AT2G02090

SNF2 family N-terminal domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0017196
Physical Location & Seq
Forward (+)
523223 .. 527068
3846 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G02090.1

Sequence Viewer

Length: 2292 bp
ATGAAACGCGATTTCGACGAAATCTCCGAGGAAGAGTGGTCTCAACACTCGTTTAACGCTTCGCGAGTTCTTAAACGACCACGGACTCCGAAGAAGACTCGCGCGGCGACGAATCCAACGCCGTCGATTGAGTCTTTTGCGTTTAGGAGACCTTCGACGGCGATGACGATTGAGAGTAATAGCAGCGATGGTGATTGTGTTGAGATTGAGGATTTGGGAGATTCGGATTCGGATGTGAAGATTGTGAATGGTGAGGATTTGTTGTTAGAGGATGAAGAAGAAGTGGAAGAGACTAAGGTTGTGATGCGCGCTGCGAGAGTTGGTAGGAGATTTGTGATTGAAGATGAAGAAGCGAGTGATGATGATGATGATGAGGCTGAGAGTAGTGCTAGTGAGGATGAATTTGGAGGAGGAGGAGGAGGAAGTGGAGGAAGGAGAGGAGAAGATGAAGATGTTGTGGGGAAGGCATTGCAAAAGTGTGCTAAAATCTCAGCGGATCTTCGAAAAGAGCTTTATGGTACTTCTTCTGGTGTTACTGATAGATACTCTGAAGTTGAAACTTCTACTGTCAGGATTGTCACACAGAATGATATTGATGATGCATGTAAAGCAGAGGATTCTGATTTTCAGCCTATACTCAAGCCGTACCAGTTAGTTGGTGTTAACTTTCTTCTTCTGTTGTATAAGAAAGGAATTGAAGGAGCCATTTTAGCCGATGAGATGGGTCTTGGAAAGACCATTCAGGCAATCACATATTTAACCCTCCTAAGTCGCTTAAACAATGACCCTGGTCCTCATTTGGTTGTATGCCCTGCCTCTGTCTTGGAAAACTGGGAGAGAGAGCTCAGAAAATGGTGTCCGTCGTTTACTGTACTTCAATACCACGGAGCTGCGAGAGCAGCCTACTCAAGAGAATTGAATTCTTTGTCAAAAGCTGGGAAGCCACCACCATTCAATGTGCTTCTTGTGTGTTACTCTCTGTTTGAACGGCATAGTGAACAACAGAAAGATGACCGAAAAGTACTGAAACGGTGGCGCTGGAGCTGTGTTTTGATGGATGAAGCCCATGCGTTAAAGGATAAGAATAGTTATAGGTGGAAAAACTTGATGTCTGTGGCCAGAAACGCAAACCAGCGTCTTATGCTTACAGGAACGCCTCTACAAAATGATTTGCATGAACTATGGTCGCTGTTGGAGTTCATGTTGCCTGATATATTTACGACAGAGAATGTTGACTTGAAGAAGTTGTTGAATGCAGAAGATACTGAGTTGATTACTCGAATGAAATCTATCTTAGGTCCTTTCATCTTGAGGCGTTTAAAATCTGATGTCATGCAGCAACTTGTTCCGAAGATACAGCGGGTTGAATATGTATTAATGGAGAGAAAGCAGGAAGATGCATATAAAGAAGCCATAGAGGAGTATCGTGCTGCTTCTCAAGCACGGCTTGTGAAGCTTTCATCAAAATCCTTGAATTCTTTAGCCAAGGCACTTCCAAAGCGTCAAATTTCAAACTATTTTACTCAATTCCGGAAGATTGCAAACCATCCATTGTTAATTAGGCGGATATACAGCGATGAGGATGTCATTCGCATCGCCAGGAAATTGCACCCAATCGGTGCATTTGGATTTGAATGTTCCTTGGATAGAGTTATCGAGGAAGTTAAGGGTTTCAACGATTTCCGTATCCACCAGCTTTTGTTCCAATATGGAGTTAACGATACCAAAGGAACTCTCTCAGACAAACATGTCATGCTCTCAGCAAAATGTCGGACATTAGCTGAGCTTCTCCCTTCAATGAAGAAATCCGGCCATCGTGTTCTAATATTTAGTCAATGGACATCGATGCTCGATATCTTAGAATGGACACTTGATGTCATCGGCGTTACATACCGAAGACTTGACGGCAGTACTCAAGTTACAGATAGACAAACCATAGTCGACACATTCAACAACGATAAGTCGATATTCGCATGTCTCTTGTCAACTCGAGCAGGTGGACAAGGTCTTAATTTAACCGGAGCGGATACAGTCATTATTCACGATATGGATTTTAATCCACAGATTGATCGGCAAGCTGAAGATCGTTGCCATCGTATTGGTCAAACAAAACCAGTCACTATCTTCAGACTGGTGACGAAATCGACGGTTGATGAGAACATCTACGAGATAGCGAAGCGGAAACTAGTTCTTGATGCGGCGGTTCTAGAGTCCGGAGTTCACGTAGATGACAACGGAGACACGCCTGAGAAAACCATGGGAGAGATTCTTGCTTCTCTTCTCATGGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000018 GO:0000228 GO:0000729 GO:0000785 GO:0000792 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005657 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006325 GO:0006338 GO:0006355 GO:0006464 GO:0006476 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0008150 GO:0008152 GO:0009117 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010225 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016043 GO:0016363 GO:0016569 GO:0016570 GO:0016575 GO:0019219 GO:0019222 GO:0019538 GO:0019637 GO:0022402 GO:0022607 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0033554 GO:0034399 GO:0034641 GO:0034644 GO:0035601 GO:0035861 GO:0036211 GO:0043044 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043596 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044281 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0045893 GO:0045935 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051259 GO:0051260 GO:0051276 GO:0051304 GO:0051716 GO:0055086 GO:0060255 GO:0065003 GO:0065007 GO:0070013 GO:0070932 GO:0070933 GO:0071214 GO:0071478 GO:0071482 GO:0071494 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0090734 GO:0097159 GO:0098732 GO:0104004 GO:1901360 GO:1901363 GO:1901564 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04550 map04550
Pfam Domains
Protein Families
Helicase_C SNF2_N

Protein Analysis

763

Amino Acids

86.28

Weight (kDa)

5.52

Isoelectric Point (pI)

39.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ResIII PF04851 213 - 386 1.2e-07 Type III restriction enzyme, res subunit
SNF2-rel_dom PF00176 216 - 517 1.7e-65 SNF2-related domain
DEAD PF00270 236 - 389 9.7e-06 DEAD/DEAH box helicase
Helicase_C PF00271 589 - 701 5.8e-25 Helicase conserved C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0017196)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G02090
fragaria_vesca FvH4_4g36060
malus_domestica MD16G1009400.v1.1
prunus_persica Prupe.1G341200_v2.0.a1 Prupe.1G341200_v2.0.a1
pyrus_communis pycom16g00910
rosa_chinensis RchiOBHm_Chr4g0445681
rosa_laevigata RLG00000005717
rosa_multiflora Rmu_sc0003637.1_g000018
rosa_roxburghii Rroxscaffold_5G00386160
rosa_rugosa Rorug04G0364700
rosa_samantha Rh4AG425600
rosa_wichuraiana Rw4G036460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1985
AasI GACNNNNNNGTC 1 cut(s) 1748
Acc36I ACCTGC 1 cut(s) 1985
AccBSI CCGCTC 1 cut(s) 2024
AccI GTMKAC 1 cut(s) 1941
AccII CGCG 5 cut(s) 9, 64, 102, 104, 309
AccIII TCCGGA 2 cut(s) 1530, 2213
AciI CCGC 8 cut(s) 104, 494, 1360, 1564, 2024, 2179, 2198, 2201
AclWI GGATC 1 cut(s) 504
AcoI YGGCCR 2 cut(s) 1116, 1810
AcsI RAATTY 4 cut(s) 401, 919, 1474, 1506
AcuI CTGAAG 3 cut(s) 570, 2100, 2110
AfaI GTAC 5 cut(s) 520, 647, 873, 1023, 1912
AflIII ACRYGT 1 cut(s) 1747
AhlI ACTAGT 1 cut(s) 2185
AjnI CCWGG 2 cut(s) 787, 1598
Alw21I GWGCWC 1 cut(s) 846
Alw26I GTCTC 5 cut(s) 45, 142, 284, 1982, 2232
AlwI GGATC 1 cut(s) 504
Ama87I CYCGRG 1 cut(s) 1989
Aor13HI TCCGGA 2 cut(s) 1530, 2213
AoxI GGCC 2 cut(s) 1116, 1810
ApeKI GCWGC 6 cut(s) 183, 311, 890, 899, 1336, 1430
ApoI RAATTY 4 cut(s) 401, 919, 1474, 1506
AseI ATTAAT 1 cut(s) 1376
AspLEI GCGC 4 cut(s) 104, 309, 311, 1038
AspS9I GGNCC 2 cut(s) 791, 1298
AsuHPI GGTGA 3 cut(s) 203, 263, 2146
AsuII TTCGAA 1 cut(s) 502
AvaI CYCGRG 1 cut(s) 1989
AvaII GGWCC 2 cut(s) 791, 1298
BalI TGGCCA 1 cut(s) 1118
BanII GRGCYC 1 cut(s) 846
BbsI GAAGAC 2 cut(s) 101, 1903
Bbv12I GWGCWC 1 cut(s) 846
BbvI GCAGC 6 cut(s) 195, 298, 877, 911, 1348, 1417
BccI CCATC 6 cut(s) 182, 715, 1048, 1554, 1821, 2100
BceAI ACGGC 6 cut(s) 106, 174, 628, 1004, 1460, 1921
BciT130I CCWGG 2 cut(s) 789, 1600
BciVI GTATCC 2 cut(s) 1697, 2020
BcoDI GTCTC 5 cut(s) 45, 142, 284, 1982, 2232
BcuI ACTAGT 1 cut(s) 2185
BfaI CTAG 3 cut(s) 390, 2186, 2207
BfoI RGCGCY 1 cut(s) 1039
BfuAI ACCTGC 1 cut(s) 1985
BfuI GTATCC 2 cut(s) 1697, 2020
BisI GCNGC 8 cut(s) 105, 184, 312, 891, 900, 1337, 1431, 2199
BlpI GCTNAGC 1 cut(s) 1782
BlsI GCNGC 8 cut(s) 106, 185, 313, 892, 901, 1338, 1432, 2200
BmcAI AGTACT 2 cut(s) 1023, 1912
Bme1390I CCNGG 2 cut(s) 789, 1600
Bme18I GGWCC 2 cut(s) 791, 1298
BmeT110I CYCGRG 1 cut(s) 1989
BmgT120I GGNCC 2 cut(s) 791, 1298
BmiI GGNNCC 1 cut(s) 703
BmrFI CCNGG 2 cut(s) 789, 1600
BmrI ACTGGG 1 cut(s) 841
BmsI GCATC 6 cut(s) 294, 589, 1387, 1602, 1836, 2185
BmuI ACTGGG 1 cut(s) 841
BoxI GACNNNNGTC 1 cut(s) 789
BpiI GAAGAC 2 cut(s) 101, 1903
BpmI CTGGAG 1 cut(s) 1060
Bpu1102I GCTNAGC 1 cut(s) 1782
Bpu14I TTCGAA 1 cut(s) 502
BpuEI CTTGAG 5 cut(s) 623, 892, 1330, 1422, 1899
Bsa29I ATCGAT 1 cut(s) 1844
BsaAI YACGTR 1 cut(s) 2224
BsaBI GATNNNNATC 1 cut(s) 2055
BsaI GGTCTC 2 cut(s) 45, 142
BsaJI CCNNGG 7 cut(s) 27, 80, 787, 883, 1485, 1641, 2256
BsaWI WCCGGW 3 cut(s) 1530, 2018, 2213
BsaXI ACNNNNNCTCC 6 cut(s) 8, 38, 1187, 1217, 2208, 2238
Bse1I ACTGG 4 cut(s) 649, 836, 2114, 2136
Bse3DI GCAATG 1 cut(s) 467
Bse8I GATNNNNATC 1 cut(s) 2055
BseAI TCCGGA 2 cut(s) 1530, 2213
BseBI CCWGG 2 cut(s) 789, 1600
BseCI ATCGAT 1 cut(s) 1844
BseDI CCNNGG 7 cut(s) 27, 80, 787, 883, 1485, 1641, 2256
BseGI GGATG 6 cut(s) 238, 277, 403, 1063, 1546, 1588
BseJI GATNNNNATC 1 cut(s) 2055
BseMI GCAATG 1 cut(s) 467
BseMII CTCAG 8 cut(s) 369, 504, 859, 1257, 1752, 1773, 1773, 2238
BseNI ACTGG 4 cut(s) 649, 836, 2114, 2136
BsePI GCGCGC 1 cut(s) 307
BseRI GAGGAG 6 cut(s) 423, 426, 429, 432, 453, 1433
BseXI GCAGC 6 cut(s) 195, 298, 877, 911, 1348, 1417
BseYI CCCAGC 1 cut(s) 935
Bsh1236I CGCG 5 cut(s) 9, 64, 102, 104, 309
BshFI GGCC 2 cut(s) 1118, 1812
BshVI ATCGAT 1 cut(s) 1844
BsiHKAI GWGCWC 1 cut(s) 846
BsiHKCI CYCGRG 1 cut(s) 1989
BsiSI CCGG 4 cut(s) 1531, 1809, 2019, 2214
BsmAI GTCTC 5 cut(s) 45, 142, 284, 1982, 2232
BsmI GAATGC 1 cut(s) 1258
BsnI GGCC 2 cut(s) 1118, 1812
Bso31I GGTCTC 2 cut(s) 45, 142
BsoBI CYCGRG 1 cut(s) 1989
Bsp119I TTCGAA 1 cut(s) 502
Bsp1286I GDGCHC 1 cut(s) 846
Bsp13I TCCGGA 2 cut(s) 1530, 2213
Bsp143I GATC 3 cut(s) 496, 2068, 2083
Bsp1720I GCTNAGC 1 cut(s) 1782
Bsp19I CCATGG 1 cut(s) 2256
Bsp68I TCGCGA 1 cut(s) 64
BspACI CCGC 8 cut(s) 104, 494, 1360, 1564, 2024, 2179, 2198, 2201
BspANI GGCC 2 cut(s) 1118, 1812
BspCNI CTCAG 8 cut(s) 370, 503, 858, 1258, 1751, 1772, 1774, 2239
BspDI ATCGAT 1 cut(s) 1844
BspEI TCCGGA 2 cut(s) 1530, 2213
BspFNI CGCG 5 cut(s) 9, 64, 102, 104, 309
BspLI GGNNCC 1 cut(s) 703
BspMI ACCTGC 1 cut(s) 1985
BspPI GGATC 1 cut(s) 504
BspT104I TTCGAA 1 cut(s) 502
BspTNI GGTCTC 2 cut(s) 45, 142
BsrBI CCGCTC 1 cut(s) 2024
BsrDI GCAATG 1 cut(s) 467
BsrI ACTGG 4 cut(s) 649, 836, 2114, 2136
BssECI CCNNGG 7 cut(s) 27, 80, 787, 883, 1485, 1641, 2256
BssHII GCGCGC 1 cut(s) 307
BssMI GATC 3 cut(s) 496, 2068, 2083
BssT1I CCWWGG 3 cut(s) 1485, 1641, 2256
Bst2UI CCWGG 2 cut(s) 789, 1600
Bst4CI ACNGT 5 cut(s) 568, 871, 1032, 2032, 2149
Bst6I CTCTTC 3 cut(s) 27, 282, 2283
BstBAI YACGTR 1 cut(s) 2224
BstBI TTCGAA 1 cut(s) 502
BstC8I GCNNGC 2 cut(s) 309, 2076
BstDSI CCRYGG 3 cut(s) 80, 883, 2256
BstF5I GGATG 6 cut(s) 238, 277, 403, 1063, 1546, 1588
BstFNI CGCG 5 cut(s) 9, 64, 102, 104, 309
BstH2I RGCGCY 1 cut(s) 1039
BstHHI GCGC 4 cut(s) 104, 309, 311, 1038
BstKTI GATC 3 cut(s) 499, 2071, 2086
BstMAI GTCTC 5 cut(s) 45, 142, 284, 1982, 2232
BstMBI GATC 3 cut(s) 496, 2068, 2083
BstMWI GCNNNNNNNGC 8 cut(s) 608, 710, 896, 899, 1124, 1141, 1439, 1453
BstNI CCWGG 2 cut(s) 789, 1600
BstNSI RCATGY 3 cut(s) 606, 1751, 1977
BstPAI GACNNNNGTC 1 cut(s) 789
BstSCI CCNGG 2 cut(s) 787, 1598
BstUI CGCG 5 cut(s) 9, 64, 102, 104, 309
BstV1I GCAGC 6 cut(s) 195, 298, 877, 911, 1348, 1417
BstV2I GAAGAC 2 cut(s) 101, 1903
BstX2I RGATCY 1 cut(s) 496
BstXI CCANNNNNNTGG 2 cut(s) 656, 2099
BstYI RGATCY 1 cut(s) 496
Bsu15I ATCGAT 1 cut(s) 1844
BsuI GTATCC 2 cut(s) 1697, 2020
BsuRI GGCC 2 cut(s) 1118, 1812
BsuTUI ATCGAT 1 cut(s) 1844
BtgI CCRYGG 3 cut(s) 80, 883, 2256
BtgZI GCGATG 4 cut(s) 176, 201, 1579, 1590
BtsCI GGATG 6 cut(s) 238, 277, 403, 1063, 1546, 1588
BtuMI TCGCGA 1 cut(s) 64
BveI ACCTGC 1 cut(s) 1985
Cac8I GCNNGC 2 cut(s) 309, 2076
CfoI GCGC 4 cut(s) 104, 309, 311, 1038
Cfr13I GGNCC 2 cut(s) 791, 1298
ClaI ATCGAT 1 cut(s) 1844
CseI GACGC 2 cut(s) 1124, 1490
Csp6I GTAC 5 cut(s) 519, 646, 872, 1022, 1911
CviQI GTAC 5 cut(s) 519, 646, 872, 1022, 1911
DpnI GATC 3 cut(s) 498, 2070, 2085
DpnII GATC 3 cut(s) 496, 2068, 2083
DraI TTTAAA 1 cut(s) 1320
DrdI GACNNNNNNGTC 1 cut(s) 1748
DseDI GACNNNNNNGTC 1 cut(s) 1748
EaeI YGGCCR 2 cut(s) 1116, 1810
Eam1104I CTCTTC 3 cut(s) 27, 282, 2283
EarI CTCTTC 3 cut(s) 27, 282, 2283
EciI GGCGGA 1 cut(s) 1579
Ecl136II GAGCTC 1 cut(s) 844
Eco130I CCWWGG 3 cut(s) 1485, 1641, 2256
Eco24I GRGCYC 1 cut(s) 846
Eco31I GGTCTC 2 cut(s) 45, 142
Eco32I GATATC 1 cut(s) 1855
Eco47I GGWCC 2 cut(s) 791, 1298
Eco53kI GAGCTC 1 cut(s) 844
Eco57I CTGAAG 3 cut(s) 570, 2100, 2110
Eco88I CYCGRG 1 cut(s) 1989
EcoICRI GAGCTC 1 cut(s) 844
EcoO109I RGGNCCY 1 cut(s) 1298
EcoRI GAATTC 2 cut(s) 919, 1474
EcoRII CCWGG 2 cut(s) 787, 1598
EcoRV GATATC 1 cut(s) 1855
EcoT14I CCWWGG 3 cut(s) 1485, 1641, 2256
EcoT22I ATGCAT 2 cut(s) 604, 1402
EcoT38I GRGCYC 1 cut(s) 846
ErhI CCWWGG 3 cut(s) 1485, 1641, 2256
FalI AAGNNNNNCTT 2 cut(s) 1431, 1463
FauI CCCGC 1 cut(s) 1353
FblI GTMKAC 1 cut(s) 1941
Fnu4HI GCNGC 8 cut(s) 105, 184, 312, 891, 900, 1337, 1431, 2199
FokI GGATG 6 cut(s) 245, 284, 410, 1070, 1533, 1595
FriOI GRGCYC 1 cut(s) 846
Fsp4HI GCNGC 8 cut(s) 105, 184, 312, 891, 900, 1337, 1431, 2199
FspBI CTAG 3 cut(s) 390, 2186, 2207
GlaI GCGC 4 cut(s) 103, 308, 310, 1037
GluI GCNGC 8 cut(s) 105, 184, 312, 891, 900, 1337, 1431, 2199
GsaI CCCAGC 1 cut(s) 939
GsuI CTGGAG 1 cut(s) 1060
HaeII RGCGCY 1 cut(s) 1039
HaeIII GGCC 2 cut(s) 1118, 1812
HapII CCGG 4 cut(s) 1531, 1809, 2019, 2214
HgaI GACGC 2 cut(s) 1124, 1490
HhaI GCGC 4 cut(s) 104, 309, 311, 1038
Hin6I GCGC 4 cut(s) 102, 307, 309, 1036
HinP1I GCGC 4 cut(s) 102, 307, 309, 1036
HincII GTYRAC 5 cut(s) 664, 1234, 1717, 1942, 1986
HindII GTYRAC 5 cut(s) 664, 1234, 1717, 1942, 1986
HindIII AAGCTT 1 cut(s) 1454
HinfI GANTC 9 cut(s) 85, 97, 112, 131, 221, 227, 617, 2210, 2266
HpaI GTTAAC 2 cut(s) 664, 1717
HpaII CCGG 4 cut(s) 1531, 1809, 2019, 2214
HphI GGTGA 3 cut(s) 203, 263, 2146
Hpy166II GTNNAC 9 cut(s) 664, 867, 998, 1234, 1717, 1942, 1986, 2000, 2221
Hpy188III TCNNGA 9 cut(s) 63, 571, 909, 1309, 1531, 2042, 2192, 2207, 2214
Hpy8I GTNNAC 9 cut(s) 664, 867, 998, 1234, 1717, 1942, 1986, 2000, 2221
Hpy99I CGWCG 6 cut(s) 20, 112, 127, 160, 865, 2149
HpyAV CCTTC 5 cut(s) 162, 426, 457, 692, 1803
HpyCH4III ACNGT 5 cut(s) 568, 871, 1032, 2032, 2149
HpyCH4IV ACGT 1 cut(s) 2223
HpyCH4V TGCA 9 cut(s) 472, 602, 1174, 1256, 1336, 1400, 1541, 1609, 1622
HpyF10VI GCNNNNNNNGC 8 cut(s) 608, 710, 896, 899, 1124, 1141, 1439, 1453
HpySE526I ACGT 1 cut(s) 2223
HspAI GCGC 4 cut(s) 102, 307, 309, 1036
Kpn2I TCCGGA 2 cut(s) 1530, 2213
KspAI GTTAAC 2 cut(s) 664, 1717
Kzo9I GATC 3 cut(s) 496, 2068, 2083
LmnI GCTCC 4 cut(s) 701, 887, 1041, 2021
Lsp1109I GCAGC 6 cut(s) 195, 298, 877, 911, 1348, 1417
LweI GCATC 6 cut(s) 294, 589, 1387, 1602, 1836, 2185
MaeI CTAG 3 cut(s) 390, 2186, 2207
MaeII ACGT 1 cut(s) 2223
MaeIII GTNAC 7 cut(s) 532, 577, 971, 1885, 1918, 2116, 2134
MalI GATC 3 cut(s) 498, 2070, 2085
MbiI CCGCTC 1 cut(s) 2024
MboI GATC 3 cut(s) 496, 2068, 2083
MflI RGATCY 1 cut(s) 496
MhlI GDGCHC 1 cut(s) 846
MlsI TGGCCA 1 cut(s) 1118
MluNI TGGCCA 1 cut(s) 1118
MlyI GAGTC 4 cut(s) 79, 91, 140, 2219
MmeI TCCRAC 3 cut(s) 140, 1173, 1751
Mox20I TGGCCA 1 cut(s) 1118
Mph1103I ATGCAT 2 cut(s) 604, 1402
MroI TCCGGA 2 cut(s) 1530, 2213
MscI TGGCCA 1 cut(s) 1118
MslI CAYNNNNRTG 1 cut(s) 2226
Msp20I TGGCCA 1 cut(s) 1118
MspA1I CMGCKG 2 cut(s) 494, 1360
MspI CCGG 4 cut(s) 1531, 1809, 2019, 2214
MspR9I CCNGG 2 cut(s) 789, 1600
Mva1269I GAATGC 1 cut(s) 1258
MvaI CCWGG 2 cut(s) 789, 1600
MvnI CGCG 5 cut(s) 9, 64, 102, 104, 309
MwoI GCNNNNNNNGC 8 cut(s) 608, 710, 896, 899, 1124, 1141, 1439, 1453
NcoI CCATGG 1 cut(s) 2256
NdeII GATC 3 cut(s) 496, 2068, 2083
NlaIV GGNNCC 1 cut(s) 703
NmuCI GTSAC 3 cut(s) 577, 2116, 2134
NruI TCGCGA 1 cut(s) 64
NsiI ATGCAT 2 cut(s) 604, 1402
NspI RCATGY 3 cut(s) 606, 1751, 1977
NspV TTCGAA 1 cut(s) 502
PaeR7I CTCGAG 1 cut(s) 1989
PaqCI CACCTGC 1 cut(s) 1985
PauI GCGCGC 1 cut(s) 307
PciI ACATGT 1 cut(s) 1747
PcsI WCGNNNNNNNCGW 3 cut(s) 24, 164, 2092
PctI GAATGC 1 cut(s) 1258
PfeI GAWTC 5 cut(s) 112, 221, 227, 617, 2266
PflFI GACNNNGTC 1 cut(s) 2004
PkrI GCNGC 8 cut(s) 106, 185, 313, 892, 901, 1338, 1432, 2200
PleI GAGTC 4 cut(s) 79, 91, 139, 2218
PpsI GAGTC 4 cut(s) 79, 91, 139, 2218
Ppu21I YACGTR 1 cut(s) 2224
PpuMI RGGWCCY 1 cut(s) 1298
PscI ACATGT 1 cut(s) 1747
PshAI GACNNNNGTC 1 cut(s) 789
PshBI ATTAAT 1 cut(s) 1376
Psp124BI GAGCTC 1 cut(s) 846
Psp5II RGGWCCY 1 cut(s) 1298
Psp6I CCWGG 2 cut(s) 787, 1598
PspFI CCCAGC 1 cut(s) 935
PspGI CCWGG 2 cut(s) 787, 1598
PspN4I GGNNCC 1 cut(s) 703
PspPI GGNCC 2 cut(s) 791, 1298
PspPPI RGGWCCY 1 cut(s) 1298
PspXI VCTCGAGB 1 cut(s) 1989
PsuI RGATCY 1 cut(s) 496
PsyI GACNNNGTC 1 cut(s) 2004
PteI GCGCGC 1 cut(s) 307
RruI TCGCGA 1 cut(s) 64
RsaI GTAC 5 cut(s) 520, 647, 873, 1023, 1912
RsaNI GTAC 5 cut(s) 519, 646, 872, 1022, 1911
RseI CAYNNNNRTG 1 cut(s) 2226
SacI GAGCTC 1 cut(s) 846
SalI GTCGAC 1 cut(s) 1940
SatI GCNGC 8 cut(s) 105, 184, 312, 891, 900, 1337, 1431, 2199
Sau3AI GATC 3 cut(s) 496, 2068, 2083
Sau96I GGNCC 2 cut(s) 791, 1298
ScaI AGTACT 2 cut(s) 1023, 1912
SchI GAGTC 4 cut(s) 79, 91, 140, 2219
ScrFI CCNGG 2 cut(s) 789, 1600
SduI GDGCHC 1 cut(s) 846
SfaNI GCATC 6 cut(s) 294, 589, 1387, 1602, 1836, 2185
Sfr274I CTCGAG 1 cut(s) 1989
SfuI TTCGAA 1 cut(s) 502
SinI GGWCC 2 cut(s) 791, 1298
SlaI CTCGAG 1 cut(s) 1989
SmiMI CAYNNNNRTG 1 cut(s) 2226
SmlI CTYRAG 6 cut(s) 638, 907, 1309, 1437, 1914, 1989
SmoI CTYRAG 6 cut(s) 638, 907, 1309, 1437, 1914, 1989
SpeI ACTAGT 1 cut(s) 2185
SsiI CCGC 8 cut(s) 104, 494, 1360, 1564, 2024, 2179, 2198, 2201
SspI AATATT 1 cut(s) 1827
SspMI CTAG 3 cut(s) 390, 2186, 2207
SstI GAGCTC 1 cut(s) 846
StyD4I CCNGG 2 cut(s) 787, 1598
StyI CCWWGG 3 cut(s) 1485, 1641, 2256
TaaI ACNGT 5 cut(s) 568, 871, 1032, 2032, 2149
TaiI ACGT 1 cut(s) 2226
TaqII GACCGA 1 cut(s) 1029
TatI WGTACW 3 cut(s) 871, 1021, 1910
TauI GCSGC 2 cut(s) 107, 2201
TfiI GAWTC 5 cut(s) 112, 221, 227, 617, 2266
TseFI GTSAC 3 cut(s) 577, 2116, 2134
TseI GCWGC 6 cut(s) 183, 311, 890, 899, 1336, 1430
Tsp45I GTSAC 3 cut(s) 577, 2116, 2134
TspGWI ACGGA 5 cut(s) 97, 849, 900, 1673, 2250
Tth111I GACNNNGTC 1 cut(s) 2004
VpaK11BI GGWCC 2 cut(s) 791, 1298
VspI ATTAAT 1 cut(s) 1376
XapI RAATTY 4 cut(s) 401, 919, 1474, 1506
XbaI TCTAGA 1 cut(s) 2206
XceI RCATGY 3 cut(s) 606, 1751, 1977
XhoI CTCGAG 1 cut(s) 1989
XmiI GTMKAC 1 cut(s) 1941
XspI CTAG 3 cut(s) 390, 2186, 2207
ZrmI AGTACT 2 cut(s) 1023, 1912
Zsp2I ATGCAT 2 cut(s) 604, 1402
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.