Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0004380

Physical Location & Seq

Genomic Coordinates Forward (+)

34804986 .. 34811503

Gene Structure 6518 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G389900.8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3003 bp

ATGGGGAAGCCTCTTTGCTATGATGCAGGAAATGCAGAAGTTTCTCAAGGTTTGATCAATAGGCTTTACAGTGACTTCTCCGATGGCATACATTTTGCGACACCAGTTTCTTCCTTGAGGACGAATGAACTTGACTTGGTTCGGAGTGTGTTGCAAATGTTGCAAGGATTTTCTAGCTCACTATTTTATTGGGACCAAAATAGAGTGTCTTTTCAAGTCAAAAGTGGGTTACATGTGAATCACCTCTCTCATACAAGTCTTCACGCCATTGTCCATCAATTTATGTATGCTGCAACATGCTTACAACTGGTGGAAGTTTTAGTCAATAAAATTGAGAAATCTGTTAAATTACCACCGCCTACTTTGAGGGCTTTTGCGTGTTCTGTTTCTTCATGGCTTACGAGGTTGCGCGATATTTCTTTAAAGGAGGAAATGAAGATAAGCAATGATGCCGTTGGAACAACTCCTACATTATTGGGGTTGGCCAATTCTTTATCTAGTCTTTGCTCAGGTGCTGAGTATTTGTTGCAAATAGTGCGTGGTGCCATCCCCCAAGTGTATTTTGAGTCTAATTCTTCTCTTCCTGCTGCTGACTTGGCTGTGCATGTCCTTGACCATATTTACAAGAAGCTGGATGAAGTGTGTCTTGTGCGAGGTGGTGAGGAGGAAGACTACAAGATGCTACTTCATTTATTTATTGGAAGTATATTGCCATATATTGAGGGTCTTGATTCTTGGCTTTTTGAAGGAACACTAGATGATCCATATGAGGAGATGTTCTTTTATGCTAATAGAGCAATATCTGTTGATGAGGCTGACTTTTGGGAGAAAAGCTATCTATTGAGGCAAATACAGTGTCAAATGTTAGATGTTGGGGCCTCTGCCTCATCTTGTGCCAGTGACCGCATATCAGTAGCAAATGATAAAAAGGGAGTGGGCCAAAGGGAATCCATCTCAACATTTAGTTTTATGAAAGGAAAGGAATGGAACGATAAAGACCTTCAGTCGTGTCCACTGTTTATTAAGGACATAGCTAAGTCTATTGTTTCTGCTGGAAAATCATTACAGCTGATCCGGCATATTCCCATGACATCAGCAGTTGTATCTAGAAAAGGAAATGACTGTGAGATTGATGGTTTTGGCAGTTTGGATAAAGGTGTTCAATATGGGCATAGCATTGCAGGCTTAACTTTGTCAGAAGTTTTCTGTGTGTCATTAGCGGGCCTTATAGGCCATGGTGATCATATTTTTCAATATATTTACGGTAAACAAAAAGTGGAGAGTGATGATGGTGTAATTGTGCCAGTAAAACGCTCAGAGAAAATTTGGTGTAAGTTCTTGGTTGATACGCTGGCAGAGAAAAGGTTGGTTGATACTCAGTCTGCACATGAGGATGGAAAAACACTTCCTGATGCAAAGGAAGAGAATATGCTTGCAGGTGTTGTAAATGAATTTCCTCTTTCAAGATCCTTCTGTCAAGAAAATCCGGTTTTAACAGTCTGCCAAAAGACCCTTTCTAAGAATGGGGATGCATGGAAAACGTTGAACTTATCTAGAAATTTATGTCTGCCTCCTTTAAATGATGAAATTTTGCGAAAGGCTATATTCGGTCGGGAGAGTGGATCGATTTCTGCAGATGAAGGAACAAATTATACTTTTGGTTTCCGGTTTGGTGAATCTGAATATCTTCGTTCACAAGACGACTCACATATGTTACAAGTGTTGTTTCCTTTTCCTACTCTTCTTCCTTCTTTTCAGGACGAGCTCCATATGTCAGAGCTCTTACCTTTCCAGAAAAATAGCACCCTTCCATCAAGAGTTCTTACCTGGGTTCAGCAGTTTGAACCAAGAAGTACTCCACTTCCGGTGGTTTTAGTGCAGGAATGTCTTACGGTGTACATCCAGAAGCGGGTGGATTGTATTGGCAGGCATATATTGTCAAAATTGATGAATGGTTGGAAATTGATGGATGAACTGGCAGTGCTGCGCGCCATTTACTTGCTAGGGTCAGGTGATCTGCTACAGCACTTCTTGACTGTAATTTTCAATAAGCTGGATAAGGGAGAAACATGGGATGATGATTTTGAGTTAAACACGATATTGCAGGAATCTATAAGGAACTCTGCTGATGGTGTGCTACTAAGTGTTCCTGATTCATTGATTGTATCCCTCACCAAAAATCATGACTTGAATGGCAATGAGCAACCACCTAATATGGCTTCACAACCCTCGACTCCTCGTAAAAGTCGTGCTCACAGCTTTGGAATGGATGGACTTGATCAGCTAAAATTTACGTATAAGGTCTCTTGGCCACTTGAACTTATTGCAAATGTGGAGGCGATCAAGAAATATAACCAGGTGATGGGATTCTTGTTAAAGGTCAAGCGAGCAAAATTCGTACTTGATAAAACTCGAAGGTGGATGTGGAAGGGTAGAGGCACTGCAGCAAACAATCACAAGCGTCACTGGTTAGTGGAGCAGAAACTTCTCCATTTTGTGGATGCTTTTCACCAGTATGTGATGGATAGAGTATATCACAATGCATGGCGTGAACTTTGTGAAGGCATGACAGCTGCTCGATCTCTTGACGAAGTCATAGAAGTACATGAATTGTACTTGTTGACAATTCAGCGGCAATGCTTTGTAGTTCCAGATAAGCTGTGGGCTCTCATAGCGAGCAGGATTAACAACATCCTGGGATTAGCATTGGACTTTTATTCTATACAGCTGACACTTAGTGGTGGAACAGTTTCTGCAATTAAGGCCAAATGTGAAATGGAAGTTGACCGTATTGAGAAACAGTTCGATGATTGCATTGCTTTCCTGCTCAGAGTGCTTTCTTTCAAGCTCAATGTGGGGCACTTTCCTCATCTAGCAGATTTGGTAACTAGGATAAACTACAATTACTTTTATATGTCAGATAGTGGAAACCTCAGGACTCTCCCCAGCTCTGAAAATGTTACTTCGAGACTGGGAAAGGCTTTTCTAGGCAGAACAGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005938 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009653 GO:0009893 GO:0009987 GO:0010562 GO:0010604 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023052 GO:0030587 GO:0031098 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0032502 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043412 GO:0043549 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0048518 GO:0048522 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051703 GO:0051704 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071944 GO:0080090 GO:0090702 GO:0099120 GO:0099568 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Spc97_Spc98

Protein Analysis

1001

Amino Acids

112.74

Weight (kDa)

6.14

Isoelectric Point (pI)

41.02

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004380)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20570 AT1G20570 AT1G20570 AT1G20570 AT1G80260 AT1G80260 AT1G80260
fragaria_vesca	FvH4_2g40750 FvH4_2g40750 FvH4_2g40750
malus_domestica	MD15G1036000.v1.1
prunus_persica	Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1 Prupe.1G389900_v2.0.a1
pyrus_communis	pycom15g03350
rosa_chinensis	RchiOBHm_Chr6g0299841
rosa_laevigata	RLG00000011384
rosa_multiflora	Rmu_ssc0000048.1_g000001
rosa_roxburghii	Rroxscaffold_7G00168330
rosa_rugosa	Rorug06G0292600
rosa_samantha	Rh6AG403800 Rh6BG412100 Rh6CG418200 Rh6DG405000
rosa_wichuraiana	Rw6G035330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1427
Acc36I	ACCTGC	1 cut(s)	1427
AccB1I	GGYRCC	1 cut(s)	542
AccB7I	CCANNNNNTGG	2 cut(s)	2362, 2497
AccII	CGCG	2 cut(s)	411, 1989
AciI	CCGC	5 cut(s)	356, 904, 1220, 1909, 2632
AclI	AACGTT	1 cut(s)	1541
AclWI	GGATC	4 cut(s)	755, 1066, 1461, 1630
AcoI	YGGCCR	2 cut(s)	483, 2309
AcsI	RAATTY	6 cut(s)	1323, 1451, 1558, 1587, 2288, 2393
AcuI	CTGAAG	1 cut(s)	986
AdeI	CACNNNGTG	1 cut(s)	2738
AfaI	GTAC	5 cut(s)	1855, 1898, 2400, 2604, 2615
AfiI	CCNNNNNNNGG	3 cut(s)	1909, 2362, 2497
AflIII	ACRYGT	1 cut(s)	232
AhdI	GACNNNNNGTC	1 cut(s)	1003
AjnI	CCWGG	3 cut(s)	1826, 2355, 2694
Alw21I	GWGCWC	3 cut(s)	1767, 1782, 2254
Alw26I	GTCTC	2 cut(s)	2308, 2962
AlwI	GGATC	4 cut(s)	755, 1066, 1461, 1630
AlwNI	CAGNNNCTG	2 cut(s)	515, 2753
AoxI	GGCC	7 cut(s)	483, 876, 937, 1222, 1231, 2309, 2763
ApeKI	GCWGC	5 cut(s)	290, 587, 1984, 2444, 2573
ApoI	RAATTY	6 cut(s)	1323, 1451, 1558, 1587, 2288, 2393
ArsI	GACNNNNNNTTYG	2 cut(s)	841, 873
Asp700I	GAANNNNTTC	3 cut(s)	1686, 2749, 2801
AspLEI	GCGC	3 cut(s)	411, 1989, 1991
AspS9I	GGNCC	4 cut(s)	193, 876, 937, 1222
AsuHPI	GGTGA	8 cut(s)	233, 671, 1250, 1685, 2024, 2164, 2371, 2501
AvaII	GGWCC	1 cut(s)	193
AxyI	CCTNAGG	1 cut(s)	2933
BaeGI	GKGCMC	1 cut(s)	2862
BalI	TGGCCA	2 cut(s)	485, 2311
BanI	GGYRCC	1 cut(s)	542
BanII	GRGCYC	3 cut(s)	1767, 1782, 2668
BbsI	GAAGAC	2 cut(s)	251, 675
Bbv12I	GWGCWC	3 cut(s)	1767, 1782, 2254
BbvI	GCAGC	5 cut(s)	277, 574, 1971, 2456, 2560
BceAI	ACGGC	1 cut(s)	437
BciT130I	CCWGG	3 cut(s)	1828, 2357, 2696
BciVI	GTATCC	1 cut(s)	2176
BclI	TGATCA	3 cut(s)	54, 1240, 2278
BcoDI	GTCTC	2 cut(s)	2308, 2962
BfaI	CTAG	9 cut(s)	174, 498, 755, 1107, 1554, 2003, 2873, 2889, 2987
BfmI	CTRYAG	3 cut(s)	1632, 2021, 2442
BfuAI	ACCTGC	1 cut(s)	1427
BfuI	GTATCC	1 cut(s)	2176
BglI	GCCNNNNNGGC	1 cut(s)	1230
BisI	GCNGC	6 cut(s)	291, 588, 1985, 2445, 2574, 2633
BlsI	GCNGC	6 cut(s)	292, 589, 1986, 2446, 2575, 2634
BmcAI	AGTACT	1 cut(s)	1855
Bme1390I	CCNGG	3 cut(s)	1828, 2357, 2696
Bme18I	GGWCC	1 cut(s)	193
BmeRI	GACNNNNNGTC	1 cut(s)	1003
BmgT120I	GGNCC	4 cut(s)	193, 876, 937, 1222
BmiI	GGNNCC	3 cut(s)	194, 544, 877
BmrFI	CCNGG	3 cut(s)	1828, 2357, 2696
BmrI	ACTGGG	1 cut(s)	2981
BmsI	GCATC	6 cut(s)	13, 439, 669, 1402, 1519, 2491
BmuI	ACTGGG	1 cut(s)	2981
BpiI	GAAGAC	2 cut(s)	251, 675
Bpu10I	CCTNAGC	1 cut(s)	508
BpuEI	CTTGAG	2 cut(s)	30, 136
Bsa29I	ATCGAT	1 cut(s)	1625
BsaAI	YACGTR	1 cut(s)	2295
BsaI	GGTCTC	1 cut(s)	2308
BsaJI	CCNNGG	3 cut(s)	1234, 1827, 2695
BsaWI	WCCGGW	3 cut(s)	1486, 1665, 1864
Bsc4I	CCNNNNNNNGG	3 cut(s)	1909, 2362, 2497
Bse1I	ACTGG	8 cut(s)	104, 312, 897, 1304, 1980, 2471, 2512, 2976
Bse21I	CCTNAGG	1 cut(s)	2933
Bse3DI	GCAATG	5 cut(s)	451, 1176, 2203, 2642, 2814
BseBI	CCWGG	3 cut(s)	1828, 2357, 2696
BseCI	ATCGAT	1 cut(s)	1625
BseDI	CCNNGG	3 cut(s)	1234, 1827, 2695
BseLI	CCNNNNNNNGG	3 cut(s)	1909, 2362, 2497
BseMI	GCAATG	5 cut(s)	451, 1176, 2203, 2642, 2814
BseMII	CTCAG	6 cut(s)	507, 522, 1329, 1391, 2842, 2947
BseNI	ACTGG	8 cut(s)	104, 312, 897, 1304, 1980, 2471, 2512, 2976
BsePI	GCGCGC	1 cut(s)	1987
BseRI	GAGGAG	3 cut(s)	677, 785, 2226
BseSI	GKGCMC	1 cut(s)	2862
BseXI	GCAGC	5 cut(s)	277, 574, 1971, 2456, 2560
BseYI	CCCAGC	1 cut(s)	2945
BsgI	GTGCAG	2 cut(s)	1368, 1898
Bsh1236I	CGCG	2 cut(s)	411, 1989
Bsh1285I	CGRYCG	1 cut(s)	1612
BshFI	GGCC	7 cut(s)	485, 878, 939, 1224, 1233, 2311, 2765
BshNI	GGYRCC	1 cut(s)	542
BshVI	ATCGAT	1 cut(s)	1625
BsiEI	CGRYCG	1 cut(s)	1612
BsiHKAI	GWGCWC	3 cut(s)	1767, 1782, 2254
BsiSI	CCGG	4 cut(s)	1075, 1487, 1666, 1865
BslFI	GGGAC	1 cut(s)	206
BslI	CCNNNNNNNGG	3 cut(s)	1909, 2362, 2497
BsmAI	GTCTC	2 cut(s)	2308, 2962
BsmFI	GGGAC	1 cut(s)	206
BsnI	GGCC	7 cut(s)	485, 878, 939, 1224, 1233, 2311, 2765
Bso31I	GGTCTC	1 cut(s)	2308
Bsp1286I	GDGCHC	5 cut(s)	1767, 1782, 2254, 2668, 2862
Bsp1407I	TGTACA	1 cut(s)	1896
Bsp19I	CCATGG	1 cut(s)	1234
BspACI	CCGC	5 cut(s)	356, 904, 1220, 1909, 2632
BspANI	GGCC	7 cut(s)	485, 878, 939, 1224, 1233, 2311, 2765
BspCNI	CTCAG	6 cut(s)	508, 521, 1328, 1390, 2841, 2946
BspDI	ATCGAT	1 cut(s)	1625
BspFNI	CGCG	2 cut(s)	411, 1989
BspHI	TCATGA	1 cut(s)	2182
BspLI	GGNNCC	3 cut(s)	194, 544, 877
BspMAI	CTGCAG	2 cut(s)	1636, 2446
BspMI	ACCTGC	1 cut(s)	1427
BspPI	GGATC	4 cut(s)	755, 1066, 1461, 1630
BspT107I	GGYRCC	1 cut(s)	542
BspTNI	GGTCTC	1 cut(s)	2308
BsrDI	GCAATG	5 cut(s)	451, 1176, 2203, 2642, 2814
BsrGI	TGTACA	1 cut(s)	1896
BsrI	ACTGG	8 cut(s)	104, 312, 897, 1304, 1980, 2471, 2512, 2976
BssECI	CCNNGG	3 cut(s)	1234, 1827, 2695
BssHII	GCGCGC	1 cut(s)	1987
BssT1I	CCWWGG	1 cut(s)	1234
Bst2UI	CCWGG	3 cut(s)	1828, 2357, 2696
Bst6I	CTCTTC	3 cut(s)	585, 1416, 1746
BstAPI	GCANNNNNTGC	3 cut(s)	32, 160, 535
BstAUI	TGTACA	1 cut(s)	1896
BstBAI	YACGTR	1 cut(s)	2295
BstC8I	GCNNGC	8 cut(s)	1183, 1222, 1353, 1434, 1928, 1989, 2388, 2677
BstDSI	CCRYGG	1 cut(s)	1234
BstFNI	CGCG	2 cut(s)	411, 1989
BstHHI	GCGC	3 cut(s)	411, 1989, 1991
BstMAI	GTCTC	2 cut(s)	2308, 2962
BstMCI	CGRYCG	1 cut(s)	1612
BstNI	CCWGG	3 cut(s)	1828, 2357, 2696
BstNSI	RCATGY	3 cut(s)	236, 300, 608
BstSCI	CCNGG	3 cut(s)	1826, 2355, 2694
BstSFI	CTRYAG	3 cut(s)	1632, 2021, 2442
BstSLI	GKGCMC	1 cut(s)	2862
BstSNI	TACGTA	1 cut(s)	2295
BstUI	CGCG	2 cut(s)	411, 1989
BstV1I	GCAGC	5 cut(s)	277, 574, 1971, 2456, 2560
BstV2I	GAAGAC	2 cut(s)	251, 675
BstX2I	RGATCY	1 cut(s)	1466
BstYI	RGATCY	1 cut(s)	1466
Bsu15I	ATCGAT	1 cut(s)	1625
Bsu36I	CCTNAGG	1 cut(s)	2933
BsuI	GTATCC	1 cut(s)	2176
BsuRI	GGCC	7 cut(s)	485, 878, 939, 1224, 1233, 2311, 2765
BsuTUI	ATCGAT	1 cut(s)	1625
BtgI	CCRYGG	1 cut(s)	1234
BtsI	GCAGTG	2 cut(s)	1986, 2439
BtsIMutI	CAGTG	7 cut(s)	76, 860, 904, 1013, 1986, 2439, 2464
BveI	ACCTGC	1 cut(s)	1427
Cac8I	GCNNGC	8 cut(s)	1183, 1222, 1353, 1434, 1928, 1989, 2388, 2677
CaiI	CAGNNNCTG	2 cut(s)	515, 2753
CciI	TCATGA	1 cut(s)	2182
CfoI	GCGC	3 cut(s)	411, 1989, 1991
Cfr13I	GGNCC	4 cut(s)	193, 876, 937, 1222
ClaI	ATCGAT	1 cut(s)	1625
CseI	GACGC	1 cut(s)	2450
CsiI	ACCWGGT	1 cut(s)	2355
Csp6I	GTAC	5 cut(s)	1854, 1897, 2399, 2603, 2614
CviQI	GTAC	5 cut(s)	1854, 1897, 2399, 2603, 2614
DraI	TTTAAA	2 cut(s)	423, 1578
DraIII	CACNNNGTG	1 cut(s)	2738
DriI	GACNNNNNGTC	1 cut(s)	1003
EaeI	YGGCCR	2 cut(s)	483, 2309
Eam1104I	CTCTTC	3 cut(s)	585, 1416, 1746
Eam1105I	GACNNNNNGTC	1 cut(s)	1003
EarI	CTCTTC	3 cut(s)	585, 1416, 1746
Ecl136II	GAGCTC	2 cut(s)	1765, 1780
Eco105I	TACGTA	1 cut(s)	2295
Eco130I	CCWWGG	1 cut(s)	1234
Eco24I	GRGCYC	3 cut(s)	1767, 1782, 2668
Eco31I	GGTCTC	1 cut(s)	2308
Eco47I	GGWCC	1 cut(s)	193
Eco53kI	GAGCTC	2 cut(s)	1765, 1780
Eco57I	CTGAAG	1 cut(s)	986
Eco81I	CCTNAGG	1 cut(s)	2933
EcoICRI	GAGCTC	2 cut(s)	1765, 1780
EcoO109I	RGGNCCY	1 cut(s)	876
EcoRII	CCWGG	3 cut(s)	1826, 2355, 2694
EcoT14I	CCWWGG	1 cut(s)	1234
EcoT22I	ATGCAT	2 cut(s)	1534, 2545
EcoT38I	GRGCYC	3 cut(s)	1767, 1782, 2668
ErhI	CCWWGG	1 cut(s)	1234
FalI	AAGNNNNNCTT	2 cut(s)	630, 662
FaqI	GGGAC	1 cut(s)	206
FauI	CCCGC	2 cut(s)	1213, 1902
FauNDI	CATATG	3 cut(s)	766, 1710, 1770
FbaI	TGATCA	3 cut(s)	54, 1240, 2278
Fnu4HI	GCNGC	6 cut(s)	291, 588, 1985, 2445, 2574, 2633
FriOI	GRGCYC	3 cut(s)	1767, 1782, 2668
Fsp4HI	GCNGC	6 cut(s)	291, 588, 1985, 2445, 2574, 2633
FspBI	CTAG	9 cut(s)	174, 498, 755, 1107, 1554, 2003, 2873, 2889, 2987
GlaI	GCGC	3 cut(s)	410, 1988, 1990
GluI	GCNGC	6 cut(s)	291, 588, 1985, 2445, 2574, 2633
GsaI	CCCAGC	1 cut(s)	2949
HaeIII	GGCC	7 cut(s)	485, 878, 939, 1224, 1233, 2311, 2765
HapII	CCGG	4 cut(s)	1075, 1487, 1666, 1865
HgaI	GACGC	1 cut(s)	2450
HhaI	GCGC	3 cut(s)	411, 1989, 1991
Hin6I	GCGC	3 cut(s)	409, 1987, 1989
HinP1I	GCGC	3 cut(s)	409, 1987, 1989
HincII	GTYRAC	2 cut(s)	2622, 2785
HindII	GTYRAC	2 cut(s)	2622, 2785
HpaII	CCGG	4 cut(s)	1075, 1487, 1666, 1865
HphI	GGTGA	8 cut(s)	233, 671, 1250, 1685, 2024, 2164, 2371, 2501
Hpy166II	GTNNAC	7 cut(s)	1013, 1268, 1694, 1897, 2552, 2622, 2785
Hpy188I	TCNGA	9 cut(s)	82, 144, 1198, 1318, 1681, 1777, 2831, 2920, 2953
Hpy8I	GTNNAC	7 cut(s)	1013, 1268, 1694, 1897, 2552, 2622, 2785
HpyAV	CCTTC	9 cut(s)	740, 1010, 1480, 1634, 1758, 1817, 2409, 2422, 2555
HpyCH4IV	ACGT	2 cut(s)	1541, 2294
HpySE526I	ACGT	2 cut(s)	1541, 2294
HspAI	GCGC	3 cut(s)	409, 1987, 1989
Ksp22I	TGATCA	3 cut(s)	54, 1240, 2278
LmnI	GCTCC	2 cut(s)	1770, 2476
Lsp1109I	GCAGC	5 cut(s)	277, 574, 1971, 2456, 2560
LweI	GCATC	6 cut(s)	13, 439, 669, 1402, 1519, 2491
MabI	ACCWGGT	1 cut(s)	2355
MaeI	CTAG	9 cut(s)	174, 498, 755, 1107, 1554, 2003, 2873, 2889, 2987
MaeII	ACGT	2 cut(s)	1541, 2294
MaeIII	GTNAC	7 cut(s)	71, 228, 899, 1713, 2462, 2884, 2959
MflI	RGATCY	1 cut(s)	1466
MhlI	GDGCHC	5 cut(s)	1767, 1782, 2254, 2668, 2862
MlsI	TGGCCA	2 cut(s)	485, 2311
MluNI	TGGCCA	2 cut(s)	485, 2311
MlyI	GAGTC	4 cut(s)	575, 1697, 2227, 2932
MmeI	TCCRAC	2 cut(s)	436, 1937
Mox20I	TGGCCA	2 cut(s)	485, 2311
Mph1103I	ATGCAT	2 cut(s)	1534, 2545
MroXI	GAANNNNTTC	3 cut(s)	1686, 2749, 2801
MscI	TGGCCA	2 cut(s)	485, 2311
MslI	CAYNNNNRTG	2 cut(s)	1392, 2514
Msp20I	TGGCCA	2 cut(s)	485, 2311
MspA1I	CMGCKG	4 cut(s)	1069, 2573, 2632, 2728
MspI	CCGG	4 cut(s)	1075, 1487, 1666, 1865
MspR9I	CCNGG	3 cut(s)	1828, 2357, 2696
MvaI	CCWGG	3 cut(s)	1828, 2357, 2696
MvnI	CGCG	2 cut(s)	411, 1989
NcoI	CCATGG	1 cut(s)	1234
NdeI	CATATG	3 cut(s)	766, 1710, 1770
NlaIV	GGNNCC	3 cut(s)	194, 544, 877
NmuCI	GTSAC	3 cut(s)	71, 899, 2462
NsiI	ATGCAT	2 cut(s)	1534, 2545
NspI	RCATGY	3 cut(s)	236, 300, 608
PagI	TCATGA	1 cut(s)	2182
PaqCI	CACCTGC	1 cut(s)	1427
PauI	GCGCGC	1 cut(s)	1987
PciI	ACATGT	1 cut(s)	232
PcsI	WCGNNNNNNNCGW	1 cut(s)	2245
PdmI	GAANNNNTTC	3 cut(s)	1686, 2749, 2801
PfeI	GAWTC	7 cut(s)	238, 731, 947, 1676, 2108, 2153, 2367
PflFI	GACNNNGTC	1 cut(s)	2591
PflMI	CCANNNNNTGG	2 cut(s)	2362, 2497
PkrI	GCNGC	6 cut(s)	292, 589, 1986, 2446, 2575, 2634
PleI	GAGTC	4 cut(s)	574, 1697, 2227, 2932
PpsI	GAGTC	4 cut(s)	574, 1697, 2227, 2932
Ppu21I	YACGTR	1 cut(s)	2295
PscI	ACATGT	1 cut(s)	232
Psp124BI	GAGCTC	2 cut(s)	1767, 1782
Psp1406I	AACGTT	1 cut(s)	1541
Psp6I	CCWGG	3 cut(s)	1826, 2355, 2694
PspFI	CCCAGC	1 cut(s)	2945
PspGI	CCWGG	3 cut(s)	1826, 2355, 2694
PspN4I	GGNNCC	3 cut(s)	194, 544, 877
PspPI	GGNCC	4 cut(s)	193, 876, 937, 1222
PsrI	GAACNNNNNNTAC	4 cut(s)	451, 483, 1636, 1668
PstI	CTGCAG	2 cut(s)	1636, 2446
PstNI	CAGNNNCTG	2 cut(s)	515, 2753
PsuI	RGATCY	1 cut(s)	1466
PsyI	GACNNNGTC	1 cut(s)	2591
PteI	GCGCGC	1 cut(s)	1987
PvuII	CAGCTG	3 cut(s)	1069, 2573, 2728
RsaI	GTAC	5 cut(s)	1855, 1898, 2400, 2604, 2615
RsaNI	GTAC	5 cut(s)	1854, 1897, 2399, 2603, 2614
RseI	CAYNNNNRTG	2 cut(s)	1392, 2514
SacI	GAGCTC	2 cut(s)	1767, 1782
SatI	GCNGC	6 cut(s)	291, 588, 1985, 2445, 2574, 2633
Sau96I	GGNCC	4 cut(s)	193, 876, 937, 1222
ScaI	AGTACT	1 cut(s)	1855
SchI	GAGTC	4 cut(s)	575, 1697, 2227, 2932
ScrFI	CCNGG	3 cut(s)	1828, 2357, 2696
SduI	GDGCHC	5 cut(s)	1767, 1782, 2254, 2668, 2862
SexAI	ACCWGGT	1 cut(s)	2355
SfaNI	GCATC	6 cut(s)	13, 439, 669, 1402, 1519, 2491
SfcI	CTRYAG	3 cut(s)	1632, 2021, 2442
SfiI	GGCCNNNNNGGCC	1 cut(s)	1230
SinI	GGWCC	1 cut(s)	193
SmiMI	CAYNNNNRTG	2 cut(s)	1392, 2514
SmlI	CTYRAG	2 cut(s)	45, 115
SmoI	CTYRAG	2 cut(s)	45, 115
SnaBI	TACGTA	1 cut(s)	2295
SsiI	CCGC	5 cut(s)	356, 904, 1220, 1909, 2632
SspMI	CTAG	9 cut(s)	174, 498, 755, 1107, 1554, 2003, 2873, 2889, 2987
SstI	GAGCTC	2 cut(s)	1767, 1782
StyD4I	CCNGG	3 cut(s)	1826, 2355, 2694
StyI	CCWWGG	1 cut(s)	1234
TaiI	ACGT	2 cut(s)	1544, 2297
TaqI	TCGA	6 cut(s)	1625, 2231, 2413, 2578, 2805, 2966
TaqII	GACCGA	1 cut(s)	1598
TatI	WGTACW	4 cut(s)	1853, 1896, 2602, 2613
TauI	GCSGC	1 cut(s)	2635
TfiI	GAWTC	7 cut(s)	238, 731, 947, 1676, 2108, 2153, 2367
TscAI	CASTG	7 cut(s)	76, 860, 904, 1020, 1986, 2446, 2471
TseFI	GTSAC	3 cut(s)	71, 899, 2462
TseI	GCWGC	5 cut(s)	290, 587, 1984, 2444, 2573
Tsp45I	GTSAC	3 cut(s)	71, 899, 2462
TspRI	CASTG	7 cut(s)	76, 860, 904, 1020, 1986, 2446, 2471
Tth111I	GACNNNGTC	1 cut(s)	2591
Van91I	CCANNNNNTGG	2 cut(s)	2362, 2497
VpaK11BI	GGWCC	1 cut(s)	193
XapI	RAATTY	6 cut(s)	1323, 1451, 1558, 1587, 2288, 2393
XbaI	TCTAGA	2 cut(s)	1106, 1553
XceI	RCATGY	3 cut(s)	236, 300, 608
XcmI	CCANNNNNNNNNTGG	2 cut(s)	2658, 2773
XmnI	GAANNNNTTC	3 cut(s)	1686, 2749, 2801
XspI	CTAG	9 cut(s)	174, 498, 755, 1107, 1554, 2003, 2873, 2889, 2987
ZrmI	AGTACT	1 cut(s)	1855
Zsp2I	ATGCAT	2 cut(s)	1534, 2545

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.