RLG00000006101

ATP-dependent DNA helicase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0005436
Physical Location & Seq
Forward (+)
4354644 .. 4365813
11170 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000006101

Sequence Viewer

Length: 2961 bp
ATGGCACTGGCAGTTTCAGCTGGCATGTGTTTCGGTGGAAATGGATTGAGAAGTGCAATAGCTTTTGAAGCTGAGAAGGGATATCAGAATGCATTGGGTAGCAAAATGAGGTTCAGTACTTTTCTCCTTTCCAAAGTATTGAAATTATGTTCTCGATCAAAGCATACTTTTGCTAAGAGTATTTTGGAGGAGGCAGATAGTTATGGCATAGCAAGCATCTCAGATCGGTCAAAGTTGCTGAACAAGGTATCTGTTTTGATGGGTTATGATGGTCTTCATGATTTAATTGAGAATGAAAGAGCTAAAAAGCATTATGGTATGAATTTTAAAGATGCAATGGATGATTTTGATGCCTCCTTTGTCTGCAAGAGATTTCCATCAATCATTTTGGGTGATTCCCCTCCGGTGGAATTGTATGATGGGACTGCTAATTTCTTTGAAAAAATGACACTTTTAACAACTCAAAGTCCTGAAGGATTTCCTTCTGGCTCTACGGTTGAAGAGCAGGAGGGAGATTATCTCTATGAAACAGGGGATTCTCTGTATCCTGCGTTTCCAAGTGAAGAAACTTCCTCGTTAACAGATGAGCAGTCCACGACTTTGGCTACTGAGAGATACTCATATCAACCAGTTCCTGTGGAGGAATCTTCTAACAAAGTTTCGCATAAATCACAAAAGAATGTGCCTGATGAGGTGTTCCTGGACAATTCTATCAGTTGTATACCTGGAATAAGTAAGAAGCGTCTCCGTCAGCTAGAAAATTGTGGGTTTCATACGGTGCGGAAATTGCTGCACCACTTTCCTCGGACCTATGCTGATTTACAGAATGCTCAAATTGACATAGATGATGGACAGTACTTGATTTTCATTGGAAAGATATTAAAATCAAGGGGAATCAAAGCTGGTACTTCTTTTTCAATTGTTGAGGTTGTCGTGGGTTGTGAAATTGCTGACGATAAAATAACCGAGCATAAGGATGCCGATTGTAGAAGGAAGACAATATATTTGCATCTGAAGAAATTTTTTCGTGGTACACGTTTTACTTCTCTACCATTTCTTAGAATAGTTGAGAAGAAGCACAGAGAGGGAGACTTTGTATGTGTTAGTGGTAAGGTGAGAATAATGCCTGCCAAAGATCACTATGAAATGAGAGAATATAATATTGATGTCCTTAAAGATGAAAATGACTTGTCTTTTCATGCAAAAGGGAGGCCATATCCTATATACCCTTCAAAAGGAGGCTTAAATCCTGACGTTTTGAGAGATATCATTGCAAGAGTTGTACAAGTTTTACCTATCAATATTGATCCTATTCCTAAAAGAATCACTCTGGAATTTGGGCTGCTCAGTCTTCATGATGCTTATACTGAGATTCACCAACCGAAGAGTATGAGTGAAGCTGATTTGGCTCGGAAGAGGCTAATATTTGATGAGTTCTTTTACCTTCAGCTAGCGCGCTTATACCAAATGCTTGAAGGGCTTGGTACACAAATAGAGAAAGATGGATTGCTAAATAAGTATAGGAAACCTGAATCAAGTGCTGCTTATATGGAAGACTGGTCCAGTCTTACCAAGAAGTTTCTAAAAGCTCTTCCATATGCCCTTACGGGTAGTCAGCTCACTGCTGTTTCAGAAATTATCTGGGATCTCAGGCAACCAGTTCCAATGAATCGGCTTTTGCAGGGTGATGTTGGCTGTGGTAAAACTGTAGTTGCTTTTCTAGCATGCATGGAGGTAATGGGCTCTGGATATCAGGCAGCTTTCATGGTTCCTACTGAGTTGCTTGCCGTCCAGCATTACGAGCACTTGAAGAATTTGCTTGAAACTATGGAGGATGTTGAGTGCAAACCTTCTATTGCCTTACTAACAGGATCAACCCCATCAAAACAATCACGGATGATTCAAAAGAGTCTCCAGACTGGAGAGATATCAATGGTCATTGGAACAACTAGTTTAATAGCTGACCGTGTGGAGTTCTCTGCATTACGGATTGCTGTGGTGGATGAACAACATCGTTTTGGTGTCATCCAGAGAGGACGGTTTAACAGTAAGCTATACTATACCTCCATAATATCTAACTTGCTAGCCACAAACTCAGATGGGACCTCCAAAGGTGAAAAGCATATGGCTCCTCATGTTCTTGCCATGTCAGCTACTCCAATCCCAAGGACGCTTGCTCTGGCTTTATATGGGGATATGTCATTAACACAAATAACAGACTTGCCACCAGGAAGAATACCAGTGGAGACATTCATTATTCAAGGAAATGAAAATGGGTATGAGGATGCATATGAGATGATGCTTGATGAGTTAAAAGAAGGAGGCAAAGTGTATCTAGTGTATCCAGTCATTGAACAATCTGAGCAGCTGCCTCAACTCCGTGCAGCTTCTGCGGATTTTGAAGCTATATCTCATAGGTTTCAGGGCTACAGCTGTGGATTGCTGCATGGGAAAATGAAGAGTGATGAGAAAGATGAGGCACTGAGAAAGTTTAGGTCTGGAGAAACAAATATACTTCTTGCCACACAAGTAATTGAGATTGGTGTTGATGTCCCAGATGCATCTATGATGGTTGTTATGAATGCTGAGAGGTTTGGCATTGCTCAGTTACATCAGCTTAGAGGACGAGTTGGACGAGGTGTGAGAAAGTCTAAGTGTATACTGTTAGCGTCTTCTGAGAGTAGCCTACCACGGCTGAAGGTCCTTGGGAAATCATCAGATGGGTTTTACTTGGCGAATATGGACCTTCTTTTACGTGGACCTGGTAACTTGCTTGGCAAGAAACAGTCGGGACATCTTCCAGAGTTTCCTATTGCAAGATTGGAAATAGATGGCAATATCTTACAAGAAGCACACCTTGCTGCTCTGAAAATTTTAGGTGATTCTCATGATTTGGAGCAATTCCCGCTGCTCAAAGCAGAGCTTAGCATGAGACAGCCTCTGTCTATTCTGGGTGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03440 map03440
Pfam Domains
Protein Families
DEAD Helicase_C

Protein Analysis

987

Amino Acids

110.06

Weight (kDa)

6.31

Isoelectric Point (pI)

44.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ResIII PF04851 538 - 720 3.3e-07 Type III restriction enzyme, res subunit
DEAD PF00270 557 - 724 3.5e-19 DEAD/DEAH box helicase
Helicase_C PF00271 766 - 879 9.6e-20 Helicase conserved C-terminal domain
RecG_dom3_C PF19833 906 - 962 4e-08 ATP-dependent DNA helicase RecG, domain 3, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 721, 2659
AccII CGCG 1 cut(s) 1456
AciI CCGC 3 cut(s) 781, 2393, 2906
AclWI GGATC 3 cut(s) 1301, 1653, 1879
AcsI RAATTY 5 cut(s) 322, 1019, 1334, 1813, 2871
AcuI CTGAAG 4 cut(s) 492, 1034, 1430, 2717
AfaI GTAC 6 cut(s) 118, 857, 907, 1033, 1284, 1486
AfiI CCNNNNNNNGG 2 cut(s) 406, 1235
AflIII ACRYGT 1 cut(s) 1034
AhlI ACTAGT 1 cut(s) 1949
AjnI CCWGG 4 cut(s) 699, 724, 2227, 2761
Alw21I GWGCWC 1 cut(s) 1806
Alw26I GTCTC 5 cut(s) 749, 1083, 1916, 2240, 2926
AlwI GGATC 3 cut(s) 1301, 1653, 1879
AlwNI CAGNNNCTG 3 cut(s) 635, 2390, 2941
AoxI GGCC 1 cut(s) 1211
ApoI RAATTY 5 cut(s) 322, 1019, 1334, 1813, 2871
ArsI GACNNNNNNTTYG 2 cut(s) 988, 1020
Asp700I GAANNNNTTC 1 cut(s) 477
AspLEI GCGC 2 cut(s) 1456, 1458
AspS9I GGNCC 6 cut(s) 807, 1560, 2103, 2701, 2743, 2759
AsuHPI GGTGA 6 cut(s) 404, 1126, 1367, 1697, 2126, 2891
AsuNHI GCTAGC 2 cut(s) 1450, 2083
AvaII GGWCC 6 cut(s) 807, 1560, 2103, 2701, 2743, 2759
BanII GRGCYC 1 cut(s) 1745
BbsI GAAGAC 5 cut(s) 266, 1001, 1343, 1560, 2664
Bbv12I GWGCWC 1 cut(s) 1806
BceAI ACGGC 2 cut(s) 1772, 2708
BcgI CGANNNNNNTGC 2 cut(s) 13, 47
BciT130I CCWGG 4 cut(s) 701, 726, 2229, 2763
BciVI GTATCC 2 cut(s) 555, 2352
BcoDI GTCTC 5 cut(s) 749, 1083, 1916, 2240, 2926
BcuI ACTAGT 1 cut(s) 1949
BfaI CTAG 6 cut(s) 755, 1451, 1721, 1950, 2084, 2336
BfmI CTRYAG 2 cut(s) 1707, 2428
BfuI GTATCC 2 cut(s) 555, 2352
BlpI GCTNAGC 1 cut(s) 2924
BmcAI AGTACT 2 cut(s) 118, 857
Bme1390I CCNGG 4 cut(s) 701, 726, 2229, 2763
Bme18I GGWCC 6 cut(s) 807, 1560, 2103, 2701, 2743, 2759
BmgT120I GGNCC 6 cut(s) 807, 1560, 2103, 2701, 2743, 2759
BmiI GGNNCC 3 cut(s) 1770, 2104, 2130
BmrFI CCNGG 4 cut(s) 701, 726, 2229, 2763
BmtI GCTAGC 2 cut(s) 1454, 2087
BpiI GAAGAC 5 cut(s) 266, 1001, 1343, 1560, 2664
BplI GAGNNNNNCTC 6 cut(s) 504, 536, 602, 634, 2923, 2955
BpmI CTGGAG 3 cut(s) 1898, 1941, 2520
Bpu1102I GCTNAGC 1 cut(s) 2924
BsaAI YACGTR 1 cut(s) 2756
BsaBI GATNNNNATC 1 cut(s) 376
BsaJI CCNNGG 4 cut(s) 803, 2165, 2690, 2704
BsaWI WCCGGW 1 cut(s) 403
BsaXI ACNNNNNCTCC 6 cut(s) 1080, 1110, 2048, 2078, 2313, 2343
Bsc4I CCNNNNNNNGG 2 cut(s) 406, 1235
Bse1I ACTGG 8 cut(s) 12, 629, 1562, 1563, 1658, 1924, 2240, 2345
Bse3DI GCAATG 3 cut(s) 342, 1269, 2598
Bse8I GATNNNNATC 1 cut(s) 376
BseBI CCWGG 4 cut(s) 701, 726, 2229, 2763
BseDI CCNNGG 4 cut(s) 803, 2165, 2690, 2704
BseGI GGATG 7 cut(s) 346, 982, 1840, 1902, 2008, 2025, 2290
BseJI GATNNNNATC 1 cut(s) 376
BseLI CCNNNNNNNGG 2 cut(s) 406, 1235
BseMI GCAATG 3 cut(s) 342, 1269, 2598
BseNI ACTGG 8 cut(s) 12, 629, 1562, 1563, 1658, 1924, 2240, 2345
BsePI GCGCGC 1 cut(s) 1454
BseRI GAGGAG 2 cut(s) 203, 2121
BsgI GTGCAG 2 cut(s) 776, 2403
Bsh1236I CGCG 1 cut(s) 1456
BshFI GGCC 1 cut(s) 1213
BsiHKAI GWGCWC 1 cut(s) 1806
BsiSI CCGG 1 cut(s) 404
BslFI GGGAC 4 cut(s) 436, 2116, 2537, 2805
BslI CCNNNNNNNGG 2 cut(s) 406, 1235
BsmAI GTCTC 5 cut(s) 749, 1083, 1916, 2240, 2926
BsmBI CGTCTC 1 cut(s) 749
BsmFI GGGAC 4 cut(s) 436, 2116, 2537, 2805
BsmI GAATGC 3 cut(s) 94, 832, 2587
BsnI GGCC 1 cut(s) 1213
Bsp1286I GDGCHC 2 cut(s) 1745, 1806
Bsp1407I TGTACA 1 cut(s) 1282
Bsp143I GATC 6 cut(s) 155, 223, 1135, 1306, 1645, 1871
Bsp1720I GCTNAGC 1 cut(s) 2924
BspACI CCGC 3 cut(s) 781, 2393, 2906
BspANI GGCC 1 cut(s) 1213
BspFNI CGCG 1 cut(s) 1456
BspHI TCATGA 3 cut(s) 277, 1354, 2887
BspLI GGNNCC 3 cut(s) 1770, 2104, 2130
BspOI GCTAGC 2 cut(s) 1454, 2087
BspPI GGATC 3 cut(s) 1301, 1653, 1879
BspQI GCTCTTC 2 cut(s) 495, 1596
BsrDI GCAATG 3 cut(s) 342, 1269, 2598
BsrGI TGTACA 1 cut(s) 1282
BsrI ACTGG 8 cut(s) 12, 629, 1562, 1563, 1658, 1924, 2240, 2345
BssECI CCNNGG 4 cut(s) 803, 2165, 2690, 2704
BssHII GCGCGC 1 cut(s) 1454
BssMI GATC 6 cut(s) 155, 223, 1135, 1306, 1645, 1871
BssNAI GTATAC 2 cut(s) 722, 2660
BssT1I CCWWGG 2 cut(s) 2165, 2704
Bst1107I GTATAC 2 cut(s) 722, 2660
Bst2UI CCWGG 4 cut(s) 701, 726, 2229, 2763
Bst4CI ACNGT 9 cut(s) 496, 778, 855, 1708, 1967, 2040, 2048, 2664, 2787
Bst6I CTCTTC 5 cut(s) 495, 1379, 1409, 1596, 2453
BstAPI GCANNNNNTGC 2 cut(s) 2390, 2858
BstAUI TGTACA 1 cut(s) 1282
BstBAI YACGTR 1 cut(s) 2756
BstC8I GCNNGC 9 cut(s) 22, 214, 1128, 1452, 1456, 1726, 1785, 2085, 2175
BstDSI CCRYGG 1 cut(s) 2690
BstENI CCTNNNNNAGG 1 cut(s) 1233
BstF5I GGATG 7 cut(s) 346, 982, 1840, 1902, 2008, 2025, 2290
BstFNI CGCG 1 cut(s) 1456
BstHHI GCGC 2 cut(s) 1456, 1458
BstKTI GATC 6 cut(s) 158, 226, 1138, 1309, 1648, 1874
BstMAI GTCTC 5 cut(s) 749, 1083, 1916, 2240, 2926
BstMBI GATC 6 cut(s) 155, 223, 1135, 1306, 1645, 1871
BstNI CCWGG 4 cut(s) 701, 726, 2229, 2763
BstNSI RCATGY 2 cut(s) 28, 1728
BstSCI CCNGG 4 cut(s) 699, 724, 2227, 2761
BstSFI CTRYAG 2 cut(s) 1707, 2428
BstUI CGCG 1 cut(s) 1456
BstV2I GAAGAC 5 cut(s) 266, 1001, 1343, 1560, 2664
BstX2I RGATCY 1 cut(s) 1645
BstXI CCANNNNNNTGG 1 cut(s) 601
BstYI RGATCY 1 cut(s) 1645
BstZ17I GTATAC 2 cut(s) 722, 2660
BsuI GTATCC 2 cut(s) 555, 2352
BsuRI GGCC 1 cut(s) 1213
BtgI CCRYGG 1 cut(s) 2690
BtsCI GGATG 7 cut(s) 346, 982, 1840, 1902, 2008, 2025, 2290
BtsI GCAGTG 1 cut(s) 1620
BtsIMutI CAGTG 4 cut(s) 5, 1620, 2247, 2480
Cac8I GCNNGC 9 cut(s) 22, 214, 1128, 1452, 1456, 1726, 1785, 2085, 2175
CaiI CAGNNNCTG 3 cut(s) 635, 2390, 2941
CciI TCATGA 3 cut(s) 277, 1354, 2887
CfoI GCGC 2 cut(s) 1456, 1458
Cfr13I GGNCC 6 cut(s) 807, 1560, 2103, 2701, 2743, 2759
CseI GACGC 3 cut(s) 731, 2179, 2658
CsiI ACCWGGT 1 cut(s) 2761
Csp6I GTAC 6 cut(s) 117, 856, 906, 1032, 1283, 1485
CviQI GTAC 6 cut(s) 117, 856, 906, 1032, 1283, 1485
DpnI GATC 6 cut(s) 157, 225, 1137, 1308, 1647, 1873
DpnII GATC 6 cut(s) 155, 223, 1135, 1306, 1645, 1871
DraI TTTAAA 1 cut(s) 328
Eam1104I CTCTTC 5 cut(s) 495, 1379, 1409, 1596, 2453
EarI CTCTTC 5 cut(s) 495, 1379, 1409, 1596, 2453
Eco130I CCWWGG 2 cut(s) 2165, 2704
Eco24I GRGCYC 1 cut(s) 1745
Eco32I GATATC 4 cut(s) 83, 1267, 1751, 1929
Eco47I GGWCC 6 cut(s) 807, 1560, 2103, 2701, 2743, 2759
Eco57I CTGAAG 4 cut(s) 492, 1034, 1430, 2717
EcoNI CCTNNNNNAGG 1 cut(s) 1233
EcoO109I RGGNCCY 2 cut(s) 2103, 2701
EcoRII CCWGG 4 cut(s) 699, 724, 2227, 2761
EcoRV GATATC 4 cut(s) 83, 1267, 1751, 1929
EcoT14I CCWWGG 2 cut(s) 2165, 2704
EcoT22I ATGCAT 4 cut(s) 94, 1730, 2290, 2563
EcoT38I GRGCYC 1 cut(s) 1745
ErhI CCWWGG 2 cut(s) 2165, 2704
Esp3I CGTCTC 1 cut(s) 749
FalI AAGNNNNNCTT 6 cut(s) 1528, 1560, 2841, 2873, 2907, 2939
FaqI GGGAC 4 cut(s) 436, 2116, 2537, 2805
FauI CCCGC 1 cut(s) 2913
FauNDI CATATG 3 cut(s) 1597, 2124, 2290
FblI GTMKAC 2 cut(s) 721, 2659
FokI GGATG 7 cut(s) 353, 989, 1847, 1909, 2012, 2015, 2297
FriOI GRGCYC 1 cut(s) 1745
FspBI CTAG 6 cut(s) 755, 1451, 1721, 1950, 2084, 2336
GlaI GCGC 2 cut(s) 1455, 1457
GsuI CTGGAG 3 cut(s) 1898, 1941, 2520
HaeIII GGCC 1 cut(s) 1213
HapII CCGG 1 cut(s) 404
HgaI GACGC 3 cut(s) 731, 2179, 2658
HhaI GCGC 2 cut(s) 1456, 1458
Hin6I GCGC 2 cut(s) 1454, 1456
HinP1I GCGC 2 cut(s) 1454, 1456
HincII GTYRAC 1 cut(s) 579
HindII GTYRAC 1 cut(s) 579
HpaI GTTAAC 1 cut(s) 579
HpaII CCGG 1 cut(s) 404
HphI GGTGA 6 cut(s) 404, 1126, 1367, 1697, 2126, 2891
Hpy166II GTNNAC 7 cut(s) 579, 594, 722, 1034, 1487, 2660, 2759
Hpy8I GTNNAC 7 cut(s) 579, 594, 722, 1034, 1487, 2660, 2759
HpyCH4III ACNGT 9 cut(s) 496, 778, 855, 1708, 1967, 2040, 2048, 2664, 2787
HpyCH4IV ACGT 3 cut(s) 1036, 1254, 2755
HpySE526I ACGT 3 cut(s) 1036, 1254, 2755
HspAI GCGC 2 cut(s) 1454, 1456
KspAI GTTAAC 1 cut(s) 579
Kzo9I GATC 6 cut(s) 155, 223, 1135, 1306, 1645, 1871
LguI GCTCTTC 2 cut(s) 495, 1596
LmnI GCTCC 2 cut(s) 2134, 2896
MabI ACCWGGT 1 cut(s) 2761
MaeI CTAG 6 cut(s) 755, 1451, 1721, 1950, 2084, 2336
MaeII ACGT 3 cut(s) 1036, 1254, 2755
MaeIII GTNAC 3 cut(s) 2607, 2765, 2954
MalI GATC 6 cut(s) 157, 225, 1137, 1308, 1647, 1873
MboI GATC 6 cut(s) 155, 223, 1135, 1306, 1645, 1871
MfeI CAATTG 1 cut(s) 918
MflI RGATCY 1 cut(s) 1645
MhlI GDGCHC 2 cut(s) 1745, 1806
MlyI GAGTC 1 cut(s) 1918
MmeI TCCRAC 1 cut(s) 2611
Mph1103I ATGCAT 4 cut(s) 94, 1730, 2290, 2563
MroXI GAANNNNTTC 1 cut(s) 477
MslI CAYNNNNRTG 1 cut(s) 975
MspA1I CMGCKG 4 cut(s) 20, 2368, 2433, 2908
MspI CCGG 1 cut(s) 404
MspR9I CCNGG 4 cut(s) 701, 726, 2229, 2763
MunI CAATTG 1 cut(s) 918
Mva1269I GAATGC 3 cut(s) 94, 832, 2587
MvaI CCWGG 4 cut(s) 701, 726, 2229, 2763
MvnI CGCG 1 cut(s) 1456
NdeI CATATG 3 cut(s) 1597, 2124, 2290
NdeII GATC 6 cut(s) 155, 223, 1135, 1306, 1645, 1871
NheI GCTAGC 2 cut(s) 1450, 2083
NlaIV GGNNCC 3 cut(s) 1770, 2104, 2130
NmuCI GTSAC 1 cut(s) 2954
NsiI ATGCAT 4 cut(s) 94, 1730, 2290, 2563
NspI RCATGY 2 cut(s) 28, 1728
PaeI GCATGC 1 cut(s) 1728
PagI TCATGA 3 cut(s) 277, 1354, 2887
PauI GCGCGC 1 cut(s) 1454
PciSI GCTCTTC 2 cut(s) 495, 1596
PcsI WCGNNNNNNNCGW 2 cut(s) 1033, 2632
PctI GAATGC 3 cut(s) 94, 832, 2587
PdmI GAANNNNTTC 1 cut(s) 477
PfoI TCCNGGA 1 cut(s) 699
PleI GAGTC 1 cut(s) 1917
PpsI GAGTC 1 cut(s) 1917
Ppu21I YACGTR 1 cut(s) 2756
PpuMI RGGWCCY 2 cut(s) 2103, 2701
Psp5II RGGWCCY 2 cut(s) 2103, 2701
Psp6I CCWGG 4 cut(s) 699, 724, 2227, 2761
PspGI CCWGG 4 cut(s) 699, 724, 2227, 2761
PspN4I GGNNCC 3 cut(s) 1770, 2104, 2130
PspPI GGNCC 6 cut(s) 807, 1560, 2103, 2701, 2743, 2759
PspPPI RGGWCCY 2 cut(s) 2103, 2701
PstNI CAGNNNCTG 3 cut(s) 635, 2390, 2941
PsuI RGATCY 1 cut(s) 1645
PteI GCGCGC 1 cut(s) 1454
PvuII CAGCTG 3 cut(s) 20, 2368, 2433
RsaI GTAC 6 cut(s) 118, 857, 907, 1033, 1284, 1486
RsaNI GTAC 6 cut(s) 117, 856, 906, 1032, 1283, 1485
RseI CAYNNNNRTG 1 cut(s) 975
SapI GCTCTTC 2 cut(s) 495, 1596
Sau3AI GATC 6 cut(s) 155, 223, 1135, 1306, 1645, 1871
Sau96I GGNCC 6 cut(s) 807, 1560, 2103, 2701, 2743, 2759
ScaI AGTACT 2 cut(s) 118, 857
SchI GAGTC 1 cut(s) 1918
ScrFI CCNGG 4 cut(s) 701, 726, 2229, 2763
SduI GDGCHC 2 cut(s) 1745, 1806
SexAI ACCWGGT 1 cut(s) 2761
SfcI CTRYAG 2 cut(s) 1707, 2428
SinI GGWCC 6 cut(s) 807, 1560, 2103, 2701, 2743, 2759
SmiMI CAYNNNNRTG 1 cut(s) 975
SpeI ACTAGT 1 cut(s) 1949
SphI GCATGC 1 cut(s) 1728
SsiI CCGC 3 cut(s) 781, 2393, 2906
SspI AATATT 3 cut(s) 1162, 1303, 1425
SspMI CTAG 6 cut(s) 755, 1451, 1721, 1950, 2084, 2336
StyD4I CCNGG 4 cut(s) 699, 724, 2227, 2761
StyI CCWWGG 2 cut(s) 2165, 2704
TaaI ACNGT 9 cut(s) 496, 778, 855, 1708, 1967, 2040, 2048, 2664, 2787
TaiI ACGT 3 cut(s) 1039, 1257, 2758
TaqI TCGA 1 cut(s) 154
TaqII GACCGA 1 cut(s) 216
TatI WGTACW 3 cut(s) 116, 855, 1282
TscAI CASTG 4 cut(s) 12, 1627, 2247, 2487
TseFI GTSAC 1 cut(s) 2954
Tsp45I GTSAC 1 cut(s) 2954
TspGWI ACGGA 4 cut(s) 737, 1909, 2002, 2369
TspRI CASTG 4 cut(s) 12, 1627, 2247, 2487
VpaK11BI GGWCC 6 cut(s) 807, 1560, 2103, 2701, 2743, 2759
XagI CCTNNNNNAGG 1 cut(s) 1233
XapI RAATTY 5 cut(s) 322, 1019, 1334, 1813, 2871
XceI RCATGY 2 cut(s) 28, 1728
XmiI GTMKAC 2 cut(s) 721, 2659
XmnI GAANNNNTTC 1 cut(s) 477
XspI CTAG 6 cut(s) 755, 1451, 1721, 1950, 2084, 2336
ZrmI AGTACT 2 cut(s) 118, 857
Zsp2I ATGCAT 4 cut(s) 94, 1730, 2290, 2563
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.