Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0005436

Physical Location & Seq

Genomic Coordinates Forward (+)

1608817 .. 1616137

Gene Structure 7321 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g02340.9

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2889 bp

ATGGCACCCACAGTCTCAGCTGTGCAACCTTGCTTCAGCGGGAATGGATTGAGAAGTGCCATAGCTTTCAAAGCTGAGAAGGGATATAGGAATGCTTTGGGTAGAAAAATGAGGTTCAGTAATTTTCTCTTTTCAACGGTATCAAGATTATGTTTTCGTCCAAAGCATAGTCTTGTCAAAAATAATTTGGAGGAAGTAGATATTTTTGGCATAGCAAGCATCTCAGATCGGTCAAAGTTGCTCAATAAGGTATCTGCTTTGGTTGGTTATGATAGTCTTGATGATTTGATTGAGAATGAAAGAGCTGAAAAGCAGTCCGGTATGCATGTTAGAGATGTCATAGATGAATTTGATGTCTCCTTGGTGTGTGCACGATTTCCATCAATCATTTTAGGTAGTTCCCCTCGGGTGGAATTGTATGATGGAACCACCAGTTTCAGTGAAAGGATGCTTTTGTCAACTCAAAGTGGTGAAGGATTTCTGTCTGATACTATGTGTGAAGAGCAGTCCGCAACTGTGGTTATTGAGGAAAACTCACATCAAACAGTTCCTGTGGAGGAATCTTCTAACAAGGTTTTGCTTAAATCACAAAATGATACTGGGTCTGTTCAGTTTTCCCTGGACAGTTCTATCAGTTGCATACCTGGAATAACTAAGAAGCGCTGTCGGCAGCTAGAAGACTGTGGCTTTCATACATTGCGGCAATTGCTTCACCACTTTCCTCGGACCTATGCGGATTTACAGAATGCTCAGATGAAAATTGATGATGGACAATACTTGATTTTCATTGGGAAGGTATTAAGTTCGAGGGGAATCAAAGCTAGTAGTTCTTTCTCATTTATTGAGGTAGTTGTTGGTTGCGAAATTATGGACGATGAATCAACTGAGCATTTGAATGATTCTGCTGATAGTAGAAGAAAGAAGACAATTTCTTTGCATCTGAAGAAATTTTTTCGTGGTGCTCGTTTTACTTCTCTACCCTTTCTTAGACTTGTTGAGGGAAAGCATAAAGAGGGGGACTTTGTATGTGTTAGTGGCAAGGTAAGGACAATGCCTGCCAAAGGTCACTATGAAATGAGAGAATACAATATTGATGTGCTTAAAGATGAAAACGAAGTGTCTTTTCATGCAAAAGGGAGGCCTTATCCTATATACCCTTCAAAAGGAGGTATCGATCCAAATGTTTTGAGAGACATCATTGCAAGAGTTGCACAAGTTTTGGCTGTCGATGTTGATCCTATTCCTAAAAATATCACTCAGGACTTTGGGCTGTTAGGCCTTCATGATGCGTATAAGGGGATTCACGAACCAAAGAGTATGGAAGAAGCTGATTTGGCTCGGAAAAGGCTAATATTTGATGAGTTCTTTTACCTGCAGTTAGCGCGCCTTTACCAAATGCTTGAAGGTCTTGGTACACAAATAGAGAAAGATGGATTGCTGGATAAGTACAGGAAACCTGAATCAAGTGCTGCTTATATGAAGGAATGGTCCATTCTTACCAAGAAGTTTTCAAAAGCTCTTCCATATACCCTTACTCCTAGTCAACTCACTGCCGTTTCAGAAATCATCTGGGATCTAAGGCAACCAGTTCCTATGAATCGGCTTTTGCAGGGTGATGTTGGTTGTGGGAAAACCGTGGTAGCTTTTCTAGCATGCATGGAGGTTATTGGCTCTGGATATCAGGCAGCTTTCATGGTTCCAACTGAGTTGCTTGCAGTCCAGCATTACGAGCACTTAAATAAATTGCTTGAAAATATGGAGGATGTTGAACGAAAACCTTCAATTGCTTTACTAACAGGCTCAACCCCATCAAAACAATCACGGATAATTCTTGAGGGTCTCAGGACTGGAGAAATATCAATGGTCGTTGGAACCACCAGTTTAATATCTGACAAAATCGAATTCTTTGCATTACGCATTGCAGTGGTGGATGAACAACACCGTTTTGGTGTGATCCAGAGAGGACGGTTTAACAGTAAGCTATACTATACCTCCATAAATTCTAGAATGGTAGCCGCCAGTTCAGATGTGACCTCAAAAGGTGACAACCATATGGCTCCTCATGTTCTTGCCATGTCAGCTACTCCTATCCCGAGAACACTTGCTCTTGCTTTATATGGGGATATGTCATTGACACAGATAACGGACTTACCTCCAGGAAGAATACCAGTTGAGACATTCATCATTGAAGGAAATGACAATGGATTTGAGGATGTTTATGAGATGATGCTGGACGAGTTAAAAGAAGGAGGGAGAGTCTATCTTGTGTATCCAGTTATTGAACAATCTGAACAGCTGCCACAACTTCGTGCTGCTGCGGCAGATTTTGAAGCTATATCTGATAGGTTTCAGGGCTACACTTGTGGATTGTTGCATGGAAGGATGAAGAGTGATGAGAAAGATGAAGCGTTGAGAAAGTTCAGATCTGGAGAAACAGATATACTGCTTTCCACACAAGTAATTGAGATTGGTGTTGATGTTCCGGATGCATCTATGATGGTTGTTATGAATGCTGAGAGATTTGGGATAGCTCAGTTACACCAACTTAGAGGACGAGTTGGACGAGGAGTGAGAAAGTCTAAATGTATACTTTTAGCATCTTCTTCCAGTAGTCTAACTCGGCTGATGGTCCTGGGGAAATCGTCAGATGGTTTTTATTTGGCAAACATGGACCTTCTTTTACGTGGACCTGGTAACTTGCTTGGCAAGAAACAGTCAGGACATCTTCCAGAGTTTCCTATTGCAAGATTGGAAGTAGATGGCAATATCTTACAAGAAGCGCATCTTGCTGCTCTGAAAGTGTTAGGTGCTTCTAATGATTTGGAGCAATTCCCGCTGCTTAAGGCAGAGCTTAGCATGAGACAGCCGCTGTCTATTCTGGGTGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03440 map03440

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

963

Amino Acids

107.05

Weight (kDa)

6.24

Isoelectric Point (pI)

41.91

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005436)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G01440
fragaria_vesca	FvH4_4g32470 FvH4_4g32470
malus_domestica	MD13G1025100.v1.1 MD16G1027600.v1.1 MD16G1027700.v1.1
prunus_persica	Prupe.1G325100_v2.0.a1 Prupe.1G325100_v2.0.a1 Prupe.1G325100_v2.0.a1 Prupe.1G325100_v2.0.a1 Prupe.1G325100_v2.0.a1 Prupe.1G325100_v2.0.a1 Prupe.1G325100_v2.0.a1 Prupe.1G325100_v2.0.a1 Prupe.1G325100_v2.0.a1 Prupe.1G325100_v2.0.a1 Prupe.1G325100_v2.0.a1
pyrus_communis	pycom13g02340 pycom16g02340
rosa_chinensis	RchiOBHm_Chr4g0441331
rosa_laevigata	RLG00000006101
rosa_multiflora	Rmu_co8457807.1_g000001
rosa_roxburghii	Rroxscaffold_5G00382220
rosa_rugosa	Rorug04G0332400
rosa_samantha	Rh4AG384400 Rh4BG398500 Rh4CG413600 Rh4DG391100
rosa_wichuraiana	Rw4G033180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1380
AccB1I	GGYRCC	1 cut(s)	4
AccI	GTMKAC	1 cut(s)	2587
AccII	CGCG	1 cut(s)	1384
AccIII	TCCGGA	1 cut(s)	2482
AciI	CCGC	8 cut(s)	39, 510, 700, 734, 2016, 2318, 2834, 2867
AclWI	GGATC	4 cut(s)	1169, 1229, 1581, 1948
AcsI	RAATTY	4 cut(s)	347, 947, 1901, 1999
AcuI	CTGAAG	2 cut(s)	19, 962
AfaI	GTAC	2 cut(s)	1414, 1448
AfeI	AGCGCT	1 cut(s)	662
AfiI	CCNNNNNNNGG	3 cut(s)	409, 1061, 1163
AflII	CTTAAG	1 cut(s)	2840
AjnI	CCWGG	5 cut(s)	618, 643, 2155, 2631, 2689
Alw21I	GWGCWC	3 cut(s)	373, 964, 1734
Alw26I	GTCTC	6 cut(s)	19, 361, 1185, 1844, 2168, 2854
Alw44I	GTGCAC	1 cut(s)	369
AlwI	GGATC	4 cut(s)	1169, 1229, 1581, 1948
AlwNI	CAGNNNCTG	2 cut(s)	551, 2869
Ama87I	CYCGRG	2 cut(s)	405, 2092
Aor13HI	TCCGGA	1 cut(s)	2482
Aor51HI	AGCGCT	1 cut(s)	662
AoxI	GGCC	2 cut(s)	1139, 1276
ApaLI	GTGCAC	1 cut(s)	369
ApeKI	GCWGC	8 cut(s)	670, 1469, 1685, 2296, 2312, 2315, 2789, 2836
ApoI	RAATTY	4 cut(s)	347, 947, 1901, 1999
ArsI	GACNNNNNNTTYG	4 cut(s)	916, 948, 2189, 2221
Asp700I	GAANNNNTTC	2 cut(s)	477, 1777
AspLEI	GCGC	4 cut(s)	663, 1384, 1386, 2782
AspS9I	GGNCC	5 cut(s)	726, 1488, 2629, 2671, 2687
AsuHPI	GGTGA	4 cut(s)	482, 704, 1625, 2054
AvaI	CYCGRG	2 cut(s)	405, 2092
AvaII	GGWCC	5 cut(s)	726, 1488, 2629, 2671, 2687
BaeGI	GKGCMC	1 cut(s)	373
BanI	GGYRCC	1 cut(s)	4
BbsI	GAAGAC	2 cut(s)	684, 929
Bbv12I	GWGCWC	3 cut(s)	373, 964, 1734
BbvI	GCAGC	8 cut(s)	682, 1456, 1697, 2283, 2299, 2302, 2776, 2823
BccI	CCATC	9 cut(s)	388, 416, 761, 1424, 1816, 2491, 2620, 2642, 2753
BceAI	ACGGC	1 cut(s)	1538
BcgI	CGANNNNNNTGC	2 cut(s)	1889, 1923
BciT130I	CCWGG	5 cut(s)	620, 645, 2157, 2633, 2691
BciVI	GTATCC	1 cut(s)	2280
BcoDI	GTCTC	6 cut(s)	19, 361, 1185, 1844, 2168, 2854
BfaI	CTAG	5 cut(s)	674, 822, 1539, 1649, 2004
BfmI	CTRYAG	1 cut(s)	1373
BfoI	RGCGCY	1 cut(s)	664
BfrI	CTTAAG	1 cut(s)	2840
BfuAI	ACCTGC	1 cut(s)	1380
BfuI	GTATCC	1 cut(s)	2280
BglII	AGATCT	1 cut(s)	2423
BlpI	GCTNAGC	1 cut(s)	2852
Bme1390I	CCNGG	5 cut(s)	620, 645, 2157, 2633, 2691
Bme18I	GGWCC	5 cut(s)	726, 1488, 2629, 2671, 2687
BmeT110I	CYCGRG	2 cut(s)	405, 2092
BmgT120I	GGNCC	5 cut(s)	726, 1488, 2629, 2671, 2687
BmiI	GGNNCC	5 cut(s)	6, 427, 1698, 1873, 2058
BmrFI	CCNGG	5 cut(s)	620, 645, 2157, 2633, 2691
BmrI	ACTGGG	1 cut(s)	609
BmsI	GCATC	9 cut(s)	228, 438, 946, 1276, 2217, 2476, 2498, 2606, 2791
BmuI	ACTGGG	1 cut(s)	609
BpiI	GAAGAC	2 cut(s)	684, 929
BplI	GAGNNNNNCTC	2 cut(s)	518, 550
BpmI	CTGGAG	3 cut(s)	1869, 2139, 2448
Bpu1102I	GCTNAGC	1 cut(s)	2852
BpuEI	CTTGAG	1 cut(s)	1853
Bsa29I	ATCGAT	1 cut(s)	1173
BsaAI	YACGTR	1 cut(s)	2684
BsaBI	GATNNNNATC	2 cut(s)	379, 1233
BsaI	GGTCTC	1 cut(s)	1844
BsaJI	CCNNGG	6 cut(s)	360, 404, 618, 722, 1635, 2632
BsaWI	WCCGGW	2 cut(s)	317, 2482
BsaXI	ACNNNNNCTCC	6 cut(s)	1519, 1549, 1976, 2006, 2241, 2271
Bsc4I	CCNNNNNNNGG	3 cut(s)	409, 1061, 1163
Bse1I	ACTGG	9 cut(s)	432, 604, 1586, 1852, 1878, 2019, 2168, 2273, 2607
Bse3DI	GCAATG	3 cut(s)	695, 1197, 1917
Bse8I	GATNNNNATC	2 cut(s)	379, 1233
BseAI	TCCGGA	1 cut(s)	2482
BseBI	CCWGG	5 cut(s)	620, 645, 2157, 2633, 2691
BseCI	ATCGAT	1 cut(s)	1173
BseDI	CCNNGG	6 cut(s)	360, 404, 618, 722, 1635, 2632
BseGI	GGATG	6 cut(s)	453, 1768, 1936, 2218, 2388, 2491
BseJI	GATNNNNATC	2 cut(s)	379, 1233
BseLI	CCNNNNNNNGG	3 cut(s)	409, 1061, 1163
BseMI	GCAATG	3 cut(s)	695, 1197, 1917
BseNI	ACTGG	9 cut(s)	432, 604, 1586, 1852, 1878, 2019, 2168, 2273, 2607
BsePI	GCGCGC	1 cut(s)	1382
BseRI	GAGGAG	2 cut(s)	2049, 2580
BseSI	GKGCMC	1 cut(s)	373
BseXI	GCAGC	8 cut(s)	682, 1456, 1697, 2283, 2299, 2302, 2776, 2823
Bsh1236I	CGCG	1 cut(s)	1384
BshFI	GGCC	2 cut(s)	1141, 1278
BshNI	GGYRCC	1 cut(s)	4
BshVI	ATCGAT	1 cut(s)	1173
BsiHKAI	GWGCWC	3 cut(s)	373, 964, 1734
BsiHKCI	CYCGRG	2 cut(s)	405, 2092
BsiSI	CCGG	2 cut(s)	318, 2483
BslFI	GGGAC	1 cut(s)	1031
BslI	CCNNNNNNNGG	3 cut(s)	409, 1061, 1163
BsmAI	GTCTC	6 cut(s)	19, 361, 1185, 1844, 2168, 2854
BsmFI	GGGAC	1 cut(s)	1031
BsmI	GAATGC	3 cut(s)	97, 751, 2515
BsnI	GGCC	2 cut(s)	1141, 1278
Bso31I	GGTCTC	1 cut(s)	1844
BsoBI	CYCGRG	2 cut(s)	405, 2092
Bsp1286I	GDGCHC	3 cut(s)	373, 964, 1734
Bsp13I	TCCGGA	1 cut(s)	2482
Bsp143I	GATC	6 cut(s)	226, 1174, 1234, 1573, 1953, 2423
Bsp1720I	GCTNAGC	1 cut(s)	2852
BspACI	CCGC	8 cut(s)	39, 510, 700, 734, 2016, 2318, 2834, 2867
BspANI	GGCC	2 cut(s)	1141, 1278
BspDI	ATCGAT	1 cut(s)	1173
BspEI	TCCGGA	1 cut(s)	2482
BspFNI	CGCG	1 cut(s)	1384
BspHI	TCATGA	1 cut(s)	1282
BspLI	GGNNCC	5 cut(s)	6, 427, 1698, 1873, 2058
BspMAI	CTGCAG	1 cut(s)	1377
BspMI	ACCTGC	1 cut(s)	1380
BspPI	GGATC	4 cut(s)	1169, 1229, 1581, 1948
BspQI	GCTCTTC	2 cut(s)	495, 1524
BspT107I	GGYRCC	1 cut(s)	4
BspTI	CTTAAG	1 cut(s)	2840
BspTNI	GGTCTC	1 cut(s)	1844
BsrDI	GCAATG	3 cut(s)	695, 1197, 1917
BsrI	ACTGG	9 cut(s)	432, 604, 1586, 1852, 1878, 2019, 2168, 2273, 2607
BssECI	CCNNGG	6 cut(s)	360, 404, 618, 722, 1635, 2632
BssHII	GCGCGC	1 cut(s)	1382
BssMI	GATC	6 cut(s)	226, 1174, 1234, 1573, 1953, 2423
BssNAI	GTATAC	1 cut(s)	2588
BssT1I	CCWWGG	1 cut(s)	360
Bst1107I	GTATAC	1 cut(s)	2588
Bst2UI	CCWGG	5 cut(s)	620, 645, 2157, 2633, 2691
Bst6I	CTCTTC	3 cut(s)	495, 1524, 2381
BstAFI	CTTAAG	1 cut(s)	2840
BstAPI	GCANNNNNTGC	1 cut(s)	1208
BstBAI	YACGTR	1 cut(s)	2684
BstC8I	GCNNGC	5 cut(s)	217, 1056, 1384, 1654, 1713
BstDSI	CCRYGG	1 cut(s)	1635
BstENI	CCTNNNNNAGG	2 cut(s)	1059, 1161
BstF5I	GGATG	6 cut(s)	453, 1768, 1936, 2218, 2388, 2491
BstFNI	CGCG	1 cut(s)	1384
BstH2I	RGCGCY	1 cut(s)	664
BstHHI	GCGC	4 cut(s)	663, 1384, 1386, 2782
BstKTI	GATC	6 cut(s)	229, 1177, 1237, 1576, 1956, 2426
BstMAI	GTCTC	6 cut(s)	19, 361, 1185, 1844, 2168, 2854
BstMBI	GATC	6 cut(s)	226, 1174, 1234, 1573, 1953, 2423
BstNI	CCWGG	5 cut(s)	620, 645, 2157, 2633, 2691
BstNSI	RCATGY	2 cut(s)	329, 1656
BstSCI	CCNGG	5 cut(s)	618, 643, 2155, 2631, 2689
BstSFI	CTRYAG	1 cut(s)	1373
BstSLI	GKGCMC	1 cut(s)	373
BstUI	CGCG	1 cut(s)	1384
BstV1I	GCAGC	8 cut(s)	682, 1456, 1697, 2283, 2299, 2302, 2776, 2823
BstV2I	GAAGAC	2 cut(s)	684, 929
BstX2I	RGATCY	2 cut(s)	1573, 2423
BstYI	RGATCY	2 cut(s)	1573, 2423
BstZ17I	GTATAC	1 cut(s)	2588
Bsu15I	ATCGAT	1 cut(s)	1173
BsuI	GTATCC	1 cut(s)	2280
BsuRI	GGCC	2 cut(s)	1141, 1278
BsuTUI	ATCGAT	1 cut(s)	1173
BtgI	CCRYGG	1 cut(s)	1635
BtsCI	GGATG	6 cut(s)	453, 1768, 1936, 2218, 2388, 2491
BtsI	GCAGTG	2 cut(s)	1548, 1929
BtsIMutI	CAGTG	3 cut(s)	445, 1548, 1929
BveI	ACCTGC	1 cut(s)	1380
Cac8I	GCNNGC	5 cut(s)	217, 1056, 1384, 1654, 1713
CaiI	CAGNNNCTG	2 cut(s)	551, 2869
CciI	TCATGA	1 cut(s)	1282
CfoI	GCGC	4 cut(s)	663, 1384, 1386, 2782
Cfr13I	GGNCC	5 cut(s)	726, 1488, 2629, 2671, 2687
ClaI	ATCGAT	1 cut(s)	1173
CsiI	ACCWGGT	1 cut(s)	2689
Csp6I	GTAC	2 cut(s)	1413, 1447
CviQI	GTAC	2 cut(s)	1413, 1447
DpnI	GATC	6 cut(s)	228, 1176, 1236, 1575, 1955, 2425
DpnII	GATC	6 cut(s)	226, 1174, 1234, 1573, 1953, 2423
Eam1104I	CTCTTC	3 cut(s)	495, 1524, 2381
EarI	CTCTTC	3 cut(s)	495, 1524, 2381
Eco130I	CCWWGG	1 cut(s)	360
Eco147I	AGGCCT	2 cut(s)	1141, 1278
Eco31I	GGTCTC	1 cut(s)	1844
Eco32I	GATATC	1 cut(s)	1679
Eco47I	GGWCC	5 cut(s)	726, 1488, 2629, 2671, 2687
Eco47III	AGCGCT	1 cut(s)	662
Eco57I	CTGAAG	2 cut(s)	19, 962
Eco88I	CYCGRG	2 cut(s)	405, 2092
EcoNI	CCTNNNNNAGG	2 cut(s)	1059, 1161
EcoRI	GAATTC	1 cut(s)	1901
EcoRII	CCWGG	5 cut(s)	618, 643, 2155, 2631, 2689
EcoRV	GATATC	1 cut(s)	1679
EcoT14I	CCWWGG	1 cut(s)	360
EcoT22I	ATGCAT	3 cut(s)	327, 1658, 2491
ErhI	CCWWGG	1 cut(s)	360
FalI	AAGNNNNNCTT	4 cut(s)	1456, 1488, 2769, 2801
FaqI	GGGAC	1 cut(s)	1031
FauI	CCCGC	2 cut(s)	32, 2841
FauNDI	CATATG	1 cut(s)	2052
FblI	GTMKAC	1 cut(s)	2587
FokI	GGATG	6 cut(s)	460, 1775, 1943, 2225, 2395, 2498
FspBI	CTAG	5 cut(s)	674, 822, 1539, 1649, 2004
GlaI	GCGC	4 cut(s)	662, 1383, 1385, 2781
GsuI	CTGGAG	3 cut(s)	1869, 2139, 2448
HaeII	RGCGCY	1 cut(s)	664
HaeIII	GGCC	2 cut(s)	1141, 1278
HapII	CCGG	2 cut(s)	318, 2483
HhaI	GCGC	4 cut(s)	663, 1384, 1386, 2782
Hin6I	GCGC	4 cut(s)	661, 1382, 1384, 2780
HinP1I	GCGC	4 cut(s)	661, 1382, 1384, 2780
HincII	GTYRAC	2 cut(s)	459, 1544
HindII	GTYRAC	2 cut(s)	459, 1544
HinfI	GANTC	8 cut(s)	560, 813, 878, 899, 1300, 1460, 1597, 2256
HpaII	CCGG	2 cut(s)	318, 2483
HphI	GGTGA	4 cut(s)	482, 704, 1625, 2054
Hpy166II	GTNNAC	6 cut(s)	371, 459, 1415, 1544, 2588, 2687
Hpy8I	GTNNAC	6 cut(s)	371, 459, 1415, 1544, 2588, 2687
HpyCH4IV	ACGT	1 cut(s)	2683
HpySE526I	ACGT	1 cut(s)	2683
HspAI	GCGC	4 cut(s)	661, 1382, 1384, 2780
Kpn2I	TCCGGA	1 cut(s)	2482
Kzo9I	GATC	6 cut(s)	226, 1174, 1234, 1573, 1953, 2423
LguI	GCTCTTC	2 cut(s)	495, 1524
LmnI	GCTCC	2 cut(s)	2062, 2824
Lsp1109I	GCAGC	8 cut(s)	682, 1456, 1697, 2283, 2299, 2302, 2776, 2823
LweI	GCATC	9 cut(s)	228, 438, 946, 1276, 2217, 2476, 2498, 2606, 2791
MabI	ACCWGGT	1 cut(s)	2689
MaeI	CTAG	5 cut(s)	674, 822, 1539, 1649, 2004
MaeII	ACGT	1 cut(s)	2683
MaeIII	GTNAC	6 cut(s)	1064, 2029, 2042, 2535, 2693, 2882
MalI	GATC	6 cut(s)	228, 1176, 1236, 1575, 1955, 2425
MboI	GATC	6 cut(s)	226, 1174, 1234, 1573, 1953, 2423
MfeI	CAATTG	2 cut(s)	704, 1782
MflI	RGATCY	2 cut(s)	1573, 2423
MhlI	GDGCHC	3 cut(s)	373, 964, 1734
MlyI	GAGTC	1 cut(s)	2265
MmeI	TCCRAC	3 cut(s)	1724, 1849, 2539
Mph1103I	ATGCAT	3 cut(s)	327, 1658, 2491
MroI	TCCGGA	1 cut(s)	2482
MroXI	GAANNNNTTC	2 cut(s)	477, 1777
MseI	TTAA	8 cut(s)	582, 800, 1101, 1736, 1883, 1971, 2240, 2841
MslI	CAYNNNNRTG	2 cut(s)	894, 1922
MspA1I	CMGCKG	5 cut(s)	20, 39, 2296, 2836, 2869
MspCI	CTTAAG	1 cut(s)	2840
MspI	CCGG	2 cut(s)	318, 2483
MspR9I	CCNGG	5 cut(s)	620, 645, 2157, 2633, 2691
MunI	CAATTG	2 cut(s)	704, 1782
Mva1269I	GAATGC	3 cut(s)	97, 751, 2515
MvaI	CCWGG	5 cut(s)	620, 645, 2157, 2633, 2691
MvnI	CGCG	1 cut(s)	1384
NdeI	CATATG	1 cut(s)	2052
NdeII	GATC	6 cut(s)	226, 1174, 1234, 1573, 1953, 2423
NlaIV	GGNNCC	5 cut(s)	6, 427, 1698, 1873, 2058
NmeAIII	GCCGAG	1 cut(s)	2599
NmuCI	GTSAC	4 cut(s)	1064, 2029, 2042, 2882
NsiI	ATGCAT	3 cut(s)	327, 1658, 2491
NspI	RCATGY	2 cut(s)	329, 1656
PaeI	GCATGC	1 cut(s)	1656
PagI	TCATGA	1 cut(s)	1282
PauI	GCGCGC	1 cut(s)	1382
PceI	AGGCCT	2 cut(s)	1141, 1278
PciSI	GCTCTTC	2 cut(s)	495, 1524
PcsI	WCGNNNNNNNCGW	2 cut(s)	961, 2560
PctI	GAATGC	3 cut(s)	97, 751, 2515
PdmI	GAANNNNTTC	2 cut(s)	477, 1777
PfeI	GAWTC	7 cut(s)	560, 813, 878, 899, 1300, 1460, 1597
PfoI	TCCNGGA	1 cut(s)	2155
PleI	GAGTC	1 cut(s)	2264
PpsI	GAGTC	1 cut(s)	2264
Ppu21I	YACGTR	1 cut(s)	2684
Psp6I	CCWGG	5 cut(s)	618, 643, 2155, 2631, 2689
PspGI	CCWGG	5 cut(s)	618, 643, 2155, 2631, 2689
PspN4I	GGNNCC	5 cut(s)	6, 427, 1698, 1873, 2058
PspPI	GGNCC	5 cut(s)	726, 1488, 2629, 2671, 2687
PstI	CTGCAG	1 cut(s)	1377
PstNI	CAGNNNCTG	2 cut(s)	551, 2869
PsuI	RGATCY	2 cut(s)	1573, 2423
PteI	GCGCGC	1 cut(s)	1382
PvuII	CAGCTG	2 cut(s)	20, 2296
RsaI	GTAC	2 cut(s)	1414, 1448
RsaNI	GTAC	2 cut(s)	1413, 1447
RseI	CAYNNNNRTG	2 cut(s)	894, 1922
SapI	GCTCTTC	2 cut(s)	495, 1524
SaqAI	TTAA	8 cut(s)	582, 800, 1101, 1736, 1883, 1971, 2240, 2841
Sau3AI	GATC	6 cut(s)	226, 1174, 1234, 1573, 1953, 2423
Sau96I	GGNCC	5 cut(s)	726, 1488, 2629, 2671, 2687
SchI	GAGTC	1 cut(s)	2265
ScrFI	CCNGG	5 cut(s)	620, 645, 2157, 2633, 2691
SduI	GDGCHC	3 cut(s)	373, 964, 1734
SexAI	ACCWGGT	1 cut(s)	2689
SfaNI	GCATC	9 cut(s)	228, 438, 946, 1276, 2217, 2476, 2498, 2606, 2791
SfcI	CTRYAG	1 cut(s)	1373
SinI	GGWCC	5 cut(s)	726, 1488, 2629, 2671, 2687
SmiMI	CAYNNNNRTG	2 cut(s)	894, 1922
SmlI	CTYRAG	2 cut(s)	1832, 2840
SmoI	CTYRAG	2 cut(s)	1832, 2840
SphI	GCATGC	1 cut(s)	1656
SseBI	AGGCCT	2 cut(s)	1141, 1278
SsiI	CCGC	8 cut(s)	39, 510, 700, 734, 2016, 2318, 2834, 2867
SspI	AATATT	2 cut(s)	1090, 1353
SspMI	CTAG	5 cut(s)	674, 822, 1539, 1649, 2004
StuI	AGGCCT	2 cut(s)	1141, 1278
StyD4I	CCNGG	5 cut(s)	618, 643, 2155, 2631, 2689
StyI	CCWWGG	1 cut(s)	360
TaiI	ACGT	1 cut(s)	2686
TaqI	TCGA	4 cut(s)	806, 1173, 1227, 1899
TaqII	GACCGA	1 cut(s)	219
TatI	WGTACW	1 cut(s)	1446
TauI	GCSGC	4 cut(s)	703, 2018, 2321, 2869
TfiI	GAWTC	7 cut(s)	560, 813, 878, 899, 1300, 1460, 1597
Tru1I	TTAA	8 cut(s)	582, 800, 1101, 1736, 1883, 1971, 2240, 2841
Tru9I	TTAA	8 cut(s)	582, 800, 1101, 1736, 1883, 1971, 2240, 2841
TscAI	CASTG	3 cut(s)	445, 1555, 1929
TseFI	GTSAC	4 cut(s)	1064, 2029, 2042, 2882
TseI	GCWGC	8 cut(s)	670, 1469, 1685, 2296, 2312, 2315, 2789, 2836
Tsp45I	GTSAC	4 cut(s)	1064, 2029, 2042, 2882
TspGWI	ACGGA	2 cut(s)	1837, 2159
TspRI	CASTG	3 cut(s)	445, 1555, 1929
Vha464I	CTTAAG	1 cut(s)	2840
VneI	GTGCAC	1 cut(s)	369
VpaK11BI	GGWCC	5 cut(s)	726, 1488, 2629, 2671, 2687
XagI	CCTNNNNNAGG	2 cut(s)	1059, 1161
XapI	RAATTY	4 cut(s)	347, 947, 1901, 1999
XbaI	TCTAGA	1 cut(s)	2003
XceI	RCATGY	2 cut(s)	329, 1656
XmiI	GTMKAC	1 cut(s)	2587
XmnI	GAANNNNTTC	2 cut(s)	477, 1777
XspI	CTAG	5 cut(s)	674, 822, 1539, 1649, 2004
Zsp2I	ATGCAT	3 cut(s)	327, 1658, 2491

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.