Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0004311

Physical Location & Seq

Genomic Coordinates Reverse (-)

1697902 .. 1701438

Gene Structure 3537 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G04842.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1953 bp

ATGGCCTCTTCTCATTCTCTTCTCTTTTCTTCTTCCTTCCTCTCTAAACCCTCTTCTTTCACTTCTTCTCTGAGACGGTTTGTTTACCTTCCCACTCGCCAATTTTGGCCAAGGCAGCGACATGGTTTCTCTACCGTCTTCGCCGTCGCCACCGAGCCAGCTATCTCCAGCAGCGGTCCTAAGAAAGCAGAGCCATCGACGGTCGTGCTTCCTAGTAATGAATCATCTGATAAGCTTCTCAAAATTCGACACACGTGTGCGCATGTAATGGCAATGGCAGTTCAGAAACTCTTCCCGGATGCAAAAGTGACGATAGGTCCTTGGATTGATAATGGTTTCTACTATGATTTTGATATGGAGCCTTTAACAGATAAAGACCTTAAGAGGATCAAGAAAGAGATGGATCGTATCATTAGTCGGAATTTACCACTTTTAAGAGAAGAAGTATCTAGAGAAGAAGCGAAGAAAAGGATCATGGCGATAAATGAGCCTTATAAGATGGAGATTTTGGATGGTATTAAGGAAGAACCCATCACCGTTTATCATATCGGTAATGAATGGTGGGATCTTTGTGCGGGTCCTCATGTCGAGACCACAGGGAAGATAAACAAGAAAGCAGTTGAACTAGAATCTGTTGCTGGTGCATACTGGAGAGGAGATGAAAAGAGGCAAATGCTTCAGAGGATATACGGAACAGCTTGGGAGAGCGAAGAGCAACTGAAAGCATATCTTCATTTTAAAGAAGAAGCTAAACGCAGGGATCATAGACGCATCGGCCAAGACCTTGATCTGTTTTCTATCCAGGATGAAGCTGGAGGAGGGTTAGTGTTTTGGCATCCGAAAGGTGCAATTGTTAGAAACATAATTGAAGAATCGTGGAAGAAAATGCATGTTGAACATGGTTATGATTTGATCTATACTCCTCATGTTGCCAAAGCTGACCTGTGGAAGATCAGTGGTCACTTGGACTTCTACAGAGAGAATATGTATGATCAAATGGAGATCGAGGATGAGCTTTATCAACTCCGACCAATGAATTGCCCTTACCACATCTTGCTTTACCAAAGAAAGCGTCAATCATATCGAGATTTGCCCATAAGAGTTGCAGAGCTCGGTACAGTTTACAGATATGAGTTGTCTGGTAGCTTGCACGGTCTCTTCCGTGTCAGAGGGTTCACACAGGACGATGCACACATATTTTGTTTAGAGGATCAGATCAAAGATGAGATCAGAGGTGTTCTAGATCTCACAGAAGAGATATTGTCGAGGTTTGGATTCAACAAGTATGAGGTTAACTTATCAACTAGACCTGAAAAATCAGTTGGAGGTGATGATATATGGGAGAAGGCGACCTGTGCCCTTAGAGATGCTTTAGATGATAAGGGATGGAGCTATGAGGTTGACGAAGGAGGTGGCGCCTTTTACGGCCCAAAGATCGACCTTAAGATTGAAGATGCATTGGGTAGAAAATGGCAGTGCTCAACTATTCAGGTCGACTTCAATCTTCCTCAGAGATTTGACATTACCTATGTAGACACAAACTCAGATAAGAAACGTCCTATAATGATCCACAGAGCGGTTTTAGGATCATTAGAAAGATTTTTCGGTGTTCTCATAGAACACTACGCAGGGGATTTCCCGTTATGGCTCTCTCCTGTTCAAGTCCGGGTCTTACCTGTCACAGACAATCAGTTGGAGTTTTGTAAGGAAGTGAGTAAGAAACTGAGAGCTTGTGGAGTGAGGGCTGAGTTGTGCCATGGGGAGAGACTGCCTAAGCTCATAAGGAACGCAGAGACGCAGAAGATCCCGTTAATGGCGGTTGTTGGACCCAAAGAAGTCGAGACCGGAACTGTTACCGTTAGATCGAGGTTTGGAGGAGAGCTTGGAACCATTCCTGTTGATGACCTCATCAACAAAATCAACATTGCAGTTGAAACCAGAACTGCTCTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004812 GO:0004829 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006435 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010467 GO:0016070 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0034645 GO:0034660 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090304 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

HGTP_anticodon tRNA-synt_2b tRNA_SAD

Protein Analysis

650

Amino Acids

74.78

Weight (kDa)

6.47

Isoelectric Point (pI)

48.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA_SAD	PF07973	178 - 230	6.8e-13	Threonyl and Alanyl tRNA synthetase second additional domain
tRNA-synt_2b	PF00587	336 - 542	1.2e-51	tRNA synthetase class II core domain (G, H, P, S and T)
HGTP_anticodon	PF03129	554 - 640	6.8e-21	Anticodon binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004311)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G04842 AT2G04842
fragaria_vesca	FvH4_6g41340 FvH4_6g41340 FvH4_6g41340 FvH4_6g41340 FvH4_6g41340 FvH4_6g41340 FvH4_6g41340
malus_domestica	MD05G1333800.v1.1 MD09G1120400.v1.1 MD17G1111100.v1.1
prunus_persica	Prupe.3G203100_v2.0.a1 Prupe.3G203100_v2.0.a1 Prupe.3G203100_v2.0.a1 Prupe.3G203100_v2.0.a1
pyrus_communis	pycom05g23910 pycom05g24220 pycom05g30420 pycom09g04510 pycom15g36000 pycom17g10340
rosa_chinensis	RchiOBHm_Chr2g0156891
rosa_laevigata	RLG00000020950
rosa_multiflora	Rmu_ssc0000408.1_g000001
rosa_roxburghii	Rroxscaffold_2G00092610
rosa_rugosa	Rorug02G0456900
rosa_samantha	Rh2AG522600 Rh2BG535900 Rh2CG507500 Rh2DG544900
rosa_wichuraiana	Rw2G043160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	495
Acc16I	TGCGCA	1 cut(s)	261
AccB1I	GGYRCC	1 cut(s)	1415
AccBSI	CCGCTC	1 cut(s)	1577
AccI	GTMKAC	2 cut(s)	1494, 1533
AciI	CCGC	4 cut(s)	174, 575, 1577, 1817
AclWI	GGATC	9 cut(s)	395, 411, 479, 573, 768, 1218, 1561, 1594, 1798
AcoI	YGGCCR	2 cut(s)	107, 775
AcsI	RAATTY	2 cut(s)	243, 421
AcuI	CTGAAG	1 cut(s)	662
AcvI	CACGTG	1 cut(s)	255
AcyI	GRCGYC	1 cut(s)	1416
AfaI	GTAC	1 cut(s)	1117
AfiI	CCNNNNNNNGG	2 cut(s)	1576, 1813
AflII	CTTAAG	2 cut(s)	380, 1442
AflIII	ACRYGT	2 cut(s)	252, 254
AgsI	TTSAA	8 cut(s)	623, 869, 896, 1279, 1451, 1501, 1661, 1934
AhdI	GACNNNNNGTC	1 cut(s)	315
AjnI	CCWGG	1 cut(s)	801
AjuI	GAANNNNNNNTTGG	2 cut(s)	1305, 1337
AleI	CACNNNNGTG	1 cut(s)	255
Alw21I	GWGCWC	2 cut(s)	1113, 1481
Alw26I	GTCTC	6 cut(s)	67, 584, 1160, 1759, 1787, 1835
AlwI	GGATC	9 cut(s)	395, 411, 479, 573, 768, 1218, 1561, 1594, 1798
AoxI	GGCC	4 cut(s)	3, 107, 775, 1426
ApeKI	GCWGC	2 cut(s)	115, 171
ApoI	RAATTY	2 cut(s)	243, 421
ArsI	GACNNNNNNTTYG	2 cut(s)	1057, 1089
Asp700I	GAANNNNTTC	1 cut(s)	290
AspLEI	GCGC	2 cut(s)	262, 1418
AspS9I	GGNCC	5 cut(s)	176, 317, 578, 1427, 1826
AsuC2I	CCSGG	2 cut(s)	296, 1667
AsuHPI	GGTGA	2 cut(s)	526, 1340
AvaII	GGWCC	4 cut(s)	176, 317, 578, 1826
BaeGI	GKGCMC	1 cut(s)	1360
BalI	TGGCCA	1 cut(s)	109
BanI	GGYRCC	1 cut(s)	1415
BanII	GRGCYC	1 cut(s)	1113
BbrPI	CACGTG	1 cut(s)	255
BbsI	GAAGAC	1 cut(s)	130
Bbv12I	GWGCWC	2 cut(s)	1113, 1481
BbvI	GCAGC	2 cut(s)	127, 183
BccI	CCATC	6 cut(s)	202, 394, 493, 506, 539, 1380
BceAI	ACGGC	2 cut(s)	128, 1441
BcgI	CGANNNNNNTGC	4 cut(s)	177, 187, 211, 221
BciT130I	CCWGG	1 cut(s)	803
BclI	TGATCA	1 cut(s)	991
BcnI	CCSGG	2 cut(s)	296, 1667
BcoDI	GTCTC	6 cut(s)	67, 584, 1160, 1759, 1787, 1835
BfaI	CTAG	5 cut(s)	213, 450, 626, 1241, 1305
BfmI	CTRYAG	1 cut(s)	973
BfoI	RGCGCY	1 cut(s)	1419
BfrI	CTTAAG	2 cut(s)	380, 1442
BglII	AGATCT	1 cut(s)	1243
BisI	GCNGC	2 cut(s)	116, 172
BlsI	GCNGC	2 cut(s)	117, 173
Bme1390I	CCNGG	3 cut(s)	296, 803, 1667
Bme18I	GGWCC	4 cut(s)	176, 317, 578, 1826
BmeRI	GACNNNNNGTC	1 cut(s)	315
BmgT120I	GGNCC	5 cut(s)	176, 317, 578, 1427, 1826
BmiI	GGNNCC	5 cut(s)	360, 579, 1417, 1828, 1888
BmrFI	CCNGG	3 cut(s)	296, 803, 1667
BmsI	GCATC	6 cut(s)	289, 780, 844, 1177, 1357, 1444
BpiI	GAAGAC	1 cut(s)	130
BpmI	CTGGAG	3 cut(s)	151, 670, 834
Bpu10I	CCTNAGC	1 cut(s)	1773
BpuMI	CCSGG	2 cut(s)	296, 1667
BsaAI	YACGTR	1 cut(s)	255
BsaHI	GRCGYC	1 cut(s)	1416
BsaI	GGTCTC	3 cut(s)	584, 1160, 1835
BsaJI	CCNNGG	3 cut(s)	110, 320, 1756
BsaWI	WCCGGW	1 cut(s)	1844
BsaXI	ACNNNNNCTCC	2 cut(s)	810, 840
Bsc4I	CCNNNNNNNGG	2 cut(s)	1576, 1813
Bse1I	ACTGG	1 cut(s)	653
Bse3DI	GCAATG	2 cut(s)	279, 1923
BseBI	CCWGG	1 cut(s)	803
BseDI	CCNNGG	3 cut(s)	110, 320, 1756
BseGI	GGATG	6 cut(s)	304, 517, 811, 835, 1015, 1391
BseLI	CCNNNNNNNGG	2 cut(s)	1576, 1813
BseMI	GCAATG	2 cut(s)	279, 1923
BseMII	CTCAG	5 cut(s)	62, 1523, 1557, 1715, 1737
BseNI	ACTGG	1 cut(s)	653
BseRI	GAGGAG	4 cut(s)	669, 831, 912, 1890
BseSI	GKGCMC	1 cut(s)	1360
BseXI	GCAGC	2 cut(s)	127, 183
Bsh1285I	CGRYCG	1 cut(s)	204
BshFI	GGCC	4 cut(s)	5, 109, 777, 1428
BshNI	GGYRCC	1 cut(s)	1415
BsiEI	CGRYCG	1 cut(s)	204
BsiHKAI	GWGCWC	2 cut(s)	1113, 1481
BsiSI	CCGG	3 cut(s)	296, 1666, 1845
BslI	CCNNNNNNNGG	2 cut(s)	1576, 1813
BsmAI	GTCTC	6 cut(s)	67, 584, 1160, 1759, 1787, 1835
BsmBI	CGTCTC	2 cut(s)	67, 1787
BsnI	GGCC	4 cut(s)	5, 109, 777, 1428
Bso31I	GGTCTC	3 cut(s)	584, 1160, 1835
Bsp1286I	GDGCHC	3 cut(s)	1113, 1360, 1481
Bsp19I	CCATGG	1 cut(s)	1756
BspACI	CCGC	4 cut(s)	174, 575, 1577, 1817
BspANI	GGCC	4 cut(s)	5, 109, 777, 1428
BspCNI	CTCAG	5 cut(s)	63, 1522, 1556, 1716, 1738
BspLI	GGNNCC	5 cut(s)	360, 579, 1417, 1828, 1888
BspPI	GGATC	9 cut(s)	395, 411, 479, 573, 768, 1218, 1561, 1594, 1798
BspQI	GCTCTTC	1 cut(s)	705
BspT107I	GGYRCC	1 cut(s)	1415
BspTI	CTTAAG	2 cut(s)	380, 1442
BspTNI	GGTCTC	3 cut(s)	584, 1160, 1835
BsrBI	CCGCTC	1 cut(s)	1577
BsrDI	GCAATG	2 cut(s)	279, 1923
BsrI	ACTGG	1 cut(s)	653
BssECI	CCNNGG	3 cut(s)	110, 320, 1756
BssNI	GRCGYC	1 cut(s)	1416
BssT1I	CCWWGG	3 cut(s)	110, 320, 1756
Bst2UI	CCWGG	1 cut(s)	803
Bst4CI	ACNGT	8 cut(s)	78, 136, 202, 538, 1120, 1154, 1852, 1858
Bst6I	CTCTTC	7 cut(s)	13, 24, 58, 296, 705, 1163, 1248
BstACI	GRCGYC	1 cut(s)	1416
BstAFI	CTTAAG	2 cut(s)	380, 1442
BstBAI	YACGTR	1 cut(s)	255
BstC8I	GCNNGC	2 cut(s)	159, 1148
BstDEI	CTNAG	8 cut(s)	71, 180, 1361, 1509, 1543, 1724, 1746, 1773
BstDSI	CCRYGG	1 cut(s)	1756
BstF5I	GGATG	6 cut(s)	304, 517, 811, 835, 1015, 1391
BstH2I	RGCGCY	1 cut(s)	1419
BstHHI	GCGC	2 cut(s)	262, 1418
BstMAI	GTCTC	6 cut(s)	67, 584, 1160, 1759, 1787, 1835
BstMCI	CGRYCG	1 cut(s)	204
BstMWI	GCNNNNNNNGC	2 cut(s)	115, 1355
BstNI	CCWGG	1 cut(s)	803
BstNSI	RCATGY	2 cut(s)	266, 893
BstSCI	CCNGG	3 cut(s)	294, 801, 1665
BstSFI	CTRYAG	1 cut(s)	973
BstSLI	GKGCMC	1 cut(s)	1360
BstV1I	GCAGC	2 cut(s)	127, 183
BstV2I	GAAGAC	1 cut(s)	130
BstX2I	RGATCY	3 cut(s)	565, 1243, 1803
BstYI	RGATCY	3 cut(s)	565, 1243, 1803
BsuRI	GGCC	4 cut(s)	5, 109, 777, 1428
BtgI	CCRYGG	1 cut(s)	1756
BtsCI	GGATG	6 cut(s)	304, 517, 811, 835, 1015, 1391
BtsI	GCAGTG	1 cut(s)	1481
BtsIMutI	CAGTG	2 cut(s)	961, 1481
Cac8I	GCNNGC	2 cut(s)	159, 1148
CfoI	GCGC	2 cut(s)	262, 1418
Cfr13I	GGNCC	5 cut(s)	176, 317, 578, 1427, 1826
CseI	GACGC	3 cut(s)	777, 1061, 1804
Csp6I	GTAC	1 cut(s)	1116
CviAII	CATG	8 cut(s)	122, 263, 475, 584, 890, 899, 926, 1757
CviQI	GTAC	1 cut(s)	1116
DdeI	CTNAG	8 cut(s)	71, 180, 1361, 1509, 1543, 1724, 1746, 1773
DinI	GGCGCC	1 cut(s)	1417
DraI	TTTAAA	1 cut(s)	739
DriI	GACNNNNNGTC	1 cut(s)	315
EaeI	YGGCCR	2 cut(s)	107, 775
Eam1104I	CTCTTC	7 cut(s)	13, 24, 58, 296, 705, 1163, 1248
Eam1105I	GACNNNNNGTC	1 cut(s)	315
EarI	CTCTTC	7 cut(s)	13, 24, 58, 296, 705, 1163, 1248
Ecl136II	GAGCTC	1 cut(s)	1111
Eco130I	CCWWGG	3 cut(s)	110, 320, 1756
Eco24I	GRGCYC	1 cut(s)	1113
Eco31I	GGTCTC	3 cut(s)	584, 1160, 1835
Eco47I	GGWCC	4 cut(s)	176, 317, 578, 1826
Eco53kI	GAGCTC	1 cut(s)	1111
Eco57I	CTGAAG	1 cut(s)	662
Eco72I	CACGTG	1 cut(s)	255
EcoICRI	GAGCTC	1 cut(s)	1111
EcoO109I	RGGNCCY	2 cut(s)	317, 578
EcoRII	CCWGG	1 cut(s)	801
EcoT14I	CCWWGG	3 cut(s)	110, 320, 1756
EcoT22I	ATGCAT	2 cut(s)	891, 1459
EcoT38I	GRGCYC	1 cut(s)	1113
EgeI	GGCGCC	1 cut(s)	1417
EheI	GGCGCC	1 cut(s)	1417
ErhI	CCWWGG	3 cut(s)	110, 320, 1756
Esp3I	CGTCTC	2 cut(s)	67, 1787
FaeI	CATG	8 cut(s)	125, 266, 478, 587, 893, 902, 929, 1760
FalI	AAGNNNNNCTT	2 cut(s)	714, 746
FatI	CATG	8 cut(s)	121, 262, 474, 583, 889, 898, 925, 1756
FauI	CCCGC	1 cut(s)	568
FbaI	TGATCA	1 cut(s)	991
FblI	GTMKAC	2 cut(s)	1494, 1533
Fnu4HI	GCNGC	2 cut(s)	116, 172
FokI	GGATG	6 cut(s)	311, 524, 818, 822, 1022, 1398
FriOI	GRGCYC	1 cut(s)	1113
Fsp4HI	GCNGC	2 cut(s)	116, 172
FspAI	RTGCGCAY	1 cut(s)	261
FspBI	CTAG	5 cut(s)	213, 450, 626, 1241, 1305
FspI	TGCGCA	1 cut(s)	261
GlaI	GCGC	2 cut(s)	261, 1417
GluI	GCNGC	2 cut(s)	116, 172
GsuI	CTGGAG	3 cut(s)	151, 670, 834
HaeII	RGCGCY	1 cut(s)	1419
HaeIII	GGCC	4 cut(s)	5, 109, 777, 1428
HapII	CCGG	3 cut(s)	296, 1666, 1845
HgaI	GACGC	3 cut(s)	777, 1061, 1804
HhaI	GCGC	2 cut(s)	262, 1418
Hin1I	GRCGYC	1 cut(s)	1416
Hin1II	CATG	8 cut(s)	125, 266, 478, 587, 893, 902, 929, 1760
Hin6I	GCGC	2 cut(s)	260, 1416
HinP1I	GCGC	2 cut(s)	260, 1416
HincII	GTYRAC	3 cut(s)	1294, 1402, 1495
HindII	GTYRAC	3 cut(s)	1294, 1402, 1495
HindIII	AAGCTT	1 cut(s)	233
HinfI	GANTC	4 cut(s)	221, 629, 872, 1275
HpaI	GTTAAC	1 cut(s)	1294
HpaII	CCGG	3 cut(s)	296, 1666, 1845
HphI	GGTGA	2 cut(s)	526, 1340
Hpy166II	GTNNAC	7 cut(s)	85, 1123, 1176, 1294, 1402, 1495, 1534
Hpy188III	TCNNGA	6 cut(s)	391, 450, 589, 1085, 1241, 1840
Hpy8I	GTNNAC	7 cut(s)	85, 1123, 1176, 1294, 1402, 1495, 1534
Hpy99I	CGWCG	2 cut(s)	149, 202
HpyAV	CCTTC	4 cut(s)	46, 98, 1339, 1400
HpyCH4III	ACNGT	8 cut(s)	78, 136, 202, 538, 1120, 1154, 1852, 1858
HpyCH4IV	ACGT	2 cut(s)	254, 1555
HpyCH4V	TGCA	9 cut(s)	302, 644, 848, 889, 1106, 1150, 1190, 1457, 1928
HpyF10VI	GCNNNNNNNGC	2 cut(s)	115, 1355
HpyF3I	CTNAG	8 cut(s)	71, 180, 1361, 1509, 1543, 1724, 1746, 1773
HpySE526I	ACGT	2 cut(s)	254, 1555
Hsp92I	GRCGYC	1 cut(s)	1416
Hsp92II	CATG	8 cut(s)	125, 266, 478, 587, 893, 902, 929, 1760
HspAI	GCGC	2 cut(s)	260, 1416
KasI	GGCGCC	1 cut(s)	1415
Ksp22I	TGATCA	1 cut(s)	991
KspAI	GTTAAC	1 cut(s)	1294
LguI	GCTCTTC	1 cut(s)	705
LmnI	GCTCC	2 cut(s)	358, 1389
Lsp1109I	GCAGC	2 cut(s)	127, 183
LweI	GCATC	6 cut(s)	289, 780, 844, 1177, 1357, 1444
MaeI	CTAG	5 cut(s)	213, 450, 626, 1241, 1305
MaeII	ACGT	2 cut(s)	254, 1555
MaeIII	GTNAC	4 cut(s)	307, 959, 1678, 1852
MbiI	CCGCTC	1 cut(s)	1577
MfeI	CAATTG	1 cut(s)	849
MflI	RGATCY	3 cut(s)	565, 1243, 1803
MhlI	GDGCHC	3 cut(s)	1113, 1360, 1481
MlsI	TGGCCA	1 cut(s)	109
MluCI	AATT	6 cut(s)	101, 243, 421, 849, 864, 1036
MluNI	TGGCCA	1 cut(s)	109
Mly113I	GGCGCC	1 cut(s)	1416
MmeI	TCCRAC	5 cut(s)	398, 1051, 1303, 1674, 1804
Mox20I	TGGCCA	1 cut(s)	109
Mph1103I	ATGCAT	2 cut(s)	891, 1459
MroXI	GAANNNNTTC	1 cut(s)	290
MscI	TGGCCA	1 cut(s)	109
MseI	TTAA	8 cut(s)	365, 381, 434, 519, 738, 1293, 1443, 1811
MslI	CAYNNNNRTG	2 cut(s)	255, 903
Msp20I	TGGCCA	1 cut(s)	109
MspA1I	CMGCKG	1 cut(s)	174
MspCI	CTTAAG	2 cut(s)	380, 1442
MspI	CCGG	3 cut(s)	296, 1666, 1845
MspR9I	CCNGG	3 cut(s)	296, 803, 1667
MunI	CAATTG	1 cut(s)	849
MvaI	CCWGG	1 cut(s)	803
MwoI	GCNNNNNNNGC	2 cut(s)	115, 1355
NarI	GGCGCC	1 cut(s)	1416
NciI	CCSGG	2 cut(s)	296, 1667
NcoI	CCATGG	1 cut(s)	1756
NlaIII	CATG	8 cut(s)	125, 266, 478, 587, 893, 902, 929, 1760
NlaIV	GGNNCC	5 cut(s)	360, 579, 1417, 1828, 1888
NmuCI	GTSAC	3 cut(s)	307, 959, 1678
NsbI	TGCGCA	1 cut(s)	261
NsiI	ATGCAT	2 cut(s)	891, 1459
NspI	RCATGY	2 cut(s)	266, 893
OliI	CACNNNNGTG	1 cut(s)	255
PciSI	GCTCTTC	1 cut(s)	705
PdmI	GAANNNNTTC	1 cut(s)	290
PfeI	GAWTC	4 cut(s)	221, 629, 872, 1275
PfoI	TCCNGGA	2 cut(s)	294, 801
PkrI	GCNGC	2 cut(s)	117, 173
PluTI	GGCGCC	1 cut(s)	1419
PmaCI	CACGTG	1 cut(s)	255
PmlI	CACGTG	1 cut(s)	255
Ppu21I	YACGTR	1 cut(s)	255
PpuMI	RGGWCCY	2 cut(s)	317, 578
PsiI	TTATAA	1 cut(s)	495
Psp124BI	GAGCTC	1 cut(s)	1113
Psp5II	RGGWCCY	2 cut(s)	317, 578
Psp6I	CCWGG	1 cut(s)	801
PspCI	CACGTG	1 cut(s)	255
PspGI	CCWGG	1 cut(s)	801
PspN4I	GGNNCC	5 cut(s)	360, 579, 1417, 1828, 1888
PspPI	GGNCC	5 cut(s)	176, 317, 578, 1427, 1826
PspPPI	RGGWCCY	2 cut(s)	317, 578
PsuI	RGATCY	3 cut(s)	565, 1243, 1803
RsaI	GTAC	1 cut(s)	1117
RsaNI	GTAC	1 cut(s)	1116
RseI	CAYNNNNRTG	2 cut(s)	255, 903
SacI	GAGCTC	1 cut(s)	1113
SalI	GTCGAC	1 cut(s)	1493
SapI	GCTCTTC	1 cut(s)	705
SaqAI	TTAA	8 cut(s)	365, 381, 434, 519, 738, 1293, 1443, 1811
SatI	GCNGC	2 cut(s)	116, 172
Sau96I	GGNCC	5 cut(s)	176, 317, 578, 1427, 1826
ScrFI	CCNGG	3 cut(s)	296, 803, 1667
SduI	GDGCHC	3 cut(s)	1113, 1360, 1481
SfaNI	GCATC	6 cut(s)	289, 780, 844, 1177, 1357, 1444
SfcI	CTRYAG	1 cut(s)	973
SfoI	GGCGCC	1 cut(s)	1417
SinI	GGWCC	4 cut(s)	176, 317, 578, 1826
SmiMI	CAYNNNNRTG	2 cut(s)	255, 903
SmlI	CTYRAG	2 cut(s)	380, 1442
SmoI	CTYRAG	2 cut(s)	380, 1442
Sse9I	AATT	6 cut(s)	101, 243, 421, 849, 864, 1036
SsiI	CCGC	4 cut(s)	174, 575, 1577, 1817
SspDI	GGCGCC	1 cut(s)	1415
SspMI	CTAG	5 cut(s)	213, 450, 626, 1241, 1305
SstI	GAGCTC	1 cut(s)	1113
StyD4I	CCNGG	3 cut(s)	294, 801, 1665
StyI	CCWWGG	3 cut(s)	110, 320, 1756
TaaI	ACNGT	8 cut(s)	78, 136, 202, 538, 1120, 1154, 1852, 1858
TaiI	ACGT	2 cut(s)	257, 1558
TasI	AATT	6 cut(s)	101, 243, 421, 849, 864, 1036
TfiI	GAWTC	4 cut(s)	221, 629, 872, 1275
Tru1I	TTAA	8 cut(s)	365, 381, 434, 519, 738, 1293, 1443, 1811
Tru9I	TTAA	8 cut(s)	365, 381, 434, 519, 738, 1293, 1443, 1811
TscAI	CASTG	2 cut(s)	961, 1481
TseFI	GTSAC	3 cut(s)	307, 959, 1678
TseI	GCWGC	2 cut(s)	115, 171
Tsp45I	GTSAC	3 cut(s)	307, 959, 1678
TspDTI	ATGAA	6 cut(s)	234, 570, 675, 722, 822, 1049
TspGWI	ACGGA	2 cut(s)	705, 1151
TspRI	CASTG	2 cut(s)	961, 1481
Vha464I	CTTAAG	2 cut(s)	380, 1442
VpaK11BI	GGWCC	4 cut(s)	176, 317, 578, 1826
XapI	RAATTY	2 cut(s)	243, 421
XbaI	TCTAGA	2 cut(s)	449, 1240
XceI	RCATGY	2 cut(s)	266, 893
XcmI	CCANNNNNNNNNTGG	1 cut(s)	809
XmiI	GTMKAC	2 cut(s)	1494, 1533
XmnI	GAANNNNTTC	1 cut(s)	290
XspI	CTAG	5 cut(s)	213, 450, 626, 1241, 1305
Zsp2I	ATGCAT	2 cut(s)	891, 1459

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.