Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009122

Physical Location & Seq

Genomic Coordinates Reverse (-)

17204385 .. 17206033

Gene Structure 1649 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G36430.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 996 bp

ATGGCAAGACTCACGAGCTTTCTCCTTCTTCTTTCTCTCATCTGCTTTGTCCCTCTCTGTCTCTGCGACAAGAGCTATGGAGGCAAACTTTTCCCGGGTTATTACGCCCATTCATGCCCACAAGTCAATGAGATCGTGAGATCAGTTGTAGCTAAAGCTGTTGCTAGAGAGACACGTATGGCTGCTTCCTTGTTGAGACTTCATTTCCACGACTGTTTCGTTCAGGGTTGTGATGGCTCTTTGCTTCTAGACAGCAGTGGAAGGGTAGCGACTGAGAAAAACTCAAACCCTAACAGCAAATCAGCTCGTGGGTTTGACGTAGTTGACCAAATCAAAGCTGAACTGGAGAAACAATGCCCTGGAACTGTTTCTTGCGCTGATGTTCTTACCCTAGCCGCTAGAGACTCCTCTGTTCTTACCGGTGGACCAAGTTGGGTTGTTCCATTGGGAAGAAGAGATTCAAGAAGTGCAAGCTTGAGTCAATCGAACAACAACATCCCTGCACCAAACAACACTTTCCAGACCATTCTATCTAAGTTTAACCGTCAAGGACTTGATATCACTGACCTTGTCGCTCTCTCCGGTAGTCACACAATCGGATTCTCGAGATGCACGAGTTTCAGACAGAGGTTGTACAACCAGTCCGGAAACGGCAGTCCAGACATGACATTGGAACAATCCTTCGCTGCTAACTTGCGCCAACGGTGTCCAAAATCCGGTGGGGACCAGATTCTCTCGGTGCTAGACATCATCAGCGCCGCGAGCTTCGACAACAGCTACTTCAAGAACTTGATAGAGAACAAGGGGTTGTTGAACTCGGACCAAGTTCTGTTCAGCAGTAACGAGAAATCGAGAGAGCTTGTGAAGAAGTATGCAGAAGATCAAGGAGAGTTTTTTGAGCAATTTGCGGAATCGATGATCAAGATGGGAAATATCTCTCCCTTGACAGGTTCTAGTGGCGAAATCAGGAAGAATTGCAGGAAGATTAACTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004601 GO:0005575 GO:0005618 GO:0005623 GO:0005975 GO:0005976 GO:0006725 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009505 GO:0009636 GO:0009698 GO:0009699 GO:0009791 GO:0009808 GO:0009809 GO:0009845 GO:0009987 GO:0010154 GO:0010383 GO:0016209 GO:0016491 GO:0016684 GO:0016998 GO:0019438 GO:0019748 GO:0022414 GO:0030312 GO:0032501 GO:0032502 GO:0032504 GO:0042221 GO:0043170 GO:0044036 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044347 GO:0044464 GO:0044550 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051716 GO:0055114 GO:0061458 GO:0070887 GO:0071554 GO:0071704 GO:0071944 GO:0080001 GO:0090351 GO:0097237 GO:0098754 GO:0098869 GO:1901360 GO:1901362 GO:1901576 GO:1990748

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

peroxidase

Protein Analysis

331

Amino Acids

36.16

Weight (kDa)

8.73

Isoelectric Point (pI)

47.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
peroxidase	PF00141	46 - 294	1.1e-86	Peroxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009122)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18140 AT2G18150 AT4G36430 AT5G66390
fragaria_vesca	FvH4_1g12490
malus_domestica	MD02G1138900.v1.1 MD02G1139300.v1.1 MD15G1252300.v1.1
prunus_persica	Prupe.7G161900_v2.0.a1
pyrus_communis	pycom02g11000 pycom15g22220
rosa_chinensis	RchiOBHm_Chr2g0100381
rosa_laevigata	RLG00000016969
rosa_multiflora	Rmu_sc0001095.1_g000016 Rmu_sc0004164.1_g000002 Rmu_sc0027393.1_g000001
rosa_roxburghii	Rroxscaffold_2G00142290
rosa_rugosa	Rorug02G0087800
rosa_samantha	Rh2AG137000 Rh2CG142400 Rh2DG142400
rosa_wichuraiana	Rw2G010730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	761
AccIII	TCCGGA	1 cut(s)	644
AciI	CCGC	3 cut(s)	396, 759, 908
AfaI	GTAC	1 cut(s)	635
AfiI	CCNNNNNNNGG	2 cut(s)	716, 947
AflIII	ACRYGT	1 cut(s)	173
AgeI	ACCGGT	1 cut(s)	419
AgsI	TTSAA	3 cut(s)	462, 784, 814
AjnI	CCWGG	1 cut(s)	358
Alw26I	GTCTC	4 cut(s)	65, 164, 190, 396
Ama87I	CYCGRG	2 cut(s)	94, 604
Aor13HI	TCCGGA	1 cut(s)	644
ApeKI	GCWGC	2 cut(s)	182, 686
AsiGI	ACCGGT	1 cut(s)	419
Asp700I	GAANNNNTTC	2 cut(s)	367, 457
AspLEI	GCGC	3 cut(s)	377, 699, 758
AspS9I	GGNCC	3 cut(s)	425, 724, 820
AsuC2I	CCSGG	2 cut(s)	95, 96
AvaI	CYCGRG	2 cut(s)	94, 604
AvaII	GGWCC	3 cut(s)	425, 724, 820
BarI	GAAGNNNNNNTAC	2 cut(s)	169, 201
BauI	CACGAG	3 cut(s)	13, 306, 613
BbvI	GCAGC	2 cut(s)	169, 673
BccI	CCATC	2 cut(s)	227, 919
BceAI	ACGGC	1 cut(s)	667
BciT130I	CCWGG	1 cut(s)	360
BclI	TGATCA	1 cut(s)	918
BcnI	CCSGG	2 cut(s)	95, 96
BcoDI	GTCTC	4 cut(s)	65, 164, 190, 396
BfaI	CTAG	6 cut(s)	165, 248, 392, 399, 743, 954
BfoI	RGCGCY	1 cut(s)	759
BisI	GCNGC	4 cut(s)	183, 396, 687, 759
BlsI	GCNGC	4 cut(s)	184, 397, 688, 760
Bme1390I	CCNGG	3 cut(s)	95, 96, 360
Bme18I	GGWCC	3 cut(s)	425, 724, 820
BmeT110I	CYCGRG	2 cut(s)	94, 604
BmgT120I	GGNCC	3 cut(s)	425, 724, 820
BmiI	GGNNCC	1 cut(s)	725
BmrFI	CCNGG	3 cut(s)	95, 96, 360
BmsI	GCATC	1 cut(s)	599
BplI	GAGNNNNNCTC	2 cut(s)	266, 298
BpmI	CTGGAG	1 cut(s)	365
BpuEI	CTTGAG	1 cut(s)	496
BpuMI	CCSGG	2 cut(s)	95, 96
Bsa29I	ATCGAT	1 cut(s)	914
BsaAI	YACGTR	1 cut(s)	176
BsaJI	CCNNGG	2 cut(s)	94, 358
BsaWI	WCCGGW	4 cut(s)	419, 581, 644, 716
Bsc4I	CCNNNNNNNGG	2 cut(s)	716, 947
Bse118I	RCCGGY	1 cut(s)	419
Bse1I	ACTGG	2 cut(s)	348, 640
BseAI	TCCGGA	1 cut(s)	644
BseBI	CCWGG	1 cut(s)	360
BseCI	ATCGAT	1 cut(s)	914
BseDI	CCNNGG	2 cut(s)	94, 358
BseGI	GGATG	1 cut(s)	495
BseLI	CCNNNNNNNGG	2 cut(s)	716, 947
BseMII	CTCAG	1 cut(s)	264
BseNI	ACTGG	2 cut(s)	348, 640
BseRI	GAGGAG	1 cut(s)	397
BseXI	GCAGC	2 cut(s)	169, 673
BsgI	GTGCAG	1 cut(s)	486
Bsh1236I	CGCG	1 cut(s)	761
BshTI	ACCGGT	1 cut(s)	419
BshVI	ATCGAT	1 cut(s)	914
BsiHKCI	CYCGRG	2 cut(s)	94, 604
BsiSI	CCGG	5 cut(s)	95, 420, 582, 645, 717
BslFI	GGGAC	2 cut(s)	35, 737
BslI	CCNNNNNNNGG	2 cut(s)	716, 947
BsmAI	GTCTC	4 cut(s)	65, 164, 190, 396
BsmFI	GGGAC	2 cut(s)	35, 737
BsoBI	CYCGRG	2 cut(s)	94, 604
Bsp13I	TCCGGA	1 cut(s)	644
Bsp1407I	TGTACA	1 cut(s)	633
Bsp143I	GATC	4 cut(s)	132, 140, 880, 918
BspACI	CCGC	3 cut(s)	396, 759, 908
BspCNI	CTCAG	1 cut(s)	265
BspDI	ATCGAT	1 cut(s)	914
BspEI	TCCGGA	1 cut(s)	644
BspFNI	CGCG	1 cut(s)	761
BspLI	GGNNCC	1 cut(s)	725
BsrFI	RCCGGY	1 cut(s)	419
BsrGI	TGTACA	1 cut(s)	633
BsrI	ACTGG	2 cut(s)	348, 640
BssAI	RCCGGY	1 cut(s)	419
BssECI	CCNNGG	2 cut(s)	94, 358
BssMI	GATC	4 cut(s)	132, 140, 880, 918
BssSI	CACGAG	3 cut(s)	13, 306, 613
Bst2BI	CACGAG	3 cut(s)	13, 306, 613
Bst2UI	CCWGG	1 cut(s)	360
Bst4CI	ACNGT	4 cut(s)	215, 367, 545, 705
Bst6I	CTCTTC	1 cut(s)	448
BstAUI	TGTACA	1 cut(s)	633
BstBAI	YACGTR	1 cut(s)	176
BstC8I	GCNNGC	2 cut(s)	472, 763
BstDEI	CTNAG	2 cut(s)	273, 534
BstF5I	GGATG	1 cut(s)	495
BstFNI	CGCG	1 cut(s)	761
BstH2I	RGCGCY	1 cut(s)	759
BstHHI	GCGC	3 cut(s)	377, 699, 758
BstKTI	GATC	4 cut(s)	135, 143, 883, 921
BstMAI	GTCTC	4 cut(s)	65, 164, 190, 396
BstMBI	GATC	4 cut(s)	132, 140, 880, 918
BstMWI	GCNNNNNNNGC	3 cut(s)	72, 81, 762
BstNI	CCWGG	1 cut(s)	360
BstSCI	CCNGG	3 cut(s)	93, 94, 358
BstUI	CGCG	1 cut(s)	761
BstV1I	GCAGC	2 cut(s)	169, 673
Bsu15I	ATCGAT	1 cut(s)	914
BsuTUI	ATCGAT	1 cut(s)	914
BtsCI	GGATG	1 cut(s)	495
BtsI	GCAGTG	1 cut(s)	262
BtsIMutI	CAGTG	2 cut(s)	262, 561
Cac8I	GCNNGC	2 cut(s)	472, 763
CfoI	GCGC	3 cut(s)	377, 699, 758
Cfr10I	RCCGGY	1 cut(s)	419
Cfr13I	GGNCC	3 cut(s)	425, 724, 820
Cfr9I	CCCGGG	1 cut(s)	94
ClaI	ATCGAT	1 cut(s)	914
Csp6I	GTAC	1 cut(s)	634
CspAI	ACCGGT	1 cut(s)	419
CviAII	CATG	2 cut(s)	114, 664
CviQI	GTAC	1 cut(s)	634
DdeI	CTNAG	2 cut(s)	273, 534
DpnI	GATC	4 cut(s)	134, 142, 882, 920
DpnII	GATC	4 cut(s)	132, 140, 880, 918
Eam1104I	CTCTTC	1 cut(s)	448
EarI	CTCTTC	1 cut(s)	448
Eco32I	GATATC	1 cut(s)	559
Eco47I	GGWCC	3 cut(s)	425, 724, 820
Eco88I	CYCGRG	2 cut(s)	94, 604
EcoRII	CCWGG	1 cut(s)	358
EcoRV	GATATC	1 cut(s)	559
FaeI	CATG	2 cut(s)	117, 667
FaiI	YATR	5 cut(s)	78, 115, 179, 665, 873
FaqI	GGGAC	2 cut(s)	35, 737
FatI	CATG	2 cut(s)	113, 663
FbaI	TGATCA	1 cut(s)	918
Fnu4HI	GCNGC	4 cut(s)	183, 396, 687, 759
FokI	GGATG	1 cut(s)	482
Fsp4HI	GCNGC	4 cut(s)	183, 396, 687, 759
FspBI	CTAG	6 cut(s)	165, 248, 392, 399, 743, 954
GlaI	GCGC	3 cut(s)	376, 698, 757
GluI	GCNGC	4 cut(s)	183, 396, 687, 759
GsuI	CTGGAG	1 cut(s)	365
HaeII	RGCGCY	1 cut(s)	759
HapII	CCGG	5 cut(s)	95, 420, 582, 645, 717
HhaI	GCGC	3 cut(s)	377, 699, 758
Hin1II	CATG	2 cut(s)	117, 667
Hin6I	GCGC	3 cut(s)	375, 697, 756
HinP1I	GCGC	3 cut(s)	375, 697, 756
HincII	GTYRAC	1 cut(s)	325
HindII	GTYRAC	1 cut(s)	325
HindIII	AAGCTT	1 cut(s)	472
HinfI	GANTC	7 cut(s)	9, 404, 458, 478, 600, 730, 911
HpaII	CCGG	5 cut(s)	95, 420, 582, 645, 717
Hpy166II	GTNNAC	2 cut(s)	325, 425
Hpy188I	TCNGA	3 cut(s)	599, 623, 820
Hpy8I	GTNNAC	2 cut(s)	325, 425
HpyAV	CCTTC	3 cut(s)	35, 255, 691
HpyCH4III	ACNGT	4 cut(s)	215, 367, 545, 705
HpyCH4IV	ACGT	2 cut(s)	175, 318
HpyCH4V	TGCA	5 cut(s)	470, 503, 612, 875, 978
HpyF10VI	GCNNNNNNNGC	3 cut(s)	72, 81, 762
HpyF3I	CTNAG	2 cut(s)	273, 534
HpySE526I	ACGT	2 cut(s)	175, 318
Hsp92II	CATG	2 cut(s)	117, 667
HspAI	GCGC	3 cut(s)	375, 697, 756
Kpn2I	TCCGGA	1 cut(s)	644
Ksp22I	TGATCA	1 cut(s)	918
Kzo9I	GATC	4 cut(s)	132, 140, 880, 918
Lsp1109I	GCAGC	2 cut(s)	169, 673
LweI	GCATC	1 cut(s)	599
MaeI	CTAG	6 cut(s)	165, 248, 392, 399, 743, 954
MaeII	ACGT	2 cut(s)	175, 318
MaeIII	GTNAC	2 cut(s)	587, 839
MalI	GATC	4 cut(s)	134, 142, 882, 920
MboI	GATC	4 cut(s)	132, 140, 880, 918
MboII	GAAGA	7 cut(s)	20, 462, 465, 877, 890, 982, 994
MluCI	AATT	2 cut(s)	902, 973
MlyI	GAGTC	3 cut(s)	3, 398, 487
MnlI	CCTC	4 cut(s)	63, 74, 418, 621
MroI	TCCGGA	1 cut(s)	644
MroXI	GAANNNNTTC	2 cut(s)	367, 457
MseI	TTAA	2 cut(s)	540, 987
MspI	CCGG	5 cut(s)	95, 420, 582, 645, 717
MspR9I	CCNGG	3 cut(s)	95, 96, 360
MvaI	CCWGG	1 cut(s)	360
MvnI	CGCG	1 cut(s)	761
MwoI	GCNNNNNNNGC	3 cut(s)	72, 81, 762
NciI	CCSGG	2 cut(s)	95, 96
NdeII	GATC	4 cut(s)	132, 140, 880, 918
NlaIII	CATG	2 cut(s)	117, 667
NlaIV	GGNNCC	1 cut(s)	725
NmuCI	GTSAC	1 cut(s)	587
PaeR7I	CTCGAG	1 cut(s)	604
PcsI	WCGNNNNNNNCGW	2 cut(s)	216, 611
PdmI	GAANNNNTTC	2 cut(s)	367, 457
PfeI	GAWTC	4 cut(s)	458, 600, 730, 911
PflFI	GACNNNGTC	1 cut(s)	569
PinAI	ACCGGT	1 cut(s)	419
PkrI	GCNGC	4 cut(s)	184, 397, 688, 760
PleI	GAGTC	3 cut(s)	3, 398, 486
PpsI	GAGTC	3 cut(s)	3, 398, 486
Ppu21I	YACGTR	1 cut(s)	176
Psp6I	CCWGG	1 cut(s)	358
PspGI	CCWGG	1 cut(s)	358
PspN4I	GGNNCC	1 cut(s)	725
PspPI	GGNCC	3 cut(s)	425, 724, 820
PsyI	GACNNNGTC	1 cut(s)	569
RsaI	GTAC	1 cut(s)	635
RsaNI	GTAC	1 cut(s)	634
SaqAI	TTAA	2 cut(s)	540, 987
SatI	GCNGC	4 cut(s)	183, 396, 687, 759
Sau3AI	GATC	4 cut(s)	132, 140, 880, 918
Sau96I	GGNCC	3 cut(s)	425, 724, 820
SchI	GAGTC	3 cut(s)	3, 398, 487
ScrFI	CCNGG	3 cut(s)	95, 96, 360
SfaNI	GCATC	1 cut(s)	599
Sfr274I	CTCGAG	1 cut(s)	604
SinI	GGWCC	3 cut(s)	425, 724, 820
SlaI	CTCGAG	1 cut(s)	604
SmaI	CCCGGG	1 cut(s)	96
SmlI	CTYRAG	2 cut(s)	475, 604
SmoI	CTYRAG	2 cut(s)	475, 604
Sse9I	AATT	2 cut(s)	902, 973
SsiI	CCGC	3 cut(s)	396, 759, 908
SspMI	CTAG	6 cut(s)	165, 248, 392, 399, 743, 954
StyD4I	CCNGG	3 cut(s)	93, 94, 358
TaaI	ACNGT	4 cut(s)	215, 367, 545, 705
TaiI	ACGT	2 cut(s)	178, 321
TaqI	TCGA	5 cut(s)	485, 605, 768, 851, 914
TasI	AATT	2 cut(s)	902, 973
TatI	WGTACW	1 cut(s)	633
TauI	GCSGC	2 cut(s)	398, 761
TfiI	GAWTC	4 cut(s)	458, 600, 730, 911
Tru1I	TTAA	2 cut(s)	540, 987
Tru9I	TTAA	2 cut(s)	540, 987
TscAI	CASTG	2 cut(s)	262, 568
TseFI	GTSAC	1 cut(s)	587
TseI	GCWGC	2 cut(s)	182, 686
Tsp45I	GTSAC	1 cut(s)	587
TspDTI	ATGAA	2 cut(s)	102, 191
TspMI	CCCGGG	1 cut(s)	94
TspRI	CASTG	2 cut(s)	262, 568
Tth111I	GACNNNGTC	1 cut(s)	569
VpaK11BI	GGWCC	3 cut(s)	425, 724, 820
XbaI	TCTAGA	1 cut(s)	247
XhoI	CTCGAG	1 cut(s)	604
XmaI	CCCGGG	1 cut(s)	94
XmnI	GAANNNNTTC	2 cut(s)	367, 457
XspI	CTAG	6 cut(s)	165, 248, 392, 399, 743, 954

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.