Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0004380

Physical Location & Seq

Genomic Coordinates Reverse (-)

59262275 .. 59267782

Gene Structure 5508 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG405000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2481 bp

ATGACAATGGAACGACTCCTACATTGTTGGGATTGGCCAGCTCCTTATCCAGGTGCGGAGTCTCTGTTGCAAATAGTGCATTGTGCCATTCCCCAAGTGTATTTTGAGTCCGGTCCTTCTCTTTCTGCTGCTGAGTTGACTCTTCATGTCCTTGACTCTCTTTACAAGAAACTAGATGAAGTATGCCTTGTCCGAGGTGGTGAGGACGAAGATTACCAGATGTTACTTCATTTATTTATTGGAACTATATTGCCATACATTGAGGGTCTTGATTCTTGGCTTTTTGAAGGAACACTTGATGATCCCTATGAGGAGATGTTCTTCTATCCCAATAGAGCAGTTTCAGTTGATAAGGCTGACTTCTGGGAGAAGAGCTATCTATTGAGGCAAGTGCGGGGTCAAATCTTAGACGTTGGGCGTGCTGCTCCATCTCTTGCCAGTGACCGTGCATCTGTAATAAATGACAAAAGGGGAGTGGGTCAGAGGGAATCCATCTCATGTCCGTTGTTTATTAAGGACATAGCTAAGTCGATCGTTTCTGCTGGAAAATCATTACAGCTGATCCGGCATATTCCTATGACTTCTTTAGGTGAAGGAAATTACTGTGCGATTGATGGTTTTGGCAGTTCGAATAAAGGTGTTCACCGTGGGGAGAGCATTGCAGGTTTAACTTTGTCAGAAGTTTTTTGCGTGTCATTAGCAGGTCTTGTAGGACATGGCGATCATATCTTTCAGTCTATTGCAAGTAAACAAAAACCGGAAAGTGATGATGGTGTGATTGAGTCAGTAAGAAGCTCAGAAAAACCTTGGTGTAAGTTCTTGGTTGATACGCTGTTGGAAAAAAGATTGATTGAAACCAACTCTCCACATGCGGATGGAAAAGCATTCCCTGGTGCGAAAGAAGAGAGTATGTTTTCAGATTTGGTAGACAAATGTCCCCTTTCAAGATCCTTCTGTCAAGAAAATCCAGTTACAACAGTCTGCCAAAAAATCCTTTCTAAGAATGGGGATGCATGGAAAACCTTGAACTTATCTAGAAATTTTAGCCTGCCCCCTTTAAATGATGAAGTTCTACGAGCGGCTATATTTGGCGGGGATAGTGGATCAACTTCTTCGGCCAAAGGAACCAACTATACATTTGGTTTTCGGTTTGGTGAATCTGAACATATTCGTTCACAAGACGACTCAAAAATGTTACAAATGTTGTTTCCTTTTCCCACTCTTCTTCCTTCTTTTGAGGATGATCTCCGCATGTCAGAGCTCTTACCTTTCCAGAAAAATAGCACCCTTCCATCTAGAGTTCTTACTTGGATTCAGTATTTTGAACCGAGAAGTACTCCACTTCCCGTGGTTATAGTGCAGGAATGTCTTACTGCCTACATTCAGAAGCAGGTGGATTGTATTGGCAGGCATGTATTGTCGAAATTGATGAATGATTGGAAGTTGATGGATGAACTGGCAGTGTTGCGTGCTATTTACTTGTTAGGGTCAGGTGATCTACTACAGCACTTCTTGACCATAATTTTCAATAAGCTGGATAAAGGAGAAACATGGGATGATGATTTCGAGTTAAACACTATATTGCAGGAATCTATAAGAAACTCTGCTGATGGTGTGCTACTAAGTGTTCCTGATTCATTGATTGTATCCCTCACCAAAAATCAAGATTTGAATGGCAATGAGCAGCCTAGCATGGCTTCCCTTCCCTCAACTCCTCGTAAAAGTCGTGCTAACAGCTTTGGAATGGATGGACTTGATCTACTACAGTTTACATACAAGGTCTCTTGGCCACTTGAACTTATTGCAAATGCAGAAGCGATCAAGAAATATAACCAAGTCATGGGATTCTTGCTCAAGGTCAAGCGAGCAAAGTTTGTACTGGATAAAGCTCGAAGATGGATGTGGAAGGGTAGAGGCAGGGCAGCGAACAGCTTTAAGCATCACTGGTTAGTGGAGCAGAAACTTCTCCATTTTGTGGATGCGTTTCACCAGTATGTGATGGACAGAGTGTATCACAATGCATGGCGTGAACTTTGTGAAGGTATGGCAGCCGCTCGTTCTCTGGATGAAGTCATTGAAGTACATGAGTCATACTTGTTGTCAATTCAGCGACAGTGCTTTGTAGTTCCAGATAAGCTGTGGGCTCTCATTGCAACCAGGATAAACAACATTTTGGGATTAGCATTGGACTTTTACTCTATACAGCTGACACTTAGTGGTGGAGCAGTTTCTGCAATCAAGGCCAAATGTGAAATGGAAGTTGAACGTATTGAGAAACAGTTTGATGATTGCATCGCTTTTCTGCTCAGAGTACTCTCCTTCAAACTCAATGTAGGACACTTCCCTCATTTAGCAGATTTGGTTACTAGGATCAACTACAACCACTTTTACATGTCAGATACTGGAAACCTAAGGACTCTCCCAAGCTCTGAAAATGTTGCTTCTAGACTGGGAAAAGCTTTTTTAGGTAGAACAGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005938 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009653 GO:0009893 GO:0009987 GO:0010562 GO:0010604 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0030587 GO:0031098 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0032502 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0048518 GO:0048522 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051703 GO:0051704 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071944 GO:0080090 GO:0090702 GO:0099120 GO:0099568 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Spc97_Spc98

Protein Analysis

826

Amino Acids

93.0

Weight (kDa)

5.89

Isoelectric Point (pI)

41.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GCP_N_terminal	PF17681	50 - 198	1.6e-12	Gamma tubulin complex component N-terminal
GCP_C_terminal	PF04130	482 - 797	1.5e-66	Gamma tubulin complex component C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004380)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20570 AT1G20570 AT1G20570 AT1G20570 AT1G80260 AT1G80260 AT1G80260
fragaria_vesca	FvH4_2g40750 FvH4_2g40750 FvH4_2g40750
malus_domestica	MD15G1036000.v1.1
prunus_persica	Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1
pyrus_communis	pycom15g03350
rosa_chinensis	RchiOBHm_Chr6g0299841
rosa_laevigata	RLG00000011384
rosa_multiflora	Rmu_ssc0000048.1_g000001
rosa_roxburghii	Rroxscaffold_7G00168330
rosa_rugosa	Rorug06G0292600
rosa_samantha	Rh6AG403800 Rh6BG412100 Rh6CG418200 Rh6DG405000
rosa_wichuraiana	Rw6G035330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1381
Acc36I	ACCTGC	3 cut(s)	653, 692, 1381
AccB7I	CCANNNNNTGG	2 cut(s)	1840, 1975
AccBSI	CCGCTC	2 cut(s)	1079, 2054
AccI	GTMKAC	1 cut(s)	927
AciI	CCGC	7 cut(s)	56, 394, 872, 1079, 1092, 1249, 2052
AclWI	GGATC	5 cut(s)	296, 556, 942, 1111, 2378
AcoI	YGGCCR	3 cut(s)	35, 1116, 1787
AcsI	RAATTY	1 cut(s)	1039
AdeI	CACNNNGTG	1 cut(s)	2216
AfaI	GTAC	4 cut(s)	1336, 1878, 2082, 2313
AfiI	CCNNNNNNNGG	3 cut(s)	50, 1840, 1975
AflIII	ACRYGT	1 cut(s)	2391
AjnI	CCWGG	3 cut(s)	49, 889, 2156
Alw21I	GWGCWC	1 cut(s)	1263
Alw26I	GTCTC	2 cut(s)	66, 1786
AlwI	GGATC	5 cut(s)	296, 556, 942, 1111, 2378
AlwNI	CAGNNNCTG	2 cut(s)	2231, 2402
AoxI	GGCC	4 cut(s)	35, 1116, 1787, 2241
ApeKI	GCWGC	5 cut(s)	128, 422, 1684, 1922, 2048
ApoI	RAATTY	1 cut(s)	1039
Asp700I	GAANNNNTTC	1 cut(s)	1167
AspS9I	GGNCC	1 cut(s)	113
AsuHPI	GGTGA	7 cut(s)	212, 602, 635, 1166, 1505, 1645, 1979
AsuII	TTCGAA	1 cut(s)	629
AvaII	GGWCC	1 cut(s)	113
AxyI	CCTNAGG	1 cut(s)	2411
BalI	TGGCCA	2 cut(s)	37, 1789
BanII	GRGCYC	2 cut(s)	1263, 2146
Bbv12I	GWGCWC	1 cut(s)	1263
BbvI	GCAGC	5 cut(s)	115, 409, 1696, 1934, 2060
BciT130I	CCWGG	3 cut(s)	51, 891, 2158
BciVI	GTATCC	1 cut(s)	1657
BcoDI	GTCTC	2 cut(s)	66, 1786
BfaI	CTAG	6 cut(s)	173, 1035, 1296, 1689, 2367, 2445
BfmI	CTRYAG	2 cut(s)	1502, 1763
BfuAI	ACCTGC	3 cut(s)	653, 692, 1381
BfuI	GTATCC	1 cut(s)	1657
BisI	GCNGC	7 cut(s)	129, 423, 1080, 1685, 1923, 2049, 2052
BlsI	GCNGC	7 cut(s)	130, 424, 1081, 1686, 1924, 2050, 2053
BmcAI	AGTACT	2 cut(s)	1336, 2313
Bme1390I	CCNGG	3 cut(s)	51, 891, 2158
Bme18I	GGWCC	1 cut(s)	113
BmgT120I	GGNCC	1 cut(s)	113
BmiI	GGNNCC	1 cut(s)	1126
BmrFI	CCNGG	3 cut(s)	51, 891, 2158
BmrI	ACTGGG	1 cut(s)	2459
BmsI	GCATC	5 cut(s)	458, 1000, 1948, 1969, 2301
BmuI	ACTGGG	1 cut(s)	2459
BoxI	GACNNNNGTC	1 cut(s)	933
BplI	GAGNNNNNCTC	2 cut(s)	1321, 1353
Bpu14I	TTCGAA	1 cut(s)	629
BpuEI	CTTGAG	1 cut(s)	1838
BsaI	GGTCTC	1 cut(s)	1786
BsaJI	CCNNGG	5 cut(s)	193, 646, 806, 889, 1347
BsaWI	WCCGGW	2 cut(s)	110, 757
BsaXI	ACNNNNNCTCC	4 cut(s)	50, 80, 847, 877
Bsc4I	CCNNNNNNNGG	3 cut(s)	50, 1840, 1975
Bse1I	ACTGG	8 cut(s)	438, 968, 1461, 1884, 1949, 1990, 2407, 2454
Bse21I	CCTNAGG	1 cut(s)	2411
Bse3DI	GCAATG	3 cut(s)	657, 1684, 2148
BseBI	CCWGG	3 cut(s)	51, 891, 2158
BseDI	CCNNGG	5 cut(s)	193, 646, 806, 889, 1347
BseGI	GGATG	9 cut(s)	880, 1015, 1246, 1456, 1561, 1753, 1905, 1984, 2071
BseLI	CCNNNNNNNGG	3 cut(s)	50, 1840, 1975
BseMI	GCAATG	3 cut(s)	657, 1684, 2148
BseMII	CTCAG	3 cut(s)	123, 810, 2320
BseNI	ACTGG	8 cut(s)	438, 968, 1461, 1884, 1949, 1990, 2407, 2454
BseRI	GAGGAG	2 cut(s)	326, 1704
BseXI	GCAGC	5 cut(s)	115, 409, 1696, 1934, 2060
BsgI	GTGCAG	1 cut(s)	1379
Bsh1285I	CGRYCG	1 cut(s)	534
BshFI	GGCC	4 cut(s)	37, 1118, 1789, 2243
BsiEI	CGRYCG	1 cut(s)	534
BsiHKAI	GWGCWC	1 cut(s)	1263
BsiSI	CCGG	3 cut(s)	111, 565, 758
BslFI	GGGAC	1 cut(s)	921
BslI	CCNNNNNNNGG	3 cut(s)	50, 1840, 1975
BsmAI	GTCTC	2 cut(s)	66, 1786
BsmFI	GGGAC	1 cut(s)	921
BsmI	GAATGC	1 cut(s)	884
BsnI	GGCC	4 cut(s)	37, 1118, 1789, 2243
Bso31I	GGTCTC	1 cut(s)	1786
Bsp119I	TTCGAA	1 cut(s)	629
Bsp1286I	GDGCHC	2 cut(s)	1263, 2146
BspACI	CCGC	7 cut(s)	56, 394, 872, 1079, 1092, 1249, 2052
BspANI	GGCC	4 cut(s)	37, 1118, 1789, 2243
BspCNI	CTCAG	3 cut(s)	124, 809, 2319
BspLI	GGNNCC	1 cut(s)	1126
BspMI	ACCTGC	3 cut(s)	653, 692, 1381
BspPI	GGATC	5 cut(s)	296, 556, 942, 1111, 2378
BspQI	GCTCTTC	1 cut(s)	365
BspT104I	TTCGAA	1 cut(s)	629
BspTNI	GGTCTC	1 cut(s)	1786
BsrBI	CCGCTC	2 cut(s)	1079, 2054
BsrDI	GCAATG	3 cut(s)	657, 1684, 2148
BsrI	ACTGG	8 cut(s)	438, 968, 1461, 1884, 1949, 1990, 2407, 2454
BssECI	CCNNGG	5 cut(s)	193, 646, 806, 889, 1347
BssT1I	CCWWGG	1 cut(s)	806
Bst2UI	CCWGG	3 cut(s)	51, 891, 2158
Bst4CI	ACNGT	7 cut(s)	446, 605, 647, 979, 1767, 2115, 2280
Bst6I	CTCTTC	4 cut(s)	147, 365, 897, 1227
BstAPI	GCANNNNNTGC	2 cut(s)	76, 2231
BstBI	TTCGAA	1 cut(s)	629
BstC8I	GCNNGC	6 cut(s)	39, 420, 1049, 1409, 1470, 1866
BstDEI	CTNAG	9 cut(s)	132, 406, 525, 796, 999, 1622, 2213, 2306, 2411
BstDSI	CCRYGG	2 cut(s)	646, 1347
BstENI	CCTNNNNNAGG	1 cut(s)	48
BstF5I	GGATG	9 cut(s)	880, 1015, 1246, 1456, 1561, 1753, 1905, 1984, 2071
BstMAI	GTCTC	2 cut(s)	66, 1786
BstMCI	CGRYCG	1 cut(s)	534
BstMWI	GCNNNNNNNGC	5 cut(s)	76, 565, 2150, 2231, 2240
BstNI	CCWGG	3 cut(s)	51, 891, 2158
BstNSI	RCATGY	4 cut(s)	872, 1255, 1415, 2395
BstPAI	GACNNNNGTC	1 cut(s)	933
BstSCI	CCNGG	3 cut(s)	49, 889, 2156
BstSFI	CTRYAG	2 cut(s)	1502, 1763
BstV1I	GCAGC	5 cut(s)	115, 409, 1696, 1934, 2060
BstX2I	RGATCY	1 cut(s)	947
BstYI	RGATCY	1 cut(s)	947
Bsu36I	CCTNAGG	1 cut(s)	2411
BsuI	GTATCC	1 cut(s)	1657
BsuRI	GGCC	4 cut(s)	37, 1118, 1789, 2243
BtgI	CCRYGG	2 cut(s)	646, 1347
BtgZI	GCGATG	1 cut(s)	2278
BtsCI	GGATG	9 cut(s)	880, 1015, 1246, 1456, 1561, 1753, 1905, 1984, 2071
BtsI	GCAGTG	1 cut(s)	1467
BtsIMutI	CAGTG	4 cut(s)	445, 1467, 1942, 2120
BveI	ACCTGC	3 cut(s)	653, 692, 1381
Cac8I	GCNNGC	6 cut(s)	39, 420, 1049, 1409, 1470, 1866
CaiI	CAGNNNCTG	2 cut(s)	2231, 2402
Cfr13I	GGNCC	1 cut(s)	113
Csp6I	GTAC	4 cut(s)	1335, 1877, 2081, 2312
CviQI	GTAC	4 cut(s)	1335, 1877, 2081, 2312
DdeI	CTNAG	9 cut(s)	132, 406, 525, 796, 999, 1622, 2213, 2306, 2411
DraI	TTTAAA	1 cut(s)	1059
DraIII	CACNNNGTG	1 cut(s)	2216
EaeI	YGGCCR	3 cut(s)	35, 1116, 1787
Eam1104I	CTCTTC	4 cut(s)	147, 365, 897, 1227
EarI	CTCTTC	4 cut(s)	147, 365, 897, 1227
Ecl136II	GAGCTC	1 cut(s)	1261
Eco130I	CCWWGG	1 cut(s)	806
Eco24I	GRGCYC	2 cut(s)	1263, 2146
Eco31I	GGTCTC	1 cut(s)	1786
Eco47I	GGWCC	1 cut(s)	113
Eco53kI	GAGCTC	1 cut(s)	1261
Eco81I	CCTNAGG	1 cut(s)	2411
EcoICRI	GAGCTC	1 cut(s)	1261
EcoNI	CCTNNNNNAGG	1 cut(s)	48
EcoRII	CCWGG	3 cut(s)	49, 889, 2156
EcoT14I	CCWWGG	1 cut(s)	806
EcoT22I	ATGCAT	2 cut(s)	1015, 2023
EcoT38I	GRGCYC	2 cut(s)	1263, 2146
ErhI	CCWWGG	1 cut(s)	806
FalI	AAGNNNNNCTT	6 cut(s)	171, 203, 279, 311, 344, 376
FaqI	GGGAC	1 cut(s)	921
FauI	CCCGC	2 cut(s)	387, 1085
FblI	GTMKAC	1 cut(s)	927
Fnu4HI	GCNGC	7 cut(s)	129, 423, 1080, 1685, 1923, 2049, 2052
FokI	GGATG	9 cut(s)	887, 1022, 1253, 1463, 1568, 1760, 1912, 1991, 2078
FriOI	GRGCYC	2 cut(s)	1263, 2146
Fsp4HI	GCNGC	7 cut(s)	129, 423, 1080, 1685, 1923, 2049, 2052
FspBI	CTAG	6 cut(s)	173, 1035, 1296, 1689, 2367, 2445
GluI	GCNGC	7 cut(s)	129, 423, 1080, 1685, 1923, 2049, 2052
HaeIII	GGCC	4 cut(s)	37, 1118, 1789, 2243
HapII	CCGG	3 cut(s)	111, 565, 758
HincII	GTYRAC	1 cut(s)	138
HindII	GTYRAC	1 cut(s)	138
HindIII	AAGCTT	1 cut(s)	2457
HpaII	CCGG	3 cut(s)	111, 565, 758
HphI	GGTGA	7 cut(s)	212, 602, 635, 1166, 1505, 1645, 1979
Hpy166II	GTNNAC	7 cut(s)	138, 643, 749, 928, 1175, 1770, 2030
Hpy8I	GTNNAC	7 cut(s)	138, 643, 749, 928, 1175, 1770, 2030
HpyCH4III	ACNGT	7 cut(s)	446, 605, 647, 979, 1767, 2115, 2280
HpyCH4IV	ACGT	2 cut(s)	411, 2266
HpyF10VI	GCNNNNNNNGC	5 cut(s)	76, 565, 2150, 2231, 2240
HpyF3I	CTNAG	9 cut(s)	132, 406, 525, 796, 999, 1622, 2213, 2306, 2411
HpySE526I	ACGT	2 cut(s)	411, 2266
LguI	GCTCTTC	1 cut(s)	365
LmnI	GCTCC	4 cut(s)	46, 430, 1954, 2222
Lsp1109I	GCAGC	5 cut(s)	115, 409, 1696, 1934, 2060
LweI	GCATC	5 cut(s)	458, 1000, 1948, 1969, 2301
MaeI	CTAG	6 cut(s)	173, 1035, 1296, 1689, 2367, 2445
MaeII	ACGT	2 cut(s)	411, 2266
MaeIII	GTNAC	5 cut(s)	222, 440, 970, 1194, 2362
MbiI	CCGCTC	2 cut(s)	1079, 2054
MboII	GAAGA	9 cut(s)	134, 221, 313, 382, 914, 1104, 1214, 1217, 1905
MflI	RGATCY	1 cut(s)	947
MhlI	GDGCHC	2 cut(s)	1263, 2146
MlsI	TGGCCA	2 cut(s)	37, 1789
MluCI	AATT	5 cut(s)	598, 1039, 1424, 1521, 2103
MluNI	TGGCCA	2 cut(s)	37, 1789
MlyI	GAGTC	9 cut(s)	9, 68, 116, 133, 149, 791, 1178, 2096, 2410
MmeI	TCCRAC	1 cut(s)	816
Mox20I	TGGCCA	2 cut(s)	37, 1789
Mph1103I	ATGCAT	2 cut(s)	1015, 2023
MroXI	GAANNNNTTC	1 cut(s)	1167
MscI	TGGCCA	2 cut(s)	37, 1789
MseI	TTAA	5 cut(s)	513, 668, 1058, 1571, 1935
MslI	CAYNNNNRTG	2 cut(s)	873, 1992
Msp20I	TGGCCA	2 cut(s)	37, 1789
MspA1I	CMGCKG	2 cut(s)	559, 2206
MspI	CCGG	3 cut(s)	111, 565, 758
MspR9I	CCNGG	3 cut(s)	51, 891, 2158
Mva1269I	GAATGC	1 cut(s)	884
MvaI	CCWGG	3 cut(s)	51, 891, 2158
MwoI	GCNNNNNNNGC	5 cut(s)	76, 565, 2150, 2231, 2240
NlaIV	GGNNCC	1 cut(s)	1126
NmuCI	GTSAC	1 cut(s)	440
NsiI	ATGCAT	2 cut(s)	1015, 2023
NspI	RCATGY	4 cut(s)	872, 1255, 1415, 2395
NspV	TTCGAA	1 cut(s)	629
PaqCI	CACCTGC	1 cut(s)	1381
PciI	ACATGT	1 cut(s)	2391
PciSI	GCTCTTC	1 cut(s)	365
PcsI	WCGNNNNNNNCGW	1 cut(s)	1723
PctI	GAATGC	1 cut(s)	884
PdmI	GAANNNNTTC	1 cut(s)	1167
PfeI	GAWTC	7 cut(s)	272, 488, 1157, 1312, 1589, 1634, 1845
PflMI	CCANNNNNTGG	2 cut(s)	1840, 1975
PkrI	GCNGC	7 cut(s)	130, 424, 1081, 1686, 1924, 2050, 2053
Ple19I	CGATCG	1 cut(s)	534
PleI	GAGTC	9 cut(s)	9, 67, 115, 133, 149, 790, 1178, 2095, 2410
PpsI	GAGTC	9 cut(s)	9, 67, 115, 133, 149, 790, 1178, 2095, 2410
PscI	ACATGT	1 cut(s)	2391
PshAI	GACNNNNGTC	1 cut(s)	933
Psp124BI	GAGCTC	1 cut(s)	1263
Psp6I	CCWGG	3 cut(s)	49, 889, 2156
PspGI	CCWGG	3 cut(s)	49, 889, 2156
PspN4I	GGNNCC	1 cut(s)	1126
PspPI	GGNCC	1 cut(s)	113
PsrI	GAACNNNNNNTAC	3 cut(s)	35, 1117, 1149
PstNI	CAGNNNCTG	2 cut(s)	2231, 2402
PsuI	RGATCY	1 cut(s)	947
PvuI	CGATCG	1 cut(s)	534
PvuII	CAGCTG	2 cut(s)	559, 2206
RsaI	GTAC	4 cut(s)	1336, 1878, 2082, 2313
RsaNI	GTAC	4 cut(s)	1335, 1877, 2081, 2312
RseI	CAYNNNNRTG	2 cut(s)	873, 1992
SacI	GAGCTC	1 cut(s)	1263
SapI	GCTCTTC	1 cut(s)	365
SaqAI	TTAA	5 cut(s)	513, 668, 1058, 1571, 1935
SatI	GCNGC	7 cut(s)	129, 423, 1080, 1685, 1923, 2049, 2052
Sau96I	GGNCC	1 cut(s)	113
ScaI	AGTACT	2 cut(s)	1336, 2313
SchI	GAGTC	9 cut(s)	9, 68, 116, 133, 149, 791, 1178, 2096, 2410
ScrFI	CCNGG	3 cut(s)	51, 891, 2158
SduI	GDGCHC	2 cut(s)	1263, 2146
SfaNI	GCATC	5 cut(s)	458, 1000, 1948, 1969, 2301
SfcI	CTRYAG	2 cut(s)	1502, 1763
SfuI	TTCGAA	1 cut(s)	629
SinI	GGWCC	1 cut(s)	113
SmiMI	CAYNNNNRTG	2 cut(s)	873, 1992
SmlI	CTYRAG	1 cut(s)	1853
SmoI	CTYRAG	1 cut(s)	1853
Sse9I	AATT	5 cut(s)	598, 1039, 1424, 1521, 2103
SsiI	CCGC	7 cut(s)	56, 394, 872, 1079, 1092, 1249, 2052
SspMI	CTAG	6 cut(s)	173, 1035, 1296, 1689, 2367, 2445
SstI	GAGCTC	1 cut(s)	1263
StyD4I	CCNGG	3 cut(s)	49, 889, 2156
StyI	CCWWGG	1 cut(s)	806
TaaI	ACNGT	7 cut(s)	446, 605, 647, 979, 1767, 2115, 2280
TaiI	ACGT	2 cut(s)	414, 2269
TaqI	TCGA	5 cut(s)	530, 629, 1421, 1566, 1891
TasI	AATT	5 cut(s)	598, 1039, 1424, 1521, 2103
TatI	WGTACW	4 cut(s)	1334, 1876, 2080, 2311
TauI	GCSGC	2 cut(s)	1082, 2054
TfiI	GAWTC	7 cut(s)	272, 488, 1157, 1312, 1589, 1634, 1845
Tru1I	TTAA	5 cut(s)	513, 668, 1058, 1571, 1935
Tru9I	TTAA	5 cut(s)	513, 668, 1058, 1571, 1935
TscAI	CASTG	4 cut(s)	445, 1467, 1949, 2120
TseFI	GTSAC	1 cut(s)	440
TseI	GCWGC	5 cut(s)	128, 422, 1684, 1922, 2048
Tsp45I	GTSAC	1 cut(s)	440
TspDTI	ATGAA	8 cut(s)	134, 192, 218, 1080, 1445, 1467, 1626, 2082
TspGWI	ACGGA	1 cut(s)	492
TspRI	CASTG	4 cut(s)	445, 1467, 1949, 2120
Van91I	CCANNNNNTGG	2 cut(s)	1840, 1975
VpaK11BI	GGWCC	1 cut(s)	113
XagI	CCTNNNNNAGG	1 cut(s)	48
XapI	RAATTY	1 cut(s)	1039
XbaI	TCTAGA	3 cut(s)	1034, 1295, 2444
XceI	RCATGY	4 cut(s)	872, 1255, 1415, 2395
XcmI	CCANNNNNNNNNTGG	2 cut(s)	2136, 2251
XmiI	GTMKAC	1 cut(s)	927
XmnI	GAANNNNTTC	1 cut(s)	1167
XspI	CTAG	6 cut(s)	173, 1035, 1296, 1689, 2367, 2445
ZrmI	AGTACT	2 cut(s)	1336, 2313
Zsp2I	ATGCAT	2 cut(s)	1015, 2023

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.