cut(s)	348, 1361, 2177
BspTI	CTTAAG	1 cut(s)	2936
BspTNI	GGTCTC	6 cut(s)	271, 510, 601, 1605, 2469, 4780
BsrBI	CCGCTC	2 cut(s)	4004, 5048
BsrDI	GCAATG	5 cut(s)	18, 1422, 3654, 4678, 5142
BsrFI	RCCGGY	2 cut(s)	691, 2221
BssAI	RCCGGY	2 cut(s)	691, 2221
BssSI	CACGAG	2 cut(s)	2310, 2443
BssT1I	CCWWGG	4 cut(s)	500, 1937, 2620, 3803
Bst2BI	CACGAG	2 cut(s)	2310, 2443
Bst2UI	CCWGG	6 cut(s)	42, 1242, 1726, 2182, 3816, 5152
Bst6I	CTCTTC	8 cut(s)	553, 650, 2406, 3144, 3362, 3822, 4152, 4548
BstAFI	CTTAAG	1 cut(s)	2936
BstAPI	GCANNNNNTGC	5 cut(s)	2238, 2570, 3073, 4516, 5225
BstBAI	YACGTR	1 cut(s)	2265
BstBI	TTCGAA	1 cut(s)	3626
BstDSI	CCRYGG	6 cut(s)	317, 500, 1669, 2620, 3643, 4272
BstFNI	CGCG	5 cut(s)	331, 1021, 2208, 2280, 2282
BstHHI	GCGC	4 cut(s)	25, 333, 1023, 2282
BstMCI	CGRYCG	2 cut(s)	519, 3531
BstNI	CCWGG	6 cut(s)	42, 1242, 1726, 2182, 3816, 5152
BstNSI	RCATGY	4 cut(s)	887, 4180, 4340, 5389
BstPAI	GACNNNNGTC	1 cut(s)	3858
BstSFI	CTRYAG	4 cut(s)	1455, 2013, 4427, 4757
BstUI	CGCG	5 cut(s)	331, 1021, 2208, 2280, 2282
BstV2I	GAAGAC	3 cut(s)	504, 1703, 2789
BstX2I	RGATCY	4 cut(s)	367, 1039, 2601, 3872
BstYI	RGATCY	4 cut(s)	367, 1039, 2601, 3872
Bsu36I	CCTNAGG	2 cut(s)	1827, 5405
BsuI	GTATCC	2 cut(s)	2735, 4651
BtgI	CCRYGG	6 cut(s)	317, 500, 1669, 2620, 3643, 4272
BtgZI	GCGATG	2 cut(s)	390, 5272
BtrI	CACGTC	1 cut(s)	1358
BtsI	GCAGTG	4 cut(s)	307, 936, 1215, 4392
BveI	ACCTGC	4 cut(s)	2246, 3650, 3689, 4306
CaiI	CAGNNNCTG	2 cut(s)	5225, 5396
CciI	TCATGA	2 cut(s)	1056, 4552
CfoI	GCGC	4 cut(s)	25, 333, 1023, 2282
Cfr10I	RCCGGY	2 cut(s)	691, 2221
Cfr13I	GGNCC	6 cut(s)	385, 496, 529, 563, 1404, 1955
CseI	GACGC	2 cut(s)	607, 649
CspAI	ACCGGT	1 cut(s)	691
CspCI	CAANNNNNGTGG	4 cut(s)	564, 599, 840, 875
DraI	TTTAAA	2 cut(s)	2961, 3984
DraIII	CACNNNGTG	1 cut(s)	5210
DriI	GACNNNNNGTC	1 cut(s)	1128
EaeI	YGGCCR	4 cut(s)	2407, 3021, 4041, 4781
Eam1104I	CTCTTC	8 cut(s)	553, 650, 2406, 3144, 3362, 3822, 4152, 4548
Eam1105I	GACNNNNNGTC	1 cut(s)	1128
EarI	CTCTTC	8 cut(s)	553, 650, 2406, 3144, 3362, 3822, 4152, 4548
Ecl136II	GAGCTC	2 cut(s)	2343, 4186
Eco130I	CCWWGG	4 cut(s)	500, 1937, 2620, 3803
Eco24I	GRGCYC	4 cut(s)	362, 2345, 4188, 5140
Eco31I	GGTCTC	6 cut(s)	271, 510, 601, 1605, 2469, 4780
Eco47I	GGWCC	1 cut(s)	385
Eco53kI	GAGCTC	2 cut(s)	2343, 4186
Eco57I	CTGAAG	3 cut(s)	1162, 2334, 4868
Eco72I	CACGTG	1 cut(s)	2265
Eco81I	CCTNAGG	2 cut(s)	1827, 5405
Eco88I	CYCGRG	4 cut(s)	353, 362, 2139, 2249
EcoICRI	GAGCTC	2 cut(s)	2343, 4186
EcoO109I	RGGNCCY	2 cut(s)	385, 1404
EcoRI	GAATTC	1 cut(s)	2027
EcoRII	CCWGG	6 cut(s)	40, 1240, 1724, 2180, 3814, 5150
EcoT14I	CCWWGG	4 cut(s)	500, 1937, 2620, 3803
EcoT22I	ATGCAT	4 cut(s)	1284, 1762, 3940, 5017
EcoT38I	GRGCYC	4 cut(s)	362, 2345, 4188, 5140
ErhI	CCWWGG	4 cut(s)	500, 1937, 2620, 3803
FalI	AAGNNNNNCTT	8 cut(s)	2463, 2495, 3168, 3200, 3276, 3308, 3341, 3373
FaqI	GGGAC	4 cut(s)	371, 990, 1116, 3846
FauI	CCCGC	6 cut(s)	731, 1015, 1026, 1664, 2065, 3384
FbaI	TGATCA	3 cut(s)	1552, 2089, 2116
FblI	GTMKAC	1 cut(s)	3852
FriOI	GRGCYC	4 cut(s)	362, 2345, 4188, 5140
GlaI	GCGC	4 cut(s)	24, 332, 1022, 2281
GsaI	CCCAGC	1 cut(s)	564
GsuI	CTGGAG	1 cut(s)	1263
HgaI	GACGC	2 cut(s)	607, 649
HhaI	GCGC	4 cut(s)	25, 333, 1023, 2282
Hin6I	GCGC	4 cut(s)	23, 331, 1021, 2280
HinP1I	GCGC	4 cut(s)	23, 331, 1021, 2280
HincII	GTYRAC	4 cut(s)	310, 2497, 2863, 3135
HindII	GTYRAC	4 cut(s)	310, 2497, 2863, 3135
HindIII	AAGCTT	1 cut(s)	5451
HpaI	GTTAAC	1 cut(s)	310
Hpy99I	CGWCG	2 cut(s)	71, 665
HpyCH4IV	ACGT	6 cut(s)	955, 1357, 2264, 2291, 3408, 5260
HpySE526I	ACGT	6 cut(s)	955, 1357, 2264, 2291, 3408, 5260
HspAI	GCGC	4 cut(s)	23, 331, 1021, 2280
KflI	GGGWCCC	1 cut(s)	385
Kpn2I	TCCGGA	1 cut(s)	592
KpnI	GGTACC	2 cut(s)	352, 1365
Ksp22I	TGATCA	3 cut(s)	1552, 2089, 2116
KspAI	GTTAAC	1 cut(s)	310
LguI	GCTCTTC	3 cut(s)	650, 2406, 3362
MaeII	ACGT	6 cut(s)	955, 1357, 2264, 2291, 3408, 5260
MbiI	CCGCTC	2 cut(s)	4004, 5048
MfeI	CAATTG	1 cut(s)	1472
MflI	RGATCY	4 cut(s)	367, 1039, 2601, 3872
MhlI	GDGCHC	6 cut(s)	362, 802, 985, 2345, 4188, 5140
MlsI	TGGCCA	2 cut(s)	3023, 4783
MluNI	TGGCCA	2 cut(s)	3023, 4783
MmeI	TCCRAC	1 cut(s)	1010
Mox20I	TGGCCA	2 cut(s)	3023, 4783
Mph1103I	ATGCAT	4 cut(s)	1284, 1762, 3940, 5017
MroI	TCCGGA	1 cut(s)	592
MroXI	GAANNNNTTC	3 cut(s)	1578, 2436, 4092
MscI	TGGCCA	2 cut(s)	3023, 4783
MslI	CAYNNNNRTG	3 cut(s)	1916, 2559, 4986
Msp20I	TGGCCA	2 cut(s)	3023, 4783
MspA1I	CMGCKG	3 cut(s)	3539, 3556, 5200
MspCI	CTTAAG	1 cut(s)	2936
MunI	CAATTG	1 cut(s)	1472
Mva1269I	GAATGC	2 cut(s)	48, 2575
MvaI	CCWGG	6 cut(s)	42, 1242, 1726, 2182, 3816, 5152
MvnI	CGCG	5 cut(s)	331, 1021, 2208, 2280, 2282
NciI	CCSGG	5 cut(s)	282, 389, 483, 1587, 1991
NcoI	CCATGG	2 cut(s)	500, 2620
NmeAIII	GCCGAG	3 cut(s)	506, 743, 2385
NmuCI	GTSAC	5 cut(s)	521, 879, 933, 1107, 2540
NsiI	ATGCAT	4 cut(s)	1284, 1762, 3940, 5017
NspI	RCATGY	4 cut(s)	887, 4180, 4340, 5389
NspV	TTCGAA	1 cut(s)	3626
PaeR7I	CTCGAG	2 cut(s)	353, 2249
PagI	TCATGA	2 cut(s)	1056, 4552
PaqCI	CACCTGC	2 cut(s)	2246, 4306
PasI	CCCWGGG	1 cut(s)	41
PciI	ACATGT	2 cut(s)	883, 5385
PciSI	GCTCTTC	3 cut(s)	650, 2406, 3362
PcsI	WCGNNNNNNNCGW	2 cut(s)	360, 4717
PctI	GAATGC	2 cut(s)	48, 2575
PdmI	GAANNNNTTC	3 cut(s)	1578, 2436, 4092
PfeI	GAWTC	8 cut(s)	1634, 3269, 3485, 4082, 4237, 4583, 4628, 4839
PflFI	GACNNNGTC	1 cut(s)	617
PflMI	CCANNNNNTGG	2 cut(s)	4834, 4969
PfoI	TCCNGGA	2 cut(s)	387, 1240
PinAI	ACCGGT	1 cut(s)	691
Ple19I	CGATCG	1 cut(s)	3531
PmaCI	CACGTG	1 cut(s)	2265
PmlI	CACGTG	1 cut(s)	2265
Ppu21I	YACGTR	1 cut(s)	2265
PpuMI	RGGWCCY	1 cut(s)	385
PscI	ACATGT	2 cut(s)	883, 5385
PshAI	GACNNNNGTC	1 cut(s)	3858
PsiI	TTATAA	1 cut(s)	903
Psp124BI	GAGCTC	2 cut(s)	2345, 4188
Psp1406I	AACGTT	1 cut(s)	2291
Psp5II	RGGWCCY	1 cut(s)	385
Psp6I	CCWGG	6 cut(s)	40, 1240, 1724, 2180, 3814, 5150
PspCI	CACGTG	1 cut(s)	2265
PspFI	CCCAGC	1 cut(s)	560
PspGI	CCWGG	6 cut(s)	40, 1240, 1724, 2180, 3814, 5150
PspPI	GGNCC	6 cut(s)	385, 496, 529, 563, 1404, 1955
PspPPI	RGGWCCY	1 cut(s)	385
PsrI	GAACNNNNNNTAC	6 cut(s)	202, 234, 2989, 3021, 4042, 4074
PstI	CTGCAG	2 cut(s)	1459, 2017
PstNI	CAGNNNCTG	2 cut(s)	5225, 5396
PsuI	RGATCY	4 cut(s)	367, 1039, 2601, 3872
PsyI	GACNNNGTC	1 cut(s)	617
PvuI	CGATCG	1 cut(s)	3531
PvuII	CAGCTG	2 cut(s)	3556, 5200
RseI	CAYNNNNRTG	3 cut(s)	1916, 2559, 4986
SacI	GAGCTC	2 cut(s)	2345, 4188
SapI	GCTCTTC	3 cut(s)	650, 2406, 3362
Sau96I	GGNCC	6 cut(s)	385, 496, 529, 563, 1404, 1955
ScaI	AGTACT	3 cut(s)	1529, 4261, 5307
SduI	GDGCHC	6 cut(s)	362, 802, 985, 2345, 4188, 5140
SfcI	CTRYAG	4 cut(s)	1455, 2013, 4427, 4757
Sfr274I	CTCGAG	2 cut(s)	353, 2249
SfuI	TTCGAA	1 cut(s)	3626
SgrAI	CRCCGGYG	1 cut(s)	691
SinI	GGWCC	1 cut(s)	385
SlaI	CTCGAG	2 cut(s)	353, 2249
SmiMI	CAYNNNNRTG	3 cut(s)	1916, 2559, 4986
SmlI	CTYRAG	8 cut(s)	353, 820, 970, 1000, 2249, 2583, 2653, 2936
SmoI	CTYRAG	8 cut(s)	353, 820, 970, 1000, 2249, 2583, 2653, 2936
SspI	AATATT	1 cut(s)	1519
SstI	GAGCTC	2 cut(s)	2345, 4188
StyI	CCWWGG	4 cut(s)	500, 1937, 2620, 3803
TaiI	ACGT	6 cut(s)	958, 1360, 2267, 2294, 3411, 5263
TaqII	GACCGA	2 cut(s)	498, 505
TatI	WGTACW	5 cut(s)	1527, 4259, 4870, 5074, 5305
TauI	GCSGC	7 cut(s)	300, 325, 589, 1267, 2285, 4007, 5048
TfiI	GAWTC	8 cut(s)	1634, 3269, 3485, 4082, 4237, 4583, 4628, 4839
TseFI	GTSAC	5 cut(s)	521, 879, 933, 1107, 2540
Tsp45I	GTSAC	5 cut(s)	521, 879, 933, 1107, 2540
TspGWI	ACGGA	5 cut(s)	438, 1487, 1627, 1658, 3489
Tth111I	GACNNNGTC	1 cut(s)	617
Van91I	CCANNNNNTGG	2 cut(s)	4834, 4969
Vha464I	CTTAAG	1 cut(s)	2936
VpaK11BI	GGWCC	1 cut(s)	385
XapI	RAATTY	6 cut(s)	469, 1744, 1946, 2027, 2107, 3964
XbaI	TCTAGA	3 cut(s)	3959, 4220, 5438
XceI	RCATGY	4 cut(s)	887, 4180, 4340, 5389
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1667, 5130, 5245
XhoI	CTCGAG	2 cut(s)	353, 2249
XmiI	GTMKAC	1 cut(s)	3852
XmnI	GAANNNNTTC	3 cut(s)	1578, 2436, 4092
ZrmI	AGTACT	3 cut(s)	1529, 4261, 5307
Zsp2I	ATGCAT	4 cut(s)	1284, 1762, 3940, 5017

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.