Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0004311

Physical Location & Seq

Genomic Coordinates Forward (+)

67926216 .. 67930024

Gene Structure 3809 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG507500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2013 bp

ATGTTGATTCTTCAGAGAATGGCCTCCTCCTCTTCTCTCCTCTCATCCCCTCTCCTAAAGATCTCTTCTTTCCCCACCCATTTCCTCTCCCCTCTTAAACGCTGCGTTTCGCAACCCACCACCACCGAGTTCAGGGCCTTGGCCCTTTACAGAAATGGAGTCTCCACCTCCGCCGCTGTGGCCACCACAGAGTCTCAGGTTTCGACCCAACACGACAAATTGAAGGAGGCCCAGAAGGAGAAGACTGATAAGCTTGACAAAATTGTGCTTCCTTCCAATGAGTCCTCTGAGAAACTCCTCAGAATTCGCCACACGTGTGCGCATGTTATGGCCATGGCTGTCCAGAAGCTCTTCCCAGATGCCAAAGTGACAATTGGGCCGTGGATAGAGAATGGGTTTTATTATGATTTTGATATGGAGCCTTTGACGGACAAAGAGTTGAAGAGAATCAAGAAGGAGATGGATCGCATCATTGGTAGAAATTTACCACTTGTAAGAGAAGAAGTTTCAAGAGAGGAAGCTCAGCGAAGAATAAGTGCTCTCAACGAACCATACAAACTTGAAATTTTGGATGGTATCAAGGAAGATCCCATTACCATCTACCACATTGGTAATGAATGGTGGGATCTATGTGCGGGGCCTCATGTGGAATATACTGGAAAAATTAACAGAAAAGCTGTCGAACTTGAGTCTATTGCTGGTGCTTACTGGAGAGGTGATGAAAAGAAACCGATGTTGCAGAGGATCTATGGCACTGCATGGGAGAACGAAGAACAATTGCAGGCATACCTTCATTTCAAGGAGGAGGCTAAACGCCGAGATCACAGGCGCCTTGGTCAAGTTCTTGATCTGTTTTCTATACAGAATGATGCTGGCGGGGGTTTAGTGTTCTGGCATCCAAAGGGTGCTATTGTGAGGAATGTAATAGAAGATTTGTGGAAAAAGACACACATAGAGCGTGGTTATGATCTGCTATATACTCCACATGTTGCAAAGGCAGATCTTTGGCAGATAAGTGGTCATCTGGATTATTACAGAGAGAATATGTACAATCAGATGGATGTTGAAGATGAACTTTATCAACTTCGACCAATGAACTGCCCTTATCATATCTTGATTTACAAAAGGAGGCGTCACTCTTATAATGACTTTCCTATTAGAGTTGCTGAGTTGGGAACTGTATATAGATATGAATTGTCTGGAAGCTTACATGGCCTTTTCCGTGTAAGAGGTTTTACTCAGGATGATGCACACATATTTTGTCTAGAAGATCAGATCAAAGATGAAATCAGGGGTGTTCTAGATCTTACGGAAGAGTTATTATTGAAATTTGGCTTCAGCAAATATGAAGTTAATCTCTCGACGAGGCCAGAGAAGTCTGTTGGAGACGATGATATATGGGTGAAAGCAACATCTGCCCTTAGAGATGCCTTGGAGGATAAGGGTTGGAGCTATCAAATTGATGATGGCGGTGGTGCTTTTTATGGCCCAAAGATTGATCTTAAGATTGAGGATGCTCTTGGAAGGAAGTGGCAGTGCTCAACTATACAGGTTGACTTTAACCTACCACAGCGATTTGACATAACATATGTTGACTCAAATTCGGAAAAGAAGCGGCCTATCATGATTCATAGAGCTGTTCTTGGGTCCTTGGAGAGGTTCTTTGGAGTCCTTATAGAGCATTATGCTGGGGATTTTCCATTATGGCTTTCTCCAGTGCAAGCTCATGTTTTACCAGTGACAGACACTCAGCTCGATTACTGCAAAGAGCTGACCAACAAACTGAAAGCAAATGGTATTCGGGGTGAACTTTGCCACGGCGAACGACTGCCAAAACTGATTAGGAATTCAGAGATGCTCAAAATTCCATTAATGGCTGTTGTTGGTGCCAAGGAAGTTGAATCTGGAACTGTTACAGTAAGATCCAGGTCTGGTGAGGATCCAGGGACCATGAGGATTGACGATTTTGTCAGCAGAATCAAGTTAGCCATTGAAAGCAGAACATCATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004812 GO:0004829 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006435 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010467 GO:0016070 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0034645 GO:0034660 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090304 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

HGTP_anticodon tRNA-synt_2b tRNA_SAD

Protein Analysis

670

Amino Acids

77.1

Weight (kDa)

6.5

Isoelectric Point (pI)

42.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA_SAD	PF07973	198 - 250	2.7e-12	Threonyl and Alanyl tRNA synthetase second additional domain
tRNA-synt_2b	PF00587	355 - 562	1.5e-49	tRNA synthetase class II core domain (G, H, P, S and T)
HGTP_anticodon	PF03129	574 - 661	6.8e-18	Anticodon binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004311)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G04842 AT2G04842
fragaria_vesca	FvH4_6g41340 FvH4_6g41340 FvH4_6g41340 FvH4_6g41340 FvH4_6g41340 FvH4_6g41340 FvH4_6g41340
malus_domestica	MD05G1333800.v1.1 MD09G1120400.v1.1 MD17G1111100.v1.1
prunus_persica	Prupe.3G203100_v2.0.a1 Prupe.3G203100_v2.0.a1 Prupe.3G203100_v2.0.a1 Prupe.3G203100_v2.0.a1
pyrus_communis	pycom05g23910 pycom05g24220 pycom05g30420 pycom09g04510 pycom15g36000 pycom17g10340
rosa_chinensis	RchiOBHm_Chr2g0156891
rosa_laevigata	RLG00000020950
rosa_multiflora	Rmu_ssc0000408.1_g000001
rosa_roxburghii	Rroxscaffold_2G00092610
rosa_rugosa	Rorug02G0456900
rosa_samantha	Rh2AG522600 Rh2BG535900 Rh2CG507500 Rh2DG544900
rosa_wichuraiana	Rw2G043160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1143
AasI	GACNNNNNNGTC	1 cut(s)	1967
Acc16I	TGCGCA	1 cut(s)	321
AccB1I	GGYRCC	2 cut(s)	828, 1886
AciI	CCGC	6 cut(s)	171, 174, 635, 876, 1470, 1615
AclWI	GGATC	7 cut(s)	471, 581, 633, 752, 1917, 1934, 1947
AcoI	YGGCCR	2 cut(s)	180, 330
AcsI	RAATTY	7 cut(s)	303, 481, 564, 1328, 1600, 1846, 1863
AcuI	CTGAAG	1 cut(s)	1321
AcvI	CACGTG	1 cut(s)	315
AcyI	GRCGYC	2 cut(s)	829, 1132
AfaI	GTAC	1 cut(s)	1049
AfiI	CCNNNNNNNGG	2 cut(s)	132, 1656
AflII	CTTAAG	1 cut(s)	1502
AflIII	ACRYGT	3 cut(s)	312, 314, 985
AgsI	TTSAA	9 cut(s)	223, 442, 510, 563, 799, 1067, 1327, 1901, 1994
AjnI	CCWGG	2 cut(s)	1925, 1942
AleI	CACNNNNGTG	1 cut(s)	315
Alw21I	GWGCWC	2 cut(s)	541, 1541
Alw26I	GTCTC	3 cut(s)	166, 198, 1380
AlwI	GGATC	7 cut(s)	471, 581, 633, 752, 1917, 1934, 1947
ApeKI	GCWGC	1 cut(s)	102
ApoI	RAATTY	7 cut(s)	303, 481, 564, 1328, 1600, 1846, 1863
AseI	ATTAAT	1 cut(s)	1871
Asp700I	GAANNNNTTC	1 cut(s)	350
AspLEI	GCGC	2 cut(s)	322, 831
AspS9I	GGNCC	8 cut(s)	135, 142, 229, 377, 638, 1487, 1647, 1947
AsuHPI	GGTGA	4 cut(s)	728, 1414, 1817, 1946
AvaII	GGWCC	2 cut(s)	1647, 1947
BalI	TGGCCA	2 cut(s)	182, 332
BamHI	GGATCC	1 cut(s)	1939
BanI	GGYRCC	2 cut(s)	828, 1886
BbrPI	CACGTG	1 cut(s)	315
BbsI	GAAGAC	1 cut(s)	248
Bbv12I	GWGCWC	2 cut(s)	541, 1541
BbvI	GCAGC	1 cut(s)	89
BccI	CCATC	5 cut(s)	454, 566, 605, 1051, 1460
BceAI	ACGGC	2 cut(s)	364, 1834
BciT130I	CCWGG	2 cut(s)	1927, 1944
BcoDI	GTCTC	3 cut(s)	166, 198, 1380
BfaI	CTAG	2 cut(s)	1265, 1301
BfoI	RGCGCY	1 cut(s)	832
BfrI	CTTAAG	1 cut(s)	1502
BglI	GCCNNNNNGGC	1 cut(s)	179
BglII	AGATCT	3 cut(s)	60, 1000, 1303
BisI	GCNGC	3 cut(s)	103, 174, 1616
BlpI	GCTNAGC	1 cut(s)	522
BlsI	GCNGC	3 cut(s)	104, 175, 1617
Bme1390I	CCNGG	2 cut(s)	1927, 1944
Bme18I	GGWCC	2 cut(s)	1647, 1947
BmgT120I	GGNCC	8 cut(s)	135, 142, 229, 377, 638, 1487, 1647, 1947
BmiI	GGNNCC	7 cut(s)	420, 639, 830, 1648, 1888, 1941, 1948
BmrFI	CCNGG	2 cut(s)	1927, 1944
BmsI	GCATC	8 cut(s)	349, 477, 859, 904, 1237, 1417, 1504, 1845
BpiI	GAAGAC	1 cut(s)	248
BpmI	CTGGAG	2 cut(s)	730, 1698
Bpu1102I	GCTNAGC	1 cut(s)	522
BpuEI	CTTGAG	1 cut(s)	707
BsaAI	YACGTR	1 cut(s)	315
BsaHI	GRCGYC	2 cut(s)	829, 1132
BsaJI	CCNNGG	9 cut(s)	138, 333, 380, 832, 1431, 1650, 1816, 1890, 1943
Bsc4I	CCNNNNNNNGG	2 cut(s)	132, 1656
Bse1I	ACTGG	4 cut(s)	661, 713, 1715, 1736
BseBI	CCWGG	2 cut(s)	1927, 1944
BseDI	CCNNGG	9 cut(s)	138, 333, 380, 832, 1431, 1650, 1816, 1890, 1943
BseGI	GGATG	6 cut(s)	44, 577, 895, 1066, 1249, 1519
BseLI	CCNNNNNNNGG	2 cut(s)	132, 1656
BseMII	CTCAG	7 cut(s)	209, 279, 313, 536, 1158, 1253, 1763
BseNI	ACTGG	4 cut(s)	661, 713, 1715, 1736
BseRI	GAGGAG	5 cut(s)	16, 19, 29, 287, 818
BseXI	GCAGC	1 cut(s)	89
BseYI	CCCAGC	1 cut(s)	1688
BshNI	GGYRCC	2 cut(s)	828, 1886
BsiHKAI	GWGCWC	2 cut(s)	541, 1541
BslFI	GGGAC	1 cut(s)	1960
BslI	CCNNNNNNNGG	2 cut(s)	132, 1656
BsmAI	GTCTC	3 cut(s)	166, 198, 1380
BsmBI	CGTCTC	1 cut(s)	1380
BsmFI	GGGAC	1 cut(s)	1960
Bsp1286I	GDGCHC	2 cut(s)	541, 1541
Bsp1407I	TGTACA	1 cut(s)	1047
Bsp1720I	GCTNAGC	1 cut(s)	522
Bsp19I	CCATGG	1 cut(s)	333
BspACI	CCGC	6 cut(s)	171, 174, 635, 876, 1470, 1615
BspCNI	CTCAG	7 cut(s)	208, 280, 312, 535, 1159, 1252, 1762
BspHI	TCATGA	1 cut(s)	1623
BspLI	GGNNCC	7 cut(s)	420, 639, 830, 1648, 1888, 1941, 1948
BspPI	GGATC	7 cut(s)	471, 581, 633, 752, 1917, 1934, 1947
BspQI	GCTCTTC	1 cut(s)	356
BspT107I	GGYRCC	2 cut(s)	828, 1886
BspTI	CTTAAG	1 cut(s)	1502
BsrGI	TGTACA	1 cut(s)	1047
BsrI	ACTGG	4 cut(s)	661, 713, 1715, 1736
BssECI	CCNNGG	9 cut(s)	138, 333, 380, 832, 1431, 1650, 1816, 1890, 1943
BssNI	GRCGYC	2 cut(s)	829, 1132
BssT1I	CCWWGG	6 cut(s)	138, 333, 832, 1431, 1650, 1890
Bst2UI	CCWGG	2 cut(s)	1927, 1944
Bst4CI	ACNGT	3 cut(s)	1180, 1912, 1918
Bst6I	CTCTTC	5 cut(s)	37, 70, 356, 437, 1308
BstACI	GRCGYC	2 cut(s)	829, 1132
BstAFI	CTTAAG	1 cut(s)	1502
BstAPI	GCANNNNNTGC	1 cut(s)	1415
BstAUI	TGTACA	1 cut(s)	1047
BstBAI	YACGTR	1 cut(s)	315
BstC8I	GCNNGC	3 cut(s)	783, 874, 1722
BstDEI	CTNAG	8 cut(s)	195, 288, 299, 522, 1167, 1239, 1421, 1749
BstDSI	CCRYGG	3 cut(s)	333, 380, 1816
BstENI	CCTNNNNNAGG	1 cut(s)	1654
BstF5I	GGATG	6 cut(s)	44, 577, 895, 1066, 1249, 1519
BstH2I	RGCGCY	1 cut(s)	832
BstHHI	GCGC	2 cut(s)	322, 831
BstMAI	GTCTC	3 cut(s)	166, 198, 1380
BstMWI	GCNNNNNNNGC	3 cut(s)	179, 1212, 1415
BstNI	CCWGG	2 cut(s)	1927, 1944
BstNSI	RCATGY	2 cut(s)	326, 989
BstSCI	CCNGG	2 cut(s)	1925, 1942
BstV1I	GCAGC	1 cut(s)	89
BstV2I	GAAGAC	1 cut(s)	248
BstX2I	RGATCY	8 cut(s)	60, 586, 625, 744, 1000, 1303, 1922, 1939
BstYI	RGATCY	8 cut(s)	60, 586, 625, 744, 1000, 1303, 1922, 1939
BtgI	CCRYGG	3 cut(s)	333, 380, 1816
BtsCI	GGATG	6 cut(s)	44, 577, 895, 1066, 1249, 1519
BtsI	GCAGTG	2 cut(s)	753, 1541
BtsIMutI	CAGTG	4 cut(s)	753, 1541, 1722, 1743
Cac8I	GCNNGC	3 cut(s)	783, 874, 1722
CciI	TCATGA	1 cut(s)	1623
CfoI	GCGC	2 cut(s)	322, 831
Cfr13I	GGNCC	8 cut(s)	135, 142, 229, 377, 638, 1487, 1647, 1947
CseI	GACGC	1 cut(s)	1121
Csp6I	GTAC	1 cut(s)	1048
CviAII	CATG	9 cut(s)	323, 334, 644, 759, 986, 1211, 1624, 1727, 1951
CviQI	GTAC	1 cut(s)	1048
DdeI	CTNAG	8 cut(s)	195, 288, 299, 522, 1167, 1239, 1421, 1749
DinI	GGCGCC	1 cut(s)	830
DrdI	GACNNNNNNGTC	1 cut(s)	1967
DseDI	GACNNNNNNGTC	1 cut(s)	1967
EaeI	YGGCCR	2 cut(s)	180, 330
Eam1104I	CTCTTC	5 cut(s)	37, 70, 356, 437, 1308
EarI	CTCTTC	5 cut(s)	37, 70, 356, 437, 1308
EciI	GGCGGA	1 cut(s)	160
Eco130I	CCWWGG	6 cut(s)	138, 333, 832, 1431, 1650, 1890
Eco47I	GGWCC	2 cut(s)	1647, 1947
Eco57I	CTGAAG	1 cut(s)	1321
Eco72I	CACGTG	1 cut(s)	315
EcoNI	CCTNNNNNAGG	1 cut(s)	1654
EcoO109I	RGGNCCY	3 cut(s)	135, 638, 1647
EcoRI	GAATTC	2 cut(s)	303, 1846
EcoRII	CCWGG	2 cut(s)	1925, 1942
EcoT14I	CCWWGG	6 cut(s)	138, 333, 832, 1431, 1650, 1890
EgeI	GGCGCC	1 cut(s)	830
EheI	GGCGCC	1 cut(s)	830
ErhI	CCWWGG	6 cut(s)	138, 333, 832, 1431, 1650, 1890
Esp3I	CGTCTC	1 cut(s)	1380
FaeI	CATG	9 cut(s)	326, 337, 647, 762, 989, 1214, 1627, 1730, 1954
FalI	AAGNNNNNCTT	2 cut(s)	1059, 1091
FaqI	GGGAC	1 cut(s)	1960
FatI	CATG	9 cut(s)	322, 333, 643, 758, 985, 1210, 1623, 1726, 1950
FauI	CCCGC	2 cut(s)	628, 869
FauNDI	CATATG	1 cut(s)	1588
Fnu4HI	GCNGC	3 cut(s)	103, 174, 1616
FokI	GGATG	6 cut(s)	31, 584, 882, 1073, 1256, 1526
Fsp4HI	GCNGC	3 cut(s)	103, 174, 1616
FspAI	RTGCGCAY	1 cut(s)	321
FspBI	CTAG	2 cut(s)	1265, 1301
FspI	TGCGCA	1 cut(s)	321
GlaI	GCGC	2 cut(s)	321, 830
GluI	GCNGC	3 cut(s)	103, 174, 1616
GsaI	CCCAGC	1 cut(s)	1692
GsuI	CTGGAG	2 cut(s)	730, 1698
HaeII	RGCGCY	1 cut(s)	832
HgaI	GACGC	1 cut(s)	1121
HhaI	GCGC	2 cut(s)	322, 831
Hin1I	GRCGYC	2 cut(s)	829, 1132
Hin1II	CATG	9 cut(s)	326, 337, 647, 762, 989, 1214, 1627, 1730, 1954
Hin6I	GCGC	2 cut(s)	320, 829
HinP1I	GCGC	2 cut(s)	320, 829
HincII	GTYRAC	2 cut(s)	1555, 1594
HindII	GTYRAC	2 cut(s)	1555, 1594
HindIII	AAGCTT	2 cut(s)	251, 1204
HphI	GGTGA	4 cut(s)	728, 1414, 1817, 1946
Hpy166II	GTNNAC	3 cut(s)	1555, 1594, 1808
Hpy188I	TCNGA	7 cut(s)	15, 289, 302, 1056, 1275, 1606, 1852
Hpy8I	GTNNAC	3 cut(s)	1555, 1594, 1808
Hpy99I	CGWCG	1 cut(s)	1366
HpyAV	CCTTC	6 cut(s)	217, 229, 282, 448, 800, 1518
HpyCH4III	ACNGT	3 cut(s)	1180, 1912, 1918
HpyCH4IV	ACGT	1 cut(s)	314
HpyCH4V	TGCA	7 cut(s)	739, 758, 781, 992, 1250, 1720, 1764
HpyF10VI	GCNNNNNNNGC	3 cut(s)	179, 1212, 1415
HpyF3I	CTNAG	8 cut(s)	195, 288, 299, 522, 1167, 1239, 1421, 1749
HpySE526I	ACGT	1 cut(s)	314
Hsp92I	GRCGYC	2 cut(s)	829, 1132
Hsp92II	CATG	9 cut(s)	326, 337, 647, 762, 989, 1214, 1627, 1730, 1954
HspAI	GCGC	2 cut(s)	320, 829
KasI	GGCGCC	1 cut(s)	828
LguI	GCTCTTC	1 cut(s)	356
LmnI	GCTCC	2 cut(s)	418, 1449
Lsp1109I	GCAGC	1 cut(s)	89
LweI	GCATC	8 cut(s)	349, 477, 859, 904, 1237, 1417, 1504, 1845
MaeI	CTAG	2 cut(s)	1265, 1301
MaeII	ACGT	1 cut(s)	314
MaeIII	GTNAC	4 cut(s)	367, 1133, 1738, 1912
MfeI	CAATTG	2 cut(s)	372, 776
MflI	RGATCY	8 cut(s)	60, 586, 625, 744, 1000, 1303, 1922, 1939
MhlI	GDGCHC	2 cut(s)	541, 1541
MlsI	TGGCCA	2 cut(s)	182, 332
MluNI	TGGCCA	2 cut(s)	182, 332
Mly113I	GGCGCC	1 cut(s)	829
MlyI	GAGTC	6 cut(s)	168, 200, 290, 698, 1589, 1677
MmeI	TCCRAC	2 cut(s)	1363, 1427
Mox20I	TGGCCA	2 cut(s)	182, 332
MroXI	GAANNNNTTC	1 cut(s)	350
MscI	TGGCCA	2 cut(s)	182, 332
MseI	TTAA	6 cut(s)	96, 666, 1353, 1503, 1560, 1871
MslI	CAYNNNNRTG	1 cut(s)	315
Msp20I	TGGCCA	2 cut(s)	182, 332
MspA1I	CMGCKG	1 cut(s)	176
MspCI	CTTAAG	1 cut(s)	1502
MspR9I	CCNGG	2 cut(s)	1927, 1944
MunI	CAATTG	2 cut(s)	372, 776
MvaI	CCWGG	2 cut(s)	1927, 1944
MwoI	GCNNNNNNNGC	3 cut(s)	179, 1212, 1415
NarI	GGCGCC	1 cut(s)	829
NcoI	CCATGG	1 cut(s)	333
NdeI	CATATG	1 cut(s)	1588
NlaIII	CATG	9 cut(s)	326, 337, 647, 762, 989, 1214, 1627, 1730, 1954
NlaIV	GGNNCC	7 cut(s)	420, 639, 830, 1648, 1888, 1941, 1948
NmeAIII	GCCGAG	1 cut(s)	842
NmuCI	GTSAC	3 cut(s)	367, 1133, 1738
NsbI	TGCGCA	1 cut(s)	321
NspI	RCATGY	2 cut(s)	326, 989
OliI	CACNNNNGTG	1 cut(s)	315
PagI	TCATGA	1 cut(s)	1623
PciI	ACATGT	1 cut(s)	985
PciSI	GCTCTTC	1 cut(s)	356
PdmI	GAANNNNTTC	1 cut(s)	350
PfeI	GAWTC	5 cut(s)	7, 447, 1627, 1901, 1977
PkrI	GCNGC	3 cut(s)	104, 175, 1617
PleI	GAGTC	6 cut(s)	167, 199, 289, 697, 1589, 1676
PluTI	GGCGCC	1 cut(s)	832
PmaCI	CACGTG	1 cut(s)	315
PmlI	CACGTG	1 cut(s)	315
PpsI	GAGTC	6 cut(s)	167, 199, 289, 697, 1589, 1676
Ppu21I	YACGTR	1 cut(s)	315
PpuMI	RGGWCCY	1 cut(s)	1647
PscI	ACATGT	1 cut(s)	985
PshBI	ATTAAT	1 cut(s)	1871
PsiI	TTATAA	1 cut(s)	1143
Psp5II	RGGWCCY	1 cut(s)	1647
Psp6I	CCWGG	2 cut(s)	1925, 1942
PspCI	CACGTG	1 cut(s)	315
PspFI	CCCAGC	1 cut(s)	1688
PspGI	CCWGG	2 cut(s)	1925, 1942
PspN4I	GGNNCC	7 cut(s)	420, 639, 830, 1648, 1888, 1941, 1948
PspPI	GGNCC	8 cut(s)	135, 142, 229, 377, 638, 1487, 1647, 1947
PspPPI	RGGWCCY	1 cut(s)	1647
PsuI	RGATCY	8 cut(s)	60, 586, 625, 744, 1000, 1303, 1922, 1939
RsaI	GTAC	1 cut(s)	1049
RsaNI	GTAC	1 cut(s)	1048
RseI	CAYNNNNRTG	1 cut(s)	315
SapI	GCTCTTC	1 cut(s)	356
SaqAI	TTAA	6 cut(s)	96, 666, 1353, 1503, 1560, 1871
SatI	GCNGC	3 cut(s)	103, 174, 1616
Sau96I	GGNCC	8 cut(s)	135, 142, 229, 377, 638, 1487, 1647, 1947
SchI	GAGTC	6 cut(s)	168, 200, 290, 698, 1589, 1677
ScrFI	CCNGG	2 cut(s)	1927, 1944
SduI	GDGCHC	2 cut(s)	541, 1541
SfaNI	GCATC	8 cut(s)	349, 477, 859, 904, 1237, 1417, 1504, 1845
SfoI	GGCGCC	1 cut(s)	830
SinI	GGWCC	2 cut(s)	1647, 1947
SmiMI	CAYNNNNRTG	1 cut(s)	315
SmlI	CTYRAG	2 cut(s)	686, 1502
SmoI	CTYRAG	2 cut(s)	686, 1502
SsiI	CCGC	6 cut(s)	171, 174, 635, 876, 1470, 1615
SspDI	GGCGCC	1 cut(s)	828
SspMI	CTAG	2 cut(s)	1265, 1301
StyD4I	CCNGG	2 cut(s)	1925, 1942
StyI	CCWWGG	6 cut(s)	138, 333, 832, 1431, 1650, 1890
TaaI	ACNGT	3 cut(s)	1180, 1912, 1918
TaiI	ACGT	1 cut(s)	317
TaqI	TCGA	5 cut(s)	203, 681, 1087, 1361, 1755
TatI	WGTACW	1 cut(s)	1047
TauI	GCSGC	2 cut(s)	176, 1618
TfiI	GAWTC	5 cut(s)	7, 447, 1627, 1901, 1977
Tru1I	TTAA	6 cut(s)	96, 666, 1353, 1503, 1560, 1871
Tru9I	TTAA	6 cut(s)	96, 666, 1353, 1503, 1560, 1871
TscAI	CASTG	4 cut(s)	760, 1541, 1722, 1743
TseFI	GTSAC	3 cut(s)	367, 1133, 1738
TseI	GCWGC	1 cut(s)	102
Tsp45I	GTSAC	3 cut(s)	367, 1133, 1738
TspDTI	ATGAA	9 cut(s)	630, 735, 782, 1086, 1109, 1206, 1299, 1362, 1619
TspGWI	ACGGA	3 cut(s)	443, 1211, 1325
TspRI	CASTG	4 cut(s)	760, 1541, 1722, 1743
Vha464I	CTTAAG	1 cut(s)	1502
VpaK11BI	GGWCC	2 cut(s)	1647, 1947
VspI	ATTAAT	1 cut(s)	1871
XagI	CCTNNNNNAGG	1 cut(s)	1654
XapI	RAATTY	7 cut(s)	303, 481, 564, 1328, 1600, 1846, 1863
XbaI	TCTAGA	2 cut(s)	1264, 1300
XceI	RCATGY	2 cut(s)	326, 989
XmnI	GAANNNNTTC	1 cut(s)	350
XspI	CTAG	2 cut(s)	1265, 1301

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.