Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009122

Physical Location & Seq

Genomic Coordinates Reverse (-)

7887584 .. 7888878

Gene Structure 1295 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G18140.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1014 bp

ATGGCAAGAATCGGGAGCTTTCTCATTCTTCTGTCTCTCACTTACGCTCTTACTCTCTGCATCTGTGACAACGCGAGTAACTTTGGCGGCAACAAAAGGAACCTCTTCCCAGATTTCTACAGGAGCTCGTGCCCTAGAGCGGAGGAGATCGTGAGGTCCGTTGTAGCCAAGGCATTTGAAAGGGAGACTCGTATGGCTGCTTCTCTCATGAGGCTCCATTTCCACGATTGTTTCGTTCAGGGTTGTGATGGATCGTTGCTTCTAGACACCAGTGGGAGTATAGTTACTGAGAAGAACTCTAACCCTAACAGCAGATCGGCTCGCGGGTTTGAAGTTGTTGACGAGATCAAGGCAGCATTAGAGAATGAATGCCCTAACACTGTCTCTTGTGCTGACGCCTTAACTCTAGCTGCTAGAGACTCCTCTGTTCTTACAGGTGGGCCAAGCTGGACGGTTCCTTTGGGAAGAAGAGATTCGGCAACTGCAAGCCGGGCTAAACCAAACAAAGACCTTCCTGAACCCGACAACTTGTTCGACACAATTTTCTTGAGATTTAGCAATGAAGGTCTCAATCTGACTGACCTCGTTGCTCTATCCGGGAGCCACACCATTGGATTCTCAAGATGCACTAGTTTCAGACAGAGACTTTACAATCAATCCGGAAGCGGAAGTCCCGACACAACCTTAGAGAAATCCTACGCTGCTATCTTGCGCCAAAGGTGCCCTAGATCGGGTGGGGACCAGAACCTTTCCGAGCTTGACATCAACAGTGCTGGAAGATTTGATAACAGCTACTTTAAGAACTTGATTGAGAACATGGGACTGTTGAATTCCGACCAAGTCTTGTTCTCTAGCAACGAACAATCGAGAGAGCTCGTGAAGAAGTATGCAGAGGATCAAGAAGAGTTCTTCGAGCAATTCGCGGAATCGATGATCAAGATGGGGAAGATCTCTCCCTTGACAGGTTCGAGTGGTGAGATCAGAAAGAAATGCAGGAAAATTAATAACTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004601 GO:0005575 GO:0005618 GO:0005623 GO:0005975 GO:0005976 GO:0006725 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009505 GO:0009636 GO:0009698 GO:0009699 GO:0009791 GO:0009808 GO:0009809 GO:0009845 GO:0009987 GO:0010154 GO:0010383 GO:0016209 GO:0016491 GO:0016684 GO:0016998 GO:0019438 GO:0019748 GO:0022414 GO:0030312 GO:0032501 GO:0032502 GO:0032504 GO:0042221 GO:0043170 GO:0044036 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044347 GO:0044464 GO:0044550 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051716 GO:0055114 GO:0061458 GO:0070887 GO:0071554 GO:0071704 GO:0071944 GO:0080001 GO:0090351 GO:0097237 GO:0098754 GO:0098869 GO:1901360 GO:1901362 GO:1901576 GO:1990748

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

peroxidase

Protein Analysis

337

Amino Acids

37.2

Weight (kDa)

6.37

Isoelectric Point (pI)

49.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
peroxidase	PF00141	51 - 299	7.6e-84	Peroxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009122)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18140 AT2G18150 AT4G36430 AT5G66390
fragaria_vesca	FvH4_1g12490
malus_domestica	MD02G1138900.v1.1 MD02G1139300.v1.1 MD15G1252300.v1.1
prunus_persica	Prupe.7G161900_v2.0.a1
pyrus_communis	pycom02g11000 pycom15g22220
rosa_chinensis	RchiOBHm_Chr2g0100381
rosa_laevigata	RLG00000016969
rosa_multiflora	Rmu_sc0001095.1_g000016 Rmu_sc0004164.1_g000002 Rmu_sc0027393.1_g000001
rosa_roxburghii	Rroxscaffold_2G00142290
rosa_rugosa	Rorug02G0087800
rosa_samantha	Rh2AG137000 Rh2CG142400 Rh2DG142400
rosa_wichuraiana	Rw2G010730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	720
AccBSI	CCGCTC	1 cut(s)	140
AccII	CGCG	3 cut(s)	74, 324, 923
AccIII	TCCGGA	1 cut(s)	659
AciI	CCGC	5 cut(s)	87, 140, 324, 666, 923
AclWI	GGATC	2 cut(s)	259, 903
AcsI	RAATTY	1 cut(s)	829
AcyI	GRCGYC	1 cut(s)	396
AfiI	CCNNNNNNNGG	4 cut(s)	139, 730, 731, 962
AgsI	TTSAA	3 cut(s)	179, 332, 829
AhlI	ACTAGT	1 cut(s)	629
AluBI	AGCT	7 cut(s)	18, 126, 410, 447, 757, 792, 874
AluI	AGCT	7 cut(s)	18, 126, 410, 447, 757, 792, 874
Alw21I	GWGCWC	2 cut(s)	128, 876
Alw26I	GTCTC	6 cut(s)	39, 179, 388, 411, 572, 637
AlwI	GGATC	2 cut(s)	259, 903
Aor13HI	TCCGGA	1 cut(s)	659
AoxI	GGCC	1 cut(s)	440
ApeKI	GCWGC	4 cut(s)	197, 353, 410, 701
ApoI	RAATTY	1 cut(s)	829
ArsI	GACNNNNNNTTYG	4 cut(s)	442, 474, 515, 547
AseI	ATTAAT	1 cut(s)	1002
Asp700I	GAANNNNTTC	2 cut(s)	104, 472
AspLEI	GCGC	1 cut(s)	714
AspS9I	GGNCC	3 cut(s)	156, 440, 739
AsuC2I	CCSGG	2 cut(s)	491, 598
AsuHPI	GGTGA	1 cut(s)	986
AvaII	GGWCC	2 cut(s)	156, 739
BaeGI	GKGCMC	2 cut(s)	134, 725
BanI	GGYRCC	1 cut(s)	720
BanII	GRGCYC	2 cut(s)	128, 876
BarI	GAAGNNNNNNTAC	2 cut(s)	184, 216
BauI	CACGAG	2 cut(s)	127, 875
Bbv12I	GWGCWC	2 cut(s)	128, 876
BbvI	GCAGC	4 cut(s)	184, 365, 397, 688
BccI	CCATC	2 cut(s)	242, 934
BclI	TGATCA	1 cut(s)	933
BcnI	CCSGG	2 cut(s)	491, 598
BcoDI	GTCTC	6 cut(s)	39, 179, 388, 411, 572, 637
BcuI	ACTAGT	1 cut(s)	629
BfaI	CTAG	7 cut(s)	135, 263, 407, 414, 630, 726, 852
BfmI	CTRYAG	1 cut(s)	118
BglII	AGATCT	1 cut(s)	948
BisI	GCNGC	5 cut(s)	88, 198, 354, 411, 702
BlsI	GCNGC	5 cut(s)	89, 199, 355, 412, 703
Bme1390I	CCNGG	2 cut(s)	491, 598
Bme18I	GGWCC	2 cut(s)	156, 739
BmgT120I	GGNCC	3 cut(s)	156, 440, 739
BmiI	GGNNCC	6 cut(s)	101, 215, 456, 602, 722, 740
BmrFI	CCNGG	2 cut(s)	491, 598
BmsI	GCATC	2 cut(s)	69, 614
BplI	GAGNNNNNCTC	2 cut(s)	281, 313
BpuEI	CTTGAG	2 cut(s)	568, 604
BpuMI	CCSGG	2 cut(s)	491, 598
Bsa29I	ATCGAT	1 cut(s)	929
BsaHI	GRCGYC	1 cut(s)	396
BsaI	GGTCTC	1 cut(s)	572
BsaJI	CCNNGG	1 cut(s)	168
BsaWI	WCCGGW	1 cut(s)	659
Bsc4I	CCNNNNNNNGG	4 cut(s)	139, 730, 731, 962
Bse1I	ACTGG	1 cut(s)	270
Bse3DI	GCAATG	1 cut(s)	565
BseAI	TCCGGA	1 cut(s)	659
BseCI	ATCGAT	1 cut(s)	929
BseDI	CCNNGG	1 cut(s)	168
BseLI	CCNNNNNNNGG	4 cut(s)	139, 730, 731, 962
BseMI	GCAATG	1 cut(s)	565
BseMII	CTCAG	1 cut(s)	279
BseNI	ACTGG	1 cut(s)	270
BseRI	GAGGAG	2 cut(s)	158, 412
BseSI	GKGCMC	2 cut(s)	134, 725
BseXI	GCAGC	4 cut(s)	184, 365, 397, 688
Bsh1236I	CGCG	3 cut(s)	74, 324, 923
BshFI	GGCC	1 cut(s)	442
BshNI	GGYRCC	1 cut(s)	720
BshVI	ATCGAT	1 cut(s)	929
BsiHKAI	GWGCWC	2 cut(s)	128, 876
BsiSI	CCGG	3 cut(s)	490, 597, 660
BslFI	GGGAC	3 cut(s)	657, 752, 834
BslI	CCNNNNNNNGG	4 cut(s)	139, 730, 731, 962
BsmAI	GTCTC	6 cut(s)	39, 179, 388, 411, 572, 637
BsmFI	GGGAC	3 cut(s)	657, 752, 834
BsmI	GAATGC	1 cut(s)	374
BsnI	GGCC	1 cut(s)	442
Bso31I	GGTCTC	1 cut(s)	572
Bsp1286I	GDGCHC	4 cut(s)	128, 134, 725, 876
Bsp13I	TCCGGA	1 cut(s)	659
Bsp143I	GATC	9 cut(s)	147, 251, 314, 345, 728, 895, 933, 948, 978
BspACI	CCGC	5 cut(s)	87, 140, 324, 666, 923
BspANI	GGCC	1 cut(s)	442
BspCNI	CTCAG	1 cut(s)	280
BspDI	ATCGAT	1 cut(s)	929
BspEI	TCCGGA	1 cut(s)	659
BspFNI	CGCG	3 cut(s)	74, 324, 923
BspHI	TCATGA	1 cut(s)	207
BspLI	GGNNCC	6 cut(s)	101, 215, 456, 602, 722, 740
BspPI	GGATC	2 cut(s)	259, 903
BspT107I	GGYRCC	1 cut(s)	720
BspTNI	GGTCTC	1 cut(s)	572
BsrBI	CCGCTC	1 cut(s)	140
BsrDI	GCAATG	1 cut(s)	565
BsrI	ACTGG	1 cut(s)	270
BssECI	CCNNGG	1 cut(s)	168
BssMI	GATC	9 cut(s)	147, 251, 314, 345, 728, 895, 933, 948, 978
BssNI	GRCGYC	1 cut(s)	396
BssSI	CACGAG	2 cut(s)	127, 875
BssT1I	CCWWGG	1 cut(s)	168
Bst2BI	CACGAG	2 cut(s)	127, 875
Bst4CI	ACNGT	4 cut(s)	382, 454, 770, 825
Bst6I	CTCTTC	3 cut(s)	110, 463, 897
BstACI	GRCGYC	1 cut(s)	396
BstC8I	GCNNGC	2 cut(s)	322, 487
BstDEI	CTNAG	2 cut(s)	288, 685
BstFNI	CGCG	3 cut(s)	74, 324, 923
BstHHI	GCGC	1 cut(s)	714
BstKTI	GATC	9 cut(s)	150, 254, 317, 348, 731, 898, 936, 951, 981
BstMAI	GTCTC	6 cut(s)	39, 179, 388, 411, 572, 637
BstMBI	GATC	9 cut(s)	147, 251, 314, 345, 728, 895, 933, 948, 978
BstMWI	GCNNNNNNNGC	2 cut(s)	491, 720
BstSCI	CCNGG	2 cut(s)	489, 596
BstSFI	CTRYAG	1 cut(s)	118
BstSLI	GKGCMC	2 cut(s)	134, 725
BstUI	CGCG	3 cut(s)	74, 324, 923
BstV1I	GCAGC	4 cut(s)	184, 365, 397, 688
BstX2I	RGATCY	1 cut(s)	948
BstXI	CCANNNNNNTGG	1 cut(s)	611
BstYI	RGATCY	1 cut(s)	948
Bsu15I	ATCGAT	1 cut(s)	929
BsuRI	GGCC	1 cut(s)	442
BsuTUI	ATCGAT	1 cut(s)	929
BtsIMutI	CAGTG	3 cut(s)	277, 378, 775
Cac8I	GCNNGC	2 cut(s)	322, 487
CciI	TCATGA	1 cut(s)	207
CfoI	GCGC	1 cut(s)	714
Cfr13I	GGNCC	3 cut(s)	156, 440, 739
ClaI	ATCGAT	1 cut(s)	929
CseI	GACGC	1 cut(s)	404
CviAII	CATG	2 cut(s)	208, 817
DdeI	CTNAG	2 cut(s)	288, 685
DpnI	GATC	9 cut(s)	149, 253, 316, 347, 730, 897, 935, 950, 980
DpnII	GATC	9 cut(s)	147, 251, 314, 345, 728, 895, 933, 948, 978
Eam1104I	CTCTTC	3 cut(s)	110, 463, 897
EarI	CTCTTC	3 cut(s)	110, 463, 897
Ecl136II	GAGCTC	2 cut(s)	126, 874
Eco130I	CCWWGG	1 cut(s)	168
Eco24I	GRGCYC	2 cut(s)	128, 876
Eco31I	GGTCTC	1 cut(s)	572
Eco47I	GGWCC	2 cut(s)	156, 739
Eco53kI	GAGCTC	2 cut(s)	126, 874
EcoICRI	GAGCTC	2 cut(s)	126, 874
EcoRI	GAATTC	1 cut(s)	829
EcoT14I	CCWWGG	1 cut(s)	168
EcoT38I	GRGCYC	2 cut(s)	128, 876
ErhI	CCWWGG	1 cut(s)	168
FaeI	CATG	2 cut(s)	211, 820
FaiI	YATR	5 cut(s)	194, 209, 281, 818, 888
FaqI	GGGAC	3 cut(s)	657, 752, 834
FatI	CATG	2 cut(s)	207, 816
FauI	CCCGC	1 cut(s)	317
FbaI	TGATCA	1 cut(s)	933
Fnu4HI	GCNGC	5 cut(s)	88, 198, 354, 411, 702
FriOI	GRGCYC	2 cut(s)	128, 876
Fsp4HI	GCNGC	5 cut(s)	88, 198, 354, 411, 702
FspBI	CTAG	7 cut(s)	135, 263, 407, 414, 630, 726, 852
GlaI	GCGC	1 cut(s)	713
GluI	GCNGC	5 cut(s)	88, 198, 354, 411, 702
HaeIII	GGCC	1 cut(s)	442
HapII	CCGG	3 cut(s)	490, 597, 660
HgaI	GACGC	1 cut(s)	404
HhaI	GCGC	1 cut(s)	714
Hin1I	GRCGYC	1 cut(s)	396
Hin1II	CATG	2 cut(s)	211, 820
Hin6I	GCGC	1 cut(s)	712
HinP1I	GCGC	1 cut(s)	712
HincII	GTYRAC	1 cut(s)	340
HindII	GTYRAC	1 cut(s)	340
HinfI	GANTC	6 cut(s)	9, 187, 419, 473, 615, 926
HpaII	CCGG	3 cut(s)	490, 597, 660
HphI	GGTGA	1 cut(s)	986
Hpy166II	GTNNAC	1 cut(s)	340
Hpy188I	TCNGA	5 cut(s)	576, 638, 754, 835, 983
Hpy8I	GTNNAC	1 cut(s)	340
HpyAV	CCTTC	2 cut(s)	521, 557
HpyCH4III	ACNGT	4 cut(s)	382, 454, 770, 825
HpyCH4V	TGCA	5 cut(s)	60, 485, 627, 890, 993
HpyF10VI	GCNNNNNNNGC	2 cut(s)	491, 720
HpyF3I	CTNAG	2 cut(s)	288, 685
Hsp92I	GRCGYC	1 cut(s)	396
Hsp92II	CATG	2 cut(s)	211, 820
HspAI	GCGC	1 cut(s)	712
Kpn2I	TCCGGA	1 cut(s)	659
Ksp22I	TGATCA	1 cut(s)	933
Kzo9I	GATC	9 cut(s)	147, 251, 314, 345, 728, 895, 933, 948, 978
LmnI	GCTCC	4 cut(s)	15, 123, 219, 600
Lsp1109I	GCAGC	4 cut(s)	184, 365, 397, 688
LweI	GCATC	2 cut(s)	69, 614
MaeI	CTAG	7 cut(s)	135, 263, 407, 414, 630, 726, 852
MaeIII	GTNAC	3 cut(s)	65, 77, 283
MalI	GATC	9 cut(s)	149, 253, 316, 347, 730, 897, 935, 950, 980
MbiI	CCGCTC	1 cut(s)	140
MboI	GATC	9 cut(s)	147, 251, 314, 345, 728, 895, 933, 948, 978
MflI	RGATCY	1 cut(s)	948
MhlI	GDGCHC	4 cut(s)	128, 134, 725, 876
MluCI	AATT	4 cut(s)	540, 829, 917, 999
MlyI	GAGTC	2 cut(s)	181, 413
MmeI	TCCRAC	1 cut(s)	858
MnlI	CCTC	7 cut(s)	113, 136, 147, 204, 433, 593, 886
MroI	TCCGGA	1 cut(s)	659
MroXI	GAANNNNTTC	2 cut(s)	104, 472
MseI	TTAA	3 cut(s)	401, 798, 1002
MspI	CCGG	3 cut(s)	490, 597, 660
MspR9I	CCNGG	2 cut(s)	491, 598
Mva1269I	GAATGC	1 cut(s)	374
MvnI	CGCG	3 cut(s)	74, 324, 923
MwoI	GCNNNNNNNGC	2 cut(s)	491, 720
NciI	CCSGG	2 cut(s)	491, 598
NdeII	GATC	9 cut(s)	147, 251, 314, 345, 728, 895, 933, 948, 978
NlaIII	CATG	2 cut(s)	211, 820
NlaIV	GGNNCC	6 cut(s)	101, 215, 456, 602, 722, 740
NmuCI	GTSAC	1 cut(s)	65
PagI	TCATGA	1 cut(s)	207
PcsI	WCGNNNNNNNCGW	2 cut(s)	156, 231
PctI	GAATGC	1 cut(s)	374
PdmI	GAANNNNTTC	2 cut(s)	104, 472
PfeI	GAWTC	4 cut(s)	9, 473, 615, 926
PflFI	GACNNNGTC	1 cut(s)	839
PfoI	TCCNGGA	1 cut(s)	596
PkrI	GCNGC	5 cut(s)	89, 199, 355, 412, 703
PleI	GAGTC	2 cut(s)	181, 413
PpsI	GAGTC	2 cut(s)	181, 413
PshBI	ATTAAT	1 cut(s)	1002
Psp124BI	GAGCTC	2 cut(s)	128, 876
PspN4I	GGNNCC	6 cut(s)	101, 215, 456, 602, 722, 740
PspPI	GGNCC	3 cut(s)	156, 440, 739
PsuI	RGATCY	1 cut(s)	948
PsyI	GACNNNGTC	1 cut(s)	839
SacI	GAGCTC	2 cut(s)	128, 876
SaqAI	TTAA	3 cut(s)	401, 798, 1002
SatI	GCNGC	5 cut(s)	88, 198, 354, 411, 702
Sau3AI	GATC	9 cut(s)	147, 251, 314, 345, 728, 895, 933, 948, 978
Sau96I	GGNCC	3 cut(s)	156, 440, 739
SchI	GAGTC	2 cut(s)	181, 413
ScrFI	CCNGG	2 cut(s)	491, 598
SduI	GDGCHC	4 cut(s)	128, 134, 725, 876
SfaNI	GCATC	2 cut(s)	69, 614
SfcI	CTRYAG	1 cut(s)	118
SinI	GGWCC	2 cut(s)	156, 739
SmlI	CTYRAG	2 cut(s)	547, 619
SmoI	CTYRAG	2 cut(s)	547, 619
SpeI	ACTAGT	1 cut(s)	629
Sse9I	AATT	4 cut(s)	540, 829, 917, 999
SsiI	CCGC	5 cut(s)	87, 140, 324, 666, 923
SspMI	CTAG	7 cut(s)	135, 263, 407, 414, 630, 726, 852
SstI	GAGCTC	2 cut(s)	128, 876
StyD4I	CCNGG	2 cut(s)	489, 596
StyI	CCWWGG	1 cut(s)	168
TaaI	ACNGT	4 cut(s)	382, 454, 770, 825
TaqI	TCGA	5 cut(s)	534, 866, 912, 929, 968
TasI	AATT	4 cut(s)	540, 829, 917, 999
TauI	GCSGC	1 cut(s)	90
TfiI	GAWTC	4 cut(s)	9, 473, 615, 926
Tru1I	TTAA	3 cut(s)	401, 798, 1002
Tru9I	TTAA	3 cut(s)	401, 798, 1002
TscAI	CASTG	3 cut(s)	277, 385, 775
TseFI	GTSAC	1 cut(s)	65
TseI	GCWGC	4 cut(s)	197, 353, 410, 701
Tsp45I	GTSAC	1 cut(s)	65
TspDTI	ATGAA	2 cut(s)	381, 576
TspGWI	ACGGA	1 cut(s)	148
TspRI	CASTG	3 cut(s)	277, 385, 775
Tth111I	GACNNNGTC	1 cut(s)	839
VpaK11BI	GGWCC	2 cut(s)	156, 739
VspI	ATTAAT	1 cut(s)	1002
XapI	RAATTY	1 cut(s)	829
XbaI	TCTAGA	1 cut(s)	262
XmnI	GAANNNNTTC	2 cut(s)	104, 472
XspI	CTAG	7 cut(s)	135, 263, 407, 414, 630, 726, 852

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.