AT2G04700

Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0015222
Physical Location & Seq
Forward (+)
1646799 .. 1649037
2239 bp
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UTR
Exon/CDS
Intron
AT2G04700.1

Sequence Viewer

Length: 441 bp
ATGAATCTTCAAGCTGTTTCTTGTAGCTTCGGATTCCTTTCGAGTCCACTTGGTGTCACTCCCAGAACTTCGTTTCGTCGCTTCGTAATCCGAGCGAAAACGGAACCGTCGGAGAAATCAGTAGAGATTATGAGGAAATTCTCCGAGCAATATGCTCGTCGCTCTGGGACTTACTTCTGTGTTGATAAAGGAGTTACTTCAGTCGTTATTAAGGGTTTGGCTGAGCATAAAGATTCATATGGTGCACCGCTTTGCCCTTGCAGACACTATGATGATAAAGCTGCTGAGGTTGGACAAGGCTTTTGGAATTGTCCGTGTGTTCCAATGAGAGAGAGGAAGGAGTGCCATTGTATGCTTTTCTTAACTCCTGATAATGATTTCGCTGGAAAAGATCAGACGATTACATCGGATGAAATAAAAGAAACTACAGCTAACATGTGA

Protein Analysis

146

Amino Acids

16.43

Weight (kDa)

8.11

Isoelectric Point (pI)

49.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FeThRed_B PF02943 41 - 141 1.1e-43 Ferredoxin thioredoxin reductase catalytic beta chain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0015222)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G04700 AT2G04700
fragaria_vesca FvH4_6g50060
malus_domestica MD09G1039900.v1.1 MD17G1040500.v1.1
prunus_persica Prupe.3G278500_v2.0.a1
pyrus_communis pycom111g03120 pycom17g03630
rosa_chinensis RchiOBHm_Chr2g0170331
rosa_laevigata RLG00000021946
rosa_multiflora Rmu_sc0012445.1_g000004
rosa_roxburghii Rroxscaffold_2G00081430
rosa_rugosa Rorug02G0548200
rosa_samantha Rh2AG619500 Rh2BG630400
rosa_wichuraiana Rw2G051320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 248
AcsI RAATTY 1 cut(s) 137
AcuI CTGAAG 1 cut(s) 183
AdeI CACNNNGTG 1 cut(s) 53
AflIII ACRYGT 1 cut(s) 435
AgsI TTSAA 1 cut(s) 11
AluBI AGCT 4 cut(s) 14, 27, 281, 431
AluI AGCT 4 cut(s) 14, 27, 281, 431
Alw21I GWGCWC 1 cut(s) 247
Alw44I GTGCAC 1 cut(s) 243
ApaLI GTGCAC 1 cut(s) 243
ApeKI GCWGC 1 cut(s) 281
ApoI RAATTY 1 cut(s) 137
ArsI GACNNNNNNTTYG 2 cut(s) 285, 317
BaeGI GKGCMC 1 cut(s) 247
Bbv12I GWGCWC 1 cut(s) 247
BbvCI CCTCAGC 1 cut(s) 285
BbvI GCAGC 1 cut(s) 268
BcgI CGANNNNNNTGC 4 cut(s) 134, 137, 168, 171
BfmI CTRYAG 1 cut(s) 426
BisI GCNGC 1 cut(s) 282
BlpI GCTNAGC 1 cut(s) 222
BlsI GCNGC 1 cut(s) 283
BmiI GGNNCC 1 cut(s) 105
Bpu10I CCTNAGC 1 cut(s) 285
Bpu1102I GCTNAGC 1 cut(s) 222
BseGI GGATG 1 cut(s) 415
BseMII CTCAG 2 cut(s) 213, 276
BseSI GKGCMC 1 cut(s) 247
BseXI GCAGC 1 cut(s) 268
BsiHKAI GWGCWC 1 cut(s) 247
BslFI GGGAC 1 cut(s) 181
BsmFI GGGAC 1 cut(s) 181
Bsp1286I GDGCHC 1 cut(s) 247
Bsp143I GATC 1 cut(s) 391
Bsp1720I GCTNAGC 1 cut(s) 222
BspACI CCGC 1 cut(s) 248
BspCNI CTCAG 2 cut(s) 214, 277
BspLI GGNNCC 1 cut(s) 105
BssMI GATC 1 cut(s) 391
Bst4CI ACNGT 1 cut(s) 108
BstDEI CTNAG 2 cut(s) 222, 285
BstF5I GGATG 1 cut(s) 415
BstKTI GATC 1 cut(s) 394
BstMBI GATC 1 cut(s) 391
BstNSI RCATGY 1 cut(s) 439
BstSFI CTRYAG 1 cut(s) 426
BstSLI GKGCMC 1 cut(s) 247
BstV1I GCAGC 1 cut(s) 268
BtsCI GGATG 1 cut(s) 415
CviAII CATG 1 cut(s) 436
CviJI RGCY 6 cut(s) 14, 27, 221, 281, 300, 431
CviKI_1 RGCY 6 cut(s) 14, 27, 221, 281, 300, 431
DdeI CTNAG 2 cut(s) 222, 285
DpnI GATC 1 cut(s) 393
DpnII GATC 1 cut(s) 391
DraIII CACNNNGTG 1 cut(s) 53
Eco57I CTGAAG 1 cut(s) 183
FaeI CATG 1 cut(s) 439
FaiI YATR 8 cut(s) 131, 153, 228, 238, 240, 270, 353, 437
FaqI GGGAC 1 cut(s) 181
FatI CATG 1 cut(s) 435
FauNDI CATATG 1 cut(s) 238
Fnu4HI GCNGC 1 cut(s) 282
FokI GGATG 1 cut(s) 422
Fsp4HI GCNGC 1 cut(s) 282
GluI GCNGC 1 cut(s) 282
Hin1II CATG 1 cut(s) 439
HinfI GANTC 4 cut(s) 4, 33, 43, 233
Hpy166II GTNNAC 2 cut(s) 47, 245
Hpy188I TCNGA 6 cut(s) 32, 92, 112, 145, 396, 409
Hpy188III TCNNGA 1 cut(s) 368
Hpy8I GTNNAC 2 cut(s) 47, 245
Hpy99I CGWCG 3 cut(s) 81, 112, 162
HpyAV CCTTC 1 cut(s) 331
HpyCH4III ACNGT 1 cut(s) 108
HpyCH4V TGCA 2 cut(s) 245, 261
HpyF3I CTNAG 2 cut(s) 222, 285
Hsp92II CATG 1 cut(s) 439
Kzo9I GATC 1 cut(s) 391
LpnPI CCDG 4 cut(s) 76, 150, 369, 381
Lsp1109I GCAGC 1 cut(s) 268
MaeIII GTNAC 2 cut(s) 55, 193
MalI GATC 1 cut(s) 393
MboI GATC 1 cut(s) 391
MhlI GDGCHC 1 cut(s) 247
MluCI AATT 2 cut(s) 137, 307
MlyI GAGTC 1 cut(s) 52
MmeI TCCRAC 2 cut(s) 90, 271
MnlI CCTC 3 cut(s) 126, 280, 327
MseI TTAA 2 cut(s) 210, 362
MslI CAYNNNNRTG 1 cut(s) 270
NdeI CATATG 1 cut(s) 238
NdeII GATC 1 cut(s) 391
NlaIII CATG 1 cut(s) 439
NlaIV GGNNCC 1 cut(s) 105
NmuCI GTSAC 1 cut(s) 55
NspI RCATGY 1 cut(s) 439
PciI ACATGT 1 cut(s) 435
PfeI GAWTC 3 cut(s) 4, 33, 233
PkrI GCNGC 1 cut(s) 283
PleI GAGTC 1 cut(s) 51
PpsI GAGTC 1 cut(s) 51
PscI ACATGT 1 cut(s) 435
PspN4I GGNNCC 1 cut(s) 105
RseI CAYNNNNRTG 1 cut(s) 270
SaqAI TTAA 2 cut(s) 210, 362
SatI GCNGC 1 cut(s) 282
Sau3AI GATC 1 cut(s) 391
SchI GAGTC 1 cut(s) 52
SduI GDGCHC 1 cut(s) 247
SetI ASST 5 cut(s) 16, 29, 283, 291, 433
SfcI CTRYAG 1 cut(s) 426
SmiMI CAYNNNNRTG 1 cut(s) 270
Sse9I AATT 2 cut(s) 137, 307
SsiI CCGC 1 cut(s) 248
TaaI ACNGT 1 cut(s) 108
TaqI TCGA 1 cut(s) 41
TasI AATT 2 cut(s) 137, 307
TfiI GAWTC 3 cut(s) 4, 33, 233
Tru1I TTAA 2 cut(s) 210, 362
Tru9I TTAA 2 cut(s) 210, 362
TseFI GTSAC 1 cut(s) 55
TseI GCWGC 1 cut(s) 281
Tsp45I GTSAC 1 cut(s) 55
TspDTI ATGAA 3 cut(s) 17, 225, 426
TspGWI ACGGA 2 cut(s) 116, 303
VneI GTGCAC 1 cut(s) 243
XapI RAATTY 1 cut(s) 137
XceI RCATGY 1 cut(s) 439
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.