SWI SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD H box
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G02090 |
| fragaria_vesca | FvH4_4g36060 |
| malus_domestica | MD16G1009400.v1.1 |
| prunus_persica | Prupe.1G341200_v2.0.a1 Prupe.1G341200_v2.0.a1 |
| pyrus_communis | pycom16g00910 |
| rosa_chinensis | RchiOBHm_Chr4g0445681 |
| rosa_laevigata | RLG00000005717 |
| rosa_multiflora | Rmu_sc0003637.1_g000018 |
| rosa_roxburghii | Rroxscaffold_5G00386160 |
| rosa_rugosa | Rorug04G0364700 |
| rosa_samantha | Rh4AG425600 |
| rosa_wichuraiana | Rw4G036460 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 254, 404 |
| AatII | GACGTC | 3 cut(s) | 258, 408, 881 |
| Acc16I | TGCGCA | 1 cut(s) | 957 |
| AccB1I | GGYRCC | 1 cut(s) | 813 |
| AccI | GTMKAC | 1 cut(s) | 189 |
| AccII | CGCG | 7 cut(s) | 81, 150, 156, 292, 294, 853, 1078 |
| AclI | AACGTT | 1 cut(s) | 988 |
| AcoI | YGGCCR | 3 cut(s) | 151, 885, 2059 |
| AcuI | CTGAAG | 4 cut(s) | 528, 759, 1052, 1778 |
| AcyI | GRCGYC | 4 cut(s) | 174, 255, 405, 878 |
| AfaI | GTAC | 4 cut(s) | 1213, 1597, 1870, 2104 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 2085 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 520 |
| AhlI | ACTAGT | 1 cut(s) | 1513 |
| AjnI | CCWGG | 3 cut(s) | 745, 1556, 1959 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1235, 1267 |
| Alw21I | GWGCWC | 1 cut(s) | 1402 |
| Alw26I | GTCTC | 2 cut(s) | 1264, 1731 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2204 |
| Ama87I | CYCGRG | 2 cut(s) | 105, 2165 |
| AoxI | GGCC | 5 cut(s) | 108, 151, 885, 1957, 2059 |
| ApaI | GGGCCC | 1 cut(s) | 112 |
| ApeKI | GCWGC | 6 cut(s) | 9, 276, 848, 1388, 2156, 2198 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 164, 196 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1628, 1746 |
| AspLEI | GCGC | 9 cut(s) | 9, 150, 158, 294, 434, 853, 958, 1078, 2198 |
| AspS9I | GGNCC | 6 cut(s) | 52, 108, 109, 742, 749, 1256 |
| AsuC2I | CCSGG | 3 cut(s) | 106, 107, 284 |
| AsuHPI | GGTGA | 2 cut(s) | 298, 1640 |
| AvaI | CYCGRG | 2 cut(s) | 105, 2165 |
| AvaII | GGWCC | 4 cut(s) | 52, 742, 749, 1256 |
| BaeGI | GKGCMC | 2 cut(s) | 112, 818 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1977, 2010 |
| BalI | TGGCCA | 2 cut(s) | 887, 2061 |
| BanI | GGYRCC | 1 cut(s) | 813 |
| BanII | GRGCYC | 2 cut(s) | 112, 1402 |
| BauI | CACGAG | 1 cut(s) | 1395 |
| BbsI | GAAGAC | 3 cut(s) | 698, 1685, 2216 |
| Bbv12I | GWGCWC | 1 cut(s) | 1402 |
| BbvI | GCAGC | 6 cut(s) | 21, 288, 835, 1400, 2143, 2210 |
| BccI | CCATC | 3 cut(s) | 673, 1856, 2176 |
| BceAI | ACGGC | 3 cut(s) | 217, 484, 504 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 2221 |
| BciT130I | CCWGG | 3 cut(s) | 747, 1558, 1961 |
| BclI | TGATCA | 1 cut(s) | 1230 |
| BcnI | CCSGG | 3 cut(s) | 106, 107, 284 |
| BcoDI | GTCTC | 2 cut(s) | 1264, 1731 |
| BcuI | ACTAGT | 1 cut(s) | 1513 |
| BfaI | CTAG | 4 cut(s) | 686, 1151, 1514, 2090 |
| BfmI | CTRYAG | 3 cut(s) | 1048, 1215, 1989 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 668 |
| BglII | AGATCT | 1 cut(s) | 1168 |
| BmcAI | AGTACT | 2 cut(s) | 1213, 1870 |
| Bme1390I | CCNGG | 6 cut(s) | 106, 107, 284, 747, 1558, 1961 |
| Bme18I | GGWCC | 4 cut(s) | 52, 742, 749, 1256 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 520 |
| BmeT110I | CYCGRG | 2 cut(s) | 105, 2165 |
| BmgT120I | GGNCC | 6 cut(s) | 52, 108, 109, 742, 749, 1256 |
| BmiI | GGNNCC | 8 cut(s) | 110, 111, 205, 661, 744, 751, 815, 1257 |
| BmrFI | CCNGG | 6 cut(s) | 106, 107, 284, 747, 1558, 1961 |
| BmrI | ACTGGG | 1 cut(s) | 799 |
| BmsI | GCATC | 5 cut(s) | 708, 1345, 1780, 2143, 2210 |
| BmuI | ACTGGG | 1 cut(s) | 799 |
| BoxI | GACNNNNGTC | 1 cut(s) | 747 |
| BpiI | GAAGAC | 3 cut(s) | 698, 1685, 2216 |
| BpmI | CTGGAG | 3 cut(s) | 368, 818, 1974 |
| BpuEI | CTTGAG | 1 cut(s) | 581 |
| BpuMI | CCSGG | 3 cut(s) | 106, 107, 284 |
| BsaHI | GRCGYC | 4 cut(s) | 174, 255, 405, 878 |
| BsaJI | CCNNGG | 6 cut(s) | 104, 105, 745, 1454, 1960, 2097 |
| BsaWI | WCCGGW | 1 cut(s) | 1976 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 14, 44, 44, 47, 74, 77, 335, 365 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 2085 |
| Bse118I | RCCGGY | 2 cut(s) | 121, 1650 |
| Bse1I | ACTGG | 4 cut(s) | 574, 794, 835, 1792 |
| BseBI | CCWGG | 3 cut(s) | 747, 1558, 1961 |
| BseDI | CCNNGG | 6 cut(s) | 104, 105, 745, 1454, 1960, 2097 |
| BseGI | GGATG | 9 cut(s) | 550, 1021, 1192, 1245, 1504, 1546, 1567, 1694, 1837 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 2085 |
| BseMII | CTCAG | 5 cut(s) | 554, 1173, 1742, 1886, 2196 |
| BseNI | ACTGG | 4 cut(s) | 574, 794, 835, 1792 |
| BseSI | GKGCMC | 2 cut(s) | 112, 818 |
| BseX3I | CGGCCG | 1 cut(s) | 151 |
| BseXI | GCAGC | 6 cut(s) | 21, 288, 835, 1400, 2143, 2210 |
| BseYI | CCCAGC | 2 cut(s) | 1766, 2242 |
| BsgI | GTGCAG | 1 cut(s) | 1407 |
| Bsh1236I | CGCG | 7 cut(s) | 81, 150, 156, 292, 294, 853, 1078 |
| Bsh1285I | CGRYCG | 1 cut(s) | 154 |
| BshFI | GGCC | 5 cut(s) | 110, 153, 887, 1959, 2061 |
| BshNI | GGYRCC | 1 cut(s) | 813 |
| BsiEI | CGRYCG | 1 cut(s) | 154 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1402 |
| BsiHKCI | CYCGRG | 2 cut(s) | 105, 2165 |
| BsiSI | CCGG | 5 cut(s) | 106, 122, 284, 1651, 1977 |
| BslFI | GGGAC | 4 cut(s) | 410, 735, 1269, 1289 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 2085 |
| BsmAI | GTCTC | 2 cut(s) | 1264, 1731 |
| BsmBI | CGTCTC | 1 cut(s) | 1264 |
| BsmFI | GGGAC | 4 cut(s) | 410, 735, 1269, 1289 |
| BsmI | GAATGC | 1 cut(s) | 903 |
| BsnI | GGCC | 5 cut(s) | 110, 153, 887, 1959, 2061 |
| BsoBI | CYCGRG | 2 cut(s) | 105, 2165 |
| Bsp120I | GGGCCC | 1 cut(s) | 108 |
| Bsp1286I | GDGCHC | 3 cut(s) | 112, 818, 1402 |
| Bsp143I | GATC | 7 cut(s) | 496, 970, 1168, 1230, 1494, 2026, 2041 |
| BspANI | GGCC | 5 cut(s) | 110, 153, 887, 1959, 2061 |
| BspCNI | CTCAG | 5 cut(s) | 553, 1174, 1741, 1885, 2197 |
| BspFNI | CGCG | 7 cut(s) | 81, 150, 156, 292, 294, 853, 1078 |
| BspLI | GGNNCC | 8 cut(s) | 110, 111, 205, 661, 744, 751, 815, 1257 |
| BspMAI | CTGCAG | 1 cut(s) | 1219 |
| BspT107I | GGYRCC | 1 cut(s) | 813 |
| BsrFI | RCCGGY | 2 cut(s) | 121, 1650 |
| BsrI | ACTGG | 4 cut(s) | 574, 794, 835, 1792 |
| BssAI | RCCGGY | 2 cut(s) | 121, 1650 |
| BssECI | CCNNGG | 6 cut(s) | 104, 105, 745, 1454, 1960, 2097 |
| BssMI | GATC | 7 cut(s) | 496, 970, 1168, 1230, 1494, 2026, 2041 |
| BssNI | GRCGYC | 4 cut(s) | 174, 255, 405, 878 |
| BssSI | CACGAG | 1 cut(s) | 1395 |
| BssT1I | CCWWGG | 1 cut(s) | 2097 |
| Bst2BI | CACGAG | 1 cut(s) | 1395 |
| Bst2UI | CCWGG | 3 cut(s) | 747, 1558, 1961 |
| Bst4CI | ACNGT | 5 cut(s) | 953, 1436, 1532, 1990, 2107 |
| BstACI | GRCGYC | 4 cut(s) | 174, 255, 405, 878 |
| BstC8I | GCNNGC | 4 cut(s) | 123, 1764, 1933, 1937 |
| BstDEI | CTNAG | 6 cut(s) | 540, 1182, 1728, 1872, 2176, 2205 |
| BstF5I | GGATG | 9 cut(s) | 550, 1021, 1192, 1245, 1504, 1546, 1567, 1694, 1837 |
| BstFNI | CGCG | 7 cut(s) | 81, 150, 156, 292, 294, 853, 1078 |
| BstHHI | GCGC | 9 cut(s) | 9, 150, 158, 294, 434, 853, 958, 1078, 2198 |
| BstKTI | GATC | 7 cut(s) | 499, 973, 1171, 1233, 1497, 2029, 2044 |
| BstMAI | GTCTC | 2 cut(s) | 1264, 1731 |
| BstMBI | GATC | 7 cut(s) | 496, 970, 1168, 1230, 1494, 2026, 2041 |
| BstMCI | CGRYCG | 1 cut(s) | 154 |
| BstNI | CCWGG | 3 cut(s) | 747, 1558, 1961 |
| BstNSI | RCATGY | 1 cut(s) | 1935 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 747 |
| BstSCI | CCNGG | 6 cut(s) | 104, 105, 282, 745, 1556, 1959 |
| BstSFI | CTRYAG | 3 cut(s) | 1048, 1215, 1989 |
| BstSLI | GKGCMC | 2 cut(s) | 112, 818 |
| BstUI | CGCG | 7 cut(s) | 81, 150, 156, 292, 294, 853, 1078 |
| BstV1I | GCAGC | 6 cut(s) | 21, 288, 835, 1400, 2143, 2210 |
| BstV2I | GAAGAC | 3 cut(s) | 698, 1685, 2216 |
| BstX2I | RGATCY | 1 cut(s) | 1168 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 614 |
| BstYI | RGATCY | 1 cut(s) | 1168 |
| BstZI | CGGCCG | 1 cut(s) | 151 |
| BsuRI | GGCC | 5 cut(s) | 110, 153, 887, 1959, 2061 |
| BtgZI | GCGATG | 1 cut(s) | 2036 |
| BtsCI | GGATG | 9 cut(s) | 550, 1021, 1192, 1245, 1504, 1546, 1567, 1694, 1837 |
| BtsIMutI | CAGTG | 4 cut(s) | 958, 1537, 1674, 1799 |
| Cac8I | GCNNGC | 4 cut(s) | 123, 1764, 1933, 1937 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2204 |
| CciNI | GCGGCCGC | 1 cut(s) | 151 |
| CfoI | GCGC | 9 cut(s) | 9, 150, 158, 294, 434, 853, 958, 1078, 2198 |
| Cfr10I | RCCGGY | 2 cut(s) | 121, 1650 |
| Cfr13I | GGNCC | 6 cut(s) | 52, 108, 109, 742, 749, 1256 |
| Cfr9I | CCCGGG | 1 cut(s) | 105 |
| CseI | GACGC | 5 cut(s) | 70, 182, 298, 524, 1082 |
| Csp6I | GTAC | 4 cut(s) | 1212, 1596, 1869, 2103 |
| CviAII | CATG | 4 cut(s) | 1025, 1133, 1336, 1932 |
| CviQI | GTAC | 4 cut(s) | 1212, 1596, 1869, 2103 |
| DdeI | CTNAG | 6 cut(s) | 540, 1182, 1728, 1872, 2176, 2205 |
| DpnI | GATC | 7 cut(s) | 498, 972, 1170, 1232, 1496, 2028, 2043 |
| DpnII | GATC | 7 cut(s) | 496, 970, 1168, 1230, 1494, 2026, 2041 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 254, 404 |
| DriI | GACNNNNNGTC | 1 cut(s) | 520 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 254, 404 |
| EaeI | YGGCCR | 3 cut(s) | 151, 885, 2059 |
| EagI | CGGCCG | 1 cut(s) | 151 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 520 |
| EciI | GGCGGA | 4 cut(s) | 154, 356, 398, 461 |
| Ecl136II | GAGCTC | 1 cut(s) | 1400 |
| EclXI | CGGCCG | 1 cut(s) | 151 |
| Eco130I | CCWWGG | 1 cut(s) | 2097 |
| Eco24I | GRGCYC | 2 cut(s) | 112, 1402 |
| Eco32I | GATATC | 2 cut(s) | 1672, 1813 |
| Eco47I | GGWCC | 4 cut(s) | 52, 742, 749, 1256 |
| Eco52I | CGGCCG | 1 cut(s) | 151 |
| Eco53kI | GAGCTC | 1 cut(s) | 1400 |
| Eco57I | CTGAAG | 4 cut(s) | 528, 759, 1052, 1778 |
| Eco88I | CYCGRG | 2 cut(s) | 105, 2165 |
| EcoICRI | GAGCTC | 1 cut(s) | 1400 |
| EcoO109I | RGGNCCY | 3 cut(s) | 109, 742, 749 |
| EcoRII | CCWGG | 3 cut(s) | 745, 1556, 1959 |
| EcoRV | GATATC | 2 cut(s) | 1672, 1813 |
| EcoT14I | CCWWGG | 1 cut(s) | 2097 |
| EcoT38I | GRGCYC | 2 cut(s) | 112, 1402 |
| ErhI | CCWWGG | 1 cut(s) | 2097 |
| Esp3I | CGTCTC | 1 cut(s) | 1264 |
| FaeI | CATG | 4 cut(s) | 1028, 1136, 1339, 1935 |
| FaqI | GGGAC | 4 cut(s) | 410, 735, 1269, 1289 |
| FatI | CATG | 4 cut(s) | 1024, 1132, 1335, 1931 |
| FauI | CCCGC | 3 cut(s) | 86, 126, 450 |
| FbaI | TGATCA | 1 cut(s) | 1230 |
| FblI | GTMKAC | 1 cut(s) | 189 |
| FokI | GGATG | 9 cut(s) | 557, 1028, 1199, 1252, 1491, 1553, 1554, 1701, 1844 |
| FriOI | GRGCYC | 2 cut(s) | 112, 1402 |
| FspBI | CTAG | 4 cut(s) | 686, 1151, 1514, 2090 |
| FspI | TGCGCA | 1 cut(s) | 957 |
| GlaI | GCGC | 9 cut(s) | 8, 149, 157, 293, 433, 852, 957, 1077, 2197 |
| GsaI | CCCAGC | 2 cut(s) | 1770, 2246 |
| GsuI | CTGGAG | 3 cut(s) | 368, 818, 1974 |
| HaeIII | GGCC | 5 cut(s) | 110, 153, 887, 1959, 2061 |
| HapII | CCGG | 5 cut(s) | 106, 122, 284, 1651, 1977 |
| HgaI | GACGC | 5 cut(s) | 70, 182, 298, 524, 1082 |
| HhaI | GCGC | 9 cut(s) | 9, 150, 158, 294, 434, 853, 958, 1078, 2198 |
| Hin1I | GRCGYC | 4 cut(s) | 174, 255, 405, 878 |
| Hin1II | CATG | 4 cut(s) | 1028, 1136, 1339, 1935 |
| Hin6I | GCGC | 9 cut(s) | 7, 148, 156, 292, 432, 851, 956, 1076, 2196 |
| HinP1I | GCGC | 9 cut(s) | 7, 148, 156, 292, 432, 851, 956, 1076, 2196 |
| HincII | GTYRAC | 4 cut(s) | 190, 622, 876, 1192 |
| HindII | GTYRAC | 4 cut(s) | 190, 622, 876, 1192 |
| HinfI | GANTC | 4 cut(s) | 131, 350, 979, 2168 |
| HpaI | GTTAAC | 1 cut(s) | 622 |
| HpaII | CCGG | 5 cut(s) | 106, 122, 284, 1651, 1977 |
| HphI | GGTGA | 2 cut(s) | 298, 1640 |
| Hpy166II | GTNNAC | 8 cut(s) | 190, 514, 622, 876, 1192, 1797, 1944, 2122 |
| Hpy188III | TCNNGA | 5 cut(s) | 412, 542, 867, 1395, 1697 |
| Hpy8I | GTNNAC | 8 cut(s) | 190, 514, 622, 876, 1192, 1797, 1944, 2122 |
| HpyAV | CCTTC | 7 cut(s) | 76, 145, 291, 640, 828, 1027, 2186 |
| HpyCH4III | ACNGT | 5 cut(s) | 953, 1436, 1532, 1990, 2107 |
| HpyCH4IV | ACGT | 5 cut(s) | 255, 405, 878, 988, 1273 |
| HpyCH4V | TGCA | 9 cut(s) | 424, 1085, 1217, 1294, 1388, 1409, 1580, 1721, 1931 |
| HpyF3I | CTNAG | 6 cut(s) | 540, 1182, 1728, 1872, 2176, 2205 |
| HpySE526I | ACGT | 5 cut(s) | 255, 405, 878, 988, 1273 |
| Hsp92I | GRCGYC | 4 cut(s) | 174, 255, 405, 878 |
| Hsp92II | CATG | 4 cut(s) | 1028, 1136, 1339, 1935 |
| HspAI | GCGC | 9 cut(s) | 7, 148, 156, 292, 432, 851, 956, 1076, 2196 |
| KroI | GCCGGC | 1 cut(s) | 121 |
| KroNI | GCCGGC | 1 cut(s) | 123 |
| Ksp22I | TGATCA | 1 cut(s) | 1230 |
| KspAI | GTTAAC | 1 cut(s) | 622 |
| Kzo9I | GATC | 7 cut(s) | 496, 970, 1168, 1230, 1494, 2026, 2041 |
| LmnI | GCTCC | 5 cut(s) | 209, 343, 460, 659, 1979 |
| Lsp1109I | GCAGC | 6 cut(s) | 21, 288, 835, 1400, 2143, 2210 |
| LweI | GCATC | 5 cut(s) | 708, 1345, 1780, 2143, 2210 |
| MaeI | CTAG | 4 cut(s) | 686, 1151, 1514, 2090 |
| MaeII | ACGT | 5 cut(s) | 255, 405, 878, 988, 1273 |
| MaeIII | GTNAC | 8 cut(s) | 286, 535, 706, 1563, 1843, 1876, 2074, 2092 |
| MalI | GATC | 7 cut(s) | 498, 972, 1170, 1232, 1496, 2028, 2043 |
| MboI | GATC | 7 cut(s) | 496, 970, 1168, 1230, 1494, 2026, 2041 |
| MboII | GAAGA | 9 cut(s) | 620, 623, 703, 1069, 1685, 1715, 1739, 2051, 2221 |
| MflI | RGATCY | 1 cut(s) | 1168 |
| MhlI | GDGCHC | 3 cut(s) | 112, 818, 1402 |
| MlsI | TGGCCA | 2 cut(s) | 887, 2061 |
| MluCI | AATT | 1 cut(s) | 2022 |
| MluNI | TGGCCA | 2 cut(s) | 887, 2061 |
| MlyI | GAGTC | 3 cut(s) | 140, 359, 2177 |
| MmeI | TCCRAC | 4 cut(s) | 57, 231, 977, 1217 |
| Mox20I | TGGCCA | 2 cut(s) | 887, 2061 |
| MroNI | GCCGGC | 1 cut(s) | 121 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1628, 1746 |
| MscI | TGGCCA | 2 cut(s) | 887, 2061 |
| MseI | TTAA | 5 cut(s) | 552, 621, 804, 1196, 1208 |
| Msp20I | TGGCCA | 2 cut(s) | 887, 2061 |
| MspA1I | CMGCKG | 1 cut(s) | 610 |
| MspI | CCGG | 5 cut(s) | 106, 122, 284, 1651, 1977 |
| MspR9I | CCNGG | 6 cut(s) | 106, 107, 284, 747, 1558, 1961 |
| Mva1269I | GAATGC | 1 cut(s) | 903 |
| MvaI | CCWGG | 3 cut(s) | 747, 1558, 1961 |
| MvnI | CGCG | 7 cut(s) | 81, 150, 156, 292, 294, 853, 1078 |
| NaeI | GCCGGC | 1 cut(s) | 123 |
| NciI | CCSGG | 3 cut(s) | 106, 107, 284 |
| NdeII | GATC | 7 cut(s) | 496, 970, 1168, 1230, 1494, 2026, 2041 |
| NgoMIV | GCCGGC | 1 cut(s) | 121 |
| NlaIII | CATG | 4 cut(s) | 1028, 1136, 1339, 1935 |
| NlaIV | GGNNCC | 8 cut(s) | 110, 111, 205, 661, 744, 751, 815, 1257 |
| NmeAIII | GCCGAG | 2 cut(s) | 422, 1435 |
| NmuCI | GTSAC | 3 cut(s) | 286, 535, 2092 |
| NotI | GCGGCCGC | 1 cut(s) | 151 |
| NsbI | TGCGCA | 1 cut(s) | 957 |
| NspI | RCATGY | 1 cut(s) | 1935 |
| PaeI | GCATGC | 1 cut(s) | 1935 |
| PaeR7I | CTCGAG | 1 cut(s) | 2165 |
| PctI | GAATGC | 1 cut(s) | 903 |
| PdiI | GCCGGC | 1 cut(s) | 123 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1628, 1746 |
| PfeI | GAWTC | 1 cut(s) | 979 |
| PflFI | GACNNNGTC | 2 cut(s) | 254, 407 |
| PleI | GAGTC | 3 cut(s) | 139, 358, 2176 |
| PpsI | GAGTC | 3 cut(s) | 139, 358, 2176 |
| PpuMI | RGGWCCY | 2 cut(s) | 742, 749 |
| PshAI | GACNNNNGTC | 1 cut(s) | 747 |
| Psp124BI | GAGCTC | 1 cut(s) | 1402 |
| Psp1406I | AACGTT | 1 cut(s) | 988 |
| Psp5II | RGGWCCY | 2 cut(s) | 742, 749 |
| Psp6I | CCWGG | 3 cut(s) | 745, 1556, 1959 |
| PspFI | CCCAGC | 2 cut(s) | 1766, 2242 |
| PspGI | CCWGG | 3 cut(s) | 745, 1556, 1959 |
| PspN4I | GGNNCC | 8 cut(s) | 110, 111, 205, 661, 744, 751, 815, 1257 |
| PspOMI | GGGCCC | 1 cut(s) | 108 |
| PspPI | GGNCC | 6 cut(s) | 52, 108, 109, 742, 749, 1256 |
| PspPPI | RGGWCCY | 2 cut(s) | 742, 749 |
| PspXI | VCTCGAGB | 1 cut(s) | 2165 |
| PstI | CTGCAG | 1 cut(s) | 1219 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2204 |
| PsuI | RGATCY | 1 cut(s) | 1168 |
| PsyI | GACNNNGTC | 2 cut(s) | 254, 407 |
| PvuII | CAGCTG | 1 cut(s) | 610 |
| RsaI | GTAC | 4 cut(s) | 1213, 1597, 1870, 2104 |
| RsaNI | GTAC | 4 cut(s) | 1212, 1596, 1869, 2103 |
| SacI | GAGCTC | 1 cut(s) | 1402 |
| SalI | GTCGAC | 1 cut(s) | 188 |
| SaqAI | TTAA | 5 cut(s) | 552, 621, 804, 1196, 1208 |
| Sau3AI | GATC | 7 cut(s) | 496, 970, 1168, 1230, 1494, 2026, 2041 |
| Sau96I | GGNCC | 6 cut(s) | 52, 108, 109, 742, 749, 1256 |
| ScaI | AGTACT | 2 cut(s) | 1213, 1870 |
| SchI | GAGTC | 3 cut(s) | 140, 359, 2177 |
| ScrFI | CCNGG | 6 cut(s) | 106, 107, 284, 747, 1558, 1961 |
| SduI | GDGCHC | 3 cut(s) | 112, 818, 1402 |
| SfaNI | GCATC | 5 cut(s) | 708, 1345, 1780, 2143, 2210 |
| SfcI | CTRYAG | 3 cut(s) | 1048, 1215, 1989 |
| Sfr274I | CTCGAG | 1 cut(s) | 2165 |
| SinI | GGWCC | 4 cut(s) | 52, 742, 749, 1256 |
| SlaI | CTCGAG | 1 cut(s) | 2165 |
| SmaI | CCCGGG | 1 cut(s) | 107 |
| SmlI | CTYRAG | 2 cut(s) | 596, 2165 |
| SmoI | CTYRAG | 2 cut(s) | 596, 2165 |
| SpeI | ACTAGT | 1 cut(s) | 1513 |
| SphI | GCATGC | 1 cut(s) | 1935 |
| Sse9I | AATT | 1 cut(s) | 2022 |
| SspMI | CTAG | 4 cut(s) | 686, 1151, 1514, 2090 |
| SstI | GAGCTC | 1 cut(s) | 1402 |
| StyD4I | CCNGG | 6 cut(s) | 104, 105, 282, 745, 1556, 1959 |
| StyI | CCWWGG | 1 cut(s) | 2097 |
| TaaI | ACNGT | 5 cut(s) | 953, 1436, 1532, 1990, 2107 |
| TaiI | ACGT | 5 cut(s) | 258, 408, 881, 991, 1276 |
| TasI | AATT | 1 cut(s) | 2022 |
| TatI | WGTACW | 3 cut(s) | 1211, 1595, 1868 |
| TauI | GCSGC | 7 cut(s) | 153, 156, 282, 482, 485, 904, 1462 |
| TfiI | GAWTC | 1 cut(s) | 979 |
| Tru1I | TTAA | 5 cut(s) | 552, 621, 804, 1196, 1208 |
| Tru9I | TTAA | 5 cut(s) | 552, 621, 804, 1196, 1208 |
| TscAI | CASTG | 4 cut(s) | 958, 1537, 1681, 1799 |
| TseFI | GTSAC | 3 cut(s) | 286, 535, 2092 |
| TseI | GCWGC | 6 cut(s) | 9, 276, 848, 1388, 2156, 2198 |
| Tsp45I | GTSAC | 3 cut(s) | 286, 535, 2092 |
| TspDTI | ATGAA | 6 cut(s) | 17, 1256, 1637, 1716, 2127, 2205 |
| TspGWI | ACGGA | 1 cut(s) | 1238 |
| TspMI | CCCGGG | 1 cut(s) | 105 |
| TspRI | CASTG | 4 cut(s) | 958, 1537, 1681, 1799 |
| Tth111I | GACNNNGTC | 2 cut(s) | 254, 407 |
| VpaK11BI | GGWCC | 4 cut(s) | 52, 742, 749, 1256 |
| XceI | RCATGY | 1 cut(s) | 1935 |
| XhoI | CTCGAG | 1 cut(s) | 2165 |
| XmaI | CCCGGG | 1 cut(s) | 105 |
| XmiI | GTMKAC | 1 cut(s) | 189 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1628, 1746 |
| XspI | CTAG | 4 cut(s) | 686, 1151, 1514, 2090 |
| ZraI | GACGTC | 3 cut(s) | 256, 406, 879 |
| ZrmI | AGTACT | 2 cut(s) | 1213, 1870 |