Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0004380

Physical Location & Seq

Genomic Coordinates Forward (+)

9030796 .. 9036063

Gene Structure 5268 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000011384

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2883 bp

ATGGGGAAGCCTCTCTTCTACGATGCAGGGAATGCAGAAGTTTCTCAAGCTCTAATCAACAAGATCTACGGCGTTTTCTCCCATGGCCTCCATTTCGCAACACCAGTCTCCTCCTTGAGAACCAATGAACTCGATTTGGTTCGGAGTGTGTTACAAATGTTACAAGGATATTCCAGTTCACTATTTTATTGGGATCATAATGGAAACTCTTTTCAAGCCAAAACTGGGATATATGTTAATCACCTCTCCCATACAAGTCTTCACGCCATTGTCAGTCAGTTTATGTATGCTGCAACTTGCTTGCAACTCATAGAAATTGTGGTCAACAAAGTCGAGAAATCTGCGAGATTACCTCCTCCTACTTTGAGGGCTTTTGTGTGTTCTGTTTCTGCATGGCTTAAGGTATGCTGCCATTCAATTTTCCCGTTTCTGCTTGGACAGAGTCTATGCTCAGGTGCGGAGTCTCTGTTGCAAATAGTGCATTGTGCCATTCCCCAAGTGTATTTTGAGTCCGGTCCTTCTCTTTCTGCTGCTGAGTTGACTCTTCATGTCCTTGACTCTCTTTACAAGAAACTAGATGAAGTATGCCTTGTCCGAGGTGGTGAGGACGAAGATTACCAGATGTTACTTCATTTATTTATTGGAAGTATATTGCCATACATTGAGGGTCTTGATTCCTGGCTTTTTGAAGGAACACTTGATGATCCCTATGAGGAGATGTTCTTCTATCCCAATAGAGCAGTTTCAGTTGATAAGGCTGACTTCTGGGAGAAGAGCTATCTATTGAGGCAAGTGCGGGGTCATATCTTAGACGTTGGGTGTGCTGCTCCATCTCTTGCCAGTGACCATGCATCTGTAATAAATGACAAAAGGGGAGTGGGTCAGAGGGAATCCATCTCATGTCCGTTGTTTATTAAGGACATAGCTAAGTCAATCGTTTCTGCTGGAAAATCATTACAGCTGATCCGGCATATTCCTATGACTTCTTTAGGTGAAGGAAATTACTGTGCGATTGATGGTTTTGTCAGTTCGAATAAAGGTGTTCACCGTGGGGAGAGCATTGCAGGTTTAACTTTGTCAGAAGTTTTTTGCGTGTCATTAGCAGGTCTTGTAGGACATGGCGATCATATCTTTCAGTCTATTGCAAGTAAACAAAAACCGGAAAGTGATGATGGTGTGATTGAGTCAGTAAGAAGCTCAGAAAAACCTTGGTGTAAGTTCTTGGTTGATACGCTGTTGGAAAAAAGATTGATTGAAACCAACTCTCCACATGCGGATGGAAAAGCATTCCCTGGTGCGAAAGAAGAGTGTATGTTTTCAGATTTGGTAGACGAATGTCCCCTTTCAAGATCCTTCTGTCAAGAAAATCCAGCTACAACAGTCTGCCAAAAAATTCTTTCTAAGAATGGGGATGCATGGAAAACCTTGAACTTATCTAGAAATTTTAGCCTGCCCCCTTTAAATGATGAAGTTCTACGAGCGGCTATATTTGGCGGGGATAGTGGATCAACTTCTTCGGCCAAAGGAACCAACTATACATTTGGTTTTCGGTTTGGTGAATCTGAACATATTCGTTCACAAGACGACTCAAAAATGCTACAAATGTTGTTTCCTTTTCCCACTCTTCTTCCTTCTTTTGAGGATGATCTCCGCATGTCAGAGCTCTTACCTTTCCAGAAAAATAGCACCCTTCCATCTAGAGTTCTTACTTGGATTCAGTATTTTGAACCAAGAAGTACTCCACTTCCCCTGGTTATAGTGCAGGAATGTCTTACTGCCTACATTCAGAAGCAGGTGGATTGTATTGGCAGGCATGTATTGTCGAAATTAATGAATGATTGGAAGTTGATGGATGAACTGGCAGTGTTGCGTGCTATTTACTTGTTGGGGTCAGGTGATCTACTACAGCACTTCTTGACCATAATTTTCAATAAGCTGGATAAAGGAGAAACATGGGATGATGATTTCGAGTTAAACACTATATTGCAGGAATCTATAAGAAACTCTGCTGATGGTGTGCTACTAAGTGTTCCTGATTCATTGATTGTATCCCTCACCAAAAATCAAGATTTGAATGGCAATGAGCAGCCTAGTATGGCTTCCCTTCCCTCAACTCCTCGTAAAAGTCGTGCTAACAGCTTTGGAATGGATGGACTTGATCTACTACAGTTTACATACAAGGTCTCTTGGCCACTTGAACTTATTGCAAATGCAGAAGCGATCAAGAAATATAACCAAGTCATGGGATTCTTGCTGAAGGTCAAGCGAGCAAAGTTTGTACTGGATAAAGCTCGAAGATGGATGTGGAAGGGTAGAGGCAGGGCAGCGAACAGCTTTAAGCATCACTGGTTAGTGGAGCAGAAACTTCTCCATTTTGTGGATGCGTTTCACCAGTATGTGATGGACAGAGTGTATCACAATGCATGGCGTGAACTTTGTGAAGGTATGGCAGCCGCTCGTTCTCTGGATGAAGTCATTGAAGTACATGAGTCGTACTTGTTGTCAATTCAGCGACAGTGCTTTGTAGTTCCAGATAAGCTGTGGGCTCTCATTGCAACCAGGATAAACAACATTTTGGGATTAGCATTGGACTTTTACTCTATACAGCTGACACTTAGTGGTGGAGCAGTTTCTGCAATCAAGGCCAAATGTGAAATGGAAGTTGAACGTATTGAGAAACAGTTTGATGATTGCATCGCTTTTCTGCTCAGAGTACTCTCCTTCAAACTCAATGTAGGACACTTCCCTCATTTAGCAGATTTGGTTACTAGGATCAACTACAACCACTTTTACATGTCAGATACTGGAAACCTAAGGACTCTCCCAAGCTCTGAAAATGTTGCTTCTAGACTGGGAAAAGCTTTTTTAGGTAGAACAGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005938 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009653 GO:0009893 GO:0009987 GO:0010562 GO:0010604 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0030587 GO:0031098 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0032502 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0048518 GO:0048522 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051703 GO:0051704 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071944 GO:0080090 GO:0090702 GO:0099120 GO:0099568 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Spc97_Spc98

Protein Analysis

961

Amino Acids

107.57

Weight (kDa)

6.1

Isoelectric Point (pI)

43.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GCP5-Mod21_C	PF20685	43 - 96	6e-06	Gamma-Tubulin ring complex non-core subunit mod21, C-terminal
GCP_N_terminal	PF17681	47 - 336	1.3e-16	Gamma tubulin complex component N-terminal
GCP_C_terminal	PF04130	616 - 931	2.1e-66	Gamma tubulin complex component C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0004380)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20570 AT1G20570 AT1G20570 AT1G20570 AT1G80260 AT1G80260 AT1G80260
fragaria_vesca	FvH4_2g40750 FvH4_2g40750 FvH4_2g40750
malus_domestica	MD15G1036000.v1.1
prunus_persica	Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1
pyrus_communis	pycom15g03350
rosa_chinensis	RchiOBHm_Chr6g0299841
rosa_laevigata	RLG00000011384
rosa_multiflora	Rmu_ssc0000048.1_g000001
rosa_roxburghii	Rroxscaffold_7G00168330
rosa_rugosa	Rorug06G0292600
rosa_samantha	Rh6AG403800 Rh6BG412100 Rh6CG418200 Rh6DG405000
rosa_wichuraiana	Rw6G035330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1783
Acc36I	ACCTGC	3 cut(s)	1055, 1094, 1783
AccB7I	CCANNNNNTGG	2 cut(s)	2242, 2377
AccBSI	CCGCTC	2 cut(s)	1481, 2456
AccI	GTMKAC	1 cut(s)	1329
AciI	CCGC	7 cut(s)	458, 796, 1274, 1481, 1494, 1651, 2454
AclWI	GGATC	6 cut(s)	201, 698, 958, 1344, 1513, 2780
AcoI	YGGCCR	2 cut(s)	1518, 2189
AcsI	RAATTY	2 cut(s)	1392, 1441
AcuI	CTGAAG	1 cut(s)	2276
AdeI	CACNNNGTG	1 cut(s)	2618
AfaI	GTAC	5 cut(s)	1738, 2280, 2484, 2495, 2715
AfiI	CCNNNNNNNGG	3 cut(s)	225, 2242, 2377
AflII	CTTAAG	1 cut(s)	398
AflIII	ACRYGT	1 cut(s)	2793
AjnI	CCWGG	4 cut(s)	677, 1291, 1749, 2558
Alw21I	GWGCWC	1 cut(s)	1665
Alw26I	GTCTC	3 cut(s)	112, 468, 2188
AlwI	GGATC	6 cut(s)	201, 698, 958, 1344, 1513, 2780
AlwNI	CAGNNNCTG	2 cut(s)	2633, 2804
AoxI	GGCC	4 cut(s)	85, 1518, 2189, 2643
ApeKI	GCWGC	7 cut(s)	290, 408, 530, 824, 2086, 2324, 2450
ApoI	RAATTY	2 cut(s)	1392, 1441
AseI	ATTAAT	1 cut(s)	1829
Asp700I	GAANNNNTTC	1 cut(s)	1569
AspS9I	GGNCC	1 cut(s)	515
AsuHPI	GGTGA	8 cut(s)	233, 614, 1004, 1037, 1568, 1907, 2047, 2381
AsuII	TTCGAA	1 cut(s)	1031
AvaII	GGWCC	1 cut(s)	515
AxyI	CCTNAGG	1 cut(s)	2813
BalI	TGGCCA	1 cut(s)	2191
BanII	GRGCYC	2 cut(s)	1665, 2548
BbsI	GAAGAC	1 cut(s)	251
Bbv12I	GWGCWC	1 cut(s)	1665
BbvI	GCAGC	7 cut(s)	277, 395, 517, 811, 2098, 2336, 2462
BceAI	ACGGC	1 cut(s)	85
BcgI	CGANNNNNNTGC	2 cut(s)	323, 357
BciT130I	CCWGG	4 cut(s)	679, 1293, 1751, 2560
BciVI	GTATCC	1 cut(s)	2059
BcoDI	GTCTC	3 cut(s)	112, 468, 2188
BfaI	CTAG	6 cut(s)	575, 1437, 1698, 2091, 2769, 2847
BfmI	CTRYAG	2 cut(s)	1904, 2165
BfrI	CTTAAG	1 cut(s)	398
BfuAI	ACCTGC	3 cut(s)	1055, 1094, 1783
BfuI	GTATCC	1 cut(s)	2059
BglII	AGATCT	1 cut(s)	63
BisI	GCNGC	9 cut(s)	291, 409, 531, 825, 1482, 2087, 2325, 2451, 2454
BlsI	GCNGC	9 cut(s)	292, 410, 532, 826, 1483, 2088, 2326, 2452, 2455
BmcAI	AGTACT	2 cut(s)	1738, 2715
Bme1390I	CCNGG	4 cut(s)	679, 1293, 1751, 2560
Bme18I	GGWCC	1 cut(s)	515
BmgT120I	GGNCC	1 cut(s)	515
BmiI	GGNNCC	1 cut(s)	1528
BmrFI	CCNGG	4 cut(s)	679, 1293, 1751, 2560
BmrI	ACTGGG	2 cut(s)	234, 2861
BmsI	GCATC	6 cut(s)	13, 860, 1402, 2350, 2371, 2703
BmuI	ACTGGG	2 cut(s)	234, 2861
BoxI	GACNNNNGTC	1 cut(s)	1335
BpiI	GAAGAC	1 cut(s)	251
BplI	GAGNNNNNCTC	2 cut(s)	337, 369
Bpu10I	CCTNAGC	1 cut(s)	451
Bpu14I	TTCGAA	1 cut(s)	1031
BpuEI	CTTGAG	2 cut(s)	30, 136
BsaI	GGTCTC	1 cut(s)	2188
BsaJI	CCNNGG	6 cut(s)	82, 595, 1048, 1208, 1291, 1749
BsaWI	WCCGGW	2 cut(s)	512, 1159
BsaXI	ACNNNNNCTCC	4 cut(s)	452, 482, 1249, 1279
Bsc4I	CCNNNNNNNGG	3 cut(s)	225, 2242, 2377
Bse21I	CCTNAGG	1 cut(s)	2813
Bse3DI	GCAATG	3 cut(s)	1059, 2086, 2550
BseBI	CCWGG	4 cut(s)	679, 1293, 1751, 2560
BseDI	CCNNGG	6 cut(s)	82, 595, 1048, 1208, 1291, 1749
BseGI	GGATG	9 cut(s)	1282, 1417, 1648, 1858, 1963, 2155, 2307, 2386, 2473
BseLI	CCNNNNNNNGG	3 cut(s)	225, 2242, 2377
BseMI	GCAATG	3 cut(s)	1059, 2086, 2550
BseMII	CTCAG	4 cut(s)	465, 525, 1212, 2722
BseRI	GAGGAG	4 cut(s)	100, 345, 728, 2106
BseXI	GCAGC	7 cut(s)	277, 395, 517, 811, 2098, 2336, 2462
BsgI	GTGCAG	1 cut(s)	1781
BshFI	GGCC	4 cut(s)	87, 1520, 2191, 2645
BsiHKAI	GWGCWC	1 cut(s)	1665
BsiSI	CCGG	3 cut(s)	513, 967, 1160
BslFI	GGGAC	1 cut(s)	1323
BslI	CCNNNNNNNGG	3 cut(s)	225, 2242, 2377
BsmAI	GTCTC	3 cut(s)	112, 468, 2188
BsmFI	GGGAC	1 cut(s)	1323
BsmI	GAATGC	2 cut(s)	37, 1286
BsnI	GGCC	4 cut(s)	87, 1520, 2191, 2645
Bso31I	GGTCTC	1 cut(s)	2188
Bsp119I	TTCGAA	1 cut(s)	1031
Bsp1286I	GDGCHC	2 cut(s)	1665, 2548
Bsp19I	CCATGG	1 cut(s)	82
BspACI	CCGC	7 cut(s)	458, 796, 1274, 1481, 1494, 1651, 2454
BspANI	GGCC	4 cut(s)	87, 1520, 2191, 2645
BspCNI	CTCAG	4 cut(s)	464, 526, 1211, 2721
BspLI	GGNNCC	1 cut(s)	1528
BspMI	ACCTGC	3 cut(s)	1055, 1094, 1783
BspPI	GGATC	6 cut(s)	201, 698, 958, 1344, 1513, 2780
BspQI	GCTCTTC	1 cut(s)	767
BspT104I	TTCGAA	1 cut(s)	1031
BspTI	CTTAAG	1 cut(s)	398
BspTNI	GGTCTC	1 cut(s)	2188
BsrBI	CCGCTC	2 cut(s)	1481, 2456
BsrDI	GCAATG	3 cut(s)	1059, 2086, 2550
BssECI	CCNNGG	6 cut(s)	82, 595, 1048, 1208, 1291, 1749
BssT1I	CCWWGG	2 cut(s)	82, 1208
Bst2UI	CCWGG	4 cut(s)	679, 1293, 1751, 2560
Bst4CI	ACNGT	6 cut(s)	1007, 1049, 1381, 2169, 2517, 2682
Bst6I	CTCTTC	5 cut(s)	20, 549, 767, 1299, 1629
BstAFI	CTTAAG	1 cut(s)	398
BstAPI	GCANNNNNTGC	3 cut(s)	32, 478, 2633
BstBI	TTCGAA	1 cut(s)	1031
BstC8I	GCNNGC	5 cut(s)	302, 1451, 1811, 1872, 2268
BstDSI	CCRYGG	2 cut(s)	82, 1048
BstF5I	GGATG	9 cut(s)	1282, 1417, 1648, 1858, 1963, 2155, 2307, 2386, 2473
BstMAI	GTCTC	3 cut(s)	112, 468, 2188
BstMWI	GCNNNNNNNGC	6 cut(s)	32, 478, 967, 2552, 2633, 2642
BstNI	CCWGG	4 cut(s)	679, 1293, 1751, 2560
BstNSI	RCATGY	4 cut(s)	1274, 1657, 1817, 2797
BstPAI	GACNNNNGTC	1 cut(s)	1335
BstSCI	CCNGG	4 cut(s)	677, 1291, 1749, 2558
BstSFI	CTRYAG	2 cut(s)	1904, 2165
BstV1I	GCAGC	7 cut(s)	277, 395, 517, 811, 2098, 2336, 2462
BstV2I	GAAGAC	1 cut(s)	251
BstX2I	RGATCY	2 cut(s)	63, 1349
BstYI	RGATCY	2 cut(s)	63, 1349
Bsu36I	CCTNAGG	1 cut(s)	2813
BsuI	GTATCC	1 cut(s)	2059
BsuRI	GGCC	4 cut(s)	87, 1520, 2191, 2645
BtgI	CCRYGG	2 cut(s)	82, 1048
BtgZI	GCGATG	1 cut(s)	2680
BtsCI	GGATG	9 cut(s)	1282, 1417, 1648, 1858, 1963, 2155, 2307, 2386, 2473
BtsI	GCAGTG	1 cut(s)	1869
BtsIMutI	CAGTG	4 cut(s)	847, 1869, 2344, 2522
BveI	ACCTGC	3 cut(s)	1055, 1094, 1783
Cac8I	GCNNGC	5 cut(s)	302, 1451, 1811, 1872, 2268
CaiI	CAGNNNCTG	2 cut(s)	2633, 2804
Cfr13I	GGNCC	1 cut(s)	515
Csp6I	GTAC	5 cut(s)	1737, 2279, 2483, 2494, 2714
CviQI	GTAC	5 cut(s)	1737, 2279, 2483, 2494, 2714
DraI	TTTAAA	1 cut(s)	1461
DraIII	CACNNNGTG	1 cut(s)	2618
EaeI	YGGCCR	2 cut(s)	1518, 2189
Eam1104I	CTCTTC	5 cut(s)	20, 549, 767, 1299, 1629
EarI	CTCTTC	5 cut(s)	20, 549, 767, 1299, 1629
Ecl136II	GAGCTC	1 cut(s)	1663
Eco130I	CCWWGG	2 cut(s)	82, 1208
Eco24I	GRGCYC	2 cut(s)	1665, 2548
Eco31I	GGTCTC	1 cut(s)	2188
Eco47I	GGWCC	1 cut(s)	515
Eco53kI	GAGCTC	1 cut(s)	1663
Eco57I	CTGAAG	1 cut(s)	2276
Eco81I	CCTNAGG	1 cut(s)	2813
EcoICRI	GAGCTC	1 cut(s)	1663
EcoRII	CCWGG	4 cut(s)	677, 1291, 1749, 2558
EcoT14I	CCWWGG	2 cut(s)	82, 1208
EcoT22I	ATGCAT	3 cut(s)	853, 1417, 2425
EcoT38I	GRGCYC	2 cut(s)	1665, 2548
ErhI	CCWWGG	2 cut(s)	82, 1208
FalI	AAGNNNNNCTT	7 cut(s)	31, 573, 605, 681, 713, 746, 778
FaqI	GGGAC	1 cut(s)	1323
FauI	CCCGC	2 cut(s)	789, 1487
FblI	GTMKAC	1 cut(s)	1329
Fnu4HI	GCNGC	9 cut(s)	291, 409, 531, 825, 1482, 2087, 2325, 2451, 2454
FokI	GGATG	9 cut(s)	1289, 1424, 1655, 1865, 1970, 2162, 2314, 2393, 2480
FriOI	GRGCYC	2 cut(s)	1665, 2548
Fsp4HI	GCNGC	9 cut(s)	291, 409, 531, 825, 1482, 2087, 2325, 2451, 2454
FspBI	CTAG	6 cut(s)	575, 1437, 1698, 2091, 2769, 2847
GluI	GCNGC	9 cut(s)	291, 409, 531, 825, 1482, 2087, 2325, 2451, 2454
HaeIII	GGCC	4 cut(s)	87, 1520, 2191, 2645
HapII	CCGG	3 cut(s)	513, 967, 1160
HincII	GTYRAC	2 cut(s)	325, 540
HindII	GTYRAC	2 cut(s)	325, 540
HindIII	AAGCTT	1 cut(s)	2859
HpaII	CCGG	3 cut(s)	513, 967, 1160
HphI	GGTGA	8 cut(s)	233, 614, 1004, 1037, 1568, 1907, 2047, 2381
Hpy166II	GTNNAC	9 cut(s)	179, 325, 540, 1045, 1151, 1330, 1577, 2172, 2432
Hpy8I	GTNNAC	9 cut(s)	179, 325, 540, 1045, 1151, 1330, 1577, 2172, 2432
HpyCH4III	ACNGT	6 cut(s)	1007, 1049, 1381, 2169, 2517, 2682
HpyCH4IV	ACGT	2 cut(s)	813, 2668
HpyF10VI	GCNNNNNNNGC	6 cut(s)	32, 478, 967, 2552, 2633, 2642
HpySE526I	ACGT	2 cut(s)	813, 2668
LguI	GCTCTTC	1 cut(s)	767
LmnI	GCTCC	3 cut(s)	832, 2356, 2624
Lsp1109I	GCAGC	7 cut(s)	277, 395, 517, 811, 2098, 2336, 2462
LweI	GCATC	6 cut(s)	13, 860, 1402, 2350, 2371, 2703
MaeI	CTAG	6 cut(s)	575, 1437, 1698, 2091, 2769, 2847
MaeII	ACGT	2 cut(s)	813, 2668
MaeIII	GTNAC	5 cut(s)	150, 159, 624, 842, 2764
MbiI	CCGCTC	2 cut(s)	1481, 2456
MflI	RGATCY	2 cut(s)	63, 1349
MhlI	GDGCHC	2 cut(s)	1665, 2548
MlsI	TGGCCA	1 cut(s)	2191
MluCI	AATT	8 cut(s)	315, 417, 1000, 1392, 1441, 1826, 1923, 2505
MluNI	TGGCCA	1 cut(s)	2191
MlyI	GAGTC	9 cut(s)	451, 470, 518, 535, 551, 1193, 1580, 2498, 2812
MmeI	TCCRAC	1 cut(s)	1218
Mox20I	TGGCCA	1 cut(s)	2191
Mph1103I	ATGCAT	3 cut(s)	853, 1417, 2425
MroXI	GAANNNNTTC	1 cut(s)	1569
MscI	TGGCCA	1 cut(s)	2191
MseI	TTAA	8 cut(s)	237, 399, 915, 1070, 1460, 1829, 1973, 2337
MslI	CAYNNNNRTG	2 cut(s)	1275, 2394
Msp20I	TGGCCA	1 cut(s)	2191
MspA1I	CMGCKG	2 cut(s)	961, 2608
MspCI	CTTAAG	1 cut(s)	398
MspI	CCGG	3 cut(s)	513, 967, 1160
MspR9I	CCNGG	4 cut(s)	679, 1293, 1751, 2560
Mva1269I	GAATGC	2 cut(s)	37, 1286
MvaI	CCWGG	4 cut(s)	679, 1293, 1751, 2560
MwoI	GCNNNNNNNGC	6 cut(s)	32, 478, 967, 2552, 2633, 2642
NcoI	CCATGG	1 cut(s)	82
NlaIV	GGNNCC	1 cut(s)	1528
NmuCI	GTSAC	1 cut(s)	842
NsiI	ATGCAT	3 cut(s)	853, 1417, 2425
NspI	RCATGY	4 cut(s)	1274, 1657, 1817, 2797
NspV	TTCGAA	1 cut(s)	1031
PaqCI	CACCTGC	1 cut(s)	1783
PciI	ACATGT	1 cut(s)	2793
PciSI	GCTCTTC	1 cut(s)	767
PcsI	WCGNNNNNNNCGW	1 cut(s)	2125
PctI	GAATGC	2 cut(s)	37, 1286
PdmI	GAANNNNTTC	1 cut(s)	1569
PfeI	GAWTC	7 cut(s)	674, 890, 1559, 1714, 1991, 2036, 2247
PflFI	GACNNNGTC	1 cut(s)	441
PflMI	CCANNNNNTGG	2 cut(s)	2242, 2377
PkrI	GCNGC	9 cut(s)	292, 410, 532, 826, 1483, 2088, 2326, 2452, 2455
PleI	GAGTC	9 cut(s)	450, 469, 517, 535, 551, 1192, 1580, 2497, 2812
PpsI	GAGTC	9 cut(s)	450, 469, 517, 535, 551, 1192, 1580, 2497, 2812
PscI	ACATGT	1 cut(s)	2793
PshAI	GACNNNNGTC	1 cut(s)	1335
PshBI	ATTAAT	1 cut(s)	1829
Psp124BI	GAGCTC	1 cut(s)	1665
Psp6I	CCWGG	4 cut(s)	677, 1291, 1749, 2558
PspGI	CCWGG	4 cut(s)	677, 1291, 1749, 2558
PspN4I	GGNNCC	1 cut(s)	1528
PspPI	GGNCC	1 cut(s)	515
PsrI	GAACNNNNNNTAC	2 cut(s)	1519, 1551
PstNI	CAGNNNCTG	2 cut(s)	2633, 2804
PsuI	RGATCY	2 cut(s)	63, 1349
PsyI	GACNNNGTC	1 cut(s)	441
PvuII	CAGCTG	2 cut(s)	961, 2608
RsaI	GTAC	5 cut(s)	1738, 2280, 2484, 2495, 2715
RsaNI	GTAC	5 cut(s)	1737, 2279, 2483, 2494, 2714
RseI	CAYNNNNRTG	2 cut(s)	1275, 2394
SacI	GAGCTC	1 cut(s)	1665
SapI	GCTCTTC	1 cut(s)	767
SaqAI	TTAA	8 cut(s)	237, 399, 915, 1070, 1460, 1829, 1973, 2337
SatI	GCNGC	9 cut(s)	291, 409, 531, 825, 1482, 2087, 2325, 2451, 2454
Sau96I	GGNCC	1 cut(s)	515
ScaI	AGTACT	2 cut(s)	1738, 2715
SchI	GAGTC	9 cut(s)	451, 470, 518, 535, 551, 1193, 1580, 2498, 2812
ScrFI	CCNGG	4 cut(s)	679, 1293, 1751, 2560
SduI	GDGCHC	2 cut(s)	1665, 2548
SfaNI	GCATC	6 cut(s)	13, 860, 1402, 2350, 2371, 2703
SfcI	CTRYAG	2 cut(s)	1904, 2165
SfuI	TTCGAA	1 cut(s)	1031
SinI	GGWCC	1 cut(s)	515
SmiMI	CAYNNNNRTG	2 cut(s)	1275, 2394
SmlI	CTYRAG	3 cut(s)	45, 115, 398
SmoI	CTYRAG	3 cut(s)	45, 115, 398
Sse9I	AATT	8 cut(s)	315, 417, 1000, 1392, 1441, 1826, 1923, 2505
SsiI	CCGC	7 cut(s)	458, 796, 1274, 1481, 1494, 1651, 2454
SspMI	CTAG	6 cut(s)	575, 1437, 1698, 2091, 2769, 2847
SstI	GAGCTC	1 cut(s)	1665
StyD4I	CCNGG	4 cut(s)	677, 1291, 1749, 2558
StyI	CCWWGG	2 cut(s)	82, 1208
TaaI	ACNGT	6 cut(s)	1007, 1049, 1381, 2169, 2517, 2682
TaiI	ACGT	2 cut(s)	816, 2671
TaqI	TCGA	6 cut(s)	132, 333, 1031, 1823, 1968, 2293
TasI	AATT	8 cut(s)	315, 417, 1000, 1392, 1441, 1826, 1923, 2505
TatI	WGTACW	4 cut(s)	1736, 2278, 2482, 2713
TauI	GCSGC	2 cut(s)	1484, 2456
TfiI	GAWTC	7 cut(s)	674, 890, 1559, 1714, 1991, 2036, 2247
Tru1I	TTAA	8 cut(s)	237, 399, 915, 1070, 1460, 1829, 1973, 2337
Tru9I	TTAA	8 cut(s)	237, 399, 915, 1070, 1460, 1829, 1973, 2337
TscAI	CASTG	4 cut(s)	847, 1869, 2351, 2522
TseFI	GTSAC	1 cut(s)	842
TseI	GCWGC	7 cut(s)	290, 408, 530, 824, 2086, 2324, 2450
Tsp45I	GTSAC	1 cut(s)	842
TspDTI	ATGAA	9 cut(s)	141, 536, 594, 620, 1482, 1847, 1869, 2028, 2484
TspGWI	ACGGA	1 cut(s)	894
TspRI	CASTG	4 cut(s)	847, 1869, 2351, 2522
Tth111I	GACNNNGTC	1 cut(s)	441
Van91I	CCANNNNNTGG	2 cut(s)	2242, 2377
Vha464I	CTTAAG	1 cut(s)	398
VpaK11BI	GGWCC	1 cut(s)	515
VspI	ATTAAT	1 cut(s)	1829
XapI	RAATTY	2 cut(s)	1392, 1441
XbaI	TCTAGA	3 cut(s)	1436, 1697, 2846
XceI	RCATGY	4 cut(s)	1274, 1657, 1817, 2797
XcmI	CCANNNNNNNNNTGG	2 cut(s)	2538, 2653
XmiI	GTMKAC	1 cut(s)	1329
XmnI	GAANNNNTTC	1 cut(s)	1569
XspI	CTAG	6 cut(s)	575, 1437, 1698, 2091, 2769, 2847
ZrmI	AGTACT	2 cut(s)	1738, 2715
Zsp2I	ATGCAT	3 cut(s)	853, 1417, 2425

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.