Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0004311

Physical Location & Seq

Genomic Coordinates Reverse (-)

14160029 .. 14164569

Gene Structure 4541 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00092610.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2217 bp

ATGGCCACCTCCTCTTCTCTCCTCTCATCCCCTCTCCTAAAGATCTCTTCTTTTCCCACCCATTTCCTCTCCCCTCTTAAACGCTGCGCTTGGCAACCCACCACCGAGTTCAGGGCCTTGGCCCTTTACAGAAATGGAGTCTCTACCTCCGCCGCTGTGGCCACCACAGAGTCTCAGGTTTCGACCCAACACCACAAATTGAAGGAGGCCCAGAAGGAGAAGACCGATAAGCTTGACAAACTTGTGCTTCCTTCCAATGAGTCCTCTGAGAAACTCCTCAGAATTCGCCACACGTGTGCGCATGTTATGGCCATGGCTGTTCAGAAGCTCTTCCCAGATGCGAAAGTGACAATTGGGCCGTGGATAGAGAATGGGTTTTATTATGATTTTGATATGGAGCCTTTGACGGACAAAGAGTTGAAGAGAATCAAGAAGGAGATGGATCGCATCATTGGTAGAAATTTACCACTTGTAAGAGAAGAAGTTTCAAGAGAGGAAGCTCAGCGAAGAATAAGTGCTCTCAACGAACCATACAAACTTGAAATTTTGGATGGTATTAAGGAAGATCCCATTACCATCTACCACATTGGTAATGAATGGTGGGATCTATGTGCGGGGCCTCATGTGGAATATACTGGAAAAATTAACAGAAAAGCTGTCGAACTTGAATCTATTGCTGGTGCTTACTGGAGAGGTGATGAAAAGAAACCAATGTTGCAGAGGATCTATGGCACTGCATGGGAGAACGAAGAACAATTGCAGGCATACCTTCATTTCAAGGAGGAGGCTAAACGCCGAGATCACAGGCGCCTTGGTCAAGTTCTTGATCTGTTTTCTATACAGGTGCTCAGAGTGAATAGCACTGGTGCTCTTCATGCTATTTACGCTGATTTATCAAATGATGCTGGCGGGGGTTTAGTGTTCTGGCATCCAAAGGGTGCTGTTGTGAGGAATGTAATAGAAGATTTGTGGAAAAAGACACACATAGAGCGTGGTTATGATCTGCTATATACTCCACATGTTGCAAAGGCAGATCTTTGGCAGATAAGTGGTCATCTGGATTATTACAGAGAGAATATGTACAATCAGATGGATGTTGAAGATGAACTTTATCAACTTCGACCAATGAACTGCCCTTATCACATCTTGATTTACAAAAGGAGGCGTCACTCTTATAATGACTTTCCTATTAGAGTTGCTGAGTTGGGAACAGTATATAGATATGAATTATCTGGAAGCTTACATGGCCTTTTCCGTGTAAGAGGTTTTACTCAGGATGATGCACACATATTTTGTCTAGAAGATCAGATCAAAGATGAAATCAGGGGTGTTCTAGATCTTACGGAAGAGTTATTATTGAAATTTGGCTTCAGCAAATATGAAGTTAATCTCTCGACGAGGCCAGAGAAGTCTGTTGGAGACGATGATATATGGATGAAAGCAACATATGCCCTTAGAGATGCCTTGGAGGATAAGGGTTGGAGCTATCAAATTGATGATGGCGGTGGTGCTTTTTATGGCCCAAAGATTGATCTTAAGATTGAGGATGCTCTTGGAAGGAAGTGGCAGTGCTCAACTATACAGGCAAGTCCTGAACATAATGAATTTGTTGACTTTAACCTACCACAGCGATTTGACATAACATATGTTGACTCAAATTCGGAAAAGAAGCGGCCTATCATGATTCATAGAGCTGTTCTTGGGTCCTTGGAGAGGTTCTTTGGAGTCCTTATAGAGCATTATGCTGGGGATTTTCCATTATGGCTTTCTCCAGTGCAAGCTCATGTTTTACCAGTGACAGACACTCAGCTCGATTACTGCAAAGAGCTGACCAACAAACTGAAAGCAAATGGTATTCGGGGTGAACTTTGCCACGGCGAACGACTGCCAAAACTGATTAGGAATTCAGAGATGCTCAAAATTCCATTAATGGCTGTTGTTGGTGCCAAGGAAGTTGAATCTGGAACTGTTACAAGGCCCAAGCACGGGCGTTTGAAGGGACGGGTTGGCGGTGCTGCGGTTGTTTGGGGGTTTGATAAGGGATTTGAATTCCTCAACGGATCAATGGGGCTCAGAGGTGGTAGAATCCCACAATCACTTGAGGGAAAGCCTACCGGATCAGCCCACCTATGGCTCTGGTGTTGTGGTCGCACTGAAATGAAGTCAGTGGCGTTGTCAACGGTGGCGATGAAGAATTTTAGGATATATCCCCAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004812 GO:0004829 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006435 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010467 GO:0016070 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0034645 GO:0034660 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090304 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

HGTP_anticodon tRNA-synt_2b tRNA_SAD

Protein Analysis

738

Amino Acids

84.51

Weight (kDa)

7.64

Isoelectric Point (pI)

40.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA_SAD	PF07973	191 - 243	3.1e-12	Threonyl and Alanyl tRNA synthetase second additional domain
tRNA-synt_2b	PF00587	366 - 581	5e-46	tRNA synthetase class II core domain (G, H, P, S and T)
HGTP_anticodon	PF03129	593 - 658	8.4e-12	Anticodon binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004311)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G04842 AT2G04842
fragaria_vesca	FvH4_6g41340 FvH4_6g41340 FvH4_6g41340 FvH4_6g41340 FvH4_6g41340 FvH4_6g41340 FvH4_6g41340
malus_domestica	MD05G1333800.v1.1 MD09G1120400.v1.1 MD17G1111100.v1.1
prunus_persica	Prupe.3G203100_v2.0.a1 Prupe.3G203100_v2.0.a1 Prupe.3G203100_v2.0.a1 Prupe.3G203100_v2.0.a1
pyrus_communis	pycom05g23910 pycom05g24220 pycom05g30420 pycom09g04510 pycom15g36000 pycom17g10340
rosa_chinensis	RchiOBHm_Chr2g0156891
rosa_laevigata	RLG00000020950
rosa_multiflora	Rmu_ssc0000408.1_g000001
rosa_roxburghii	Rroxscaffold_2G00092610
rosa_rugosa	Rorug02G0456900
rosa_samantha	Rh2AG522600 Rh2BG535900 Rh2CG507500 Rh2DG544900
rosa_wichuraiana	Rw2G043160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1176
Acc16I	TGCGCA	1 cut(s)	300
AccB1I	GGYRCC	2 cut(s)	807, 1943
AciI	CCGC	8 cut(s)	150, 153, 614, 909, 1503, 1672, 2010, 2018
AclWI	GGATC	6 cut(s)	450, 560, 612, 731, 2068, 2125
AcoI	YGGCCR	3 cut(s)	3, 159, 309
AcuI	CTGAAG	1 cut(s)	1354
AcvI	CACGTG	1 cut(s)	294
AcyI	GRCGYC	2 cut(s)	808, 1165
AfaI	GTAC	1 cut(s)	1082
AfiI	CCNNNNNNNGG	5 cut(s)	111, 1713, 1985, 1986, 2130
AflII	CTTAAG	1 cut(s)	1535
AflIII	ACRYGT	3 cut(s)	291, 293, 1018
AleI	CACNNNNGTG	1 cut(s)	294
Alw21I	GWGCWC	4 cut(s)	520, 849, 871, 1574
Alw26I	GTCTC	3 cut(s)	145, 177, 1413
AlwI	GGATC	6 cut(s)	450, 560, 612, 731, 2068, 2125
ApeKI	GCWGC	2 cut(s)	84, 2015
AseI	ATTAAT	1 cut(s)	1928
Asp700I	GAANNNNTTC	1 cut(s)	329
AspLEI	GCGC	3 cut(s)	89, 301, 810
AspS9I	GGNCC	8 cut(s)	114, 121, 208, 356, 617, 1520, 1704, 1977
AsuHPI	GGTGA	2 cut(s)	707, 1874
AvaII	GGWCC	1 cut(s)	1704
BalI	TGGCCA	3 cut(s)	5, 161, 311
BanI	GGYRCC	2 cut(s)	807, 1943
BanII	GRGCYC	1 cut(s)	2073
BbrPI	CACGTG	1 cut(s)	294
BbsI	GAAGAC	1 cut(s)	227
Bbv12I	GWGCWC	4 cut(s)	520, 849, 871, 1574
BbvI	GCAGC	2 cut(s)	71, 2002
BccI	CCATC	5 cut(s)	433, 545, 584, 1084, 1493
BceAI	ACGGC	2 cut(s)	343, 1891
BcoDI	GTCTC	3 cut(s)	145, 177, 1413
BfaI	CTAG	2 cut(s)	1298, 1334
BfoI	RGCGCY	1 cut(s)	811
BfrI	CTTAAG	1 cut(s)	1535
BglI	GCCNNNNNGGC	1 cut(s)	158
BglII	AGATCT	3 cut(s)	42, 1033, 1336
BisI	GCNGC	4 cut(s)	85, 153, 1673, 2016
BlpI	GCTNAGC	1 cut(s)	501
BlsI	GCNGC	4 cut(s)	86, 154, 1674, 2017
Bme18I	GGWCC	1 cut(s)	1704
BmgT120I	GGNCC	8 cut(s)	114, 121, 208, 356, 617, 1520, 1704, 1977
BmiI	GGNNCC	5 cut(s)	399, 618, 809, 1705, 1945
BmsI	GCATC	8 cut(s)	328, 456, 892, 937, 1270, 1450, 1537, 1902
BpiI	GAAGAC	1 cut(s)	227
BpmI	CTGGAG	2 cut(s)	709, 1755
Bpu1102I	GCTNAGC	1 cut(s)	501
BpuEI	CTTGAG	1 cut(s)	2120
BsaAI	YACGTR	1 cut(s)	294
BsaHI	GRCGYC	2 cut(s)	808, 1165
BsaJI	CCNNGG	8 cut(s)	117, 312, 359, 811, 1464, 1707, 1873, 1947
BsaWI	WCCGGW	1 cut(s)	2114
Bsc4I	CCNNNNNNNGG	5 cut(s)	111, 1713, 1985, 1986, 2130
Bse1I	ACTGG	5 cut(s)	640, 692, 868, 1772, 1793
BseDI	CCNNGG	8 cut(s)	117, 312, 359, 811, 1464, 1707, 1873, 1947
BseGI	GGATG	7 cut(s)	26, 556, 928, 1099, 1282, 1440, 1552
BseLI	CCNNNNNNNGG	5 cut(s)	111, 1713, 1985, 1986, 2130
BseMII	CTCAG	9 cut(s)	188, 258, 292, 515, 862, 1191, 1286, 1820, 2086
BseNI	ACTGG	5 cut(s)	640, 692, 868, 1772, 1793
BseRI	GAGGAG	3 cut(s)	11, 266, 797
BseXI	GCAGC	2 cut(s)	71, 2002
BseYI	CCCAGC	1 cut(s)	1745
BshNI	GGYRCC	2 cut(s)	807, 1943
BsiHKAI	GWGCWC	4 cut(s)	520, 849, 871, 1574
BsiSI	CCGG	1 cut(s)	2115
BslFI	GGGAC	1 cut(s)	2013
BslI	CCNNNNNNNGG	5 cut(s)	111, 1713, 1985, 1986, 2130
BsmAI	GTCTC	3 cut(s)	145, 177, 1413
BsmBI	CGTCTC	1 cut(s)	1413
BsmFI	GGGAC	1 cut(s)	2013
Bsp1286I	GDGCHC	5 cut(s)	520, 849, 871, 1574, 2073
Bsp1407I	TGTACA	1 cut(s)	1080
Bsp1720I	GCTNAGC	1 cut(s)	501
Bsp19I	CCATGG	1 cut(s)	312
BspACI	CCGC	8 cut(s)	150, 153, 614, 909, 1503, 1672, 2010, 2018
BspCNI	CTCAG	9 cut(s)	187, 259, 291, 514, 861, 1192, 1285, 1819, 2085
BspHI	TCATGA	1 cut(s)	1680
BspLI	GGNNCC	5 cut(s)	399, 618, 809, 1705, 1945
BspPI	GGATC	6 cut(s)	450, 560, 612, 731, 2068, 2125
BspQI	GCTCTTC	2 cut(s)	335, 876
BspT107I	GGYRCC	2 cut(s)	807, 1943
BspTI	CTTAAG	1 cut(s)	1535
BsrGI	TGTACA	1 cut(s)	1080
BsrI	ACTGG	5 cut(s)	640, 692, 868, 1772, 1793
BssECI	CCNNGG	8 cut(s)	117, 312, 359, 811, 1464, 1707, 1873, 1947
BssNI	GRCGYC	2 cut(s)	808, 1165
BssT1I	CCWWGG	6 cut(s)	117, 312, 811, 1464, 1707, 1947
Bst4CI	ACNGT	3 cut(s)	1213, 1969, 2182
Bst6I	CTCTTC	6 cut(s)	19, 52, 335, 416, 876, 1341
BstACI	GRCGYC	2 cut(s)	808, 1165
BstAFI	CTTAAG	1 cut(s)	1535
BstAPI	GCANNNNNTGC	1 cut(s)	1448
BstAUI	TGTACA	1 cut(s)	1080
BstBAI	YACGTR	1 cut(s)	294
BstC8I	GCNNGC	3 cut(s)	762, 907, 1779
BstDSI	CCRYGG	3 cut(s)	312, 359, 1873
BstENI	CCTNNNNNAGG	1 cut(s)	1711
BstF5I	GGATG	7 cut(s)	26, 556, 928, 1099, 1282, 1440, 1552
BstH2I	RGCGCY	1 cut(s)	811
BstHHI	GCGC	3 cut(s)	89, 301, 810
BstMAI	GTCTC	3 cut(s)	145, 177, 1413
BstMWI	GCNNNNNNNGC	5 cut(s)	158, 875, 884, 1245, 1448
BstNSI	RCATGY	2 cut(s)	305, 1022
BstV1I	GCAGC	2 cut(s)	71, 2002
BstV2I	GAAGAC	1 cut(s)	227
BstX2I	RGATCY	6 cut(s)	42, 565, 604, 723, 1033, 1336
BstYI	RGATCY	6 cut(s)	42, 565, 604, 723, 1033, 1336
BtgI	CCRYGG	3 cut(s)	312, 359, 1873
BtgZI	GCGATG	1 cut(s)	2201
BtsCI	GGATG	7 cut(s)	26, 556, 928, 1099, 1282, 1440, 1552
BtsI	GCAGTG	2 cut(s)	732, 1574
BtsIMutI	CAGTG	7 cut(s)	732, 861, 1574, 1779, 1800, 2151, 2172
Cac8I	GCNNGC	3 cut(s)	762, 907, 1779
CciI	TCATGA	1 cut(s)	1680
CfoI	GCGC	3 cut(s)	89, 301, 810
Cfr13I	GGNCC	8 cut(s)	114, 121, 208, 356, 617, 1520, 1704, 1977
CseI	GACGC	1 cut(s)	1154
Csp6I	GTAC	1 cut(s)	1081
CviAII	CATG	9 cut(s)	302, 313, 623, 738, 875, 1019, 1244, 1681, 1784
CviQI	GTAC	1 cut(s)	1081
DinI	GGCGCC	1 cut(s)	809
EaeI	YGGCCR	3 cut(s)	3, 159, 309
Eam1104I	CTCTTC	6 cut(s)	19, 52, 335, 416, 876, 1341
EarI	CTCTTC	6 cut(s)	19, 52, 335, 416, 876, 1341
EciI	GGCGGA	1 cut(s)	139
Eco130I	CCWWGG	6 cut(s)	117, 312, 811, 1464, 1707, 1947
Eco24I	GRGCYC	1 cut(s)	2073
Eco47I	GGWCC	1 cut(s)	1704
Eco57I	CTGAAG	1 cut(s)	1354
Eco72I	CACGTG	1 cut(s)	294
EcoNI	CCTNNNNNAGG	1 cut(s)	1711
EcoO109I	RGGNCCY	3 cut(s)	114, 617, 1704
EcoRI	GAATTC	3 cut(s)	282, 1903, 2048
EcoT14I	CCWWGG	6 cut(s)	117, 312, 811, 1464, 1707, 1947
EcoT38I	GRGCYC	1 cut(s)	2073
EgeI	GGCGCC	1 cut(s)	809
EheI	GGCGCC	1 cut(s)	809
ErhI	CCWWGG	6 cut(s)	117, 312, 811, 1464, 1707, 1947
Esp3I	CGTCTC	1 cut(s)	1413
FaeI	CATG	9 cut(s)	305, 316, 626, 741, 878, 1022, 1247, 1684, 1787
FalI	AAGNNNNNCTT	2 cut(s)	1092, 1124
FaqI	GGGAC	1 cut(s)	2013
FatI	CATG	9 cut(s)	301, 312, 622, 737, 874, 1018, 1243, 1680, 1783
FauI	CCCGC	2 cut(s)	607, 902
FauNDI	CATATG	2 cut(s)	1447, 1645
Fnu4HI	GCNGC	4 cut(s)	85, 153, 1673, 2016
FokI	GGATG	7 cut(s)	13, 563, 915, 1106, 1289, 1447, 1559
FriOI	GRGCYC	1 cut(s)	2073
Fsp4HI	GCNGC	4 cut(s)	85, 153, 1673, 2016
FspAI	RTGCGCAY	1 cut(s)	300
FspBI	CTAG	2 cut(s)	1298, 1334
FspI	TGCGCA	1 cut(s)	300
GlaI	GCGC	3 cut(s)	88, 300, 809
GluI	GCNGC	4 cut(s)	85, 153, 1673, 2016
GsaI	CCCAGC	1 cut(s)	1749
GsuI	CTGGAG	2 cut(s)	709, 1755
HaeII	RGCGCY	1 cut(s)	811
HapII	CCGG	1 cut(s)	2115
HgaI	GACGC	1 cut(s)	1154
HhaI	GCGC	3 cut(s)	89, 301, 810
Hin1I	GRCGYC	2 cut(s)	808, 1165
Hin1II	CATG	9 cut(s)	305, 316, 626, 741, 878, 1022, 1247, 1684, 1787
Hin6I	GCGC	3 cut(s)	87, 299, 808
HinP1I	GCGC	3 cut(s)	87, 299, 808
HincII	GTYRAC	3 cut(s)	1612, 1651, 2178
HindII	GTYRAC	3 cut(s)	1612, 1651, 2178
HindIII	AAGCTT	2 cut(s)	230, 1237
HpaII	CCGG	1 cut(s)	2115
HphI	GGTGA	2 cut(s)	707, 1874
Hpy166II	GTNNAC	4 cut(s)	1612, 1651, 1865, 2178
Hpy188I	TCNGA	9 cut(s)	268, 281, 324, 851, 1089, 1308, 1663, 1909, 2075
Hpy8I	GTNNAC	4 cut(s)	1612, 1651, 1865, 2178
Hpy99I	CGWCG	1 cut(s)	1399
HpyAV	CCTTC	7 cut(s)	196, 208, 261, 427, 779, 1551, 1990
HpyCH4III	ACNGT	3 cut(s)	1213, 1969, 2182
HpyCH4IV	ACGT	1 cut(s)	293
HpyCH4V	TGCA	7 cut(s)	718, 737, 760, 1025, 1283, 1777, 1821
HpyF10VI	GCNNNNNNNGC	5 cut(s)	158, 875, 884, 1245, 1448
HpySE526I	ACGT	1 cut(s)	293
Hsp92I	GRCGYC	2 cut(s)	808, 1165
Hsp92II	CATG	9 cut(s)	305, 316, 626, 741, 878, 1022, 1247, 1684, 1787
HspAI	GCGC	3 cut(s)	87, 299, 808
KasI	GGCGCC	1 cut(s)	807
LguI	GCTCTTC	2 cut(s)	335, 876
LmnI	GCTCC	2 cut(s)	397, 1482
Lsp1109I	GCAGC	2 cut(s)	71, 2002
LweI	GCATC	8 cut(s)	328, 456, 892, 937, 1270, 1450, 1537, 1902
MaeI	CTAG	2 cut(s)	1298, 1334
MaeII	ACGT	1 cut(s)	293
MaeIII	GTNAC	4 cut(s)	346, 1166, 1795, 1969
MfeI	CAATTG	2 cut(s)	351, 755
MflI	RGATCY	6 cut(s)	42, 565, 604, 723, 1033, 1336
MhlI	GDGCHC	5 cut(s)	520, 849, 871, 1574, 2073
MlsI	TGGCCA	3 cut(s)	5, 161, 311
MluNI	TGGCCA	3 cut(s)	5, 161, 311
Mly113I	GGCGCC	1 cut(s)	808
MlyI	GAGTC	5 cut(s)	147, 179, 269, 1646, 1734
MmeI	TCCRAC	2 cut(s)	1396, 1460
Mox20I	TGGCCA	3 cut(s)	5, 161, 311
MroXI	GAANNNNTTC	1 cut(s)	329
MscI	TGGCCA	3 cut(s)	5, 161, 311
MseI	TTAA	7 cut(s)	78, 558, 645, 1386, 1536, 1617, 1928
MslI	CAYNNNNRTG	2 cut(s)	294, 2156
Msp20I	TGGCCA	3 cut(s)	5, 161, 311
MspA1I	CMGCKG	1 cut(s)	155
MspCI	CTTAAG	1 cut(s)	1535
MspI	CCGG	1 cut(s)	2115
MunI	CAATTG	2 cut(s)	351, 755
MwoI	GCNNNNNNNGC	5 cut(s)	158, 875, 884, 1245, 1448
NarI	GGCGCC	1 cut(s)	808
NcoI	CCATGG	1 cut(s)	312
NdeI	CATATG	2 cut(s)	1447, 1645
NlaIII	CATG	9 cut(s)	305, 316, 626, 741, 878, 1022, 1247, 1684, 1787
NlaIV	GGNNCC	5 cut(s)	399, 618, 809, 1705, 1945
NmeAIII	GCCGAG	1 cut(s)	821
NmuCI	GTSAC	3 cut(s)	346, 1166, 1795
NsbI	TGCGCA	1 cut(s)	300
NspI	RCATGY	2 cut(s)	305, 1022
OliI	CACNNNNGTG	1 cut(s)	294
PagI	TCATGA	1 cut(s)	1680
PciI	ACATGT	1 cut(s)	1018
PciSI	GCTCTTC	2 cut(s)	335, 876
PdmI	GAANNNNTTC	1 cut(s)	329
PfeI	GAWTC	5 cut(s)	426, 668, 1684, 1958, 2085
PkrI	GCNGC	4 cut(s)	86, 154, 1674, 2017
PleI	GAGTC	5 cut(s)	146, 178, 268, 1646, 1733
PluTI	GGCGCC	1 cut(s)	811
PmaCI	CACGTG	1 cut(s)	294
PmlI	CACGTG	1 cut(s)	294
PpsI	GAGTC	5 cut(s)	146, 178, 268, 1646, 1733
Ppu21I	YACGTR	1 cut(s)	294
PpuMI	RGGWCCY	1 cut(s)	1704
PscI	ACATGT	1 cut(s)	1018
PshBI	ATTAAT	1 cut(s)	1928
PsiI	TTATAA	1 cut(s)	1176
Psp5II	RGGWCCY	1 cut(s)	1704
PspCI	CACGTG	1 cut(s)	294
PspFI	CCCAGC	1 cut(s)	1745
PspN4I	GGNNCC	5 cut(s)	399, 618, 809, 1705, 1945
PspPI	GGNCC	8 cut(s)	114, 121, 208, 356, 617, 1520, 1704, 1977
PspPPI	RGGWCCY	1 cut(s)	1704
PsuI	RGATCY	6 cut(s)	42, 565, 604, 723, 1033, 1336
RsaI	GTAC	1 cut(s)	1082
RsaNI	GTAC	1 cut(s)	1081
RseI	CAYNNNNRTG	2 cut(s)	294, 2156
SapI	GCTCTTC	2 cut(s)	335, 876
SaqAI	TTAA	7 cut(s)	78, 558, 645, 1386, 1536, 1617, 1928
SatI	GCNGC	4 cut(s)	85, 153, 1673, 2016
Sau96I	GGNCC	8 cut(s)	114, 121, 208, 356, 617, 1520, 1704, 1977
SchI	GAGTC	5 cut(s)	147, 179, 269, 1646, 1734
SduI	GDGCHC	5 cut(s)	520, 849, 871, 1574, 2073
SfaNI	GCATC	8 cut(s)	328, 456, 892, 937, 1270, 1450, 1537, 1902
SfoI	GGCGCC	1 cut(s)	809
SinI	GGWCC	1 cut(s)	1704
SmiMI	CAYNNNNRTG	2 cut(s)	294, 2156
SmlI	CTYRAG	2 cut(s)	1535, 2099
SmoI	CTYRAG	2 cut(s)	1535, 2099
SsiI	CCGC	8 cut(s)	150, 153, 614, 909, 1503, 1672, 2010, 2018
SspDI	GGCGCC	1 cut(s)	807
SspMI	CTAG	2 cut(s)	1298, 1334
StyI	CCWWGG	6 cut(s)	117, 312, 811, 1464, 1707, 1947
TaaI	ACNGT	3 cut(s)	1213, 1969, 2182
TaiI	ACGT	1 cut(s)	296
TaqI	TCGA	5 cut(s)	182, 660, 1120, 1394, 1812
TaqII	GACCGA	1 cut(s)	239
TatI	WGTACW	1 cut(s)	1080
TauI	GCSGC	2 cut(s)	155, 1675
TfiI	GAWTC	5 cut(s)	426, 668, 1684, 1958, 2085
Tru1I	TTAA	7 cut(s)	78, 558, 645, 1386, 1536, 1617, 1928
Tru9I	TTAA	7 cut(s)	78, 558, 645, 1386, 1536, 1617, 1928
TscAI	CASTG	7 cut(s)	739, 868, 1574, 1779, 1800, 2158, 2172
TseFI	GTSAC	3 cut(s)	346, 1166, 1795
TseI	GCWGC	2 cut(s)	84, 2015
Tsp45I	GTSAC	3 cut(s)	346, 1166, 1795
TspGWI	ACGGA	4 cut(s)	422, 1244, 1358, 2073
TspRI	CASTG	7 cut(s)	739, 868, 1574, 1779, 1800, 2158, 2172
Vha464I	CTTAAG	1 cut(s)	1535
VpaK11BI	GGWCC	1 cut(s)	1704
VspI	ATTAAT	1 cut(s)	1928
XagI	CCTNNNNNAGG	1 cut(s)	1711
XbaI	TCTAGA	2 cut(s)	1297, 1333
XceI	RCATGY	2 cut(s)	305, 1022
XmnI	GAANNNNTTC	1 cut(s)	329
XspI	CTAG	2 cut(s)	1298, 1334

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.