Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005436

Physical Location & Seq

Genomic Coordinates Reverse (-)

193164 .. 199280

Gene Structure 6117 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G01440.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2922 bp

ATGGCGGCAGTGACTCTATCACCCTGTAGCATGTGTTGTGGTAGTAGAAGATTGCGTAGTGTCATTGTAATCCAAGCTCAGAGAGGAAACTGGAACAGAATCAGGTTGAGTAATTTCTTCTTCTCCAAAGTCTGGAACATATCTTATCGTTCAAAGCATAAATATTCTGACAATCTTCTTGAGCAAGTTGAGAAGTATGCCTCTGCTCGGCTCGAGAATCAGTCCAAGTTGATTACTAAGGTTGCAGCTTTGATGGAGTGTGATAATGTTGATGATTTTATTGATAAGAAATCTGATGAACAAGTTAAGAAAGATCTTGTTTTGGCGTGTAAGAGATTCCCTTCTATCATTCTTGGTGATTCTCGTCCCGTGGAATTATACTCCAATAGCAAATCTTACGGTGAATCAAGTAGCATTCTTAAAACGCCAACTGATAACAGTTTCCTTCCTACTCCTATGCATGGAGGATGGTTTGATCCGGATAATCTTTCGAGAACATTATCTTCCTTCTGTCCTGAGCTTTTACAGAATGATGATTCTTCTGATCCAAGAGAAGATATATTAGATGATGGTTCTTCTTTTACGAGCAAAACTGCTACTTCTGAAGTTGAAGCAACGTCTGATGATGTTTTTGCCGCTCAGCGATTTCTTGCTACTAGTATAGATTCTATGCCTGGGTTAAGTAAGAGGCACAGTAATCAGCTAGACAGCTGTGGTTTTCACACGATGAAGAAATTATTGCATCATTTTCCTCGAACCTATGCAGATTTGCAGAATGCACAGGTTGATATTGAGGATGGACAGTATTTGATATTTGTTGGGAAAGTCTTGTCTTCAAAGGGAGTTAGAGCTAGCTCTTCATTTTCATTTCTCGAGGTTATTGTCAGCTGTGAAGTCTCAGGCAGAGACAGAACTCCGGAGGATCTGAGTCATAATGCTGAAGATAAAGCAGGAAAATCAATATTTTTGCATCTGAAGAAGTTTTTTAGGGGGACTCGCTTCACCTGGCAACCCTTTCTTAATTCTATTCAAGAGAAACATAAAGTCGGGGACCTTGTATGCATTAGTGGGAAGGTAAAGTCATTGCGTGCAGAAGATCATTTTGAAATGAGGGAATACAATATAGATGTACTCAAAGATGAAGAAGAATCATCTCATCGAGCCCAGGGGAGACCATATCCTATATATCCTTCAAAAGGAGGGTTGAACCCAAAGTTCCTTAGCGATGTCATCTCCAGGGCTCTGCGGGTTCTCCCCGCCAATATGGATCCGATTCCTAAGGAAATTACTAAAGTGTTTGGCCTACCATCTCTTAATGATGCCTACGTTGGCATTCACGAGCCCAAGACTTTAGATGAGGCTGATTTAGCTCGCAAAAGGCTAATATTTGACGAATTCTTTTACCTACAGTTGGCACGCTTGTACCAAATGCTTCAAAGCCTTGGCACAAAAATAGAGAAAGATGTATTGCTGGAAAAGTTTAGAAAGCCAGTACTTAATTCCGTTTATATTGAAGAATGGTCCACTCTCACGAAGAGTTTTCTGAAAGCTCTACCATATTCCCTTACTCCTAGCCAGCTAAGCGCTGTCTCAGAAATAATATGGGATCTAAAGCGTCCGGTTCCAATGAATCGGCTTTTGCAGGGTGATGTTGGATGTGGCAAAACAGTGGTTGCTTTCTTAGCGTGTATGGAGGTCATAGGATCTGGTTACCAGGCAGCTTTCATGGCCCCCACAGAATTACTTGCCATCCAGCATTATGAACAGTGTCGTGATCTGTTGGAGAATATGGAAGGGGTAAGCTCCAAGCCAACCATTGGGTTGCTCACAGGTTCAACCCCGGCAAAGCAGTCACGTATGATTCGCCAGGATCTTCAAAGTGGAGCTATATCGTTTATAATTGGAACTCACAGTCTGATAGCTGAAAAGATAGAGTACTCTGCATTACGTATTGCCGTAGTTGATGAGCAGCAACGGTTTGGTGTAATCCAGAGAGGAAAGTTTAACAGCAAGTTATATGGAACATCTATGATATCAAAAAGTGGCTCATCTGACTCTGATGATACTTCTAAAGCTGATCTCAGTATGGCTCCTCATGTTCTTGCCATGTCAGCCACCCCTATCCCGAGATCACTTGCCTTAGCGTTATACGGAGATATATCTTTGACCCAAATTACTGGTATGCCACTTGGAAGAATACCAGTTGAGACGCACATTTTTGAAGGAAATGAGACTGGCATCAAAGAAGTCTACTCAATGATGCTGGAAGACCTGAAGTCTGGAGGCAGAGTATACGTTGTGTATCCTGTTATTGACCAATCAGAGCAACTGCCACAGCTCCGTGCTGCCTCTGCTGAGCTCGAAATAGTAACCAAAAAATTTCCAAAGTACAATTGCGGACTGTTACACGGGAGGATGAAGAGTGACGACAAAGAAGAGGCTCTAAACAAATTCAGAAGTGGAGAAACACAGATACTTCTGTCCACCCAGGTGATAGAGATAGGTGTTGATGTTCCAGACGCATCAATGATGGTTGTAATGAATGCTGAAAGATTTGGAATCGCTCAGTTACACCAACTCCGAGGACGTGTTGGGCGAGGAACCAGAAAATCCAAGTGCTTATTAGTTGGGTCAAGTACCAATAGCCTAAAACGGTTGAACATGTTGGGGAAATCATCAGATGGGTTTTACTTGGCAAACATAGACCTTCTTCTACGTGGACCTGGTGATTTGCTTGGGAAGAAACAGTCTGGGCACTTGCCAGAGTTCCCGGTCGCTAGGCTAGAAATAGACGGCAATATGTTGCAGGAAGCCCACATCGCCGCTTTGAACGTTCTAGGAGATTCTCATGACCTGGAGAAGTTTCCAGCGCTGAAAGCTGAGCTTAGCATGAGACAGCCACTTTGTCTTCTGGGCGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000002 GO:0000266 GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005739 GO:0006139 GO:0006259 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007005 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009507 GO:0009536 GO:0009987 GO:0010501 GO:0016043 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0033554 GO:0033955 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048285 GO:0050896 GO:0051716 GO:0070013 GO:0070035 GO:0071704 GO:0071840 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03440 map03440

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

973

Amino Acids

108.37

Weight (kDa)

7.06

Isoelectric Point (pI)

44.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	524 - 710	2.5e-16	DEAD/DEAH box helicase
Helicase_C	PF00271	755 - 866	9.7e-20	Helicase conserved C-terminal domain
RecG_dom3_C	PF19833	893 - 950	1.4e-08	ATP-dependent DNA helicase RecG, domain 3, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005436)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G01440
fragaria_vesca	FvH4_4g32470 FvH4_4g32470
malus_domestica	MD13G1025100.v1.1 MD16G1027600.v1.1 MD16G1027700.v1.1
prunus_persica	Prupe.1G325100_v2.0.a1 Prupe.1G325100_v2.0.a1 Prupe.1G325100_v2.0.a1 Prupe.1G325100_v2.0.a1 Prupe.1G325100_v2.0.a1 Prupe.1G325100_v2.0.a1 Prupe.1G325100_v2.0.a1 Prupe.1G325100_v2.0.a1 Prupe.1G325100_v2.0.a1 Prupe.1G325100_v2.0.a1 Prupe.1G325100_v2.0.a1
pyrus_communis	pycom13g02340 pycom16g02340
rosa_chinensis	RchiOBHm_Chr4g0441331
rosa_laevigata	RLG00000006101
rosa_multiflora	Rmu_co8457807.1_g000001
rosa_roxburghii	Rroxscaffold_5G00382220
rosa_rugosa	Rorug04G0332400
rosa_samantha	Rh4AG384400 Rh4BG398500 Rh4CG413600 Rh4DG391100
rosa_wichuraiana	Rw4G033180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1898
AccB7I	CCANNNNNTGG	2 cut(s)	132, 1817
AccBSI	CCGCTC	1 cut(s)	638
AccI	GTMKAC	2 cut(s)	2250, 2292
AccIII	TCCGGA	2 cut(s)	478, 916
AciI	CCGC	6 cut(s)	5, 636, 1246, 1257, 2397, 2823
AclI	AACGTT	1 cut(s)	2832
AclWI	GGATC	8 cut(s)	470, 539, 930, 1262, 1275, 1614, 1711, 1878
AcsI	RAATTY	3 cut(s)	1394, 2378, 2450
AcuI	CTGAAG	4 cut(s)	624, 960, 995, 2294
AfaI	GTAC	6 cut(s)	1131, 1424, 1494, 1937, 2390, 2638
AfeI	AGCGCT	2 cut(s)	1585, 2871
AfiI	CCNNNNNNNGG	6 cut(s)	132, 207, 461, 1196, 1411, 1817
AflIII	ACRYGT	2 cut(s)	2587, 2661
AhdI	GACNNNNNGTC	1 cut(s)	2275
AhlI	ACTAGT	1 cut(s)	656
AjiI	CACGTC	1 cut(s)	2588
AjnI	CCWGG	9 cut(s)	673, 1004, 1164, 1235, 1713, 1866, 2487, 2722, 2853
AleI	CACNNNNGTG	1 cut(s)	2489
Alw21I	GWGCWC	1 cut(s)	2361
Alw26I	GTCTC	7 cut(s)	900, 901, 1165, 1594, 2201, 2225, 2887
AlwI	GGATC	8 cut(s)	470, 539, 930, 1262, 1275, 1614, 1711, 1878
Ama87I	CYCGRG	3 cut(s)	212, 872, 2125
Aor13HI	TCCGGA	2 cut(s)	478, 916
Aor51HI	AGCGCT	2 cut(s)	1585, 2871
AoxI	GGCC	2 cut(s)	1300, 1728
ApeKI	GCWGC	4 cut(s)	245, 1718, 1969, 2345
ApoI	RAATTY	3 cut(s)	1394, 2378, 2450
ArsI	GACNNNNNNTTYG	2 cut(s)	2886, 2918
AspLEI	GCGC	2 cut(s)	1586, 2872
AspS9I	GGNCC	4 cut(s)	1051, 1521, 1729, 2720
AsuC2I	CCSGG	2 cut(s)	1841, 2771
AsuHPI	GGTGA	7 cut(s)	12, 368, 413, 994, 1658, 2503, 2738
AsuNHI	GCTAGC	1 cut(s)	851
AvaI	CYCGRG	3 cut(s)	212, 872, 2125
AvaII	GGWCC	3 cut(s)	1051, 1521, 2720
AxyI	CCTNAGG	1 cut(s)	1278
BaeGI	GKGCMC	1 cut(s)	2757
BaeI	ACNNNNGTAYC	4 cut(s)	1406, 1439, 2465, 2498
BamHI	GGATCC	1 cut(s)	1267
BanII	GRGCYC	4 cut(s)	1165, 1243, 1344, 2361
BauI	CACGAG	1 cut(s)	1337
BbsI	GAAGAC	3 cut(s)	825, 2274, 2900
Bbv12I	GWGCWC	1 cut(s)	2361
BbvI	GCAGC	4 cut(s)	257, 1730, 1981, 2332
BccI	CCATC	8 cut(s)	247, 462, 563, 791, 1315, 1757, 2524, 2675
BceAI	ACGGC	2 cut(s)	1940, 2809
BciT130I	CCWGG	9 cut(s)	675, 1006, 1166, 1237, 1715, 1868, 2489, 2724, 2855
BciVI	GTATCC	1 cut(s)	2313
BcnI	CCSGG	2 cut(s)	1841, 2771
BcoDI	GTCTC	7 cut(s)	900, 901, 1165, 1594, 2201, 2225, 2887
BcuI	ACTAGT	1 cut(s)	656
BfaI	CTAG	7 cut(s)	657, 704, 852, 1572, 2778, 2783, 2837
BfmI	CTRYAG	2 cut(s)	25, 1406
BfoI	RGCGCY	2 cut(s)	1587, 2873
BfuI	GTATCC	1 cut(s)	2313
BglII	AGATCT	1 cut(s)	313
BisI	GCNGC	7 cut(s)	6, 246, 636, 1719, 1970, 2346, 2823
BlpI	GCTNAGC	5 cut(s)	639, 1580, 2355, 2880, 2885
BlsI	GCNGC	7 cut(s)	7, 247, 637, 1720, 1971, 2347, 2824
BmcAI	AGTACT	2 cut(s)	1494, 1937
Bme18I	GGWCC	3 cut(s)	1051, 1521, 2720
BmeRI	GACNNNNNGTC	1 cut(s)	2275
BmeT110I	CYCGRG	3 cut(s)	212, 872, 2125
BmgBI	CACGTC	1 cut(s)	2588
BmgT120I	GGNCC	4 cut(s)	1051, 1521, 1729, 2720
BmiI	GGNNCC	6 cut(s)	1052, 1269, 1623, 1731, 2091, 2602
BmsI	GCATC	6 cut(s)	751, 979, 1309, 2247, 2250, 2531
BmtI	GCTAGC	1 cut(s)	855
BpiI	GAAGAC	3 cut(s)	825, 2274, 2900
BpmI	CTGGAG	3 cut(s)	1219, 2301, 2876
Bpu10I	CCTNAGC	3 cut(s)	516, 1220, 2140
Bpu1102I	GCTNAGC	5 cut(s)	639, 1580, 2355, 2880, 2885
BpuEI	CTTGAG	1 cut(s)	200
BpuMI	CCSGG	2 cut(s)	1841, 2771
BsaAI	YACGTR	3 cut(s)	1856, 1949, 2717
BsaI	GGTCTC	1 cut(s)	1165
BsaJI	CCNNGG	9 cut(s)	369, 674, 1164, 1165, 1236, 1441, 1839, 2487, 2581
BsaWI	WCCGGW	3 cut(s)	478, 916, 1618
BsaXI	ACNNNNNCTCC	4 cut(s)	2274, 2304, 2562, 2592
Bsc4I	CCNNNNNNNGG	6 cut(s)	132, 207, 461, 1196, 1411, 1817
Bse1I	ACTGG	5 cut(s)	95, 1490, 2182, 2201, 2239
Bse21I	CCTNAGG	1 cut(s)	1278
Bse3DI	GCAATG	1 cut(s)	1082
BseAI	TCCGGA	2 cut(s)	478, 916
BseBI	CCWGG	9 cut(s)	675, 1006, 1166, 1237, 1715, 1868, 2489, 2724, 2855
BseDI	CCNNGG	9 cut(s)	369, 674, 1164, 1165, 1236, 1441, 1839, 2487, 2581
BseGI	GGATG	5 cut(s)	473, 802, 1661, 1749, 2421
BseLI	CCNNNNNNNGG	6 cut(s)	132, 207, 461, 1196, 1411, 1817
BseMI	GCAATG	1 cut(s)	1082
BseNI	ACTGG	5 cut(s)	95, 1490, 2182, 2201, 2239
BseRI	GAGGAG	1 cut(s)	2082
BseSI	GKGCMC	1 cut(s)	2757
BseXI	GCAGC	4 cut(s)	257, 1730, 1981, 2332
BsgI	GTGCAG	1 cut(s)	1110
Bsh1285I	CGRYCG	1 cut(s)	2775
BshFI	GGCC	2 cut(s)	1302, 1730
BsiEI	CGRYCG	1 cut(s)	2775
BsiHKAI	GWGCWC	1 cut(s)	2361
BsiHKCI	CYCGRG	3 cut(s)	212, 872, 2125
BsiSI	CCGG	5 cut(s)	479, 917, 1619, 1841, 2771
BslFI	GGGAC	3 cut(s)	351, 1006, 1064
BslI	CCNNNNNNNGG	6 cut(s)	132, 207, 461, 1196, 1411, 1817
BsmAI	GTCTC	7 cut(s)	900, 901, 1165, 1594, 2201, 2225, 2887
BsmBI	CGTCTC	1 cut(s)	2201
BsmFI	GGGAC	3 cut(s)	351, 1006, 1064
BsmI	GAATGC	4 cut(s)	414, 781, 1332, 2548
BsnI	GGCC	2 cut(s)	1302, 1730
Bso31I	GGTCTC	1 cut(s)	1165
BsoBI	CYCGRG	3 cut(s)	212, 872, 2125
Bsp1286I	GDGCHC	5 cut(s)	1165, 1243, 1344, 2361, 2757
Bsp13I	TCCGGA	2 cut(s)	478, 916
Bsp1720I	GCTNAGC	5 cut(s)	639, 1580, 2355, 2880, 2885
BspACI	CCGC	6 cut(s)	5, 636, 1246, 1257, 2397, 2823
BspANI	GGCC	2 cut(s)	1302, 1730
BspEI	TCCGGA	2 cut(s)	478, 916
BspHI	TCATGA	1 cut(s)	2848
BspLI	GGNNCC	6 cut(s)	1052, 1269, 1623, 1731, 2091, 2602
BspOI	GCTAGC	1 cut(s)	855
BspPI	GGATC	8 cut(s)	470, 539, 930, 1262, 1275, 1614, 1711, 1878
BspQI	GCTCTTC	1 cut(s)	862
BspTNI	GGTCTC	1 cut(s)	1165
BsrBI	CCGCTC	1 cut(s)	638
BsrDI	GCAATG	1 cut(s)	1082
BsrI	ACTGG	5 cut(s)	95, 1490, 2182, 2201, 2239
BssECI	CCNNGG	9 cut(s)	369, 674, 1164, 1165, 1236, 1441, 1839, 2487, 2581
BssNAI	GTATAC	1 cut(s)	2293
BssSI	CACGAG	1 cut(s)	1337
BssT1I	CCWWGG	1 cut(s)	1441
Bst1107I	GTATAC	1 cut(s)	2293
Bst2BI	CACGAG	1 cut(s)	1337
Bst2UI	CCWGG	9 cut(s)	675, 1006, 1166, 1237, 1715, 1868, 2489, 2724, 2855
Bst6I	CTCTTC	4 cut(s)	862, 1529, 2414, 2430
BstBAI	YACGTR	3 cut(s)	1856, 1949, 2717
BstC8I	GCNNGC	5 cut(s)	853, 1089, 1372, 1417, 1577
BstDSI	CCRYGG	1 cut(s)	369
BstEII	GGTNACC	1 cut(s)	1709
BstENI	CCTNNNNNAGG	1 cut(s)	1194
BstF5I	GGATG	5 cut(s)	473, 802, 1661, 1749, 2421
BstH2I	RGCGCY	2 cut(s)	1587, 2873
BstHHI	GCGC	2 cut(s)	1586, 2872
BstMAI	GTCTC	7 cut(s)	900, 901, 1165, 1594, 2201, 2225, 2887
BstMCI	CGRYCG	1 cut(s)	2775
BstMWI	GCNNNNNNNGC	8 cut(s)	1367, 1581, 1682, 1727, 2111, 2351, 2819, 2876
BstNI	CCWGG	9 cut(s)	675, 1006, 1166, 1237, 1715, 1868, 2489, 2724, 2855
BstNSI	RCATGY	2 cut(s)	34, 2665
BstPI	GGTNACC	1 cut(s)	1709
BstSFI	CTRYAG	2 cut(s)	25, 1406
BstSLI	GKGCMC	1 cut(s)	2757
BstSNI	TACGTA	1 cut(s)	1949
BstV1I	GCAGC	4 cut(s)	257, 1730, 1981, 2332
BstV2I	GAAGAC	3 cut(s)	825, 2274, 2900
BstX2I	RGATCY	6 cut(s)	313, 922, 1267, 1606, 1703, 1870
BstXI	CCANNNNNNTGG	1 cut(s)	2177
BstYI	RGATCY	6 cut(s)	313, 922, 1267, 1606, 1703, 1870
BstZ17I	GTATAC	1 cut(s)	2293
Bsu36I	CCTNAGG	1 cut(s)	1278
BsuI	GTATCC	1 cut(s)	2313
BsuRI	GGCC	2 cut(s)	1302, 1730
BtgI	CCRYGG	1 cut(s)	369
BtgZI	GCGATG	2 cut(s)	1239, 2803
BtrI	CACGTC	1 cut(s)	2588
BtsCI	GGATG	5 cut(s)	473, 802, 1661, 1749, 2421
BtsI	GCAGTG	1 cut(s)	15
BtsIMutI	CAGTG	3 cut(s)	15, 1674, 1772
Cac8I	GCNNGC	5 cut(s)	853, 1089, 1372, 1417, 1577
CciI	TCATGA	1 cut(s)	2848
CfoI	GCGC	2 cut(s)	1586, 2872
Cfr13I	GGNCC	4 cut(s)	1051, 1521, 1729, 2720
CseI	GACGC	3 cut(s)	1604, 2218, 2528
CsiI	ACCWGGT	1 cut(s)	2722
Csp6I	GTAC	6 cut(s)	1130, 1423, 1493, 1936, 2389, 2637
CviAII	CATG	8 cut(s)	31, 461, 1726, 2096, 2107, 2662, 2849, 2890
CviQI	GTAC	6 cut(s)	1130, 1423, 1493, 1936, 2389, 2637
DriI	GACNNNNNGTC	1 cut(s)	2275
Eam1104I	CTCTTC	4 cut(s)	862, 1529, 2414, 2430
Eam1105I	GACNNNNNGTC	1 cut(s)	2275
EarI	CTCTTC	4 cut(s)	862, 1529, 2414, 2430
Ecl136II	GAGCTC	1 cut(s)	2359
Eco105I	TACGTA	1 cut(s)	1949
Eco130I	CCWWGG	1 cut(s)	1441
Eco24I	GRGCYC	4 cut(s)	1165, 1243, 1344, 2361
Eco31I	GGTCTC	1 cut(s)	1165
Eco32I	GATATC	1 cut(s)	2034
Eco47I	GGWCC	3 cut(s)	1051, 1521, 2720
Eco47III	AGCGCT	2 cut(s)	1585, 2871
Eco53kI	GAGCTC	1 cut(s)	2359
Eco57I	CTGAAG	4 cut(s)	624, 960, 995, 2294
Eco81I	CCTNAGG	1 cut(s)	1278
Eco88I	CYCGRG	3 cut(s)	212, 872, 2125
Eco91I	GGTNACC	1 cut(s)	1709
EcoICRI	GAGCTC	1 cut(s)	2359
EcoNI	CCTNNNNNAGG	1 cut(s)	1194
EcoO109I	RGGNCCY	1 cut(s)	1051
EcoO65I	GGTNACC	1 cut(s)	1709
EcoRI	GAATTC	1 cut(s)	1394
EcoRII	CCWGG	9 cut(s)	673, 1004, 1164, 1235, 1713, 1866, 2487, 2722, 2853
EcoRV	GATATC	1 cut(s)	2034
EcoT14I	CCWWGG	1 cut(s)	1441
EcoT22I	ATGCAT	2 cut(s)	462, 1064
EcoT38I	GRGCYC	4 cut(s)	1165, 1243, 1344, 2361
ErhI	CCWWGG	1 cut(s)	1441
Esp3I	CGTCTC	1 cut(s)	2201
FaeI	CATG	8 cut(s)	34, 464, 1729, 2099, 2110, 2665, 2852, 2893
FalI	AAGNNNNNCTT	2 cut(s)	2868, 2900
FaqI	GGGAC	3 cut(s)	351, 1006, 1064
FatI	CATG	8 cut(s)	30, 460, 1725, 2095, 2106, 2661, 2848, 2889
FauI	CCCGC	2 cut(s)	1239, 1264
FblI	GTMKAC	2 cut(s)	2250, 2292
Fnu4HI	GCNGC	7 cut(s)	6, 246, 636, 1719, 1970, 2346, 2823
FokI	GGATG	5 cut(s)	480, 809, 1668, 1736, 2428
FriOI	GRGCYC	4 cut(s)	1165, 1243, 1344, 2361
Fsp4HI	GCNGC	7 cut(s)	6, 246, 636, 1719, 1970, 2346, 2823
FspBI	CTAG	7 cut(s)	657, 704, 852, 1572, 2778, 2783, 2837
GlaI	GCGC	2 cut(s)	1585, 2871
GluI	GCNGC	7 cut(s)	6, 246, 636, 1719, 1970, 2346, 2823
GsuI	CTGGAG	3 cut(s)	1219, 2301, 2876
HaeII	RGCGCY	2 cut(s)	1587, 2873
HaeIII	GGCC	2 cut(s)	1302, 1730
HapII	CCGG	5 cut(s)	479, 917, 1619, 1841, 2771
HgaI	GACGC	3 cut(s)	1604, 2218, 2528
HhaI	GCGC	2 cut(s)	1586, 2872
Hin1II	CATG	8 cut(s)	34, 464, 1729, 2099, 2110, 2665, 2852, 2893
Hin6I	GCGC	2 cut(s)	1584, 2870
HinP1I	GCGC	2 cut(s)	1584, 2870
HpaII	CCGG	5 cut(s)	479, 917, 1619, 1841, 2771
HphI	GGTGA	7 cut(s)	12, 368, 413, 994, 1658, 2503, 2738
Hpy166II	GTNNAC	5 cut(s)	1524, 2251, 2293, 2484, 2720
Hpy8I	GTNNAC	5 cut(s)	1524, 2251, 2293, 2484, 2720
HpyAV	CCTTC	8 cut(s)	351, 455, 517, 1066, 1200, 1787, 2216, 2717
HpyCH4IV	ACGT	8 cut(s)	617, 1326, 1855, 1948, 2295, 2587, 2716, 2832
HpyF10VI	GCNNNNNNNGC	8 cut(s)	1367, 1581, 1682, 1727, 2111, 2351, 2819, 2876
HpySE526I	ACGT	8 cut(s)	617, 1326, 1855, 1948, 2295, 2587, 2716, 2832
Hsp92II	CATG	8 cut(s)	34, 464, 1729, 2099, 2110, 2665, 2852, 2893
HspAI	GCGC	2 cut(s)	1584, 2870
Kpn2I	TCCGGA	2 cut(s)	478, 916
LguI	GCTCTTC	1 cut(s)	862
LmnI	GCTCC	4 cut(s)	1808, 1883, 2095, 2343
Lsp1109I	GCAGC	4 cut(s)	257, 1730, 1981, 2332
LweI	GCATC	6 cut(s)	751, 979, 1309, 2247, 2250, 2531
MabI	ACCWGGT	1 cut(s)	2722
MaeI	CTAG	7 cut(s)	657, 704, 852, 1572, 2778, 2783, 2837
MaeII	ACGT	8 cut(s)	617, 1326, 1855, 1948, 2295, 2587, 2716, 2832
MaeIII	GTNAC	7 cut(s)	10, 1709, 1851, 2368, 2403, 2423, 2568
MbiI	CCGCTC	1 cut(s)	638
MfeI	CAATTG	1 cut(s)	2392
MflI	RGATCY	6 cut(s)	313, 922, 1267, 1606, 1703, 1870
MhlI	GDGCHC	5 cut(s)	1165, 1243, 1344, 2361, 2757
MlyI	GAGTC	4 cut(s)	7, 937, 988, 2048
MmeI	TCCRAC	2 cut(s)	1633, 1761
Mph1103I	ATGCAT	2 cut(s)	462, 1064
MroI	TCCGGA	2 cut(s)	478, 916
MseI	TTAA	7 cut(s)	306, 420, 680, 1020, 1314, 1497, 2004
MslI	CAYNNNNRTG	1 cut(s)	2489
MspA1I	CMGCKG	2 cut(s)	711, 888
MspI	CCGG	5 cut(s)	479, 917, 1619, 1841, 2771
MunI	CAATTG	1 cut(s)	2392
Mva1269I	GAATGC	4 cut(s)	414, 781, 1332, 2548
MvaI	CCWGG	9 cut(s)	675, 1006, 1166, 1237, 1715, 1868, 2489, 2724, 2855
MwoI	GCNNNNNNNGC	8 cut(s)	1367, 1581, 1682, 1727, 2111, 2351, 2819, 2876
NciI	CCSGG	2 cut(s)	1841, 2771
NheI	GCTAGC	1 cut(s)	851
NlaIII	CATG	8 cut(s)	34, 464, 1729, 2099, 2110, 2665, 2852, 2893
NlaIV	GGNNCC	6 cut(s)	1052, 1269, 1623, 1731, 2091, 2602
NmeAIII	GCCGAG	1 cut(s)	187
NmuCI	GTSAC	3 cut(s)	10, 1851, 2423
NsiI	ATGCAT	2 cut(s)	462, 1064
NspI	RCATGY	2 cut(s)	34, 2665
OliI	CACNNNNGTG	1 cut(s)	2489
PaeR7I	CTCGAG	2 cut(s)	212, 872
PagI	TCATGA	1 cut(s)	2848
PasI	CCCWGGG	1 cut(s)	1165
PciI	ACATGT	1 cut(s)	2661
PciSI	GCTCTTC	1 cut(s)	862
PcsI	WCGNNNNNNNCGW	1 cut(s)	2593
PctI	GAATGC	4 cut(s)	414, 781, 1332, 2548
PflMI	CCANNNNNTGG	2 cut(s)	132, 1817
PkrI	GCNGC	7 cut(s)	7, 247, 637, 1720, 1971, 2347, 2824
PleI	GAGTC	4 cut(s)	7, 936, 988, 2048
PpsI	GAGTC	4 cut(s)	7, 936, 988, 2048
Ppu21I	YACGTR	3 cut(s)	1856, 1949, 2717
PpuMI	RGGWCCY	1 cut(s)	1051
PscI	ACATGT	1 cut(s)	2661
PsiI	TTATAA	1 cut(s)	1898
Psp124BI	GAGCTC	1 cut(s)	2361
Psp1406I	AACGTT	1 cut(s)	2832
Psp5II	RGGWCCY	1 cut(s)	1051
Psp6I	CCWGG	9 cut(s)	673, 1004, 1164, 1235, 1713, 1866, 2487, 2722, 2853
PspEI	GGTNACC	1 cut(s)	1709
PspGI	CCWGG	9 cut(s)	673, 1004, 1164, 1235, 1713, 1866, 2487, 2722, 2853
PspN4I	GGNNCC	6 cut(s)	1052, 1269, 1623, 1731, 2091, 2602
PspPI	GGNCC	4 cut(s)	1051, 1521, 1729, 2720
PspPPI	RGGWCCY	1 cut(s)	1051
PsuI	RGATCY	6 cut(s)	313, 922, 1267, 1606, 1703, 1870
PvuII	CAGCTG	2 cut(s)	711, 888
RsaI	GTAC	6 cut(s)	1131, 1424, 1494, 1937, 2390, 2638
RsaNI	GTAC	6 cut(s)	1130, 1423, 1493, 1936, 2389, 2637
RseI	CAYNNNNRTG	1 cut(s)	2489
SacI	GAGCTC	1 cut(s)	2361
SapI	GCTCTTC	1 cut(s)	862
SaqAI	TTAA	7 cut(s)	306, 420, 680, 1020, 1314, 1497, 2004
SatI	GCNGC	7 cut(s)	6, 246, 636, 1719, 1970, 2346, 2823
Sau96I	GGNCC	4 cut(s)	1051, 1521, 1729, 2720
ScaI	AGTACT	2 cut(s)	1494, 1937
SchI	GAGTC	4 cut(s)	7, 937, 988, 2048
SduI	GDGCHC	5 cut(s)	1165, 1243, 1344, 2361, 2757
SexAI	ACCWGGT	1 cut(s)	2722
SfaNI	GCATC	6 cut(s)	751, 979, 1309, 2247, 2250, 2531
SfcI	CTRYAG	2 cut(s)	25, 1406
Sfr274I	CTCGAG	2 cut(s)	212, 872
SinI	GGWCC	3 cut(s)	1051, 1521, 2720
SlaI	CTCGAG	2 cut(s)	212, 872
SmiMI	CAYNNNNRTG	1 cut(s)	2489
SmlI	CTYRAG	3 cut(s)	179, 212, 872
SmoI	CTYRAG	3 cut(s)	179, 212, 872
SnaBI	TACGTA	1 cut(s)	1949
SpeI	ACTAGT	1 cut(s)	656
SsiI	CCGC	6 cut(s)	5, 636, 1246, 1257, 2397, 2823
SspI	AATATT	3 cut(s)	164, 963, 1386
SspMI	CTAG	7 cut(s)	657, 704, 852, 1572, 2778, 2783, 2837
SstI	GAGCTC	1 cut(s)	2361
StyI	CCWWGG	1 cut(s)	1441
TaiI	ACGT	8 cut(s)	620, 1329, 1858, 1951, 2298, 2590, 2719, 2835
TaqI	TCGA	6 cut(s)	213, 491, 754, 873, 1159, 2361
TatI	WGTACW	4 cut(s)	1129, 1492, 1935, 2388
TauI	GCSGC	3 cut(s)	8, 638, 2825
Tru1I	TTAA	7 cut(s)	306, 420, 680, 1020, 1314, 1497, 2004
Tru9I	TTAA	7 cut(s)	306, 420, 680, 1020, 1314, 1497, 2004
TscAI	CASTG	3 cut(s)	15, 1674, 1772
TseFI	GTSAC	3 cut(s)	10, 1851, 2423
TseI	GCWGC	4 cut(s)	245, 1718, 1969, 2345
Tsp45I	GTSAC	3 cut(s)	10, 1851, 2423
TspGWI	ACGGA	3 cut(s)	1492, 2166, 2330
TspRI	CASTG	3 cut(s)	15, 1674, 1772
Van91I	CCANNNNNTGG	2 cut(s)	132, 1817
VpaK11BI	GGWCC	3 cut(s)	1051, 1521, 2720
XagI	CCTNNNNNAGG	1 cut(s)	1194
XapI	RAATTY	3 cut(s)	1394, 2378, 2450
XceI	RCATGY	2 cut(s)	34, 2665
XhoI	CTCGAG	2 cut(s)	212, 872
XmiI	GTMKAC	2 cut(s)	2250, 2292
XspI	CTAG	7 cut(s)	657, 704, 852, 1572, 2778, 2783, 2837
ZrmI	AGTACT	2 cut(s)	1494, 1937
Zsp2I	ATGCAT	2 cut(s)	462, 1064

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.