AT2G17430

May be involved in modulation of pathogen defense and leaf cell death

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Forward (+)
7568018 .. 7570912
2895 bp
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UTR
Exon/CDS
Intron
AT2G17430.1

Sequence Viewer

Length: 1629 bp
ATGATCACAAGAAGCAGGTGTCGAAGATCTTTGTTATGGTTTCTAGTGTTCCATGGCGGAGCTACAGCCACCGGAGCTCCCTCTGGTGGGAAAGAGCTTTCTCAGACGCCTACTTGGGCAGTCGCCGTCGTCTGCACCTTTCTCATCCTCATTTCCCATCTCCTTGAAAAGGGTCTTCAAAGACTCGCCAACTGGCTATGGAAGAAGCATAAAAACTCTCTCCTTGAAGCCTTAGAGAAAATCAAAGCTGAGCTGATGATCCTTGGATTCATTTCTTTATTACTCACTTTTGGAGAACCATATATTCTCAAGATCTGTGTTCCTCGAAAAGCTGCTCTCTCTATGTTACCTTGTTTATCTGAAGACACAGTGCTTTTCCAGAAACTTGCTCCATCATCTCTTAGCAGGCATCTTTTGGCTGCTGGTGATACATCTATTAATTGCAAACAAGGATCTGAGCCACTCATAACATTGAAAGGCTTGCACCAACTTCACATCTTGTTGTTCTTCTTGGCCATCTTTCATATCGTATATAGTTTAATCACCATGATGCTTAGCAGGCTCAAGATTCGTGGATGGAAAAAGTGGGAGCAAGAGACATTATCTAATGACTATGAGTTTTCTATTGATCATTCAAGACTTAGGCTCACTCATGAGACTTCTTTTGTGAGAGAACATACAAGTTTCTGGACAACAACTCCTTTCTTCTTTTACGTCGGATGCTTCTTTAGGCAGTTCTTTGTATCTGTTGAAAGAACCGACTACTTGACTCTGCGCCATGGATTCATCTCTGCCCATTTAGCTCCAGGAAGAAAGTTCAACTTCCAGAGATATATCAAAAGATCTCTCGAGGATGATTTCAAGTTGGTAGTTGGAATAAGTCCAGTTCTTTGGGCATCATTTGTAATCTTCTTGCTGTTCAATGTTAATGGCTGGAGAACATTGTTTTGGGCATCGATACCTCCTCTACTCATAATCCTAGCTGTTGGAACAAAGCTTCAAGCAATTATGGCAACAATGGCGCTAGAAATCGTAGAGACACATGCAGTAGTTCAGGGGATGCCTTTAGTGCAAGGTTCAGATCGATACTTTTGGTTCGACTGTCCTCAACTACTTCTTCATCTTATCCACTTTGCCTTGTTTCAGAATGCTTTCCAGATAACACACTTCTTCTGGATATGGTATTCTTTTGGATTAAAATCATGCTTCCATAAAGATTTCAATCTTGTAGTCAGCAAACTCTTTCTATGCCTAGGAGCTTTGATCTTATGCAGCTACATCACTCTCCCATTGTACGCCCTCGTTACTCAGATGGGTTCACACATGAAGAAAGCAGTGTTTGATGAGCAAATGGCAAAGGCATTGAAGAAGTGGCACAAAGACATCAAATTGAAGAAAGGTAAAGCGAGGAAGCTCCCGAGCAAGACACTTGGTGTTTCAGAGAGTTTCAGCCTCTCTTCCTCTTCCTCTGCAACCACTCTTCACCGTTCCAAGACCACTGGTCACTCTTCTAACATCATATACTACAAACAAGAAGATGAAGAAGACGAAATGTCTGATCTTGAAGCTGGAGCAGAGGATGCTATTGACAGGATTCAACAACAGGAGATGCAATTCCACAACTCTTAG

Protein Analysis

542

Amino Acids

62.11

Weight (kDa)

9.32

Isoelectric Point (pI)

39.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mlo PF03094 31 - 495 2.3e-204 Mlo family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 6
Acc36I ACCTGC 1 cut(s) 6
AciI CCGC 1 cut(s) 57
AclWI GGATC 2 cut(s) 253, 460
AcoI YGGCCR 1 cut(s) 513
AcuI CTGAAG 1 cut(s) 381
AcyI GRCGYC 1 cut(s) 107
AdeI CACNNNGTG 1 cut(s) 1433
AfaI GTAC 1 cut(s) 1295
AfiI CCNNNNNNNGG 3 cut(s) 86, 87, 169
AhdI GACNNNNNGTC 2 cut(s) 1500, 1552
AjnI CCWGG 1 cut(s) 805
AjuI GAANNNNNNNTTGG 2 cut(s) 931, 963
Alw21I GWGCWC 1 cut(s) 79
Alw26I GTCTC 3 cut(s) 590, 650, 1031
AlwI GGATC 2 cut(s) 253, 460
Ama87I CYCGRG 2 cut(s) 848, 1417
AoxI GGCC 1 cut(s) 513
ApeKI GCWGC 3 cut(s) 332, 419, 1272
AseI ATTAAT 1 cut(s) 438
Asp700I GAANNNNTTC 1 cut(s) 1151
AspA2I CCTAGG 1 cut(s) 1252
AspLEI GCGC 2 cut(s) 777, 1024
AsuHPI GGTGA 3 cut(s) 437, 535, 1475
AvaI CYCGRG 2 cut(s) 848, 1417
AvrII CCTAGG 1 cut(s) 1252
BalI TGGCCA 1 cut(s) 515
BanII GRGCYC 1 cut(s) 79
BbsI GAAGAC 3 cut(s) 167, 369, 1551
Bbv12I GWGCWC 1 cut(s) 79
BbvI GCAGC 3 cut(s) 319, 406, 1284
BccI CCATC 5 cut(s) 165, 400, 524, 570, 1306
BceAI ACGGC 1 cut(s) 110
BciT130I CCWGG 1 cut(s) 807
BclI TGATCA 2 cut(s) 3, 628
BcoDI GTCTC 3 cut(s) 590, 650, 1031
BfaI CTAG 4 cut(s) 44, 980, 1025, 1253
BfmI CTRYAG 1 cut(s) 63
BfoI RGCGCY 1 cut(s) 1025
BfuAI ACCTGC 1 cut(s) 6
BglII AGATCT 3 cut(s) 26, 312, 842
BisI GCNGC 3 cut(s) 333, 420, 1273
BlnI CCTAGG 1 cut(s) 1252
BlpI GCTNAGC 2 cut(s) 249, 554
BlsI GCNGC 3 cut(s) 334, 421, 1274
Bme1390I CCNGG 1 cut(s) 807
BmeRI GACNNNNNGTC 2 cut(s) 1500, 1552
BmeT110I CYCGRG 2 cut(s) 848, 1417
BmrFI CCNGG 1 cut(s) 807
BmsI GCATC 8 cut(s) 418, 540, 710, 905, 962, 1050, 1570, 1599
BpiI GAAGAC 3 cut(s) 167, 369, 1551
BpmI CTGGAG 3 cut(s) 789, 955, 1590
Bpu1102I GCTNAGC 2 cut(s) 249, 554
BpuEI CTTGAG 2 cut(s) 293, 548
Bsa29I ATCGAT 2 cut(s) 956, 1084
BsaBI GATNNNNATC 2 cut(s) 1198, 1221
BsaHI GRCGYC 1 cut(s) 107
BsaJI CCNNGG 4 cut(s) 52, 262, 778, 1252
BsaWI WCCGGW 1 cut(s) 71
BsaXI ACNNNNNCTCC 4 cut(s) 61, 91, 682, 712
Bsc4I CCNNNNNNNGG 3 cut(s) 86, 87, 169
Bse1I ACTGG 3 cut(s) 197, 884, 1504
Bse8I GATNNNNATC 2 cut(s) 1198, 1221
BseBI CCWGG 1 cut(s) 807
BseCI ATCGAT 2 cut(s) 956, 1084
BseDI CCNNGG 4 cut(s) 52, 262, 778, 1252
BseGI GGATG 6 cut(s) 144, 581, 725, 859, 1065, 1585
BseJI GATNNNNATC 2 cut(s) 1198, 1221
BseLI CCNNNNNNNGG 3 cut(s) 86, 87, 169
BseMII CTCAG 4 cut(s) 116, 240, 447, 1322
BseNI ACTGG 3 cut(s) 197, 884, 1504
BseRI GAGGAG 1 cut(s) 954
BseXI GCAGC 3 cut(s) 319, 406, 1284
BsgI GTGCAG 1 cut(s) 118
BshFI GGCC 1 cut(s) 515
BshVI ATCGAT 2 cut(s) 956, 1084
BsiHKAI GWGCWC 1 cut(s) 79
BsiHKCI CYCGRG 2 cut(s) 848, 1417
BsiSI CCGG 1 cut(s) 72
BslI CCNNNNNNNGG 3 cut(s) 86, 87, 169
BsmAI GTCTC 3 cut(s) 590, 650, 1031
BsmI GAATGC 1 cut(s) 1153
BsnI GGCC 1 cut(s) 515
BsoBI CYCGRG 2 cut(s) 848, 1417
Bsp1286I GDGCHC 1 cut(s) 79
Bsp1720I GCTNAGC 2 cut(s) 249, 554
Bsp19I CCATGG 2 cut(s) 52, 778
BspACI CCGC 1 cut(s) 57
BspANI GGCC 1 cut(s) 515
BspCNI CTCAG 4 cut(s) 115, 241, 448, 1321
BspDI ATCGAT 2 cut(s) 956, 1084
BspHI TCATGA 1 cut(s) 652
BspMI ACCTGC 1 cut(s) 6
BspPI GGATC 2 cut(s) 253, 460
BsrI ACTGG 3 cut(s) 197, 884, 1504
BssECI CCNNGG 4 cut(s) 52, 262, 778, 1252
BssNI GRCGYC 1 cut(s) 107
BssT1I CCWWGG 4 cut(s) 52, 262, 778, 1252
Bst2UI CCWGG 1 cut(s) 807
Bst4CI ACNGT 3 cut(s) 370, 1103, 1487
Bst6I CTCTTC 4 cut(s) 1462, 1468, 1485, 1513
BstACI GRCGYC 1 cut(s) 107
BstAPI GCANNNNNTGC 1 cut(s) 1580
BstC8I GCNNGC 3 cut(s) 407, 482, 560
BstDEI CTNAG 9 cut(s) 102, 232, 249, 401, 456, 554, 641, 1308, 1626
BstDSI CCRYGG 2 cut(s) 52, 778
BstENI CCTNNNNNAGG 1 cut(s) 167
BstF5I GGATG 6 cut(s) 144, 581, 725, 859, 1065, 1585
BstH2I RGCGCY 1 cut(s) 1025
BstHHI GCGC 2 cut(s) 777, 1024
BstMAI GTCTC 3 cut(s) 590, 650, 1031
BstMWI GCNNNNNNNGC 7 cut(s) 74, 559, 800, 1010, 1019, 1069, 1580
BstNI CCWGG 1 cut(s) 807
BstNSI RCATGY 1 cut(s) 1046
BstSCI CCNGG 1 cut(s) 805
BstSFI CTRYAG 1 cut(s) 63
BstV1I GCAGC 3 cut(s) 319, 406, 1284
BstV2I GAAGAC 3 cut(s) 167, 369, 1551
BstX2I RGATCY 4 cut(s) 26, 312, 452, 842
BstXI CCANNNNNNTGG 1 cut(s) 891
BstYI RGATCY 4 cut(s) 26, 312, 452, 842
Bsu15I ATCGAT 2 cut(s) 956, 1084
BsuRI GGCC 1 cut(s) 515
BsuTUI ATCGAT 2 cut(s) 956, 1084
BtgI CCRYGG 2 cut(s) 52, 778
BtsCI GGATG 6 cut(s) 144, 581, 725, 859, 1065, 1585
BtsI GCAGTG 1 cut(s) 1341
BtsIMutI CAGTG 3 cut(s) 375, 1341, 1497
BveI ACCTGC 1 cut(s) 6
Cac8I GCNNGC 3 cut(s) 407, 482, 560
CciI TCATGA 1 cut(s) 652
CfoI GCGC 2 cut(s) 777, 1024
ClaI ATCGAT 2 cut(s) 956, 1084
CseI GACGC 1 cut(s) 115
Csp6I GTAC 1 cut(s) 1294
CspCI CAANNNNNGTGG 2 cut(s) 553, 588
CviAII CATG 7 cut(s) 53, 547, 653, 779, 1043, 1203, 1324
CviQI GTAC 1 cut(s) 1294
DdeI CTNAG 9 cut(s) 102, 232, 249, 401, 456, 554, 641, 1308, 1626
DraIII CACNNNGTG 1 cut(s) 1433
DriI GACNNNNNGTC 2 cut(s) 1500, 1552
EaeI YGGCCR 1 cut(s) 513
Eam1104I CTCTTC 4 cut(s) 1462, 1468, 1485, 1513
Eam1105I GACNNNNNGTC 2 cut(s) 1500, 1552
EarI CTCTTC 4 cut(s) 1462, 1468, 1485, 1513
EciI GGCGGA 1 cut(s) 72
Ecl136II GAGCTC 1 cut(s) 77
Eco130I CCWWGG 4 cut(s) 52, 262, 778, 1252
Eco24I GRGCYC 1 cut(s) 79
Eco53kI GAGCTC 1 cut(s) 77
Eco57I CTGAAG 1 cut(s) 381
Eco88I CYCGRG 2 cut(s) 848, 1417
EcoICRI GAGCTC 1 cut(s) 77
EcoNI CCTNNNNNAGG 1 cut(s) 167
EcoRII CCWGG 1 cut(s) 805
EcoT14I CCWWGG 4 cut(s) 52, 262, 778, 1252
EcoT38I GRGCYC 1 cut(s) 79
ErhI CCWWGG 4 cut(s) 52, 262, 778, 1252
FaeI CATG 7 cut(s) 56, 550, 656, 782, 1046, 1206, 1327
FalI AAGNNNNNCTT 2 cut(s) 806, 838
FatI CATG 7 cut(s) 52, 546, 652, 778, 1042, 1202, 1323
FbaI TGATCA 2 cut(s) 3, 628
Fnu4HI GCNGC 3 cut(s) 333, 420, 1273
FokI GGATG 6 cut(s) 131, 588, 732, 866, 1072, 1592
FriOI GRGCYC 1 cut(s) 79
Fsp4HI GCNGC 3 cut(s) 333, 420, 1273
FspBI CTAG 4 cut(s) 44, 980, 1025, 1253
GlaI GCGC 2 cut(s) 776, 1023
GluI GCNGC 3 cut(s) 333, 420, 1273
GsuI CTGGAG 3 cut(s) 789, 955, 1590
HaeII RGCGCY 1 cut(s) 1025
HaeIII GGCC 1 cut(s) 515
HapII CCGG 1 cut(s) 72
HgaI GACGC 1 cut(s) 115
HhaI GCGC 2 cut(s) 777, 1024
Hin1I GRCGYC 1 cut(s) 107
Hin1II CATG 7 cut(s) 56, 550, 656, 782, 1046, 1206, 1327
Hin6I GCGC 2 cut(s) 775, 1022
HinP1I GCGC 2 cut(s) 775, 1022
HindIII AAGCTT 1 cut(s) 995
HinfI GANTC 6 cut(s) 183, 267, 568, 769, 783, 1594
HpaII CCGG 1 cut(s) 72
HphI GGTGA 3 cut(s) 437, 535, 1475
Hpy166II GTNNAC 1 cut(s) 1319
Hpy188I TCNGA 9 cut(s) 105, 361, 457, 719, 1081, 1146, 1311, 1441, 1558
Hpy8I GTNNAC 1 cut(s) 1319
Hpy99I CGWCG 2 cut(s) 131, 719
HpyCH4III ACNGT 3 cut(s) 370, 1103, 1487
HpyCH4IV ACGT 1 cut(s) 714
HpyCH4V TGCA 8 cut(s) 135, 444, 484, 1046, 1072, 1272, 1472, 1612
HpyF10VI GCNNNNNNNGC 7 cut(s) 74, 559, 800, 1010, 1019, 1069, 1580
HpyF3I CTNAG 9 cut(s) 102, 232, 249, 401, 456, 554, 641, 1308, 1626
HpySE526I ACGT 1 cut(s) 714
Hsp92I GRCGYC 1 cut(s) 107
Hsp92II CATG 7 cut(s) 56, 550, 656, 782, 1046, 1206, 1327
HspAI GCGC 2 cut(s) 775, 1022
Ksp22I TGATCA 2 cut(s) 3, 628
LmnI GCTCC 9 cut(s) 59, 74, 82, 394, 589, 808, 1256, 1419, 1571
Lsp1109I GCAGC 3 cut(s) 319, 406, 1284
LweI GCATC 8 cut(s) 418, 540, 710, 905, 962, 1050, 1570, 1599
MaeI CTAG 4 cut(s) 44, 980, 1025, 1253
MaeII ACGT 1 cut(s) 714
MaeIII GTNAC 3 cut(s) 345, 1303, 1502
MflI RGATCY 4 cut(s) 26, 312, 452, 842
MhlI GDGCHC 1 cut(s) 79
MlsI TGGCCA 1 cut(s) 515
MluCI AATT 4 cut(s) 439, 1005, 1388, 1613
MluNI TGGCCA 1 cut(s) 515
MlyI GAGTC 2 cut(s) 177, 763
MmeI TCCRAC 3 cut(s) 697, 853, 967
Mox20I TGGCCA 1 cut(s) 515
MroXI GAANNNNTTC 1 cut(s) 1151
MscI TGGCCA 1 cut(s) 515
MseI TTAA 4 cut(s) 438, 539, 927, 1196
MslI CAYNNNNRTG 1 cut(s) 548
Msp20I TGGCCA 1 cut(s) 515
MspI CCGG 1 cut(s) 72
MspR9I CCNGG 1 cut(s) 807
Mva1269I GAATGC 1 cut(s) 1153
MvaI CCWGG 1 cut(s) 807
MwoI GCNNNNNNNGC 7 cut(s) 74, 559, 800, 1010, 1019, 1069, 1580
NcoI CCATGG 2 cut(s) 52, 778
NlaIII CATG 7 cut(s) 56, 550, 656, 782, 1046, 1206, 1327
NmuCI GTSAC 1 cut(s) 1502
NspI RCATGY 1 cut(s) 1046
PaeR7I CTCGAG 1 cut(s) 848
PagI TCATGA 1 cut(s) 652
PaqCI CACCTGC 1 cut(s) 6
PctI GAATGC 1 cut(s) 1153
PdmI GAANNNNTTC 1 cut(s) 1151
PfeI GAWTC 4 cut(s) 267, 568, 783, 1594
PfoI TCCNGGA 1 cut(s) 805
PkrI GCNGC 3 cut(s) 334, 421, 1274
PleI GAGTC 2 cut(s) 177, 763
PpsI GAGTC 2 cut(s) 177, 763
PshBI ATTAAT 1 cut(s) 438
Psp124BI GAGCTC 1 cut(s) 79
Psp6I CCWGG 1 cut(s) 805
PspGI CCWGG 1 cut(s) 805
PsuI RGATCY 4 cut(s) 26, 312, 452, 842
RsaI GTAC 1 cut(s) 1295
RsaNI GTAC 1 cut(s) 1294
RseI CAYNNNNRTG 1 cut(s) 548
SacI GAGCTC 1 cut(s) 79
SaqAI TTAA 4 cut(s) 438, 539, 927, 1196
SatI GCNGC 3 cut(s) 333, 420, 1273
SchI GAGTC 2 cut(s) 177, 763
ScrFI CCNGG 1 cut(s) 807
SduI GDGCHC 1 cut(s) 79
SfaNI GCATC 8 cut(s) 418, 540, 710, 905, 962, 1050, 1570, 1599
SfcI CTRYAG 1 cut(s) 63
Sfr274I CTCGAG 1 cut(s) 848
SlaI CTCGAG 1 cut(s) 848
SmiMI CAYNNNNRTG 1 cut(s) 548
SmlI CTYRAG 3 cut(s) 308, 563, 848
SmoI CTYRAG 3 cut(s) 308, 563, 848
Sse9I AATT 4 cut(s) 439, 1005, 1388, 1613
SsiI CCGC 1 cut(s) 57
SspMI CTAG 4 cut(s) 44, 980, 1025, 1253
SstI GAGCTC 1 cut(s) 79
StyD4I CCNGG 1 cut(s) 805
StyI CCWWGG 4 cut(s) 52, 262, 778, 1252
TaaI ACNGT 3 cut(s) 370, 1103, 1487
TaiI ACGT 1 cut(s) 717
TaqI TCGA 6 cut(s) 22, 325, 849, 956, 1084, 1098
TasI AATT 4 cut(s) 439, 1005, 1388, 1613
TfiI GAWTC 4 cut(s) 267, 568, 783, 1594
Tru1I TTAA 4 cut(s) 438, 539, 927, 1196
Tru9I TTAA 4 cut(s) 438, 539, 927, 1196
TscAI CASTG 3 cut(s) 375, 1341, 1504
TseFI GTSAC 1 cut(s) 1502
TseI GCWGC 3 cut(s) 332, 419, 1272
Tsp45I GTSAC 1 cut(s) 1502
TspDTI ATGAA 6 cut(s) 259, 512, 775, 1109, 1340, 1554
TspRI CASTG 3 cut(s) 375, 1341, 1504
VspI ATTAAT 1 cut(s) 438
XagI CCTNNNNNAGG 1 cut(s) 167
XceI RCATGY 1 cut(s) 1046
XhoI CTCGAG 1 cut(s) 848
XmaJI CCTAGG 1 cut(s) 1252
XmnI GAANNNNTTC 1 cut(s) 1151
XspI CTAG 4 cut(s) 44, 980, 1025, 1253
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.