Prupe.3G278500_v2.0.a1

Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
25542499 .. 25544573
2075 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G278500.1

Sequence Viewer

Length: 441 bp
ATGACTCTGCAACTCCAAGCTCCGTCCTTCCGCGTCAGCATTTCCTCCTTCGTTTCTCCTCTCAGACGCTCCACCCACCGCCATGTAATCCGAGCTCAAGCGGAACCATCAGAGAAATCTGTTGAAATTATGAGGAAGTTCTCTGAGCAGTATGCTCGCAAGTCTGGAACATACTTTTGCGTGGATAAGGGAGTGACTTCTGTTGTTATCAAGGGATTGGCAGACCATAAAGATTCATTGGGAGCGCCACTCTGCCCTTGTCGGCATTATGATGACAAACCTGCCGAGGCTGGCCAAGGCTTTTGGAACTGCCCATGTGTTCCTATGAGAGAGAGGAAGGAGTGCCACTGCATGCTCTTTCTCACTTCTGACAATGATTTTGCTGGACCGGAACAGACCATCTCCTTGGAAGAGATCAGAGAATCAACAGCAAACATGTAA

Protein Analysis

147

Amino Acids

16.46

Weight (kDa)

7.61

Isoelectric Point (pI)

59.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015222)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G04700 AT2G04700
fragaria_vesca FvH4_6g50060
malus_domestica MD09G1039900.v1.1 MD17G1040500.v1.1
prunus_persica Prupe.3G278500_v2.0.a1
pyrus_communis pycom111g03120 pycom17g03630
rosa_chinensis RchiOBHm_Chr2g0170331
rosa_laevigata RLG00000021946
rosa_multiflora Rmu_sc0012445.1_g000004
rosa_roxburghii Rroxscaffold_2G00081430
rosa_rugosa Rorug02G0548200
rosa_samantha Rh2AG619500 Rh2BG630400
rosa_wichuraiana Rw2G051320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 289
AccII CGCG 1 cut(s) 33
AciI CCGC 3 cut(s) 31, 79, 101
AcoI YGGCCR 1 cut(s) 292
AflIII ACRYGT 1 cut(s) 435
AgsI TTSAA 1 cut(s) 125
AluBI AGCT 2 cut(s) 20, 95
AluI AGCT 2 cut(s) 20, 95
Alw21I GWGCWC 1 cut(s) 97
AoxI GGCC 1 cut(s) 292
ArsI GACNNNNNNTTYG 2 cut(s) 362, 394
AspLEI GCGC 1 cut(s) 247
AspS9I GGNCC 1 cut(s) 386
AvaII GGWCC 1 cut(s) 386
BalI TGGCCA 1 cut(s) 294
BanII GRGCYC 1 cut(s) 97
Bbv12I GWGCWC 1 cut(s) 97
BccI CCATC 2 cut(s) 115, 407
BcgI CGANNNNNNTGC 2 cut(s) 137, 171
BfoI RGCGCY 1 cut(s) 248
BfuAI ACCTGC 1 cut(s) 289
Bme18I GGWCC 1 cut(s) 386
BmgT120I GGNCC 1 cut(s) 386
BmiI GGNNCC 1 cut(s) 105
BplI GAGNNNNNCTC 2 cut(s) 234, 266
BpuEI CTTGAG 1 cut(s) 81
BsaJI CCNNGG 3 cut(s) 285, 295, 405
BsaWI WCCGGW 1 cut(s) 388
BseDI CCNNGG 3 cut(s) 285, 295, 405
BseMII CTCAG 2 cut(s) 76, 135
BseRI GAGGAG 1 cut(s) 48
Bsh1236I CGCG 1 cut(s) 33
BshFI GGCC 1 cut(s) 294
BsiHKAI GWGCWC 1 cut(s) 97
BsiSI CCGG 1 cut(s) 389
BsnI GGCC 1 cut(s) 294
Bsp1286I GDGCHC 1 cut(s) 97
Bsp143I GATC 1 cut(s) 414
BspACI CCGC 3 cut(s) 31, 79, 101
BspANI GGCC 1 cut(s) 294
BspCNI CTCAG 2 cut(s) 75, 136
BspFNI CGCG 1 cut(s) 33
BspLI GGNNCC 1 cut(s) 105
BspMI ACCTGC 1 cut(s) 289
BssECI CCNNGG 3 cut(s) 285, 295, 405
BssMI GATC 1 cut(s) 414
BssT1I CCWWGG 2 cut(s) 295, 405
Bst6I CTCTTC 1 cut(s) 405
BstC8I GCNNGC 3 cut(s) 157, 292, 353
BstDEI CTNAG 2 cut(s) 62, 144
BstFNI CGCG 1 cut(s) 33
BstH2I RGCGCY 1 cut(s) 248
BstHHI GCGC 1 cut(s) 247
BstKTI GATC 1 cut(s) 417
BstMBI GATC 1 cut(s) 414
BstNSI RCATGY 2 cut(s) 355, 439
BstUI CGCG 1 cut(s) 33
BstXI CCANNNNNNTGG 1 cut(s) 406
BsuRI GGCC 1 cut(s) 294
BtsI GCAGTG 1 cut(s) 346
BtsIMutI CAGTG 1 cut(s) 346
BveI ACCTGC 1 cut(s) 289
Cac8I GCNNGC 3 cut(s) 157, 292, 353
CfoI GCGC 1 cut(s) 247
Cfr13I GGNCC 1 cut(s) 386
CseI GACGC 2 cut(s) 22, 75
CviAII CATG 4 cut(s) 83, 315, 352, 436
CviJI RGCY 5 cut(s) 20, 95, 290, 294, 300
CviKI_1 RGCY 5 cut(s) 20, 95, 290, 294, 300
DdeI CTNAG 2 cut(s) 62, 144
DpnI GATC 1 cut(s) 416
DpnII GATC 1 cut(s) 414
EaeI YGGCCR 1 cut(s) 292
Eam1104I CTCTTC 1 cut(s) 405
EarI CTCTTC 1 cut(s) 405
Ecl136II GAGCTC 1 cut(s) 95
Eco130I CCWWGG 2 cut(s) 295, 405
Eco24I GRGCYC 1 cut(s) 97
Eco47I GGWCC 1 cut(s) 386
Eco53kI GAGCTC 1 cut(s) 95
EcoICRI GAGCTC 1 cut(s) 95
EcoT14I CCWWGG 2 cut(s) 295, 405
EcoT38I GRGCYC 1 cut(s) 97
ErhI CCWWGG 2 cut(s) 295, 405
FaeI CATG 4 cut(s) 86, 318, 355, 439
FatI CATG 4 cut(s) 82, 314, 351, 435
FriOI GRGCYC 1 cut(s) 97
GlaI GCGC 1 cut(s) 246
HaeII RGCGCY 1 cut(s) 248
HaeIII GGCC 1 cut(s) 294
HapII CCGG 1 cut(s) 389
HgaI GACGC 2 cut(s) 22, 75
HhaI GCGC 1 cut(s) 247
Hin1II CATG 4 cut(s) 86, 318, 355, 439
Hin6I GCGC 1 cut(s) 245
HinP1I GCGC 1 cut(s) 245
HinfI GANTC 3 cut(s) 4, 233, 422
HpaII CCGG 1 cut(s) 389
Hpy188I TCNGA 6 cut(s) 65, 92, 112, 145, 370, 419
Hpy188III TCNNGA 1 cut(s) 165
HpyAV CCTTC 3 cut(s) 37, 58, 331
HpyCH4V TGCA 2 cut(s) 10, 351
HpyF3I CTNAG 2 cut(s) 62, 144
Hsp92II CATG 4 cut(s) 86, 318, 355, 439
HspAI GCGC 1 cut(s) 245
Kzo9I GATC 1 cut(s) 414
LmnI GCTCC 3 cut(s) 25, 74, 242
LpnPI CCDG 5 cut(s) 150, 276, 294, 369, 402
MaeIII GTNAC 1 cut(s) 193
MalI GATC 1 cut(s) 416
MboI GATC 1 cut(s) 414
MboII GAAGA 1 cut(s) 422
MhlI GDGCHC 1 cut(s) 97
MlsI TGGCCA 1 cut(s) 294
MluCI AATT 1 cut(s) 126
MluNI TGGCCA 1 cut(s) 294
MnlI CCTC 5 cut(s) 55, 69, 126, 280, 327
Mox20I TGGCCA 1 cut(s) 294
MscI TGGCCA 1 cut(s) 294
MslI CAYNNNNRTG 2 cut(s) 81, 270
Msp20I TGGCCA 1 cut(s) 294
MspI CCGG 1 cut(s) 389
MvnI CGCG 1 cut(s) 33
NdeII GATC 1 cut(s) 414
NlaIII CATG 4 cut(s) 86, 318, 355, 439
NlaIV GGNNCC 1 cut(s) 105
NmeAIII GCCGAG 1 cut(s) 310
NmuCI GTSAC 1 cut(s) 193
NspI RCATGY 2 cut(s) 355, 439
PaeI GCATGC 1 cut(s) 355
PciI ACATGT 1 cut(s) 435
PfeI GAWTC 2 cut(s) 233, 422
PscI ACATGT 1 cut(s) 435
Psp124BI GAGCTC 1 cut(s) 97
PspN4I GGNNCC 1 cut(s) 105
PspPI GGNCC 1 cut(s) 386
RseI CAYNNNNRTG 2 cut(s) 81, 270
SacI GAGCTC 1 cut(s) 97
Sau3AI GATC 1 cut(s) 414
Sau96I GGNCC 1 cut(s) 386
SduI GDGCHC 1 cut(s) 97
SetI ASST 3 cut(s) 22, 97, 283
SinI GGWCC 1 cut(s) 386
SmiMI CAYNNNNRTG 2 cut(s) 81, 270
SmlI CTYRAG 1 cut(s) 96
SmoI CTYRAG 1 cut(s) 96
SphI GCATGC 1 cut(s) 355
Sse9I AATT 1 cut(s) 126
SsiI CCGC 3 cut(s) 31, 79, 101
SstI GAGCTC 1 cut(s) 97
StyI CCWWGG 2 cut(s) 295, 405
TasI AATT 1 cut(s) 126
TfiI GAWTC 2 cut(s) 233, 422
TscAI CASTG 1 cut(s) 353
TseFI GTSAC 1 cut(s) 193
Tsp45I GTSAC 1 cut(s) 193
TspDTI ATGAA 1 cut(s) 225
TspGWI ACGGA 1 cut(s) 12
TspRI CASTG 1 cut(s) 353
VpaK11BI GGWCC 1 cut(s) 386
XceI RCATGY 2 cut(s) 355, 439
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.