AT2G17190

Ubiquitin domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0010891
Physical Location & Seq
Reverse (-)
7477845 .. 7481690
3846 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G17190.1

Sequence Viewer

Length: 1617 bp
ATGGGTGGTGAAGCAGATTCGAGGCAGCCGCTGACTGCTGAAGGCGTAGCTGTTGCCGTGAACGTCAGATGCTCCAATGGCACGAAATTTAGTGTGACGACGAGCCTCGATTCCACGGTGGAGTCTTTCAAAGAGTTAATTGCGCAGAACAGCGATGTGCCGGCAAATCAGCAGCGTTTGATTTACAAGGGACGTATCCTCAAAGACGATCAGACTCTCCTCAGCTATGGTTTGCAGGCTGATCACACCGTTCATATGGTTCGAGGTTTTGTGCCTTCTTCTCCTTCTGCTCCCGCTGCAAATGCTGGAAACCAAACCACTGCTCCTCAAGCGGTTGGTTCAAATGATAGCTCAAACCTCGGAGGAGGTGAATCTTTGTTCCCTGGCCTTGGATTTAATCCTTTGGGTGGTGGAAATGCTATGGCTGGATTATTTGGATCTGGTCTTCCTGATCTTGAGCAGGCACAGCAACAACTAGCTCAGAACCCTAACATGATTAGAGAGATGATGAATACTCCAGCCATCCAGAATCTTATGAACAACCCAGAATTTATGAGGAGTATGATTATGAATAACCCTCAAATGCGTGAGCTTGTAGATCGCAATCCTGAGCTTGGTCATGTGCTCAATGACCCAAGCATCCTTCGTCAAACTCTAGAAGCGGCGAGAAACCCAGAGCTTATGCGTGAAATGATGAGAAATACTGATAGGGCTATGAGTAATATTGAGTCTATGCCTGAGGGATTTAACATGCTTAGGCGTATGTATGAAAATGTCCAGGAACCGTTAATGAATGCTACCACTATGTCCGAGAATGCTGGAAACAATACGAGCTCTAATCCATTTGCTGCTCTTCTGGGAAACCAGGGGGTTACTACACAAGGAAGCGATACTTCTAATAATATTTCGGCACCGAATGCTGAAACGGGTACACCTAATGCAAATCCACTTCCTAATCCTTGGGGTGCCACGGCTGGCCAGACAACTGCCCCTGGAAGGACAAATGCTGGACTTGGTGGTCTTGGTGGGCTTGGAGGCCTTGGTGGACTCGGTATGCTGGGAGCGGACTCACCTCTTGGTGCGACTCCAGATGCTTCTCAATTGAGCCAAATACTGCAAAACCCCGCTATGTCGCAGATGATGCAAAGCGTACTTTCCAATCCACAGTACATGAATCAGCTTATGAGTCTTAACCCACAACTCCGAAGCATGCTAGATATGAATCCTCAGTTGAGGGAAATGATGCAGAACCCTGATTTCCTTCGCCAGTTTAGCTCTCCCGAGATGATGCAGCAAATGATGTCTCTACAACAATCACTTTTCTCTCAGAATAGGAACACGGCTGGCCAGGATCCTACGCAAACTGGTGCTGCGACAGGGACAGCCAATAACGGAGGACTAGATTTATTGATGAATATGTTTGGCAGCCTTGGTGCTGGCGGCCTAAGTGGCACAAACCAACCCAATGTTCCTCCTGAAGAGCGATTTGCGACTCAGTTGCAACAGTTGCAAGAAATGGGATTCTACGACAGAGCAGAGAACATAAGGGCTTTGCTTGCAACCAATGGTAACGTTAACGCTGCTGTAGAACGACTCTTGGGGAGTATTGGCCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000045 GO:0001666 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005773 GO:0005776 GO:0005783 GO:0005829 GO:0005886 GO:0006508 GO:0006511 GO:0006807 GO:0006914 GO:0006950 GO:0006996 GO:0007033 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009628 GO:0009893 GO:0009894 GO:0009896 GO:0009966 GO:0009987 GO:0010033 GO:0010243 GO:0010498 GO:0010604 GO:0010646 GO:0010941 GO:0010959 GO:0012505 GO:0016020 GO:0016043 GO:0016234 GO:0016235 GO:0016236 GO:0019222 GO:0019538 GO:0019899 GO:0019900 GO:0019941 GO:0022411 GO:0022607 GO:0022898 GO:0023051 GO:0030162 GO:0030163 GO:0030433 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031396 GO:0031398 GO:0031399 GO:0031401 GO:0031593 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032409 GO:0032410 GO:0032412 GO:0032413 GO:0032434 GO:0032436 GO:0032879 GO:0032984 GO:0032991 GO:0033554 GO:0034762 GO:0034763 GO:0034765 GO:0034766 GO:0034976 GO:0035973 GO:0036293 GO:0036294 GO:0036503 GO:0042176 GO:0042221 GO:0042802 GO:0042981 GO:0043067 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043269 GO:0043271 GO:0043632 GO:0043933 GO:0044085 GO:0044092 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045732 GO:0045862 GO:0048471 GO:0048518 GO:0048519 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051051 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051603 GO:0051716 GO:0051924 GO:0051926 GO:0060255 GO:0061136 GO:0061912 GO:0061919 GO:0065007 GO:0065009 GO:0070013 GO:0070482 GO:0070887 GO:0070925 GO:0071453 GO:0071456 GO:0071704 GO:0071840 GO:0071944 GO:0080090 GO:0080134 GO:0080135 GO:0097352 GO:0140030 GO:1900407 GO:1901019 GO:1901020 GO:1901339 GO:1901340 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1901800 GO:1902175 GO:1902531 GO:1902882 GO:1903050 GO:1903052 GO:1903069 GO:1903071 GO:1903169 GO:1903170 GO:1903201 GO:1903320 GO:1903322 GO:1903362 GO:1903364 GO:1904062 GO:1904063 GO:1904292 GO:1904294 GO:1905037 GO:1905897 GO:1905898 GO:2000058 GO:2000060 GO:2001233 GO:2001242 GO:2001257 GO:2001258
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
UBA ubiquitin

Protein Analysis

538

Amino Acids

57.28

Weight (kDa)

4.69

Isoelectric Point (pI)

47.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ubiquitin PF00240 20 - 87 8.9e-23 Ubiquitin family
Rad60-SLD PF11976 20 - 87 3.7e-08 Ubiquitin-2 like Rad60 SUMO-like
UBQLN1 PF23195 158 - 283 5.8e-51 Ubiquilin-1-like domain
UBQLN1 PF23195 367 - 443 5.4e-12 Ubiquilin-1-like domain
UBA PF00627 498 - 532 4.5e-10 UBA/TS-N domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0010891)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G17190 AT2G17200
fragaria_vesca FvH4_2g16610 FvH4_2g16610
malus_domestica MD05G1134300.v1.1 MD10G1139400.v1.1
prunus_persica Prupe.8G178100_v2.0.a1
pyrus_communis pycom05g13090 pycom10g11840
rosa_chinensis RchiOBHm_Chr6g0280671
rosa_laevigata RLG00000013037
rosa_roxburghii Rroxscaffold_7G00187770
rosa_rugosa Rorug06G0133800 Rorug06G0133800 Rorug06G0133800
rosa_samantha Rh6AG246300 Rh6BG248500 Rh6CG249800 Rh6DG241200
rosa_wichuraiana Rw6G021310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1017
Acc16I TGCGCA 1 cut(s) 144
AccB1I GGYRCC 2 cut(s) 910, 965
AccBSI CCGCTC 1 cut(s) 1064
AciI CCGC 7 cut(s) 29, 294, 332, 662, 1064, 1125, 1440
AclI AACGTT 1 cut(s) 1572
AclWI GGATC 3 cut(s) 445, 1346, 1359
AcoI YGGCCR 3 cut(s) 976, 1345, 1609
AcsI RAATTY 2 cut(s) 86, 548
AcuI CTGAAG 2 cut(s) 60, 1497
AfaI GTAC 3 cut(s) 931, 1152, 1169
AfiI CCNNNNNNNGG 4 cut(s) 389, 407, 614, 996
AgsI TTSAA 2 cut(s) 130, 342
AjnI CCWGG 5 cut(s) 382, 777, 864, 991, 1347
AjuI GAANNNNNNNTTGG 2 cut(s) 1452, 1484
Alw21I GWGCWC 2 cut(s) 627, 836
Alw26I GTCTC 1 cut(s) 1308
AlwI GGATC 3 cut(s) 445, 1346, 1359
AlwNI CAGNNNCTG 1 cut(s) 31
Ama87I CYCGRG 1 cut(s) 1280
AoxI GGCC 6 cut(s) 385, 976, 1036, 1345, 1441, 1609
ApeKI GCWGC 8 cut(s) 25, 172, 296, 848, 1291, 1370, 1425, 1580
ApoI RAATTY 2 cut(s) 86, 548
AspLEI GCGC 1 cut(s) 145
AsuHPI GGTGA 3 cut(s) 20, 380, 1062
AvaI CYCGRG 1 cut(s) 1280
AxyI CCTNAGG 1 cut(s) 738
BalI TGGCCA 3 cut(s) 978, 1347, 1611
BamHI GGATCC 1 cut(s) 1351
BanI GGYRCC 2 cut(s) 910, 965
BanII GRGCYC 1 cut(s) 836
BbsI GAAGAC 1 cut(s) 437
Bbv12I GWGCWC 2 cut(s) 627, 836
BbvCI CCTCAGC 1 cut(s) 221
BbvI GCAGC 8 cut(s) 37, 184, 283, 835, 1303, 1357, 1437, 1567
BccI CCATC 1 cut(s) 530
BceAI ACGGC 3 cut(s) 41, 987, 1356
BcgI CGANNNNNNTGC 2 cut(s) 1480, 1514
BciT130I CCWGG 5 cut(s) 384, 779, 866, 993, 1349
BciVI GTATCC 1 cut(s) 206
BclI TGATCA 1 cut(s) 241
BcoDI GTCTC 1 cut(s) 1308
BfaI CTAG 4 cut(s) 476, 656, 1214, 1400
BfmI CTRYAG 1 cut(s) 1584
BfuI GTATCC 1 cut(s) 206
BglI GCCNNNNNGGC 1 cut(s) 1449
Bme1390I CCNGG 5 cut(s) 384, 779, 866, 993, 1349
BmeT110I CYCGRG 1 cut(s) 1280
BmiI GGNNCC 4 cut(s) 783, 912, 967, 1353
BmrFI CCNGG 5 cut(s) 384, 779, 866, 993, 1349
BmsI GCATC 6 cut(s) 59, 648, 1081, 1131, 1233, 1278
BpiI GAAGAC 1 cut(s) 437
BpmI CTGGAG 2 cut(s) 501, 1071
Bpu10I CCTNAGC 3 cut(s) 221, 609, 755
BpuEI CTTGAG 2 cut(s) 312, 476
BsaBI GATNNNNATC 2 cut(s) 603, 1221
BsaXI ACNNNNNCTCC 2 cut(s) 307, 337
Bsc4I CCNNNNNNNGG 4 cut(s) 389, 407, 614, 996
Bse118I RCCGGY 1 cut(s) 160
Bse1I ACTGG 3 cut(s) 1267, 1369, 1612
Bse21I CCTNAGG 1 cut(s) 738
Bse8I GATNNNNATC 2 cut(s) 603, 1221
BseBI CCWGG 5 cut(s) 384, 779, 866, 993, 1349
BseGI GGATG 2 cut(s) 522, 639
BseJI GATNNNNATC 2 cut(s) 603, 1221
BseLI CCNNNNNNNGG 4 cut(s) 389, 407, 614, 996
BseMII CTCAG 7 cut(s) 235, 494, 600, 729, 1241, 1340, 1508
BseNI ACTGG 3 cut(s) 1267, 1369, 1612
BseRI GAGGAG 4 cut(s) 209, 315, 378, 571
BseXI GCAGC 8 cut(s) 37, 184, 283, 835, 1303, 1357, 1437, 1567
BseYI CCCAGC 1 cut(s) 1057
BshFI GGCC 6 cut(s) 387, 978, 1038, 1347, 1443, 1611
BshNI GGYRCC 2 cut(s) 910, 965
BsiHKAI GWGCWC 2 cut(s) 627, 836
BsiHKCI CYCGRG 1 cut(s) 1280
BsiSI CCGG 1 cut(s) 161
BslFI GGGAC 2 cut(s) 204, 1393
BslI CCNNNNNNNGG 4 cut(s) 389, 407, 614, 996
BsmAI GTCTC 1 cut(s) 1308
BsmFI GGGAC 2 cut(s) 204, 1393
BsmI GAATGC 3 cut(s) 799, 820, 922
BsnI GGCC 6 cut(s) 387, 978, 1038, 1347, 1443, 1611
BsoBI CYCGRG 1 cut(s) 1280
Bsp1286I GDGCHC 2 cut(s) 627, 836
Bsp143I GATC 6 cut(s) 208, 241, 437, 451, 598, 1351
BspACI CCGC 7 cut(s) 29, 294, 332, 662, 1064, 1125, 1440
BspANI GGCC 6 cut(s) 387, 978, 1038, 1347, 1443, 1611
BspCNI CTCAG 7 cut(s) 234, 493, 601, 730, 1240, 1339, 1507
BspLI GGNNCC 4 cut(s) 783, 912, 967, 1353
BspPI GGATC 3 cut(s) 445, 1346, 1359
BspQI GCTCTTC 2 cut(s) 858, 1473
BspT107I GGYRCC 2 cut(s) 910, 965
BsrBI CCGCTC 1 cut(s) 1064
BsrFI RCCGGY 1 cut(s) 160
BsrI ACTGG 3 cut(s) 1267, 1369, 1612
BssAI RCCGGY 1 cut(s) 160
BssMI GATC 6 cut(s) 208, 241, 437, 451, 598, 1351
BssT1I CCWWGG 4 cut(s) 388, 959, 1039, 1429
Bst2UI CCWGG 5 cut(s) 384, 779, 866, 993, 1349
Bst4CI ACNGT 5 cut(s) 118, 250, 786, 1167, 1506
Bst6I CTCTTC 2 cut(s) 858, 1473
BstAPI GCANNNNNTGC 3 cut(s) 917, 1141, 1507
BstC8I GCNNGC 8 cut(s) 162, 237, 462, 976, 1211, 1345, 1438, 1557
BstDEI CTNAG 9 cut(s) 221, 480, 609, 738, 755, 1227, 1326, 1445, 1494
BstDSI CCRYGG 2 cut(s) 114, 969
BstF5I GGATG 2 cut(s) 522, 639
BstHHI GCGC 1 cut(s) 145
BstKTI GATC 6 cut(s) 211, 244, 440, 454, 601, 1354
BstMAI GTCTC 1 cut(s) 1308
BstMBI GATC 6 cut(s) 208, 241, 437, 451, 598, 1351
BstNI CCWGG 5 cut(s) 384, 779, 866, 993, 1349
BstNSI RCATGY 2 cut(s) 754, 1213
BstSCI CCNGG 5 cut(s) 382, 777, 864, 991, 1347
BstSFI CTRYAG 1 cut(s) 1584
BstV1I GCAGC 8 cut(s) 37, 184, 283, 835, 1303, 1357, 1437, 1567
BstV2I GAAGAC 1 cut(s) 437
BstX2I RGATCY 2 cut(s) 437, 1351
BstYI RGATCY 2 cut(s) 437, 1351
Bsu36I CCTNAGG 1 cut(s) 738
BsuI GTATCC 1 cut(s) 206
BsuRI GGCC 6 cut(s) 387, 978, 1038, 1347, 1443, 1611
BtgI CCRYGG 2 cut(s) 114, 969
BtgZI GCGATG 1 cut(s) 168
BtsCI GGATG 2 cut(s) 522, 639
BtsI GCAGTG 1 cut(s) 318
BtsIMutI CAGTG 1 cut(s) 318
Cac8I GCNNGC 8 cut(s) 162, 237, 462, 976, 1211, 1345, 1438, 1557
CaiI CAGNNNCTG 1 cut(s) 31
CfoI GCGC 1 cut(s) 145
Cfr10I RCCGGY 1 cut(s) 160
Csp6I GTAC 3 cut(s) 930, 1151, 1168
CviAII CATG 5 cut(s) 493, 620, 751, 1171, 1210
CviQI GTAC 3 cut(s) 930, 1151, 1168
DdeI CTNAG 9 cut(s) 221, 480, 609, 738, 755, 1227, 1326, 1445, 1494
DpnI GATC 6 cut(s) 210, 243, 439, 453, 600, 1353
DpnII GATC 6 cut(s) 208, 241, 437, 451, 598, 1351
DrdI GACNNNNNNGTC 1 cut(s) 1017
DseDI GACNNNNNNGTC 1 cut(s) 1017
EaeI YGGCCR 3 cut(s) 976, 1345, 1609
Eam1104I CTCTTC 2 cut(s) 858, 1473
EarI CTCTTC 2 cut(s) 858, 1473
Ecl136II GAGCTC 1 cut(s) 834
Eco130I CCWWGG 4 cut(s) 388, 959, 1039, 1429
Eco147I AGGCCT 1 cut(s) 1038
Eco24I GRGCYC 1 cut(s) 836
Eco53kI GAGCTC 1 cut(s) 834
Eco57I CTGAAG 2 cut(s) 60, 1497
Eco81I CCTNAGG 1 cut(s) 738
Eco88I CYCGRG 1 cut(s) 1280
EcoICRI GAGCTC 1 cut(s) 834
EcoRII CCWGG 5 cut(s) 382, 777, 864, 991, 1347
EcoT14I CCWWGG 4 cut(s) 388, 959, 1039, 1429
EcoT38I GRGCYC 1 cut(s) 836
ErhI CCWWGG 4 cut(s) 388, 959, 1039, 1429
FaeI CATG 5 cut(s) 496, 623, 754, 1174, 1213
FalI AAGNNNNNCTT 2 cut(s) 877, 909
FaqI GGGAC 2 cut(s) 204, 1393
FatI CATG 5 cut(s) 492, 619, 750, 1170, 1209
FauI CCCGC 2 cut(s) 301, 1132
FauNDI CATATG 1 cut(s) 255
FbaI TGATCA 1 cut(s) 241
FokI GGATG 2 cut(s) 509, 626
FriOI GRGCYC 1 cut(s) 836
FspBI CTAG 4 cut(s) 476, 656, 1214, 1400
FspI TGCGCA 1 cut(s) 144
GlaI GCGC 1 cut(s) 144
GsaI CCCAGC 1 cut(s) 1061
GsuI CTGGAG 2 cut(s) 501, 1071
HaeIII GGCC 6 cut(s) 387, 978, 1038, 1347, 1443, 1611
HapII CCGG 1 cut(s) 161
HhaI GCGC 1 cut(s) 145
Hin1II CATG 5 cut(s) 496, 623, 754, 1174, 1213
Hin6I GCGC 1 cut(s) 143
HinP1I GCGC 1 cut(s) 143
HincII GTYRAC 1 cut(s) 1576
HindII GTYRAC 1 cut(s) 1576
HpaI GTTAAC 1 cut(s) 1576
HpaII CCGG 1 cut(s) 161
HphI GGTGA 3 cut(s) 20, 380, 1062
Hpy166II GTNNAC 4 cut(s) 61, 932, 1046, 1576
Hpy188I TCNGA 7 cut(s) 68, 213, 362, 483, 811, 1205, 1329
Hpy188III TCNNGA 8 cut(s) 449, 455, 526, 608, 656, 1088, 1280, 1475
Hpy8I GTNNAC 4 cut(s) 61, 932, 1046, 1576
Hpy99I CGWCG 1 cut(s) 103
HpyAV CCTTC 6 cut(s) 35, 285, 294, 653, 990, 1271
HpyCH4III ACNGT 5 cut(s) 118, 250, 786, 1167, 1506
HpyCH4IV ACGT 3 cut(s) 63, 193, 1572
HpyF3I CTNAG 9 cut(s) 221, 480, 609, 738, 755, 1227, 1326, 1445, 1494
HpySE526I ACGT 3 cut(s) 63, 193, 1572
Hsp92II CATG 5 cut(s) 496, 623, 754, 1174, 1213
HspAI GCGC 1 cut(s) 143
KroI GCCGGC 1 cut(s) 160
KroNI GCCGGC 1 cut(s) 162
Ksp22I TGATCA 1 cut(s) 241
KspAI GTTAAC 1 cut(s) 1576
Kzo9I GATC 6 cut(s) 208, 241, 437, 451, 598, 1351
LguI GCTCTTC 2 cut(s) 858, 1473
LmnI GCTCC 4 cut(s) 77, 295, 328, 1061
Lsp1109I GCAGC 8 cut(s) 37, 184, 283, 835, 1303, 1357, 1437, 1567
LweI GCATC 6 cut(s) 59, 648, 1081, 1131, 1233, 1278
MaeI CTAG 4 cut(s) 476, 656, 1214, 1400
MaeII ACGT 3 cut(s) 63, 193, 1572
MaeIII GTNAC 3 cut(s) 94, 871, 1568
MalI GATC 6 cut(s) 210, 243, 439, 453, 600, 1353
MbiI CCGCTC 1 cut(s) 1064
MboI GATC 6 cut(s) 208, 241, 437, 451, 598, 1351
MboII GAAGA 4 cut(s) 270, 437, 845, 1490
MfeI CAATTG 1 cut(s) 1100
MflI RGATCY 2 cut(s) 437, 1351
MhlI GDGCHC 2 cut(s) 627, 836
MlsI TGGCCA 3 cut(s) 978, 1347, 1611
MluCI AATT 4 cut(s) 86, 138, 548, 1100
MluNI TGGCCA 3 cut(s) 978, 1347, 1611
MlyI GAGTC 9 cut(s) 131, 208, 737, 1041, 1061, 1078, 1195, 1486, 1587
Mox20I TGGCCA 3 cut(s) 978, 1347, 1611
MroNI GCCGGC 1 cut(s) 160
MscI TGGCCA 3 cut(s) 978, 1347, 1611
MseI TTAA 6 cut(s) 137, 396, 747, 788, 1191, 1575
Msp20I TGGCCA 3 cut(s) 978, 1347, 1611
MspA1I CMGCKG 2 cut(s) 31, 296
MspI CCGG 1 cut(s) 161
MspR9I CCNGG 5 cut(s) 384, 779, 866, 993, 1349
MunI CAATTG 1 cut(s) 1100
Mva1269I GAATGC 3 cut(s) 799, 820, 922
MvaI CCWGG 5 cut(s) 384, 779, 866, 993, 1349
NaeI GCCGGC 1 cut(s) 162
NdeI CATATG 1 cut(s) 255
NdeII GATC 6 cut(s) 208, 241, 437, 451, 598, 1351
NgoMIV GCCGGC 1 cut(s) 160
NlaIII CATG 5 cut(s) 496, 623, 754, 1174, 1213
NlaIV GGNNCC 4 cut(s) 783, 912, 967, 1353
NmuCI GTSAC 1 cut(s) 94
NsbI TGCGCA 1 cut(s) 144
NspI RCATGY 2 cut(s) 754, 1213
PaeI GCATGC 1 cut(s) 1213
PceI AGGCCT 1 cut(s) 1038
PciSI GCTCTTC 2 cut(s) 858, 1473
PctI GAATGC 3 cut(s) 799, 820, 922
PdiI GCCGGC 1 cut(s) 162
PfeI GAWTC 7 cut(s) 17, 110, 371, 529, 1174, 1222, 1521
PfoI TCCNGGA 1 cut(s) 777
PleI GAGTC 9 cut(s) 130, 208, 736, 1041, 1061, 1078, 1194, 1486, 1587
PpsI GAGTC 9 cut(s) 130, 208, 736, 1041, 1061, 1078, 1194, 1486, 1587
Psp124BI GAGCTC 1 cut(s) 836
Psp1406I AACGTT 1 cut(s) 1572
Psp6I CCWGG 5 cut(s) 382, 777, 864, 991, 1347
PspFI CCCAGC 1 cut(s) 1057
PspGI CCWGG 5 cut(s) 382, 777, 864, 991, 1347
PspN4I GGNNCC 4 cut(s) 783, 912, 967, 1353
PstNI CAGNNNCTG 1 cut(s) 31
PsuI RGATCY 2 cut(s) 437, 1351
RsaI GTAC 3 cut(s) 931, 1152, 1169
RsaNI GTAC 3 cut(s) 930, 1151, 1168
SacI GAGCTC 1 cut(s) 836
SapI GCTCTTC 2 cut(s) 858, 1473
SaqAI TTAA 6 cut(s) 137, 396, 747, 788, 1191, 1575
Sau3AI GATC 6 cut(s) 208, 241, 437, 451, 598, 1351
SchI GAGTC 9 cut(s) 131, 208, 737, 1041, 1061, 1078, 1195, 1486, 1587
ScrFI CCNGG 5 cut(s) 384, 779, 866, 993, 1349
SduI GDGCHC 2 cut(s) 627, 836
SfaNI GCATC 6 cut(s) 59, 648, 1081, 1131, 1233, 1278
SfcI CTRYAG 1 cut(s) 1584
SmlI CTYRAG 2 cut(s) 327, 455
SmoI CTYRAG 2 cut(s) 327, 455
SphI GCATGC 1 cut(s) 1213
Sse9I AATT 4 cut(s) 86, 138, 548, 1100
SseBI AGGCCT 1 cut(s) 1038
SsiI CCGC 7 cut(s) 29, 294, 332, 662, 1064, 1125, 1440
SspI AATATT 2 cut(s) 724, 904
SspMI CTAG 4 cut(s) 476, 656, 1214, 1400
SstI GAGCTC 1 cut(s) 836
StuI AGGCCT 1 cut(s) 1038
StyD4I CCNGG 5 cut(s) 382, 777, 864, 991, 1347
StyI CCWWGG 4 cut(s) 388, 959, 1039, 1429
TaaI ACNGT 5 cut(s) 118, 250, 786, 1167, 1506
TaiI ACGT 3 cut(s) 66, 196, 1575
TaqI TCGA 3 cut(s) 20, 108, 262
TasI AATT 4 cut(s) 86, 138, 548, 1100
TatI WGTACW 1 cut(s) 1167
TauI GCSGC 3 cut(s) 31, 665, 1443
TfiI GAWTC 7 cut(s) 17, 110, 371, 529, 1174, 1222, 1521
Tru1I TTAA 6 cut(s) 137, 396, 747, 788, 1191, 1575
Tru9I TTAA 6 cut(s) 137, 396, 747, 788, 1191, 1575
TscAI CASTG 1 cut(s) 325
TseFI GTSAC 1 cut(s) 94
TseI GCWGC 8 cut(s) 25, 172, 296, 848, 1291, 1370, 1425, 1580
Tsp45I GTSAC 1 cut(s) 94
TspDTI ATGAA 9 cut(s) 242, 524, 551, 584, 783, 806, 1187, 1235, 1427
TspGWI ACGGA 1 cut(s) 1407
TspRI CASTG 1 cut(s) 325
XapI RAATTY 2 cut(s) 86, 548
XbaI TCTAGA 1 cut(s) 655
XceI RCATGY 2 cut(s) 754, 1213
XspI CTAG 4 cut(s) 476, 656, 1214, 1400
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.