AT2G06925

phospholipase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
2842020 .. 2843386
1367 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G06925.1

Sequence Viewer

Length: 447 bp
ATGGCGGCTCCGATCATACTTTTCTCTTTCCTTTTATTCTTCTCTGTCTCTGTCTCGGCACTTAACGTCGGTGTTCAGCTCATACATCCCTCCATTTCCTTGACTAAAGAATGTAGCCGGAAATGTGAATCAGAGTTTTGTTCAGTGCCTCCATTTCTGAGGTATGGGAAGTACTGTGGACTACTTTACAGTGGATGTCCTGGTGAGAGACCTTGTGATGGTCTTGATTCTTGTTGCATGAAACATGATGCTTGTGTCCAATCCAAGAATAATGATTATCTAAGCCAAGAGTGTAGTCAGAAGTTCATTAACTGCATGAACAATTTCAGCCAGAAGAAGCAACCGACGTTCAAAGGTAACAAATGCGACGCTGATGAAGTGATTGATGTCATCTCCATTGTCATGGAAGCTGCTCTTATCGCCGGCAAAGTCCTCAAGAAACCCTAA

Protein Analysis

148

Amino Acids

16.32

Weight (kDa)

7.95

Isoelectric Point (pI)

49.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 5
AfaI GTAC 1 cut(s) 173
AfiI CCNNNNNNNGG 1 cut(s) 218
AgsI TTSAA 1 cut(s) 352
AjnI CCWGG 1 cut(s) 199
AluBI AGCT 2 cut(s) 79, 410
AluI AGCT 2 cut(s) 79, 410
Alw26I GTCTC 3 cut(s) 52, 58, 202
ApeKI GCWGC 1 cut(s) 410
Asp700I GAANNNNTTC 1 cut(s) 323
AsuHPI GGTGA 1 cut(s) 215
BbvI GCAGC 1 cut(s) 397
BccI CCATC 1 cut(s) 212
BciT130I CCWGG 1 cut(s) 201
BcoDI GTCTC 3 cut(s) 52, 58, 202
BisI GCNGC 2 cut(s) 6, 411
BlsI GCNGC 2 cut(s) 7, 412
BmcAI AGTACT 1 cut(s) 173
Bme1390I CCNGG 1 cut(s) 201
BmiI GGNNCC 1 cut(s) 9
BmrFI CCNGG 1 cut(s) 201
BmsI GCATC 1 cut(s) 238
BpuEI CTTGAG 1 cut(s) 419
BsaI GGTCTC 1 cut(s) 202
Bsc4I CCNNNNNNNGG 1 cut(s) 218
Bse118I RCCGGY 1 cut(s) 422
BseBI CCWGG 1 cut(s) 201
BseGI GGATG 2 cut(s) 85, 200
BseLI CCNNNNNNNGG 1 cut(s) 218
BseMII CTCAG 1 cut(s) 149
BseXI GCAGC 1 cut(s) 397
BsiSI CCGG 2 cut(s) 118, 423
BslI CCNNNNNNNGG 1 cut(s) 218
BsmAI GTCTC 3 cut(s) 52, 58, 202
Bso31I GGTCTC 1 cut(s) 202
Bsp143I GATC 1 cut(s) 12
BspACI CCGC 1 cut(s) 5
BspCNI CTCAG 1 cut(s) 150
BspLI GGNNCC 1 cut(s) 9
BspTNI GGTCTC 1 cut(s) 202
BsrFI RCCGGY 1 cut(s) 422
BssAI RCCGGY 1 cut(s) 422
BssMI GATC 1 cut(s) 12
Bst2UI CCWGG 1 cut(s) 201
Bst4CI ACNGT 2 cut(s) 176, 191
BstC8I GCNNGC 1 cut(s) 424
BstDEI CTNAG 2 cut(s) 158, 281
BstF5I GGATG 2 cut(s) 85, 200
BstKTI GATC 1 cut(s) 15
BstMAI GTCTC 3 cut(s) 52, 58, 202
BstMBI GATC 1 cut(s) 12
BstMWI GCNNNNNNNGC 1 cut(s) 419
BstNI CCWGG 1 cut(s) 201
BstSCI CCNGG 1 cut(s) 199
BstV1I GCAGC 1 cut(s) 397
BstXI CCANNNNNNTGG 1 cut(s) 403
BtsCI GGATG 2 cut(s) 85, 200
BtsIMutI CAGTG 2 cut(s) 150, 196
Cac8I GCNNGC 1 cut(s) 424
Cfr10I RCCGGY 1 cut(s) 422
CseI GACGC 1 cut(s) 377
Csp6I GTAC 1 cut(s) 172
CviAII CATG 4 cut(s) 238, 245, 316, 403
CviJI RGCY 6 cut(s) 8, 79, 117, 285, 330, 410
CviKI_1 RGCY 6 cut(s) 8, 79, 117, 285, 330, 410
CviQI GTAC 1 cut(s) 172
DdeI CTNAG 2 cut(s) 158, 281
DpnI GATC 1 cut(s) 14
DpnII GATC 1 cut(s) 12
Eco31I GGTCTC 1 cut(s) 202
EcoRII CCWGG 1 cut(s) 199
FaeI CATG 4 cut(s) 241, 248, 319, 406
FaiI YATR 7 cut(s) 17, 83, 165, 239, 246, 317, 404
FalI AAGNNNNNCTT 2 cut(s) 399, 431
FatI CATG 4 cut(s) 237, 244, 315, 402
Fnu4HI GCNGC 2 cut(s) 6, 411
FokI GGATG 2 cut(s) 72, 207
Fsp4HI GCNGC 2 cut(s) 6, 411
GluI GCNGC 2 cut(s) 6, 411
HapII CCGG 2 cut(s) 118, 423
HgaI GACGC 1 cut(s) 377
Hin1II CATG 4 cut(s) 241, 248, 319, 406
HinfI GANTC 2 cut(s) 128, 227
HpaII CCGG 2 cut(s) 118, 423
HphI GGTGA 1 cut(s) 215
Hpy166II GTNNAC 1 cut(s) 179
Hpy188I TCNGA 4 cut(s) 12, 133, 159, 300
Hpy188III TCNNGA 2 cut(s) 224, 436
Hpy8I GTNNAC 1 cut(s) 179
Hpy99I CGWCG 3 cut(s) 71, 349, 371
HpyCH4III ACNGT 2 cut(s) 176, 191
HpyCH4IV ACGT 2 cut(s) 66, 347
HpyCH4V TGCA 2 cut(s) 237, 315
HpyF10VI GCNNNNNNNGC 1 cut(s) 419
HpyF3I CTNAG 2 cut(s) 158, 281
HpySE526I ACGT 2 cut(s) 66, 347
Hsp92II CATG 4 cut(s) 241, 248, 319, 406
KroI GCCGGC 1 cut(s) 422
KroNI GCCGGC 1 cut(s) 424
Kzo9I GATC 1 cut(s) 12
LmnI GCTCC 1 cut(s) 13
LpnPI CCDG 5 cut(s) 131, 186, 213, 344, 436
Lsp1109I GCAGC 1 cut(s) 397
LweI GCATC 1 cut(s) 238
MaeII ACGT 2 cut(s) 66, 347
MaeIII GTNAC 1 cut(s) 356
MalI GATC 1 cut(s) 14
MboI GATC 1 cut(s) 12
MboII GAAGA 2 cut(s) 31, 346
MluCI AATT 1 cut(s) 322
MnlI CCTC 4 cut(s) 100, 153, 159, 443
MroNI GCCGGC 1 cut(s) 422
MroXI GAANNNNTTC 1 cut(s) 323
MseI TTAA 2 cut(s) 63, 309
MslI CAYNNNNRTG 1 cut(s) 401
MspI CCGG 2 cut(s) 118, 423
MspR9I CCNGG 1 cut(s) 201
MvaI CCWGG 1 cut(s) 201
MwoI GCNNNNNNNGC 1 cut(s) 419
NaeI GCCGGC 1 cut(s) 424
NdeII GATC 1 cut(s) 12
NgoMIV GCCGGC 1 cut(s) 422
NlaIII CATG 4 cut(s) 241, 248, 319, 406
NlaIV GGNNCC 1 cut(s) 9
NmeAIII GCCGAG 1 cut(s) 35
PdiI GCCGGC 1 cut(s) 424
PdmI GAANNNNTTC 1 cut(s) 323
PfeI GAWTC 2 cut(s) 128, 227
PkrI GCNGC 2 cut(s) 7, 412
Psp6I CCWGG 1 cut(s) 199
PspGI CCWGG 1 cut(s) 199
PspN4I GGNNCC 1 cut(s) 9
RsaI GTAC 1 cut(s) 173
RsaNI GTAC 1 cut(s) 172
RseI CAYNNNNRTG 1 cut(s) 401
SaqAI TTAA 2 cut(s) 63, 309
SatI GCNGC 2 cut(s) 6, 411
Sau3AI GATC 1 cut(s) 12
ScaI AGTACT 1 cut(s) 173
ScrFI CCNGG 1 cut(s) 201
SetI ASST 7 cut(s) 69, 81, 164, 214, 350, 358, 412
SfaNI GCATC 1 cut(s) 238
SmiMI CAYNNNNRTG 1 cut(s) 401
SmlI CTYRAG 1 cut(s) 434
SmoI CTYRAG 1 cut(s) 434
Sse9I AATT 1 cut(s) 322
SsiI CCGC 1 cut(s) 5
StyD4I CCNGG 1 cut(s) 199
TaaI ACNGT 2 cut(s) 176, 191
TaiI ACGT 2 cut(s) 69, 350
TasI AATT 1 cut(s) 322
TatI WGTACW 1 cut(s) 171
TauI GCSGC 1 cut(s) 8
TfiI GAWTC 2 cut(s) 128, 227
Tru1I TTAA 2 cut(s) 63, 309
Tru9I TTAA 2 cut(s) 63, 309
TscAI CASTG 2 cut(s) 150, 196
TseI GCWGC 1 cut(s) 410
TspDTI ATGAA 4 cut(s) 254, 295, 332, 390
TspRI CASTG 2 cut(s) 150, 196
XmnI GAANNNNTTC 1 cut(s) 323
ZrmI AGTACT 1 cut(s) 173
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.