SWI SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD H box
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G02090 |
| fragaria_vesca | FvH4_4g36060 |
| malus_domestica | MD16G1009400.v1.1 |
| prunus_persica | Prupe.1G341200_v2.0.a1 Prupe.1G341200_v2.0.a1 |
| pyrus_communis | pycom16g00910 |
| rosa_chinensis | RchiOBHm_Chr4g0445681 |
| rosa_laevigata | RLG00000005717 |
| rosa_multiflora | Rmu_sc0003637.1_g000018 |
| rosa_roxburghii | Rroxscaffold_5G00386160 |
| rosa_rugosa | Rorug04G0364700 |
| rosa_samantha | Rh4AG425600 |
| rosa_wichuraiana | Rw4G036460 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 4 cut(s) | 200, 233, 236, 374 |
| AatII | GACGTC | 3 cut(s) | 237, 378, 1769 |
| AccB1I | GGYRCC | 2 cut(s) | 448, 780 |
| AccI | GTMKAC | 1 cut(s) | 326 |
| AccII | CGCG | 3 cut(s) | 78, 265, 820 |
| AciI | CCGC | 9 cut(s) | 76, 107, 250, 314, 362, 416, 869, 1426, 2124 |
| AclI | AACGTT | 1 cut(s) | 955 |
| AclWI | GGATC | 1 cut(s) | 2016 |
| AcoI | YGGCCR | 4 cut(s) | 254, 636, 852, 2026 |
| AcuI | CTGAAG | 5 cut(s) | 104, 495, 726, 1019, 1745 |
| AcyI | GRCGYC | 5 cut(s) | 98, 104, 234, 375, 1766 |
| AfaI | GTAC | 3 cut(s) | 1564, 1837, 2071 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 256, 495, 2052 |
| AflII | CTTAAG | 1 cut(s) | 770 |
| AflIII | ACRYGT | 1 cut(s) | 263 |
| AhlI | ACTAGT | 1 cut(s) | 1480 |
| AjiI | CACGTC | 1 cut(s) | 1801 |
| AjnI | CCWGG | 2 cut(s) | 1523, 1926 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1202, 1234 |
| Alw21I | GWGCWC | 4 cut(s) | 54, 435, 925, 1369 |
| Alw26I | GTCTC | 3 cut(s) | 151, 1231, 1698 |
| Alw44I | GTGCAC | 1 cut(s) | 921 |
| AlwI | GGATC | 1 cut(s) | 2016 |
| Ama87I | CYCGRG | 2 cut(s) | 712, 2132 |
| AoxI | GGCC | 7 cut(s) | 254, 636, 669, 852, 1924, 2001, 2026 |
| ApaLI | GTGCAC | 1 cut(s) | 921 |
| ApeKI | GCWGC | 4 cut(s) | 9, 815, 1181, 1355 |
| AseI | ATTAAT | 1 cut(s) | 519 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1713 |
| AspLEI | GCGC | 4 cut(s) | 9, 141, 404, 820 |
| AspS9I | GGNCC | 4 cut(s) | 247, 716, 1223, 1924 |
| AsuC2I | CCSGG | 2 cut(s) | 713, 714 |
| AsuHPI | GGTGA | 1 cut(s) | 271 |
| AsuII | TTCGAA | 1 cut(s) | 24 |
| AvaI | CYCGRG | 2 cut(s) | 712, 2132 |
| AvaII | GGWCC | 3 cut(s) | 247, 716, 1223 |
| BaeGI | GKGCMC | 2 cut(s) | 785, 925 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1944, 1977 |
| BalI | TGGCCA | 2 cut(s) | 854, 2028 |
| BanI | GGYRCC | 2 cut(s) | 448, 780 |
| BanII | GRGCYC | 2 cut(s) | 435, 1369 |
| BauI | CACGAG | 1 cut(s) | 1362 |
| BbsI | GAAGAC | 3 cut(s) | 665, 1652, 2183 |
| Bbv12I | GWGCWC | 4 cut(s) | 54, 435, 925, 1369 |
| BbvI | GCAGC | 4 cut(s) | 21, 802, 1168, 1367 |
| BccI | CCATC | 5 cut(s) | 640, 793, 1479, 1823, 2143 |
| BceAI | ACGGC | 2 cut(s) | 471, 656 |
| BciT130I | CCWGG | 2 cut(s) | 1525, 1928 |
| BcnI | CCSGG | 2 cut(s) | 713, 714 |
| BcoDI | GTCTC | 3 cut(s) | 151, 1231, 1698 |
| BcuI | ACTAGT | 1 cut(s) | 1480 |
| BfaI | CTAG | 3 cut(s) | 653, 1481, 2057 |
| BfmI | CTRYAG | 2 cut(s) | 1015, 1956 |
| BfoI | RGCGCY | 1 cut(s) | 142 |
| BfrI | CTTAAG | 1 cut(s) | 770 |
| BglII | AGATCT | 1 cut(s) | 1135 |
| BisI | GCNGC | 8 cut(s) | 10, 107, 816, 869, 1182, 1356, 1427, 2124 |
| BlsI | GCNGC | 8 cut(s) | 11, 108, 817, 870, 1183, 1357, 1428, 2125 |
| BmcAI | AGTACT | 1 cut(s) | 1837 |
| Bme1390I | CCNGG | 4 cut(s) | 713, 714, 1525, 1928 |
| Bme18I | GGWCC | 3 cut(s) | 247, 716, 1223 |
| BmeT110I | CYCGRG | 2 cut(s) | 712, 2132 |
| BmgBI | CACGTC | 1 cut(s) | 1801 |
| BmgT120I | GGNCC | 4 cut(s) | 247, 716, 1223, 1924 |
| BmiI | GGNNCC | 6 cut(s) | 450, 717, 718, 782, 1224, 1925 |
| BmrFI | CCNGG | 4 cut(s) | 713, 714, 1525, 1928 |
| BmrI | ACTGGG | 2 cut(s) | 766, 1743 |
| BmsI | GCATC | 5 cut(s) | 675, 1312, 1668, 1747, 2110 |
| BmuI | ACTGGG | 2 cut(s) | 766, 1743 |
| BoxI | GACNNNNGTC | 2 cut(s) | 714, 1862 |
| BpiI | GAAGAC | 3 cut(s) | 665, 1652, 2183 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 38, 70, 41, 73, 830, 862 |
| BpmI | CTGGAG | 3 cut(s) | 785, 1139, 1965 |
| Bpu14I | TTCGAA | 1 cut(s) | 24 |
| BpuEI | CTTGAG | 1 cut(s) | 548 |
| BpuMI | CCSGG | 2 cut(s) | 713, 714 |
| BsaHI | GRCGYC | 5 cut(s) | 98, 104, 234, 375, 1766 |
| BsaJI | CCNNGG | 5 cut(s) | 436, 712, 1421, 1927, 2004 |
| BsaWI | WCCGGW | 1 cut(s) | 132 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 44, 74, 143, 173, 308, 338 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 256, 495, 2052 |
| Bse118I | RCCGGY | 4 cut(s) | 109, 252, 256, 1617 |
| Bse1I | ACTGG | 5 cut(s) | 761, 802, 1738, 1759, 1948 |
| BseBI | CCWGG | 2 cut(s) | 1525, 1928 |
| BseDI | CCNNGG | 5 cut(s) | 436, 712, 1421, 1927, 2004 |
| BseGI | GGATG | 9 cut(s) | 517, 988, 1159, 1212, 1471, 1513, 1534, 1661, 2168 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 256, 495, 2052 |
| BseMII | CTCAG | 4 cut(s) | 521, 1140, 1709, 1853 |
| BseNI | ACTGG | 5 cut(s) | 761, 802, 1738, 1759, 1948 |
| BseSI | GKGCMC | 2 cut(s) | 785, 925 |
| BseX3I | CGGCCG | 1 cut(s) | 254 |
| BseXI | GCAGC | 4 cut(s) | 21, 802, 1168, 1367 |
| BseYI | CCCAGC | 2 cut(s) | 1919, 2209 |
| BsgI | GTGCAG | 1 cut(s) | 1374 |
| Bsh1236I | CGCG | 3 cut(s) | 78, 265, 820 |
| Bsh1285I | CGRYCG | 1 cut(s) | 257 |
| BshFI | GGCC | 7 cut(s) | 256, 638, 671, 854, 1926, 2003, 2028 |
| BshNI | GGYRCC | 2 cut(s) | 448, 780 |
| BsiEI | CGRYCG | 1 cut(s) | 257 |
| BsiHKAI | GWGCWC | 4 cut(s) | 54, 435, 925, 1369 |
| BsiHKCI | CYCGRG | 2 cut(s) | 712, 2132 |
| BsiSI | CCGG | 6 cut(s) | 110, 133, 253, 257, 713, 1618 |
| BslFI | GGGAC | 2 cut(s) | 702, 1236 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 256, 495, 2052 |
| BsmAI | GTCTC | 3 cut(s) | 151, 1231, 1698 |
| BsmBI | CGTCTC | 1 cut(s) | 1231 |
| BsmFI | GGGAC | 2 cut(s) | 702, 1236 |
| BsmI | GAATGC | 1 cut(s) | 870 |
| BsnI | GGCC | 7 cut(s) | 256, 638, 671, 854, 1926, 2003, 2028 |
| BsoBI | CYCGRG | 2 cut(s) | 712, 2132 |
| Bsp119I | TTCGAA | 1 cut(s) | 24 |
| Bsp1286I | GDGCHC | 5 cut(s) | 54, 435, 785, 925, 1369 |
| Bsp143I | GATC | 8 cut(s) | 207, 463, 821, 937, 1135, 1461, 1993, 2008 |
| Bsp19I | CCATGG | 1 cut(s) | 436 |
| BspACI | CCGC | 9 cut(s) | 76, 107, 250, 314, 362, 416, 869, 1426, 2124 |
| BspANI | GGCC | 7 cut(s) | 256, 638, 671, 854, 1926, 2003, 2028 |
| BspCNI | CTCAG | 4 cut(s) | 520, 1141, 1708, 1852 |
| BspFNI | CGCG | 3 cut(s) | 78, 265, 820 |
| BspLI | GGNNCC | 6 cut(s) | 450, 717, 718, 782, 1224, 1925 |
| BspPI | GGATC | 1 cut(s) | 2016 |
| BspT104I | TTCGAA | 1 cut(s) | 24 |
| BspT107I | GGYRCC | 2 cut(s) | 448, 780 |
| BspTI | CTTAAG | 1 cut(s) | 770 |
| BsrFI | RCCGGY | 4 cut(s) | 109, 252, 256, 1617 |
| BsrI | ACTGG | 5 cut(s) | 761, 802, 1738, 1759, 1948 |
| BssAI | RCCGGY | 4 cut(s) | 109, 252, 256, 1617 |
| BssECI | CCNNGG | 5 cut(s) | 436, 712, 1421, 1927, 2004 |
| BssMI | GATC | 8 cut(s) | 207, 463, 821, 937, 1135, 1461, 1993, 2008 |
| BssNI | GRCGYC | 5 cut(s) | 98, 104, 234, 375, 1766 |
| BssSI | CACGAG | 1 cut(s) | 1362 |
| BssT1I | CCWWGG | 1 cut(s) | 436 |
| Bst2BI | CACGAG | 1 cut(s) | 1362 |
| Bst2UI | CCWGG | 2 cut(s) | 1525, 1928 |
| Bst4CI | ACNGT | 4 cut(s) | 920, 1499, 1957, 2074 |
| Bst6I | CTCTTC | 1 cut(s) | 419 |
| BstACI | GRCGYC | 5 cut(s) | 98, 104, 234, 375, 1766 |
| BstAFI | CTTAAG | 1 cut(s) | 770 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1049 |
| BstBI | TTCGAA | 1 cut(s) | 24 |
| BstC8I | GCNNGC | 4 cut(s) | 111, 254, 1900, 1904 |
| BstDEI | CTNAG | 6 cut(s) | 507, 1149, 1695, 1839, 2064, 2143 |
| BstDSI | CCRYGG | 1 cut(s) | 436 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 493 |
| BstF5I | GGATG | 9 cut(s) | 517, 988, 1159, 1212, 1471, 1513, 1534, 1661, 2168 |
| BstFNI | CGCG | 3 cut(s) | 78, 265, 820 |
| BstH2I | RGCGCY | 1 cut(s) | 142 |
| BstHHI | GCGC | 4 cut(s) | 9, 141, 404, 820 |
| BstKTI | GATC | 8 cut(s) | 210, 466, 824, 940, 1138, 1464, 1996, 2011 |
| BstMAI | GTCTC | 3 cut(s) | 151, 1231, 1698 |
| BstMBI | GATC | 8 cut(s) | 207, 463, 821, 937, 1135, 1461, 1993, 2008 |
| BstMCI | CGRYCG | 1 cut(s) | 257 |
| BstNI | CCWGG | 2 cut(s) | 1525, 1928 |
| BstNSI | RCATGY | 2 cut(s) | 531, 1902 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 714, 1862 |
| BstSCI | CCNGG | 4 cut(s) | 711, 712, 1523, 1926 |
| BstSFI | CTRYAG | 2 cut(s) | 1015, 1956 |
| BstSLI | GKGCMC | 2 cut(s) | 785, 925 |
| BstUI | CGCG | 3 cut(s) | 78, 265, 820 |
| BstV1I | GCAGC | 4 cut(s) | 21, 802, 1168, 1367 |
| BstV2I | GAAGAC | 3 cut(s) | 665, 1652, 2183 |
| BstX2I | RGATCY | 1 cut(s) | 1135 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 581, 809 |
| BstYI | RGATCY | 1 cut(s) | 1135 |
| BstZI | CGGCCG | 1 cut(s) | 254 |
| BsuRI | GGCC | 7 cut(s) | 256, 638, 671, 854, 1926, 2003, 2028 |
| BtgI | CCRYGG | 1 cut(s) | 436 |
| BtgZI | GCGATG | 1 cut(s) | 2003 |
| BtrI | CACGTC | 1 cut(s) | 1801 |
| BtsCI | GGATG | 9 cut(s) | 517, 988, 1159, 1212, 1471, 1513, 1534, 1661, 2168 |
| BtsI | GCAGTG | 1 cut(s) | 968 |
| BtsIMutI | CAGTG | 6 cut(s) | 925, 968, 1504, 1641, 1721, 1766 |
| Cac8I | GCNNGC | 4 cut(s) | 111, 254, 1900, 1904 |
| CfoI | GCGC | 4 cut(s) | 9, 141, 404, 820 |
| Cfr10I | RCCGGY | 4 cut(s) | 109, 252, 256, 1617 |
| Cfr13I | GGNCC | 4 cut(s) | 247, 716, 1223, 1924 |
| Cfr9I | CCCGGG | 1 cut(s) | 712 |
| CseI | GACGC | 8 cut(s) | 67, 106, 112, 157, 190, 271, 491, 1049 |
| Csp6I | GTAC | 3 cut(s) | 1563, 1836, 2070 |
| CviAII | CATG | 7 cut(s) | 437, 528, 809, 992, 1100, 1303, 1899 |
| CviQI | GTAC | 3 cut(s) | 1563, 1836, 2070 |
| DdeI | CTNAG | 6 cut(s) | 507, 1149, 1695, 1839, 2064, 2143 |
| DpnI | GATC | 8 cut(s) | 209, 465, 823, 939, 1137, 1463, 1995, 2010 |
| DpnII | GATC | 8 cut(s) | 207, 463, 821, 937, 1135, 1461, 1993, 2008 |
| DrdI | GACNNNNNNGTC | 4 cut(s) | 200, 233, 236, 374 |
| DseDI | GACNNNNNNGTC | 4 cut(s) | 200, 233, 236, 374 |
| EaeI | YGGCCR | 4 cut(s) | 254, 636, 852, 2026 |
| EagI | CGGCCG | 1 cut(s) | 254 |
| Eam1104I | CTCTTC | 1 cut(s) | 419 |
| EarI | CTCTTC | 1 cut(s) | 419 |
| EciI | GGCGGA | 4 cut(s) | 239, 329, 377, 431 |
| Ecl136II | GAGCTC | 2 cut(s) | 433, 1367 |
| EclXI | CGGCCG | 1 cut(s) | 254 |
| Eco130I | CCWWGG | 1 cut(s) | 436 |
| Eco24I | GRGCYC | 2 cut(s) | 435, 1369 |
| Eco32I | GATATC | 1 cut(s) | 1780 |
| Eco47I | GGWCC | 3 cut(s) | 247, 716, 1223 |
| Eco52I | CGGCCG | 1 cut(s) | 254 |
| Eco53kI | GAGCTC | 2 cut(s) | 433, 1367 |
| Eco57I | CTGAAG | 5 cut(s) | 104, 495, 726, 1019, 1745 |
| Eco88I | CYCGRG | 2 cut(s) | 712, 2132 |
| EcoICRI | GAGCTC | 2 cut(s) | 433, 1367 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 493 |
| EcoO109I | RGGNCCY | 1 cut(s) | 716 |
| EcoRII | CCWGG | 2 cut(s) | 1523, 1926 |
| EcoRV | GATATC | 1 cut(s) | 1780 |
| EcoT14I | CCWWGG | 1 cut(s) | 436 |
| EcoT38I | GRGCYC | 2 cut(s) | 435, 1369 |
| ErhI | CCWWGG | 1 cut(s) | 436 |
| Esp3I | CGTCTC | 1 cut(s) | 1231 |
| FaeI | CATG | 7 cut(s) | 440, 531, 812, 995, 1103, 1306, 1902 |
| FaqI | GGGAC | 2 cut(s) | 702, 1236 |
| FatI | CATG | 7 cut(s) | 436, 527, 808, 991, 1099, 1302, 1898 |
| FauI | CCCGC | 1 cut(s) | 83 |
| FblI | GTMKAC | 1 cut(s) | 326 |
| Fnu4HI | GCNGC | 8 cut(s) | 10, 107, 816, 869, 1182, 1356, 1427, 2124 |
| FokI | GGATG | 9 cut(s) | 524, 995, 1166, 1219, 1458, 1520, 1521, 1668, 2155 |
| FriOI | GRGCYC | 2 cut(s) | 435, 1369 |
| Fsp4HI | GCNGC | 8 cut(s) | 10, 107, 816, 869, 1182, 1356, 1427, 2124 |
| FspBI | CTAG | 3 cut(s) | 653, 1481, 2057 |
| GlaI | GCGC | 4 cut(s) | 8, 140, 403, 819 |
| GluI | GCNGC | 8 cut(s) | 10, 107, 816, 869, 1182, 1356, 1427, 2124 |
| GsaI | CCCAGC | 2 cut(s) | 1923, 2213 |
| GsuI | CTGGAG | 3 cut(s) | 785, 1139, 1965 |
| HaeII | RGCGCY | 1 cut(s) | 142 |
| HaeIII | GGCC | 7 cut(s) | 256, 638, 671, 854, 1926, 2003, 2028 |
| HapII | CCGG | 6 cut(s) | 110, 133, 253, 257, 713, 1618 |
| HgaI | GACGC | 8 cut(s) | 67, 106, 112, 157, 190, 271, 491, 1049 |
| HhaI | GCGC | 4 cut(s) | 9, 141, 404, 820 |
| Hin1I | GRCGYC | 5 cut(s) | 98, 104, 234, 375, 1766 |
| Hin1II | CATG | 7 cut(s) | 440, 531, 812, 995, 1103, 1306, 1902 |
| Hin6I | GCGC | 4 cut(s) | 7, 139, 402, 818 |
| HinP1I | GCGC | 4 cut(s) | 7, 139, 402, 818 |
| HincII | GTYRAC | 5 cut(s) | 327, 589, 843, 1159, 1911 |
| HindII | GTYRAC | 5 cut(s) | 327, 589, 843, 1159, 1911 |
| HinfI | GANTC | 8 cut(s) | 119, 144, 158, 185, 323, 542, 946, 2135 |
| HpaI | GTTAAC | 1 cut(s) | 589 |
| HpaII | CCGG | 6 cut(s) | 110, 133, 253, 257, 713, 1618 |
| HphI | GGTGA | 1 cut(s) | 271 |
| Hpy188III | TCNNGA | 9 cut(s) | 82, 172, 205, 211, 382, 509, 1362, 1664, 1967 |
| HpyAV | CCTTC | 4 cut(s) | 133, 994, 1645, 2153 |
| HpyCH4III | ACNGT | 4 cut(s) | 920, 1499, 1957, 2074 |
| HpyCH4IV | ACGT | 7 cut(s) | 234, 375, 677, 955, 1240, 1766, 1800 |
| HpyF3I | CTNAG | 6 cut(s) | 507, 1149, 1695, 1839, 2064, 2143 |
| HpySE526I | ACGT | 7 cut(s) | 234, 375, 677, 955, 1240, 1766, 1800 |
| Hsp92I | GRCGYC | 5 cut(s) | 98, 104, 234, 375, 1766 |
| Hsp92II | CATG | 7 cut(s) | 440, 531, 812, 995, 1103, 1306, 1902 |
| HspAI | GCGC | 4 cut(s) | 7, 139, 402, 818 |
| KflI | GGGWCCC | 1 cut(s) | 716 |
| KroI | GCCGGC | 2 cut(s) | 109, 252 |
| KroNI | GCCGGC | 2 cut(s) | 111, 254 |
| KspAI | GTTAAC | 1 cut(s) | 589 |
| Kzo9I | GATC | 8 cut(s) | 207, 463, 821, 937, 1135, 1461, 1993, 2008 |
| LmnI | GCTCC | 5 cut(s) | 49, 430, 438, 626, 1946 |
| Lsp1109I | GCAGC | 4 cut(s) | 21, 802, 1168, 1367 |
| LweI | GCATC | 5 cut(s) | 675, 1312, 1668, 1747, 2110 |
| MaeI | CTAG | 3 cut(s) | 653, 1481, 2057 |
| MaeII | ACGT | 7 cut(s) | 234, 375, 677, 955, 1240, 1766, 1800 |
| MaeIII | GTNAC | 9 cut(s) | 259, 502, 673, 1530, 1639, 1810, 1843, 2041, 2059 |
| MalI | GATC | 8 cut(s) | 209, 465, 823, 939, 1137, 1463, 1995, 2010 |
| MboI | GATC | 8 cut(s) | 207, 463, 821, 937, 1135, 1461, 1993, 2008 |
| MflI | RGATCY | 1 cut(s) | 1135 |
| MhlI | GDGCHC | 5 cut(s) | 54, 435, 785, 925, 1369 |
| MlsI | TGGCCA | 2 cut(s) | 854, 2028 |
| MluCI | AATT | 3 cut(s) | 1393, 1578, 1989 |
| MluI | ACGCGT | 1 cut(s) | 263 |
| MluNI | TGGCCA | 2 cut(s) | 854, 2028 |
| MlyI | GAGTC | 6 cut(s) | 128, 152, 153, 332, 551, 2144 |
| MmeI | TCCRAC | 6 cut(s) | 57, 174, 300, 1184, 1390, 1461 |
| Mox20I | TGGCCA | 2 cut(s) | 854, 2028 |
| MroNI | GCCGGC | 2 cut(s) | 109, 252 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1713 |
| MscI | TGGCCA | 2 cut(s) | 854, 2028 |
| Msp20I | TGGCCA | 2 cut(s) | 854, 2028 |
| MspA1I | CMGCKG | 2 cut(s) | 577, 2126 |
| MspCI | CTTAAG | 1 cut(s) | 770 |
| MspI | CCGG | 6 cut(s) | 110, 133, 253, 257, 713, 1618 |
| MspR9I | CCNGG | 4 cut(s) | 713, 714, 1525, 1928 |
| Mva1269I | GAATGC | 1 cut(s) | 870 |
| MvaI | CCWGG | 2 cut(s) | 1525, 1928 |
| MvnI | CGCG | 3 cut(s) | 78, 265, 820 |
| NaeI | GCCGGC | 2 cut(s) | 111, 254 |
| NciI | CCSGG | 2 cut(s) | 713, 714 |
| NcoI | CCATGG | 1 cut(s) | 436 |
| NdeII | GATC | 8 cut(s) | 207, 463, 821, 937, 1135, 1461, 1993, 2008 |
| NgoMIV | GCCGGC | 2 cut(s) | 109, 252 |
| NlaIII | CATG | 7 cut(s) | 440, 531, 812, 995, 1103, 1306, 1902 |
| NlaIV | GGNNCC | 6 cut(s) | 450, 717, 718, 782, 1224, 1925 |
| NmeAIII | GCCGAG | 3 cut(s) | 167, 1402, 2029 |
| NmuCI | GTSAC | 4 cut(s) | 259, 502, 1639, 2059 |
| NspI | RCATGY | 2 cut(s) | 531, 1902 |
| NspV | TTCGAA | 1 cut(s) | 24 |
| PaeI | GCATGC | 1 cut(s) | 1902 |
| PaeR7I | CTCGAG | 1 cut(s) | 2132 |
| PctI | GAATGC | 1 cut(s) | 870 |
| PdiI | GCCGGC | 2 cut(s) | 111, 254 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1713 |
| PfeI | GAWTC | 2 cut(s) | 185, 946 |
| PflFI | GACNNNGTC | 3 cut(s) | 233, 236, 377 |
| PkrI | GCNGC | 8 cut(s) | 11, 108, 817, 870, 1183, 1357, 1428, 2125 |
| PleI | GAGTC | 6 cut(s) | 127, 152, 152, 331, 550, 2143 |
| PpsI | GAGTC | 6 cut(s) | 127, 152, 152, 331, 550, 2143 |
| PpuMI | RGGWCCY | 1 cut(s) | 716 |
| PshAI | GACNNNNGTC | 2 cut(s) | 714, 1862 |
| PshBI | ATTAAT | 1 cut(s) | 519 |
| Psp124BI | GAGCTC | 2 cut(s) | 435, 1369 |
| Psp1406I | AACGTT | 1 cut(s) | 955 |
| Psp5II | RGGWCCY | 1 cut(s) | 716 |
| Psp6I | CCWGG | 2 cut(s) | 1523, 1926 |
| PspFI | CCCAGC | 2 cut(s) | 1919, 2209 |
| PspGI | CCWGG | 2 cut(s) | 1523, 1926 |
| PspN4I | GGNNCC | 6 cut(s) | 450, 717, 718, 782, 1224, 1925 |
| PspPI | GGNCC | 4 cut(s) | 247, 716, 1223, 1924 |
| PspPPI | RGGWCCY | 1 cut(s) | 716 |
| PspXI | VCTCGAGB | 1 cut(s) | 2132 |
| PsuI | RGATCY | 1 cut(s) | 1135 |
| PsyI | GACNNNGTC | 3 cut(s) | 233, 236, 377 |
| PvuII | CAGCTG | 1 cut(s) | 577 |
| RsaI | GTAC | 3 cut(s) | 1564, 1837, 2071 |
| RsaNI | GTAC | 3 cut(s) | 1563, 1836, 2070 |
| SacI | GAGCTC | 2 cut(s) | 435, 1369 |
| SalI | GTCGAC | 1 cut(s) | 325 |
| SatI | GCNGC | 8 cut(s) | 10, 107, 816, 869, 1182, 1356, 1427, 2124 |
| Sau3AI | GATC | 8 cut(s) | 207, 463, 821, 937, 1135, 1461, 1993, 2008 |
| Sau96I | GGNCC | 4 cut(s) | 247, 716, 1223, 1924 |
| ScaI | AGTACT | 1 cut(s) | 1837 |
| SchI | GAGTC | 6 cut(s) | 128, 152, 153, 332, 551, 2144 |
| ScrFI | CCNGG | 4 cut(s) | 713, 714, 1525, 1928 |
| SduI | GDGCHC | 5 cut(s) | 54, 435, 785, 925, 1369 |
| SfaNI | GCATC | 5 cut(s) | 675, 1312, 1668, 1747, 2110 |
| SfcI | CTRYAG | 2 cut(s) | 1015, 1956 |
| Sfr274I | CTCGAG | 1 cut(s) | 2132 |
| SfuI | TTCGAA | 1 cut(s) | 24 |
| SinI | GGWCC | 3 cut(s) | 247, 716, 1223 |
| SlaI | CTCGAG | 1 cut(s) | 2132 |
| SmaI | CCCGGG | 1 cut(s) | 714 |
| SmlI | CTYRAG | 3 cut(s) | 563, 770, 2132 |
| SmoI | CTYRAG | 3 cut(s) | 563, 770, 2132 |
| SpeI | ACTAGT | 1 cut(s) | 1480 |
| SphI | GCATGC | 1 cut(s) | 1902 |
| Sse9I | AATT | 3 cut(s) | 1393, 1578, 1989 |
| SsiI | CCGC | 9 cut(s) | 76, 107, 250, 314, 362, 416, 869, 1426, 2124 |
| SspMI | CTAG | 3 cut(s) | 653, 1481, 2057 |
| SstI | GAGCTC | 2 cut(s) | 435, 1369 |
| StyD4I | CCNGG | 4 cut(s) | 711, 712, 1523, 1926 |
| StyI | CCWWGG | 1 cut(s) | 436 |
| TaaI | ACNGT | 4 cut(s) | 920, 1499, 1957, 2074 |
| TaiI | ACGT | 7 cut(s) | 237, 378, 680, 958, 1243, 1769, 1803 |
| TasI | AATT | 3 cut(s) | 1393, 1578, 1989 |
| TatI | WGTACW | 2 cut(s) | 1562, 1835 |
| TauI | GCSGC | 4 cut(s) | 109, 871, 1429, 2126 |
| TfiI | GAWTC | 2 cut(s) | 185, 946 |
| TscAI | CASTG | 6 cut(s) | 925, 968, 1504, 1648, 1728, 1766 |
| TseFI | GTSAC | 4 cut(s) | 259, 502, 1639, 2059 |
| TseI | GCWGC | 4 cut(s) | 9, 815, 1181, 1355 |
| Tsp45I | GTSAC | 4 cut(s) | 259, 502, 1639, 2059 |
| TspDTI | ATGAA | 5 cut(s) | 17, 1223, 1604, 2094, 2172 |
| TspGWI | ACGGA | 1 cut(s) | 286 |
| TspMI | CCCGGG | 1 cut(s) | 712 |
| TspRI | CASTG | 6 cut(s) | 925, 968, 1504, 1648, 1728, 1766 |
| Tth111I | GACNNNGTC | 3 cut(s) | 233, 236, 377 |
| Vha464I | CTTAAG | 1 cut(s) | 770 |
| VneI | GTGCAC | 1 cut(s) | 921 |
| VpaK11BI | GGWCC | 3 cut(s) | 247, 716, 1223 |
| VspI | ATTAAT | 1 cut(s) | 519 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 493 |
| XceI | RCATGY | 2 cut(s) | 531, 1902 |
| XhoI | CTCGAG | 1 cut(s) | 2132 |
| XmaI | CCCGGG | 1 cut(s) | 712 |
| XmiI | GTMKAC | 1 cut(s) | 326 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1713 |
| XspI | CTAG | 3 cut(s) | 653, 1481, 2057 |
| ZraI | GACGTC | 3 cut(s) | 235, 376, 1767 |
| ZrmI | AGTACT | 1 cut(s) | 1837 |