Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0009122

Physical Location & Seq

Genomic Coordinates Forward (+)

16765500 .. 16767295

Gene Structure 1796 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G161900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1011 bp

ATGGCTCAGTCTTTGAGCTTCCTTCTAGCTCTTTCTCTTCTTGCCCTTGTCCCACTTTGTTTCTGTGATAAAACTCTTGGTGGGTATCTCTACCCACAGTTTTATGACCACTCCTGCCCTAGAGCAACAGAGATTGTAAAGTCTGTTGTTGCCAAGGCTGTTGCAAGAGAAGCTCGCATGGCTGCCTCTTTGCTTAGGCTGCATTTCCATGACTGCTTTGTACAGGGTTGTGATGCATCAATTCTGTTGGACAGCAGCAAGAACATAATCACGGAGAAGAGGTCTGTCCCAAACCAGAATTCAGCTCGAGGGTTCGAAGTAATCGATGAAATCAAGTCTGCATTAGAGAAAGAGTGCCCCAACAGAGTGTCCTGTGCTGACATTTTGGCTCTTGCTGCTAGAGACTCCACTGTGCTATCTGGGGGGCCAAACTGGGAGGTTCCACTAGGCAGAAGAGATTCAAAAGGAGCAAGTTTAAGTGGCTCCAACAACAACATCCCTGCTCCAAACAACACTTTCCAAACTGTTCTCACCAAGTTCAAGAGGCAAAAGCTCAACATTGTTGATCTTGTGGCACTATCTGGAAGCCACACCATTGGAAATGCCAGATGCACCTCATTCAGGCAGAGGCTTTACAACCAGTCAGGCAATGGCTTAGCTGACTTCACCCTTGACCAATCATATGCTGCACAGTTGAGAACCAGGTGCCCAAGATCTGGTGGAGACCAAACCCTGTTTTTCTTGGACTTTGTCAGCCCAACGAAGTTTGACAACAGCTACTTCAAGAACTTGTTGGCTTCCAAGGGCCTCCTGAACTCAGATGAAATTCTTATCACGAAGAGTGAAGTGACAAAGCAATTGGTTCAACAGTATGCTGAGAACACTGAGCTTTTCTTTGAGCAGTTTGCCAAGTCCATGGTGAAGATGGGAAATATTTCCCCACTTACAGGGTCAAGGGGAGAGATCAGAAAGAGATGCAGGAAGATCAACTCAATCAATCAGAATGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004601 GO:0005575 GO:0005618 GO:0005623 GO:0005975 GO:0005976 GO:0006725 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009505 GO:0009636 GO:0009698 GO:0009699 GO:0009791 GO:0009808 GO:0009809 GO:0009845 GO:0009987 GO:0010154 GO:0010383 GO:0016209 GO:0016491 GO:0016684 GO:0016998 GO:0019438 GO:0019748 GO:0022414 GO:0030312 GO:0032501 GO:0032502 GO:0032504 GO:0042221 GO:0043170 GO:0044036 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044260 GO:0044347 GO:0044464 GO:0044550 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051716 GO:0055114 GO:0061458 GO:0070887 GO:0071554 GO:0071704 GO:0071944 GO:0080001 GO:0090351 GO:0097237 GO:0098754 GO:0098869 GO:1901360 GO:1901362 GO:1901576 GO:1990748

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

peroxidase

Protein Analysis

337

Amino Acids

37.08

Weight (kDa)

9.21

Isoelectric Point (pI)

49.14

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009122)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18140 AT2G18150 AT4G36430 AT5G66390
fragaria_vesca	FvH4_1g12490
malus_domestica	MD02G1138900.v1.1 MD02G1139300.v1.1 MD15G1252300.v1.1
prunus_persica	Prupe.7G161900_v2.0.a1
pyrus_communis	pycom02g11000 pycom15g22220
rosa_chinensis	RchiOBHm_Chr2g0100381
rosa_laevigata	RLG00000016969
rosa_multiflora	Rmu_sc0001095.1_g000016 Rmu_sc0004164.1_g000002 Rmu_sc0027393.1_g000001
rosa_roxburghii	Rroxscaffold_2G00142290
rosa_rugosa	Rorug02G0087800
rosa_samantha	Rh2AG137000 Rh2CG142400 Rh2DG142400
rosa_wichuraiana	Rw2G010730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	705
AccB7I	CCANNNNNTGG	1 cut(s)	716
AcsI	RAATTY	2 cut(s)	298, 825
AfaI	GTAC	1 cut(s)	222
AfiI	CCNNNNNNNGG	3 cut(s)	621, 716, 947
AgsI	TTSAA	4 cut(s)	462, 541, 784, 866
AjnI	CCWGG	1 cut(s)	701
AjuI	GAANNNNNNNTTGG	2 cut(s)	283, 315
AluBI	AGCT	8 cut(s)	18, 29, 173, 305, 553, 659, 777, 889
AluI	AGCT	8 cut(s)	18, 29, 173, 305, 553, 659, 777, 889
Alw26I	GTCTC	2 cut(s)	396, 717
Ama87I	CYCGRG	1 cut(s)	306
AoxI	GGCC	2 cut(s)	425, 805
ApeKI	GCWGC	5 cut(s)	182, 199, 255, 395, 686
ApoI	RAATTY	2 cut(s)	298, 825
Asp700I	GAANNNNTTC	2 cut(s)	457, 934
AspS9I	GGNCC	2 cut(s)	425, 805
AsuHPI	GGTGA	3 cut(s)	523, 658, 931
AsuII	TTCGAA	1 cut(s)	315
AvaI	CYCGRG	1 cut(s)	306
BaeGI	GKGCMC	2 cut(s)	359, 710
BanI	GGYRCC	1 cut(s)	705
BbvI	GCAGC	5 cut(s)	169, 186, 267, 382, 673
BccI	CCATC	1 cut(s)	919
BciT130I	CCWGG	1 cut(s)	703
BcoDI	GTCTC	2 cut(s)	396, 717
BfaI	CTAG	4 cut(s)	26, 120, 399, 446
BglII	AGATCT	1 cut(s)	713
BisI	GCNGC	5 cut(s)	183, 200, 256, 396, 687
BlpI	GCTNAGC	1 cut(s)	655
BlsI	GCNGC	5 cut(s)	184, 201, 257, 397, 688
Bme1390I	CCNGG	1 cut(s)	703
BmeT110I	CYCGRG	1 cut(s)	306
BmgT120I	GGNCC	2 cut(s)	425, 805
BmiI	GGNNCC	4 cut(s)	426, 441, 484, 707
BmrFI	CCNGG	1 cut(s)	703
BmrI	ACTGGG	1 cut(s)	442
BmsI	GCATC	4 cut(s)	223, 245, 599, 965
BmuI	ACTGGG	1 cut(s)	442
Bpu10I	CCTNAGC	1 cut(s)	194
Bpu1102I	GCTNAGC	1 cut(s)	655
Bpu14I	TTCGAA	1 cut(s)	315
Bsa29I	ATCGAT	1 cut(s)	324
BsaI	GGTCTC	1 cut(s)	717
BsaJI	CCNNGG	3 cut(s)	153, 801, 915
BsaXI	ACNNNNNCTCC	2 cut(s)	266, 296
Bsc4I	CCNNNNNNNGG	3 cut(s)	621, 716, 947
Bse1I	ACTGG	2 cut(s)	437, 640
Bse3DI	GCAATG	1 cut(s)	655
BseBI	CCWGG	1 cut(s)	703
BseCI	ATCGAT	1 cut(s)	324
BseDI	CCNNGG	3 cut(s)	153, 801, 915
BseGI	GGATG	1 cut(s)	495
BseLI	CCNNNNNNNGG	3 cut(s)	621, 716, 947
BseMI	GCAATG	1 cut(s)	655
BseMII	CTCAG	4 cut(s)	20, 831, 867, 876
BseNI	ACTGG	2 cut(s)	437, 640
BseSI	GKGCMC	2 cut(s)	359, 710
BseXI	GCAGC	5 cut(s)	169, 186, 267, 382, 673
BsgI	GTGCAG	1 cut(s)	672
BshFI	GGCC	2 cut(s)	427, 807
BshNI	GGYRCC	1 cut(s)	705
BshVI	ATCGAT	1 cut(s)	324
BsiHKCI	CYCGRG	1 cut(s)	306
BslFI	GGGAC	2 cut(s)	35, 272
BslI	CCNNNNNNNGG	3 cut(s)	621, 716, 947
BsmAI	GTCTC	2 cut(s)	396, 717
BsmFI	GGGAC	2 cut(s)	35, 272
BsmI	GAATGC	1 cut(s)	1009
BsnI	GGCC	2 cut(s)	427, 807
Bso31I	GGTCTC	1 cut(s)	717
BsoBI	CYCGRG	1 cut(s)	306
Bsp119I	TTCGAA	1 cut(s)	315
Bsp1286I	GDGCHC	2 cut(s)	359, 710
Bsp1407I	TGTACA	1 cut(s)	220
Bsp143I	GATC	4 cut(s)	565, 713, 963, 984
Bsp1720I	GCTNAGC	1 cut(s)	655
Bsp19I	CCATGG	1 cut(s)	915
BspANI	GGCC	2 cut(s)	427, 807
BspCNI	CTCAG	4 cut(s)	19, 830, 868, 877
BspDI	ATCGAT	1 cut(s)	324
BspLI	GGNNCC	4 cut(s)	426, 441, 484, 707
BspT104I	TTCGAA	1 cut(s)	315
BspT107I	GGYRCC	1 cut(s)	705
BspTNI	GGTCTC	1 cut(s)	717
BsrDI	GCAATG	1 cut(s)	655
BsrGI	TGTACA	1 cut(s)	220
BsrI	ACTGG	2 cut(s)	437, 640
BssECI	CCNNGG	3 cut(s)	153, 801, 915
BssMI	GATC	4 cut(s)	565, 713, 963, 984
BssT1I	CCWWGG	3 cut(s)	153, 801, 915
Bst2UI	CCWGG	1 cut(s)	703
Bst4CI	ACNGT	5 cut(s)	99, 412, 526, 693, 870
Bst6I	CTCTTC	4 cut(s)	42, 272, 448, 833
BstAUI	TGTACA	1 cut(s)	220
BstBI	TTCGAA	1 cut(s)	315
BstC8I	GCNNGC	1 cut(s)	175
BstDEI	CTNAG	6 cut(s)	6, 194, 655, 817, 876, 885
BstDSI	CCRYGG	1 cut(s)	915
BstENI	CCTNNNNNAGG	1 cut(s)	619
BstF5I	GGATG	1 cut(s)	495
BstKTI	GATC	4 cut(s)	568, 716, 966, 987
BstMAI	GTCTC	2 cut(s)	396, 717
BstMBI	GATC	4 cut(s)	565, 713, 963, 984
BstMWI	GCNNNNNNNGC	4 cut(s)	170, 179, 199, 395
BstNI	CCWGG	1 cut(s)	703
BstSCI	CCNGG	1 cut(s)	701
BstSLI	GKGCMC	2 cut(s)	359, 710
BstV1I	GCAGC	5 cut(s)	169, 186, 267, 382, 673
BstX2I	RGATCY	1 cut(s)	713
BstXI	CCANNNNNNTGG	2 cut(s)	596, 916
BstYI	RGATCY	1 cut(s)	713
Bsu15I	ATCGAT	1 cut(s)	324
BsuRI	GGCC	2 cut(s)	427, 807
BsuTUI	ATCGAT	1 cut(s)	324
BtgI	CCRYGG	1 cut(s)	915
BtsCI	GGATG	1 cut(s)	495
BtsIMutI	CAGTG	2 cut(s)	408, 882
Cac8I	GCNNGC	1 cut(s)	175
Cfr13I	GGNCC	2 cut(s)	425, 805
ClaI	ATCGAT	1 cut(s)	324
CsiI	ACCWGGT	1 cut(s)	701
Csp6I	GTAC	1 cut(s)	221
CviAII	CATG	4 cut(s)	178, 209, 916, 1008
CviQI	GTAC	1 cut(s)	221
DdeI	CTNAG	6 cut(s)	6, 194, 655, 817, 876, 885
DpnI	GATC	4 cut(s)	567, 715, 965, 986
DpnII	GATC	4 cut(s)	565, 713, 963, 984
Eam1104I	CTCTTC	4 cut(s)	42, 272, 448, 833
EarI	CTCTTC	4 cut(s)	42, 272, 448, 833
Eco130I	CCWWGG	3 cut(s)	153, 801, 915
Eco31I	GGTCTC	1 cut(s)	717
Eco88I	CYCGRG	1 cut(s)	306
EcoNI	CCTNNNNNAGG	1 cut(s)	619
EcoO109I	RGGNCCY	1 cut(s)	805
EcoRI	GAATTC	1 cut(s)	298
EcoRII	CCWGG	1 cut(s)	701
EcoT14I	CCWWGG	3 cut(s)	153, 801, 915
EcoT22I	ATGCAT	2 cut(s)	238, 1009
ErhI	CCWWGG	3 cut(s)	153, 801, 915
FaeI	CATG	4 cut(s)	181, 212, 919, 1011
FaiI	YATR	9 cut(s)	105, 179, 210, 266, 682, 684, 873, 917, 1009
FaqI	GGGAC	2 cut(s)	35, 272
FatI	CATG	4 cut(s)	177, 208, 915, 1007
FauNDI	CATATG	1 cut(s)	682
Fnu4HI	GCNGC	5 cut(s)	183, 200, 256, 396, 687
FokI	GGATG	1 cut(s)	482
Fsp4HI	GCNGC	5 cut(s)	183, 200, 256, 396, 687
FspBI	CTAG	4 cut(s)	26, 120, 399, 446
GluI	GCNGC	5 cut(s)	183, 200, 256, 396, 687
HaeIII	GGCC	2 cut(s)	427, 807
Hin1II	CATG	4 cut(s)	181, 212, 919, 1011
HinfI	GANTC	2 cut(s)	404, 458
HphI	GGTGA	3 cut(s)	523, 658, 931
Hpy188I	TCNGA	3 cut(s)	820, 968, 1002
Hpy188III	TCNNGA	5 cut(s)	541, 582, 784, 811, 835
HpyAV	CCTTC	1 cut(s)	32
HpyCH4III	ACNGT	5 cut(s)	99, 412, 526, 693, 870
HpyCH4V	TGCA	8 cut(s)	164, 202, 236, 341, 612, 689, 978, 1007
HpyF10VI	GCNNNNNNNGC	4 cut(s)	170, 179, 199, 395
HpyF3I	CTNAG	6 cut(s)	6, 194, 655, 817, 876, 885
Hsp92II	CATG	4 cut(s)	181, 212, 919, 1011
Kzo9I	GATC	4 cut(s)	565, 713, 963, 984
LmnI	GCTCC	3 cut(s)	467, 488, 508
Lsp1109I	GCAGC	5 cut(s)	169, 186, 267, 382, 673
LweI	GCATC	4 cut(s)	223, 245, 599, 965
MabI	ACCWGGT	1 cut(s)	701
MaeI	CTAG	4 cut(s)	26, 120, 399, 446
MaeIII	GTNAC	1 cut(s)	847
MalI	GATC	4 cut(s)	567, 715, 965, 986
MboI	GATC	4 cut(s)	565, 713, 963, 984
MboII	GAAGA	6 cut(s)	29, 289, 465, 850, 934, 994
MfeI	CAATTG	1 cut(s)	857
MflI	RGATCY	1 cut(s)	713
MhlI	GDGCHC	2 cut(s)	359, 710
MluCI	AATT	4 cut(s)	240, 298, 825, 857
MlyI	GAGTC	1 cut(s)	398
MmeI	TCCRAC	2 cut(s)	228, 510
MnlI	CCTC	8 cut(s)	196, 273, 302, 430, 537, 621, 625, 818
Mph1103I	ATGCAT	2 cut(s)	238, 1009
MroXI	GAANNNNTTC	2 cut(s)	457, 934
MseI	TTAA	1 cut(s)	476
MslI	CAYNNNNRTG	1 cut(s)	207
MspR9I	CCNGG	1 cut(s)	703
MunI	CAATTG	1 cut(s)	857
Mva1269I	GAATGC	1 cut(s)	1009
MvaI	CCWGG	1 cut(s)	703
MwoI	GCNNNNNNNGC	4 cut(s)	170, 179, 199, 395
NcoI	CCATGG	1 cut(s)	915
NdeI	CATATG	1 cut(s)	682
NdeII	GATC	4 cut(s)	565, 713, 963, 984
NlaIII	CATG	4 cut(s)	181, 212, 919, 1011
NlaIV	GGNNCC	4 cut(s)	426, 441, 484, 707
NmuCI	GTSAC	1 cut(s)	847
NsiI	ATGCAT	2 cut(s)	238, 1009
NspV	TTCGAA	1 cut(s)	315
PaeR7I	CTCGAG	1 cut(s)	306
PcsI	WCGNNNNNNNCGW	1 cut(s)	321
PctI	GAATGC	1 cut(s)	1009
PdmI	GAANNNNTTC	2 cut(s)	457, 934
PfeI	GAWTC	1 cut(s)	458
PflFI	GACNNNGTC	1 cut(s)	749
PflMI	CCANNNNNTGG	1 cut(s)	716
PkrI	GCNGC	5 cut(s)	184, 201, 257, 397, 688
PleI	GAGTC	1 cut(s)	398
PpsI	GAGTC	1 cut(s)	398
Psp6I	CCWGG	1 cut(s)	701
PspGI	CCWGG	1 cut(s)	701
PspN4I	GGNNCC	4 cut(s)	426, 441, 484, 707
PspPI	GGNCC	2 cut(s)	425, 805
PspXI	VCTCGAGB	1 cut(s)	306
PsuI	RGATCY	1 cut(s)	713
PsyI	GACNNNGTC	1 cut(s)	749
RsaI	GTAC	1 cut(s)	222
RsaNI	GTAC	1 cut(s)	221
RseI	CAYNNNNRTG	1 cut(s)	207
SaqAI	TTAA	1 cut(s)	476
SatI	GCNGC	5 cut(s)	183, 200, 256, 396, 687
Sau3AI	GATC	4 cut(s)	565, 713, 963, 984
Sau96I	GGNCC	2 cut(s)	425, 805
SchI	GAGTC	1 cut(s)	398
ScrFI	CCNGG	1 cut(s)	703
SduI	GDGCHC	2 cut(s)	359, 710
SexAI	ACCWGGT	1 cut(s)	701
SfaNI	GCATC	4 cut(s)	223, 245, 599, 965
Sfr274I	CTCGAG	1 cut(s)	306
SfuI	TTCGAA	1 cut(s)	315
SlaI	CTCGAG	1 cut(s)	306
SmiMI	CAYNNNNRTG	1 cut(s)	207
SmlI	CTYRAG	1 cut(s)	306
SmoI	CTYRAG	1 cut(s)	306
Sse9I	AATT	4 cut(s)	240, 298, 825, 857
SspI	AATATT	1 cut(s)	934
SspMI	CTAG	4 cut(s)	26, 120, 399, 446
StyD4I	CCNGG	1 cut(s)	701
StyI	CCWWGG	3 cut(s)	153, 801, 915
TaaI	ACNGT	5 cut(s)	99, 412, 526, 693, 870
TaqI	TCGA	3 cut(s)	307, 315, 324
TasI	AATT	4 cut(s)	240, 298, 825, 857
TatI	WGTACW	1 cut(s)	220
TfiI	GAWTC	1 cut(s)	458
Tru1I	TTAA	1 cut(s)	476
Tru9I	TTAA	1 cut(s)	476
TscAI	CASTG	2 cut(s)	415, 889
TseFI	GTSAC	1 cut(s)	847
TseI	GCWGC	5 cut(s)	182, 199, 255, 395, 686
Tsp45I	GTSAC	1 cut(s)	847
TspDTI	ATGAA	2 cut(s)	342, 837
TspGWI	ACGGA	1 cut(s)	287
TspRI	CASTG	2 cut(s)	415, 889
Tth111I	GACNNNGTC	1 cut(s)	749
Van91I	CCANNNNNTGG	1 cut(s)	716
XagI	CCTNNNNNAGG	1 cut(s)	619
XapI	RAATTY	2 cut(s)	298, 825
XcmI	CCANNNNNNNNNTGG	2 cut(s)	647, 922
XhoI	CTCGAG	1 cut(s)	306
XmnI	GAANNNNTTC	2 cut(s)	457, 934
XspI	CTAG	4 cut(s)	26, 120, 399, 446
Zsp2I	ATGCAT	2 cut(s)	238, 1009

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.