AT2G17200

Ubiquitin domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0010891
Physical Location & Seq
Reverse (-)
7481881 .. 7485240
3360 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G17200.1

Sequence Viewer

Length: 1656 bp
ATGGGTGGAGAGGGAGATTCAAGTCAGCCGCAGAGTGGTGAAGGAGAAGCTGTGGCTGTGAACATCAGGTGCTCTAATGGCACGAAATTTAGTGTGAAGACGAGTCTCGATTCAACGGTGGAGTCTTTCAAAGAGTTGGTGGCTCAGAGCAGCGATGTTCCAGCTAATCAGCAGCGCTTGATTTACAAGGGTCGTATCCTCAAGGACGATCAAACTCTCCTCAGCTATGGTTTGCAGGCTGATCACACCATTCATATGGTTAGAGGCTCTGCACCTTCTTCAGCACCACCTCCTGCTCCGGCCGCAAGCCAAACCACTGCACCTAGTGTTACTCGAGGGGTTGGTTCAGATAATAGCTCGAATCTAGGAGGAGCGAGTCCTGGGGAATCTTTGTTCCCTGGGCTTGGATTTAATCCTCTGGGTGGTGGAAATGCTATGTCTGGGTTATTTGGAGCTGGTCTTCCGGATCTTGTGCAGACACAGCAACAACTAGCTCAAAACCCTAACATGATTAGAGATATGATGAATACTCCAGCCATCCAGAACCTTATGAACAACCCAGAGTTTATGAGGAGTATGATTATGAATAACCCTCAAATGCGTGAGCTTGTAGATCGCAATCCTGAGCTTGGTCATGTGCTCAATGACCCAAGCATCCTTCGTCAAACTCTAGAAGCGGCAAGAAACCCAGAGCTTATGCGTGAAATGATGCGGAATACTGATAGGGCTATGAGTAATATTGAGTCTATGCCTGAGGGATTTAACATGCTTAGGCGTATGTATGAAAATGTCCAGGAACCGTTAATGAATGCTACCACTATGTCCGGGAATGCTGGAAACAATACAGGCTCCAATCCATTTGCTGCTCTGTTGGGAAACCAGGGGGTCACTACGCAAGGAAGTGATGCTTCTAATAATTCTTCGACACCAAATGCTGGAACGGGGACTATTCCGAATGCAAATCCACTTCCTAATCCTTGGGGTGCTACAGGTGGTCAGACAACTGCCCCTGGAAGGACAAATGTTGGTGGGGATGCGAGGAGCCCTGGACTTGGTGGCCTTGGTGGTCTTGGAAGCCTTGGAGGCCTTGGTGGACTCGGTATGCTTGGAGCGGATTCACCTCTTGGTGCGACTCCAGATGCTTCTCAATTGAGCCAGTTATTGCAAAACCCAGCCATATCGCAGATGATGCAAAGCGTATTTTCCAATCCACAATACATGAATCAGCTTATGAGTCTTAACCCACAACTCCGAAGCATGCTAGATTCGAATCCTCAGTTGAGGGAAATGATGCAGAACCCAGATTTCCTTCGTCAGTTTAGTTCTCCGGAGATGATGCAGCAAATGATGACTCTACAGCAATCACTATCTCAGAATAGAAATACAGCCAGCCAGGATGCGGGGCAAACTGGTGCTGCCACAGGAAATAACGGGGGGCTGGATTTATTGATGAATATGTTTGGCAGTCTTGGTGCTGGCGGCCTGAGTGGCACGAACCAATCCAATGTTCCTCCTGAAGAGCGGTACGCTACTCAATTGCAACAGTTGCAGGAAATGGGATTCTATGACAGAGCAGAGAACATTAGGGCGTTGCTTGCAACCAATGGTAACGTTAACGCTGCTGTAGAACGACTCTTGGGGAGTATCGGACAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000045 GO:0001666 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005773 GO:0005776 GO:0005783 GO:0005829 GO:0005886 GO:0006508 GO:0006511 GO:0006807 GO:0006914 GO:0006950 GO:0006996 GO:0007033 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009628 GO:0009893 GO:0009894 GO:0009896 GO:0009966 GO:0009987 GO:0010033 GO:0010243 GO:0010498 GO:0010604 GO:0010646 GO:0010941 GO:0010959 GO:0012505 GO:0016020 GO:0016043 GO:0016234 GO:0016235 GO:0016236 GO:0019222 GO:0019538 GO:0019899 GO:0019900 GO:0019941 GO:0022411 GO:0022607 GO:0022898 GO:0023051 GO:0030162 GO:0030163 GO:0030433 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031396 GO:0031398 GO:0031399 GO:0031401 GO:0031593 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032409 GO:0032410 GO:0032412 GO:0032413 GO:0032434 GO:0032436 GO:0032879 GO:0032984 GO:0032991 GO:0033554 GO:0034762 GO:0034763 GO:0034765 GO:0034766 GO:0034976 GO:0035973 GO:0036293 GO:0036294 GO:0036503 GO:0042176 GO:0042221 GO:0042802 GO:0042981 GO:0043067 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043269 GO:0043271 GO:0043632 GO:0043933 GO:0044085 GO:0044092 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045732 GO:0045862 GO:0048471 GO:0048518 GO:0048519 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051051 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051603 GO:0051716 GO:0051924 GO:0051926 GO:0060255 GO:0061136 GO:0061912 GO:0061919 GO:0065007 GO:0065009 GO:0070013 GO:0070482 GO:0070887 GO:0070925 GO:0071453 GO:0071456 GO:0071704 GO:0071840 GO:0071944 GO:0080090 GO:0080134 GO:0080135 GO:0097352 GO:0140030 GO:1900407 GO:1901019 GO:1901020 GO:1901339 GO:1901340 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1901800 GO:1902175 GO:1902531 GO:1902882 GO:1903050 GO:1903052 GO:1903069 GO:1903071 GO:1903169 GO:1903170 GO:1903201 GO:1903320 GO:1903322 GO:1903362 GO:1903364 GO:1904062 GO:1904063 GO:1904292 GO:1904294 GO:1905037 GO:1905897 GO:1905898 GO:2000058 GO:2000060 GO:2001233 GO:2001242 GO:2001257 GO:2001258
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
UBA ubiquitin

Protein Analysis

551

Amino Acids

58.05

Weight (kDa)

4.81

Isoelectric Point (pI)

49.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ubiquitin PF00240 20 - 88 2.5e-22 Ubiquitin family
Rad60-SLD PF11976 20 - 87 1.8e-08 Ubiquitin-2 like Rad60 SUMO-like
UBQLN1 PF23195 163 - 288 2.6e-51 Ubiquilin-1-like domain
UBQLN1 PF23195 383 - 458 5.2e-12 Ubiquilin-1-like domain
UBA PF00627 509 - 545 2e-10 UBA/TS-N domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0010891)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G17190 AT2G17200
fragaria_vesca FvH4_2g16610 FvH4_2g16610
malus_domestica MD05G1134300.v1.1 MD10G1139400.v1.1
prunus_persica Prupe.8G178100_v2.0.a1
pyrus_communis pycom05g13090 pycom10g11840
rosa_chinensis RchiOBHm_Chr6g0280671
rosa_laevigata RLG00000013037
rosa_roxburghii Rroxscaffold_7G00187770
rosa_rugosa Rorug06G0133800 Rorug06G0133800 Rorug06G0133800
rosa_samantha Rh6AG246300 Rh6BG248500 Rh6CG249800 Rh6DG241200
rosa_wichuraiana Rw6G021310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 935
AccBSI CCGCTC 2 cut(s) 1112, 1522
AccIII TCCGGA 2 cut(s) 463, 1327
AciI CCGC 8 cut(s) 29, 303, 677, 712, 1112, 1400, 1479, 1522
AclI AACGTT 1 cut(s) 1611
AclWI GGATC 1 cut(s) 474
AcoI YGGCCR 1 cut(s) 300
AcsI RAATTY 1 cut(s) 86
AcuI CTGAAG 2 cut(s) 264, 1536
AdeI CACNNNGTG 1 cut(s) 326
AfaI GTAC 1 cut(s) 1526
AfeI AGCGCT 1 cut(s) 176
AfiI CCNNNNNNNGG 8 cut(s) 35, 404, 422, 629, 935, 1014, 1052, 1399
AgsI TTSAA 3 cut(s) 21, 114, 130
AjnI CCWGG 7 cut(s) 379, 397, 792, 879, 1009, 1045, 1392
AjuI GAANNNNNNNTTGG 2 cut(s) 1491, 1523
AloI GAACNNNNNNTCC 2 cut(s) 377, 409
Alw21I GWGCWC 2 cut(s) 74, 642
Alw26I GTCTC 1 cut(s) 110
AlwI GGATC 1 cut(s) 474
Ama87I CYCGRG 1 cut(s) 333
Aor13HI TCCGGA 2 cut(s) 463, 1327
Aor51HI AGCGCT 1 cut(s) 176
AoxI GGCC 4 cut(s) 300, 1057, 1084, 1480
ApeKI GCWGC 6 cut(s) 150, 172, 863, 1339, 1415, 1619
ApoI RAATTY 1 cut(s) 86
AspLEI GCGC 1 cut(s) 177
AsuC2I CCSGG 1 cut(s) 826
AsuHPI GGTGA 2 cut(s) 50, 1110
AsuII TTCGAA 1 cut(s) 1268
AvaI CYCGRG 1 cut(s) 333
AxyI CCTNAGG 1 cut(s) 753
BanII GRGCYC 1 cut(s) 1046
BbsI GAAGAC 2 cut(s) 104, 452
Bbv12I GWGCWC 2 cut(s) 74, 642
BbvCI CCTCAGC 1 cut(s) 221
BbvI GCAGC 6 cut(s) 162, 184, 850, 1351, 1402, 1606
BccI CCATC 1 cut(s) 545
BciT130I CCWGG 7 cut(s) 381, 399, 794, 881, 1011, 1047, 1394
BciVI GTATCC 1 cut(s) 206
BclI TGATCA 1 cut(s) 241
BcnI CCSGG 1 cut(s) 826
BcoDI GTCTC 1 cut(s) 110
BfaI CTAG 5 cut(s) 324, 365, 491, 671, 1262
BfmI CTRYAG 3 cut(s) 987, 1355, 1623
BfoI RGCGCY 1 cut(s) 178
BfuI GTATCC 1 cut(s) 206
BglI GCCNNNNNGGC 2 cut(s) 1083, 1488
Bme1390I CCNGG 8 cut(s) 381, 399, 794, 826, 881, 1011, 1047, 1394
BmeT110I CYCGRG 1 cut(s) 333
BmiI GGNNCC 3 cut(s) 798, 850, 1043
BmrFI CCNGG 8 cut(s) 381, 399, 794, 826, 881, 1011, 1047, 1394
BmsI GCATC 9 cut(s) 663, 699, 895, 1024, 1129, 1179, 1281, 1326, 1387
BpiI GAAGAC 2 cut(s) 104, 452
BpmI CTGGAG 2 cut(s) 516, 1119
Bpu10I CCTNAGC 3 cut(s) 221, 624, 770
Bpu14I TTCGAA 1 cut(s) 1268
BpuEI CTTGAG 1 cut(s) 185
BpuMI CCSGG 1 cut(s) 826
BsaBI GATNNNNATC 2 cut(s) 618, 1269
BsaWI WCCGGW 2 cut(s) 463, 1327
BsaXI ACNNNNNCTCC 2 cut(s) 36, 66
Bsc4I CCNNNNNNNGG 8 cut(s) 35, 404, 422, 629, 935, 1014, 1052, 1399
Bse1I ACTGG 2 cut(s) 1156, 1414
Bse21I CCTNAGG 1 cut(s) 753
Bse8I GATNNNNATC 2 cut(s) 618, 1269
BseAI TCCGGA 2 cut(s) 463, 1327
BseBI CCWGG 7 cut(s) 381, 399, 794, 881, 1011, 1047, 1394
BseGI GGATG 4 cut(s) 537, 654, 1039, 1402
BseJI GATNNNNATC 2 cut(s) 618, 1269
BseLI CCNNNNNNNGG 8 cut(s) 35, 404, 422, 629, 935, 1014, 1052, 1399
BseMII CTCAG 7 cut(s) 158, 235, 615, 744, 1289, 1385, 1475
BseNI ACTGG 2 cut(s) 1156, 1414
BseRI GAGGAG 4 cut(s) 209, 384, 586, 1054
BseX3I CGGCCG 1 cut(s) 300
BseXI GCAGC 6 cut(s) 162, 184, 850, 1351, 1402, 1606
BseYI CCCAGC 1 cut(s) 1171
BsgI GTGCAG 3 cut(s) 255, 303, 494
Bsh1285I CGRYCG 1 cut(s) 303
BshFI GGCC 4 cut(s) 302, 1059, 1086, 1482
BsiEI CGRYCG 1 cut(s) 303
BsiHKAI GWGCWC 2 cut(s) 74, 642
BsiHKCI CYCGRG 1 cut(s) 333
BsiSI CCGG 4 cut(s) 299, 464, 825, 1328
BslFI GGGAC 1 cut(s) 958
BslI CCNNNNNNNGG 8 cut(s) 35, 404, 422, 629, 935, 1014, 1052, 1399
BsmAI GTCTC 1 cut(s) 110
BsmFI GGGAC 1 cut(s) 958
BsmI GAATGC 3 cut(s) 814, 835, 961
BsnI GGCC 4 cut(s) 302, 1059, 1086, 1482
BsoBI CYCGRG 1 cut(s) 333
Bsp119I TTCGAA 1 cut(s) 1268
Bsp1286I GDGCHC 3 cut(s) 74, 642, 1046
Bsp13I TCCGGA 2 cut(s) 463, 1327
Bsp143I GATC 4 cut(s) 208, 241, 466, 613
BspACI CCGC 8 cut(s) 29, 303, 677, 712, 1112, 1400, 1479, 1522
BspANI GGCC 4 cut(s) 302, 1059, 1086, 1482
BspCNI CTCAG 7 cut(s) 157, 234, 616, 745, 1288, 1384, 1476
BspEI TCCGGA 2 cut(s) 463, 1327
BspLI GGNNCC 3 cut(s) 798, 850, 1043
BspPI GGATC 1 cut(s) 474
BspQI GCTCTTC 1 cut(s) 1512
BspT104I TTCGAA 1 cut(s) 1268
BsrBI CCGCTC 2 cut(s) 1112, 1522
BsrI ACTGG 2 cut(s) 1156, 1414
BssMI GATC 4 cut(s) 208, 241, 466, 613
BssT1I CCWWGG 4 cut(s) 977, 1060, 1078, 1087
Bst2UI CCWGG 7 cut(s) 381, 399, 794, 881, 1011, 1047, 1394
Bst4CI ACNGT 4 cut(s) 118, 801, 1545, 1653
Bst6I CTCTTC 1 cut(s) 1512
BstAPI GCANNNNNTGC 2 cut(s) 1189, 1546
BstBI TTCGAA 1 cut(s) 1268
BstC8I GCNNGC 6 cut(s) 237, 307, 1259, 1390, 1477, 1596
BstDEI CTNAG 8 cut(s) 144, 221, 624, 753, 770, 1275, 1371, 1484
BstF5I GGATG 4 cut(s) 537, 654, 1039, 1402
BstH2I RGCGCY 1 cut(s) 178
BstHHI GCGC 1 cut(s) 177
BstKTI GATC 4 cut(s) 211, 244, 469, 616
BstMAI GTCTC 1 cut(s) 110
BstMBI GATC 4 cut(s) 208, 241, 466, 613
BstMCI CGRYCG 1 cut(s) 303
BstMWI GCNNNNNNNGC 8 cut(s) 78, 302, 481, 1083, 1189, 1488, 1546, 1595
BstNI CCWGG 7 cut(s) 381, 399, 794, 881, 1011, 1047, 1394
BstNSI RCATGY 2 cut(s) 769, 1261
BstSCI CCNGG 8 cut(s) 379, 397, 792, 824, 879, 1009, 1045, 1392
BstSFI CTRYAG 3 cut(s) 987, 1355, 1623
BstV1I GCAGC 6 cut(s) 162, 184, 850, 1351, 1402, 1606
BstV2I GAAGAC 2 cut(s) 104, 452
BstX2I RGATCY 1 cut(s) 466
BstXI CCANNNNNNTGG 1 cut(s) 256
BstYI RGATCY 1 cut(s) 466
BstZI CGGCCG 1 cut(s) 300
Bsu36I CCTNAGG 1 cut(s) 753
BsuI GTATCC 1 cut(s) 206
BsuRI GGCC 4 cut(s) 302, 1059, 1086, 1482
BtgZI GCGATG 1 cut(s) 168
BtsCI GGATG 4 cut(s) 537, 654, 1039, 1402
BtsI GCAGTG 1 cut(s) 315
BtsIMutI CAGTG 1 cut(s) 315
Cac8I GCNNGC 6 cut(s) 237, 307, 1259, 1390, 1477, 1596
CfoI GCGC 1 cut(s) 177
Csp6I GTAC 1 cut(s) 1525
CviAII CATG 5 cut(s) 508, 635, 766, 1219, 1258
CviQI GTAC 1 cut(s) 1525
DdeI CTNAG 8 cut(s) 144, 221, 624, 753, 770, 1275, 1371, 1484
DpnI GATC 4 cut(s) 210, 243, 468, 615
DpnII GATC 4 cut(s) 208, 241, 466, 613
DraIII CACNNNGTG 1 cut(s) 326
EaeI YGGCCR 1 cut(s) 300
EagI CGGCCG 1 cut(s) 300
Eam1104I CTCTTC 1 cut(s) 1512
EarI CTCTTC 1 cut(s) 1512
EclXI CGGCCG 1 cut(s) 300
Eco130I CCWWGG 4 cut(s) 977, 1060, 1078, 1087
Eco147I AGGCCT 1 cut(s) 1086
Eco24I GRGCYC 1 cut(s) 1046
Eco47III AGCGCT 1 cut(s) 176
Eco52I CGGCCG 1 cut(s) 300
Eco57I CTGAAG 2 cut(s) 264, 1536
Eco81I CCTNAGG 1 cut(s) 753
Eco88I CYCGRG 1 cut(s) 333
EcoRII CCWGG 7 cut(s) 379, 397, 792, 879, 1009, 1045, 1392
EcoT14I CCWWGG 4 cut(s) 977, 1060, 1078, 1087
EcoT38I GRGCYC 1 cut(s) 1046
ErhI CCWWGG 4 cut(s) 977, 1060, 1078, 1087
FaeI CATG 5 cut(s) 511, 638, 769, 1222, 1261
FalI AAGNNNNNCTT 2 cut(s) 892, 924
FaqI GGGAC 1 cut(s) 958
FatI CATG 5 cut(s) 507, 634, 765, 1218, 1257
FauI CCCGC 1 cut(s) 1393
FauNDI CATATG 1 cut(s) 255
FbaI TGATCA 1 cut(s) 241
FokI GGATG 4 cut(s) 524, 641, 1046, 1409
FriOI GRGCYC 1 cut(s) 1046
FspBI CTAG 5 cut(s) 324, 365, 491, 671, 1262
GlaI GCGC 1 cut(s) 176
GsaI CCCAGC 1 cut(s) 1175
GsuI CTGGAG 2 cut(s) 516, 1119
HaeII RGCGCY 1 cut(s) 178
HaeIII GGCC 4 cut(s) 302, 1059, 1086, 1482
HapII CCGG 4 cut(s) 299, 464, 825, 1328
HhaI GCGC 1 cut(s) 177
Hin1II CATG 5 cut(s) 511, 638, 769, 1222, 1261
Hin6I GCGC 1 cut(s) 175
HinP1I GCGC 1 cut(s) 175
HincII GTYRAC 1 cut(s) 1615
HindII GTYRAC 1 cut(s) 1615
HpaI GTTAAC 1 cut(s) 1615
HpaII CCGG 4 cut(s) 299, 464, 825, 1328
HphI GGTGA 2 cut(s) 50, 1110
Hpy166II GTNNAC 3 cut(s) 61, 1094, 1615
Hpy188I TCNGA 7 cut(s) 147, 349, 954, 999, 1253, 1374, 1649
Hpy188III TCNNGA 8 cut(s) 107, 464, 541, 623, 671, 1136, 1328, 1514
Hpy8I GTNNAC 3 cut(s) 61, 1094, 1615
HpyAV CCTTC 5 cut(s) 35, 285, 668, 1008, 1319
HpyCH4III ACNGT 4 cut(s) 118, 801, 1545, 1653
HpyCH4IV ACGT 1 cut(s) 1611
HpyF10VI GCNNNNNNNGC 8 cut(s) 78, 302, 481, 1083, 1189, 1488, 1546, 1595
HpyF3I CTNAG 8 cut(s) 144, 221, 624, 753, 770, 1275, 1371, 1484
HpySE526I ACGT 1 cut(s) 1611
Hsp92II CATG 5 cut(s) 511, 638, 769, 1222, 1261
HspAI GCGC 1 cut(s) 175
Kpn2I TCCGGA 2 cut(s) 463, 1327
Ksp22I TGATCA 1 cut(s) 241
KspAI GTTAAC 1 cut(s) 1615
Kzo9I GATC 4 cut(s) 208, 241, 466, 613
LguI GCTCTTC 1 cut(s) 1512
LmnI GCTCC 6 cut(s) 301, 371, 452, 854, 1041, 1109
Lsp1109I GCAGC 6 cut(s) 162, 184, 850, 1351, 1402, 1606
LweI GCATC 9 cut(s) 663, 699, 895, 1024, 1129, 1179, 1281, 1326, 1387
MaeI CTAG 5 cut(s) 324, 365, 491, 671, 1262
MaeII ACGT 1 cut(s) 1611
MaeIII GTNAC 3 cut(s) 328, 886, 1607
MalI GATC 4 cut(s) 210, 243, 468, 615
MbiI CCGCTC 2 cut(s) 1112, 1522
MboI GATC 4 cut(s) 208, 241, 466, 613
MboII GAAGA 5 cut(s) 109, 270, 452, 912, 1529
MfeI CAATTG 2 cut(s) 1148, 1535
MflI RGATCY 1 cut(s) 466
MhlI GDGCHC 3 cut(s) 74, 642, 1046
MluCI AATT 4 cut(s) 86, 916, 1148, 1535
MlyI GAGTC 9 cut(s) 112, 131, 385, 752, 1089, 1126, 1243, 1345, 1626
MroI TCCGGA 2 cut(s) 463, 1327
MseI TTAA 5 cut(s) 411, 762, 803, 1239, 1614
MslI CAYNNNNRTG 1 cut(s) 254
MspI CCGG 4 cut(s) 299, 464, 825, 1328
MspR9I CCNGG 8 cut(s) 381, 399, 794, 826, 881, 1011, 1047, 1394
MunI CAATTG 2 cut(s) 1148, 1535
Mva1269I GAATGC 3 cut(s) 814, 835, 961
MvaI CCWGG 7 cut(s) 381, 399, 794, 881, 1011, 1047, 1394
MwoI GCNNNNNNNGC 8 cut(s) 78, 302, 481, 1083, 1189, 1488, 1546, 1595
NciI CCSGG 1 cut(s) 826
NdeI CATATG 1 cut(s) 255
NdeII GATC 4 cut(s) 208, 241, 466, 613
NlaIII CATG 5 cut(s) 511, 638, 769, 1222, 1261
NlaIV GGNNCC 3 cut(s) 798, 850, 1043
NmuCI GTSAC 1 cut(s) 886
NspI RCATGY 2 cut(s) 769, 1261
NspV TTCGAA 1 cut(s) 1268
PaeI GCATGC 1 cut(s) 1261
PaeR7I CTCGAG 1 cut(s) 333
PasI CCCWGGG 1 cut(s) 398
PceI AGGCCT 1 cut(s) 1086
PciSI GCTCTTC 1 cut(s) 1512
PctI GAATGC 3 cut(s) 814, 835, 961
PfeI GAWTC 9 cut(s) 17, 110, 361, 386, 1115, 1222, 1265, 1270, 1560
PflMI CCANNNNNTGG 1 cut(s) 935
PfoI TCCNGGA 2 cut(s) 792, 824
PleI GAGTC 9 cut(s) 111, 130, 384, 751, 1089, 1126, 1242, 1345, 1626
PpsI GAGTC 9 cut(s) 111, 130, 384, 751, 1089, 1126, 1242, 1345, 1626
Psp1406I AACGTT 1 cut(s) 1611
Psp6I CCWGG 7 cut(s) 379, 397, 792, 879, 1009, 1045, 1392
PspFI CCCAGC 1 cut(s) 1171
PspGI CCWGG 7 cut(s) 379, 397, 792, 879, 1009, 1045, 1392
PspN4I GGNNCC 3 cut(s) 798, 850, 1043
PspXI VCTCGAGB 1 cut(s) 333
PsuI RGATCY 1 cut(s) 466
RsaI GTAC 1 cut(s) 1526
RsaNI GTAC 1 cut(s) 1525
RseI CAYNNNNRTG 1 cut(s) 254
SapI GCTCTTC 1 cut(s) 1512
SaqAI TTAA 5 cut(s) 411, 762, 803, 1239, 1614
Sau3AI GATC 4 cut(s) 208, 241, 466, 613
SchI GAGTC 9 cut(s) 112, 131, 385, 752, 1089, 1126, 1243, 1345, 1626
ScrFI CCNGG 8 cut(s) 381, 399, 794, 826, 881, 1011, 1047, 1394
SduI GDGCHC 3 cut(s) 74, 642, 1046
SfaNI GCATC 9 cut(s) 663, 699, 895, 1024, 1129, 1179, 1281, 1326, 1387
SfcI CTRYAG 3 cut(s) 987, 1355, 1623
Sfr274I CTCGAG 1 cut(s) 333
SfuI TTCGAA 1 cut(s) 1268
SlaI CTCGAG 1 cut(s) 333
SmiMI CAYNNNNRTG 1 cut(s) 254
SmlI CTYRAG 2 cut(s) 200, 333
SmoI CTYRAG 2 cut(s) 200, 333
SphI GCATGC 1 cut(s) 1261
Sse9I AATT 4 cut(s) 86, 916, 1148, 1535
SseBI AGGCCT 1 cut(s) 1086
SsiI CCGC 8 cut(s) 29, 303, 677, 712, 1112, 1400, 1479, 1522
SspI AATATT 1 cut(s) 739
SspMI CTAG 5 cut(s) 324, 365, 491, 671, 1262
StuI AGGCCT 1 cut(s) 1086
StyD4I CCNGG 8 cut(s) 379, 397, 792, 824, 879, 1009, 1045, 1392
StyI CCWWGG 4 cut(s) 977, 1060, 1078, 1087
TaaI ACNGT 4 cut(s) 118, 801, 1545, 1653
TaiI ACGT 1 cut(s) 1614
TaqI TCGA 5 cut(s) 108, 334, 359, 923, 1268
TasI AATT 4 cut(s) 86, 916, 1148, 1535
TauI GCSGC 4 cut(s) 31, 305, 680, 1482
TfiI GAWTC 9 cut(s) 17, 110, 361, 386, 1115, 1222, 1265, 1270, 1560
Tru1I TTAA 5 cut(s) 411, 762, 803, 1239, 1614
Tru9I TTAA 5 cut(s) 411, 762, 803, 1239, 1614
TscAI CASTG 1 cut(s) 322
TseFI GTSAC 1 cut(s) 886
TseI GCWGC 6 cut(s) 150, 172, 863, 1339, 1415, 1619
Tsp45I GTSAC 1 cut(s) 886
TspDTI ATGAA 8 cut(s) 242, 539, 566, 599, 798, 821, 1235, 1466
TspRI CASTG 1 cut(s) 322
Van91I CCANNNNNTGG 1 cut(s) 935
XapI RAATTY 1 cut(s) 86
XbaI TCTAGA 1 cut(s) 670
XceI RCATGY 2 cut(s) 769, 1261
XhoI CTCGAG 1 cut(s) 333
XspI CTAG 5 cut(s) 324, 365, 491, 671, 1262
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.