AT2G18900

WD repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0009414
Physical Location & Seq
Reverse (-)
8188237 .. 8192536
4300 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G18900.1

Sequence Viewer

Length: 2415 bp
ATGAAACGCGGCGGAAGAAGCTACGTAACTTCACCTCCATCATTCTCCAACGACGCTAAAAAGCTTCTCGTCTGCACAGGAAACACTGTCTCTGTTTTCAGCGCCGCCACTGGCTTACAGATTACTTCGCTTGAAGGTCATACAGCTCCAGTAACAACTCTAATTGTTGTTCCTGCATCAAGTCCTGCTCAAAAAATCCTTTGTTATTGTTGGACTGCTTCTCTTGATGGTACTATTCGTCATTGGGATTTCTCTGGACCTGAGCTATTGAAAACTATTGATGCTCAGCTTCCGATTTACTCTATGGTTATACCATCTCTTTTGAGCGAACCTCAACAAATTGATAAACGTCGTGAGTTGTCTGGTAAGTTGGTTGCTTATGTTTCCGTTGAGGATATAAGTGTGGTTAACCAAGGGTCTAAAGAGTTGCGTGGACATATCCGAAGATTTAACCTCGCTAAGTCGCGTATTCCTCGTGGAGATACTTTAAAAGAGACGGCAGAACCAGAATCTATTGTTATTAGTCCCTCGGGAGAATTTTTCGGAATCCGTCACAAGTGTAAAATTCATATATGGGATGTTCCTTCTGGAGGATCAAGGCATGCGGTTTCAAGGAAGATGACATTACATCACACAAAGGTTATCAATGCTTTTGCTTTTCATCCCACGGAGAGAGTTATAGCTGCTGGAGATGTAACTGGAAGAGTGTTGATTTGGAGAGGATTTGGTAATAGAAAACTTGCCTTGGGTAATCAAAAGAAAAAAGTGAGAGCCATGGTTGATTTGGACAATGCTGGAGTGAGAGGTGAAGATGATGCTGAATCTTGCACTACATGGCACTGGCATTCTGCTGAAGTTAATGTCCTTAATTTCTCTTCCGATGGAGCATATTTGTATTCAGGGGGAAGGGAAGGGGTACTTGTCGTTTGGCAGCTAGACACAGGGAAAAAGAAATTCTTACCAAGGATAGGATCCCCCTTGCTGTATTTCATGTGGTCTCCAGATCCAACTCTTTCTTCTGTGGTTTGTGCAGATAATCAGATCCATTTGCTTAAAATGCCTTCCATGGAGATCTTAAGGACCATTTCTGGAATCAAGCCTCCCCCATCATTGCCTAGGATGTATGAAGGCTTGGCTAGTACTGTTGCCTTTGATCGATCTTCTGGCATAGCTGCTTTGTGCACAGAGAATTATTGTGTACAGCTATATAATCTTCTCAATGACCGGGGAATTTCAGAGATTCAAGTTTGTGAGAGAAACCATCAACCAGGAGATGAGATCACAGTTGTGGTGACAGCGGTTGCTCTCTCCCTGGATGGCTCAGTGATGAGTACAACCGAGGTGAAACTTCCGGAAGATGGAATAGGAGGCTTAGTGTCCCTCAAGTTTTGGGCGTCTGAACCAGACAGCAAAACTTTCACCTTATCCACAATCGTATATGAACCTCATAGGGATGCCGGTGTCTCAGCCATTGTGTTCCACCCTACCCGCTCCATGGCAGTGAGTACATCATTCGGTGGTGACTTCAAGATTTGGGTATGCAACAGTGACAAGAACCAGACGGATAAAGACTCTAGCTGGATATGTCACGCTGTTGGCTCTTATAAGAAGAAACCAATGACTGCTGCTGCTTTCTCTGGGGATGGCACTGTTATGGCTGTTGCGGCTGAGAATGTTATTACACTGTGGAATCCAGATAAGAACATTCTCTTGTCTGTTCTAGGATCGACACTCACGCCTATCACGAAGCTCTGTTTCGCTGGAAAGTCTGAGTTCCTTGTTGCTGCATCCCATATTCCAAGACCTGAACTATCTGTTTGGAATACATCAAAGTTATCTTTATCATGGTCATATGGGTTACGCATAGAAGCTGTCACCTCTGCAGTGGATTCGTCAGCATTTGCAGTCTTGGCTGTGATCCCAAAAACTTTTAAAACAGATGAATCTAAGGAGAACATCTTCCGTGGTAGAGATGGTGCCATTCTTTTGTTTAACGGATCAGATCCCAAGCCGGTATCTATATGGACTGTGATGAAGGCTAGGGGAGGATCAATCTCATTTTTAGAAGGAGATAAGTCTCAGCTTCGCCTTGCATATGTAAATGGAAGCCATGAATATGTTGTCTTTGATCCCAATAGTGATGAGTCACATGAGCGTAGCGCTGTTGACTACGATGGTCTTGCTGGTCTGGAAGAGACAGGAGACGCCGGGTACACATCCTTATACGGGCAGTTACCTGATTATGACAAGAAGAGAATGGAGGATGTTGAGTCGTTGGGAACACCGTTTGTATCATCAGAAAGACCGTGGGAAACAATATTCAGCGGCTCCACACTAAATTTCCCGCCACTTCAGAAATTATGTGCTGAGTTCTTTGAGTCCCTAATGGAGAAAAGAACGGCCGTTGTGGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03008 map03008
Pfam Domains
Protein Families
WD40

Protein Analysis

804

Amino Acids

88.01

Weight (kDa)

6.57

Isoelectric Point (pI)

37.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_WDR75_1st PF23869 15 - 104 2.4e-12 WD repeat-containing protein 75 first beta-propeller
WD40_WDHD1_1st PF24817 15 - 236 1.5e-09 WDHD1 first WD40 domain
Beta-prop_EML_2 PF23414 184 - 361 7.6e-07 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_CAF1B_HIR1 PF24105 187 - 363 5.9e-07 CAF1B/HIR1 beta-propeller domain
Beta-prop_IFT140_1st PF23383 270 - 314 2.2e-06 IFT140 first beta-propeller
Beta-prop_THOC3 PF25174 275 - 444 6.6e-07 THOC3 beta-propeller domain
Beta-prop_WDR75_1st PF23869 276 - 346 2e-13 WD repeat-containing protein 75 first beta-propeller
Beta-prop_WDR75_2nd PF23769 400 - 641 2e-34 WD repeat-containing protein 75 second beta-propeller
WD40_Prp19 PF24814 461 - 614 2.4e-07 Prp19 WD40 domain
WD40_WDHD1_1st PF24817 485 - 611 5.7e-06 WDHD1 first WD40 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1605
AccB1I GGYRCC 1 cut(s) 1976
AccBSI CCGCTC 1 cut(s) 1491
AccII CGCG 2 cut(s) 9, 466
AccIII TCCGGA 1 cut(s) 1351
AciI CCGC 9 cut(s) 9, 12, 105, 605, 1298, 1489, 1664, 2325, 2345
AcoI YGGCCR 1 cut(s) 2400
AcsI RAATTY 5 cut(s) 536, 564, 953, 1230, 2338
AcuI CTGAAG 2 cut(s) 873, 2336
AcyI GRCGYC 2 cut(s) 1394, 2205
AfaI GTAC 7 cut(s) 232, 918, 1141, 1200, 1333, 1507, 2213
AfeI AGCGCT 1 cut(s) 2161
AfiI CCNNNNNNNGG 5 cut(s) 590, 968, 1358, 1495, 2226
AflII CTTAAG 1 cut(s) 1075
AgsI TTSAA 5 cut(s) 134, 271, 612, 1244, 1528
AjnI CCWGG 2 cut(s) 1267, 1311
AjuI GAANNNNNNNTTGG 2 cut(s) 1000, 1032
AleI CACNNNNGTG 1 cut(s) 1286
Alw21I GWGCWC 1 cut(s) 1184
Alw26I GTCTC 7 cut(s) 94, 488, 1002, 1468, 2082, 2189, 2196
Alw44I GTGCAC 1 cut(s) 1180
Ama87I CYCGRG 1 cut(s) 529
Aor13HI TCCGGA 1 cut(s) 1351
Aor51HI AGCGCT 1 cut(s) 2161
AoxI GGCC 1 cut(s) 2400
ApaLI GTGCAC 1 cut(s) 1180
ApeKI GCWGC 6 cut(s) 683, 931, 1172, 1625, 1628, 1784
ApoI RAATTY 5 cut(s) 536, 564, 953, 1230, 2338
Asp700I GAANNNNTTC 1 cut(s) 1958
AspA2I CCTAGG 1 cut(s) 1115
AspLEI GCGC 2 cut(s) 104, 2162
AspS9I GGNCC 2 cut(s) 257, 1080
AsuC2I CCSGG 2 cut(s) 1226, 2209
AsuHPI GGTGA 7 cut(s) 24, 818, 1303, 1354, 1411, 1532, 1867
AvaI CYCGRG 1 cut(s) 529
AvaII GGWCC 2 cut(s) 257, 1080
AvrII CCTAGG 1 cut(s) 1115
BaeGI GKGCMC 1 cut(s) 1184
BamHI GGATCC 1 cut(s) 971
BanI GGYRCC 1 cut(s) 1976
BauI CACGAG 1 cut(s) 474
Bbv12I GWGCWC 1 cut(s) 1184
BbvI GCAGC 6 cut(s) 670, 943, 1159, 1612, 1615, 1771
BceAI ACGGC 2 cut(s) 513, 2387
BcgI CGANNNNNNTGC 4 cut(s) 1872, 1906, 2162, 2196
BciT130I CCWGG 2 cut(s) 1269, 1313
BcnI CCSGG 2 cut(s) 1226, 2209
BcoDI GTCTC 7 cut(s) 94, 488, 1002, 1468, 2082, 2189, 2196
BfaI CTAG 6 cut(s) 935, 1116, 1137, 1575, 1721, 2040
BfmI CTRYAG 1 cut(s) 1881
BfoI RGCGCY 2 cut(s) 105, 2163
BfrI CTTAAG 1 cut(s) 1075
BglII AGATCT 1 cut(s) 1071
BlnI CCTAGG 1 cut(s) 1115
BlpI GCTNAGC 1 cut(s) 285
BmcAI AGTACT 1 cut(s) 1141
Bme1390I CCNGG 4 cut(s) 1226, 1269, 1313, 2209
Bme18I GGWCC 2 cut(s) 257, 1080
BmeT110I CYCGRG 1 cut(s) 529
BmgT120I GGNCC 2 cut(s) 257, 1080
BmiI GGNNCC 3 cut(s) 973, 1978, 2329
BmrFI CCNGG 4 cut(s) 1226, 1269, 1313, 2209
BmsI GCATC 5 cut(s) 185, 271, 805, 1444, 1796
BplI GAGNNNNNCTC 2 cut(s) 316, 348
BpmI CTGGAG 5 cut(s) 132, 609, 708, 816, 984
Bpu10I CCTNAGC 1 cut(s) 261
Bpu1102I GCTNAGC 1 cut(s) 285
BpuEI CTTGAG 1 cut(s) 1367
BpuMI CCSGG 2 cut(s) 1226, 2209
Bsa29I ATCGAT 1 cut(s) 1156
BsaAI YACGTR 1 cut(s) 25
BsaHI GRCGYC 2 cut(s) 1394, 2205
BsaI GGTCTC 1 cut(s) 1002
BsaWI WCCGGW 1 cut(s) 1351
BsaXI ACNNNNNCTCC 4 cut(s) 19, 49, 1359, 1389
Bsc4I CCNNNNNNNGG 5 cut(s) 590, 968, 1358, 1495, 2226
Bse118I RCCGGY 2 cut(s) 1457, 2011
Bse1I ACTGG 4 cut(s) 115, 149, 703, 845
Bse3DI GCAATG 1 cut(s) 1109
BseAI TCCGGA 1 cut(s) 1351
BseBI CCWGG 2 cut(s) 1269, 1313
BseCI ATCGAT 1 cut(s) 1156
BseGI GGATG 9 cut(s) 583, 661, 1125, 1321, 1459, 1648, 1787, 2216, 2269
BseLI CCNNNNNNNGG 5 cut(s) 590, 968, 1358, 1495, 2226
BseMI GCAATG 1 cut(s) 1109
BseMII CTCAG 8 cut(s) 252, 299, 1335, 1479, 1659, 1761, 2093, 2358
BseNI ACTGG 4 cut(s) 115, 149, 703, 845
BseSI GKGCMC 1 cut(s) 1184
BseX3I CGGCCG 1 cut(s) 2400
BseXI GCAGC 6 cut(s) 670, 943, 1159, 1612, 1615, 1771
BsgI GTGCAG 2 cut(s) 58, 1050
Bsh1236I CGCG 2 cut(s) 9, 466
Bsh1285I CGRYCG 1 cut(s) 2403
BshFI GGCC 1 cut(s) 2402
BshNI GGYRCC 1 cut(s) 1976
BshVI ATCGAT 1 cut(s) 1156
BsiEI CGRYCG 1 cut(s) 2403
BsiHKAI GWGCWC 1 cut(s) 1184
BsiHKCI CYCGRG 1 cut(s) 529
BsiSI CCGG 5 cut(s) 1225, 1352, 1458, 2012, 2208
BslFI GGGAC 3 cut(s) 510, 1363, 2365
BslI CCNNNNNNNGG 5 cut(s) 590, 968, 1358, 1495, 2226
BsmAI GTCTC 7 cut(s) 94, 488, 1002, 1468, 2082, 2189, 2196
BsmBI CGTCTC 2 cut(s) 488, 2196
BsmFI GGGAC 3 cut(s) 510, 1363, 2365
BsmI GAATGC 1 cut(s) 844
BsnI GGCC 1 cut(s) 2402
Bso31I GGTCTC 1 cut(s) 1002
BsoBI CYCGRG 1 cut(s) 529
Bsp1286I GDGCHC 1 cut(s) 1184
Bsp13I TCCGGA 1 cut(s) 1351
Bsp1407I TGTACA 1 cut(s) 1198
Bsp1720I GCTNAGC 1 cut(s) 285
Bsp19I CCATGG 3 cut(s) 774, 1065, 1494
BspACI CCGC 9 cut(s) 9, 12, 105, 605, 1298, 1489, 1664, 2325, 2345
BspANI GGCC 1 cut(s) 2402
BspCNI CTCAG 8 cut(s) 253, 298, 1334, 1478, 1660, 1762, 2092, 2359
BspDI ATCGAT 1 cut(s) 1156
BspEI TCCGGA 1 cut(s) 1351
BspFNI CGCG 2 cut(s) 9, 466
BspLI GGNNCC 3 cut(s) 973, 1978, 2329
BspMAI CTGCAG 1 cut(s) 1885
BspT107I GGYRCC 1 cut(s) 1976
BspTI CTTAAG 1 cut(s) 1075
BspTNI GGTCTC 1 cut(s) 1002
BsrBI CCGCTC 1 cut(s) 1491
BsrDI GCAATG 1 cut(s) 1109
BsrFI RCCGGY 2 cut(s) 1457, 2011
BsrGI TGTACA 1 cut(s) 1198
BsrI ACTGG 4 cut(s) 115, 149, 703, 845
BssAI RCCGGY 2 cut(s) 1457, 2011
BssNI GRCGYC 2 cut(s) 1394, 2205
BssSI CACGAG 1 cut(s) 474
BssT1I CCWWGG 7 cut(s) 412, 744, 774, 962, 1065, 1115, 1494
Bst2BI CACGAG 1 cut(s) 474
Bst2UI CCWGG 2 cut(s) 1269, 1313
Bst4CI ACNGT 9 cut(s) 88, 1144, 1285, 1547, 1651, 1686, 2029, 2286, 2307
Bst6I CTCTTC 4 cut(s) 697, 880, 2187, 2246
BstACI GRCGYC 2 cut(s) 1394, 2205
BstAFI CTTAAG 1 cut(s) 1075
BstAUI TGTACA 1 cut(s) 1198
BstBAI YACGTR 1 cut(s) 25
BstC8I GCNNGC 1 cut(s) 603
BstDSI CCRYGG 6 cut(s) 666, 774, 1065, 1494, 1963, 2306
BstENI CCTNNNNNAGG 1 cut(s) 588
BstF5I GGATG 9 cut(s) 583, 661, 1125, 1321, 1459, 1648, 1787, 2216, 2269
BstFNI CGCG 2 cut(s) 9, 466
BstH2I RGCGCY 2 cut(s) 105, 2163
BstHHI GCGC 2 cut(s) 104, 2162
BstMAI GTCTC 7 cut(s) 94, 488, 1002, 1468, 2082, 2189, 2196
BstMCI CGRYCG 1 cut(s) 2403
BstMWI GCNNNNNNNGC 4 cut(s) 18, 1057, 1664, 1910
BstNI CCWGG 2 cut(s) 1269, 1313
BstNSI RCATGY 1 cut(s) 605
BstSCI CCNGG 4 cut(s) 1224, 1267, 1311, 2207
BstSFI CTRYAG 1 cut(s) 1881
BstSLI GKGCMC 1 cut(s) 1184
BstSNI TACGTA 1 cut(s) 25
BstUI CGCG 2 cut(s) 9, 466
BstV1I GCAGC 6 cut(s) 670, 943, 1159, 1612, 1615, 1771
BstX2I RGATCY 5 cut(s) 971, 1003, 1041, 1071, 2002
BstYI RGATCY 5 cut(s) 971, 1003, 1041, 1071, 2002
BstZI CGGCCG 1 cut(s) 2400
Bsu15I ATCGAT 1 cut(s) 1156
BsuRI GGCC 1 cut(s) 2402
BsuTUI ATCGAT 1 cut(s) 1156
BtgI CCRYGG 6 cut(s) 666, 774, 1065, 1494, 1963, 2306
BtsCI GGATG 9 cut(s) 583, 661, 1125, 1321, 1459, 1648, 1787, 2216, 2269
BtsI GCAGTG 2 cut(s) 1506, 1890
BtsIMutI CAGTG 9 cut(s) 84, 108, 838, 1329, 1506, 1552, 1647, 1682, 1890
Cac8I GCNNGC 1 cut(s) 603
CfoI GCGC 2 cut(s) 104, 2162
Cfr10I RCCGGY 2 cut(s) 1457, 2011
Cfr13I GGNCC 2 cut(s) 257, 1080
ClaI ATCGAT 1 cut(s) 1156
CseI GACGC 3 cut(s) 62, 1383, 2213
Csp6I GTAC 7 cut(s) 231, 917, 1140, 1199, 1332, 1506, 2212
CviAII CATG 9 cut(s) 602, 775, 834, 991, 1066, 1495, 1845, 2111, 2150
CviQI GTAC 7 cut(s) 231, 917, 1140, 1199, 1332, 1506, 2212
DraI TTTAAA 2 cut(s) 489, 1933
EaeI YGGCCR 1 cut(s) 2400
EagI CGGCCG 1 cut(s) 2400
Eam1104I CTCTTC 4 cut(s) 697, 880, 2187, 2246
EarI CTCTTC 4 cut(s) 697, 880, 2187, 2246
EciI GGCGGA 1 cut(s) 27
EclXI CGGCCG 1 cut(s) 2400
Eco105I TACGTA 1 cut(s) 25
Eco130I CCWWGG 7 cut(s) 412, 744, 774, 962, 1065, 1115, 1494
Eco31I GGTCTC 1 cut(s) 1002
Eco47I GGWCC 2 cut(s) 257, 1080
Eco47III AGCGCT 1 cut(s) 2161
Eco52I CGGCCG 1 cut(s) 2400
Eco57I CTGAAG 2 cut(s) 873, 2336
Eco88I CYCGRG 1 cut(s) 529
EcoNI CCTNNNNNAGG 1 cut(s) 588
EcoRII CCWGG 2 cut(s) 1267, 1311
EcoT14I CCWWGG 7 cut(s) 412, 744, 774, 962, 1065, 1115, 1494
ErhI CCWWGG 7 cut(s) 412, 744, 774, 962, 1065, 1115, 1494
Esp3I CGTCTC 2 cut(s) 488, 2196
FaeI CATG 9 cut(s) 605, 778, 837, 994, 1069, 1498, 1848, 2114, 2153
FalI AAGNNNNNCTT 4 cut(s) 903, 935, 941, 973
FaqI GGGAC 3 cut(s) 510, 1363, 2365
FatI CATG 9 cut(s) 601, 774, 833, 990, 1065, 1494, 1844, 2110, 2149
FauI CCCGC 2 cut(s) 1496, 2352
FauNDI CATATG 2 cut(s) 1852, 2095
FokI GGATG 9 cut(s) 590, 648, 1132, 1328, 1466, 1655, 1774, 2203, 2276
FspBI CTAG 6 cut(s) 935, 1116, 1137, 1575, 1721, 2040
GlaI GCGC 2 cut(s) 103, 2161
GsuI CTGGAG 5 cut(s) 132, 609, 708, 816, 984
HaeII RGCGCY 2 cut(s) 105, 2163
HaeIII GGCC 1 cut(s) 2402
HapII CCGG 5 cut(s) 1225, 1352, 1458, 2012, 2208
HgaI GACGC 3 cut(s) 62, 1383, 2213
HhaI GCGC 2 cut(s) 104, 2162
Hin1I GRCGYC 2 cut(s) 1394, 2205
Hin1II CATG 9 cut(s) 605, 778, 837, 994, 1069, 1498, 1848, 2114, 2153
Hin6I GCGC 2 cut(s) 102, 2160
HinP1I GCGC 2 cut(s) 102, 2160
HincII GTYRAC 2 cut(s) 409, 2167
HindII GTYRAC 2 cut(s) 409, 2167
HindIII AAGCTT 1 cut(s) 62
HpaI GTTAAC 1 cut(s) 409
HpaII CCGG 5 cut(s) 1225, 1352, 1458, 2012, 2208
HphI GGTGA 7 cut(s) 24, 818, 1303, 1354, 1411, 1532, 1867
Hpy166II GTNNAC 6 cut(s) 409, 434, 1182, 1199, 2167, 2214
Hpy8I GTNNAC 6 cut(s) 409, 434, 1182, 1199, 2167, 2214
Hpy99I CGWCG 2 cut(s) 56, 354
HpyAV CCTTC 8 cut(s) 128, 594, 900, 905, 1071, 1121, 2029, 2060
HpyCH4III ACNGT 9 cut(s) 88, 1144, 1285, 1547, 1651, 1686, 2029, 2286, 2307
HpyCH4IV ACGT 2 cut(s) 24, 349
HpyF10VI GCNNNNNNNGC 4 cut(s) 18, 1057, 1664, 1910
HpySE526I ACGT 2 cut(s) 24, 349
Hsp92I GRCGYC 2 cut(s) 1394, 2205
Hsp92II CATG 9 cut(s) 605, 778, 837, 994, 1069, 1498, 1848, 2114, 2153
HspAI GCGC 2 cut(s) 102, 2160
Kpn2I TCCGGA 1 cut(s) 1351
KspAI GTTAAC 1 cut(s) 409
LmnI GCTCC 4 cut(s) 151, 884, 1496, 2333
Lsp1109I GCAGC 6 cut(s) 670, 943, 1159, 1612, 1615, 1771
LweI GCATC 5 cut(s) 185, 271, 805, 1444, 1796
MaeI CTAG 6 cut(s) 935, 1116, 1137, 1575, 1721, 2040
MaeII ACGT 2 cut(s) 24, 349
MbiI CCGCTC 1 cut(s) 1491
MflI RGATCY 5 cut(s) 971, 1003, 1041, 1071, 2002
MhlI GDGCHC 1 cut(s) 1184
MlyI GAGTC 4 cut(s) 1565, 2153, 2279, 2387
MmeI TCCRAC 3 cut(s) 72, 191, 1031
MroI TCCGGA 1 cut(s) 1351
MroXI GAANNNNTTC 1 cut(s) 1958
MseI TTAA 9 cut(s) 408, 450, 488, 858, 867, 1053, 1076, 1932, 1992
MslI CAYNNNNRTG 5 cut(s) 1286, 1452, 1499, 1652, 2115
MspA1I CMGCKG 2 cut(s) 1298, 2325
MspCI CTTAAG 1 cut(s) 1075
MspI CCGG 5 cut(s) 1225, 1352, 1458, 2012, 2208
MspR9I CCNGG 4 cut(s) 1226, 1269, 1313, 2209
Mva1269I GAATGC 1 cut(s) 844
MvaI CCWGG 2 cut(s) 1269, 1313
MvnI CGCG 2 cut(s) 9, 466
MwoI GCNNNNNNNGC 4 cut(s) 18, 1057, 1664, 1910
NciI CCSGG 2 cut(s) 1226, 2209
NcoI CCATGG 3 cut(s) 774, 1065, 1494
NdeI CATATG 2 cut(s) 1852, 2095
NlaIII CATG 9 cut(s) 605, 778, 837, 994, 1069, 1498, 1848, 2114, 2153
NlaIV GGNNCC 3 cut(s) 973, 1978, 2329
NmuCI GTSAC 7 cut(s) 551, 1291, 1520, 1547, 1586, 1873, 2145
NspI RCATGY 1 cut(s) 605
OliI CACNNNNGTG 1 cut(s) 1286
PaeI GCATGC 1 cut(s) 605
PcsI WCGNNNNNNNCGW 1 cut(s) 1742
PctI GAATGC 1 cut(s) 844
PdmI GAANNNNTTC 1 cut(s) 1958
PfeI GAWTC 8 cut(s) 509, 546, 821, 1092, 1240, 1690, 1889, 1943
PleI GAGTC 4 cut(s) 1565, 2152, 2278, 2386
PpsI GAGTC 4 cut(s) 1565, 2152, 2278, 2386
Ppu21I YACGTR 1 cut(s) 25
PsiI TTATAA 1 cut(s) 1605
Psp6I CCWGG 2 cut(s) 1267, 1311
PspGI CCWGG 2 cut(s) 1267, 1311
PspN4I GGNNCC 3 cut(s) 973, 1978, 2329
PspPI GGNCC 2 cut(s) 257, 1080
PstI CTGCAG 1 cut(s) 1885
PsuI RGATCY 5 cut(s) 971, 1003, 1041, 1071, 2002
RsaI GTAC 7 cut(s) 232, 918, 1141, 1200, 1333, 1507, 2213
RsaNI GTAC 7 cut(s) 231, 917, 1140, 1199, 1332, 1506, 2212
RseI CAYNNNNRTG 5 cut(s) 1286, 1452, 1499, 1652, 2115
SaqAI TTAA 9 cut(s) 408, 450, 488, 858, 867, 1053, 1076, 1932, 1992
Sau96I GGNCC 2 cut(s) 257, 1080
ScaI AGTACT 1 cut(s) 1141
SchI GAGTC 4 cut(s) 1565, 2153, 2279, 2387
ScrFI CCNGG 4 cut(s) 1226, 1269, 1313, 2209
SduI GDGCHC 1 cut(s) 1184
SfaNI GCATC 5 cut(s) 185, 271, 805, 1444, 1796
SfcI CTRYAG 1 cut(s) 1881
SinI GGWCC 2 cut(s) 257, 1080
SmiMI CAYNNNNRTG 5 cut(s) 1286, 1452, 1499, 1652, 2115
SmlI CTYRAG 2 cut(s) 1075, 1382
SmoI CTYRAG 2 cut(s) 1075, 1382
SnaBI TACGTA 1 cut(s) 25
SphI GCATGC 1 cut(s) 605
SsiI CCGC 9 cut(s) 9, 12, 105, 605, 1298, 1489, 1664, 2325, 2345
SspI AATATT 1 cut(s) 2319
SspMI CTAG 6 cut(s) 935, 1116, 1137, 1575, 1721, 2040
StyD4I CCNGG 4 cut(s) 1224, 1267, 1311, 2207
StyI CCWWGG 7 cut(s) 412, 744, 774, 962, 1065, 1115, 1494
TaaI ACNGT 9 cut(s) 88, 1144, 1285, 1547, 1651, 1686, 2029, 2286, 2307
TaiI ACGT 2 cut(s) 27, 352
TaqI TCGA 2 cut(s) 1156, 1727
TatI WGTACW 4 cut(s) 1139, 1198, 1331, 1505
TauI GCSGC 4 cut(s) 12, 107, 1667, 2328
TfiI GAWTC 8 cut(s) 509, 546, 821, 1092, 1240, 1690, 1889, 1943
Tru1I TTAA 9 cut(s) 408, 450, 488, 858, 867, 1053, 1076, 1932, 1992
Tru9I TTAA 9 cut(s) 408, 450, 488, 858, 867, 1053, 1076, 1932, 1992
TscAI CASTG 9 cut(s) 91, 115, 845, 1329, 1506, 1552, 1654, 1689, 1890
TseFI GTSAC 7 cut(s) 551, 1291, 1520, 1547, 1586, 1873, 2145
TseI GCWGC 6 cut(s) 683, 931, 1172, 1625, 1628, 1784
Tsp45I GTSAC 7 cut(s) 551, 1291, 1520, 1547, 1586, 1873, 2145
TspDTI ATGAA 9 cut(s) 17, 557, 650, 979, 1140, 1455, 1956, 2048, 2127
TspGWI ACGGA 6 cut(s) 376, 539, 683, 1577, 1952, 2010
TspRI CASTG 9 cut(s) 91, 115, 845, 1329, 1506, 1552, 1654, 1689, 1890
Vha464I CTTAAG 1 cut(s) 1075
VneI GTGCAC 1 cut(s) 1180
VpaK11BI GGWCC 2 cut(s) 257, 1080
XagI CCTNNNNNAGG 1 cut(s) 588
XapI RAATTY 5 cut(s) 536, 564, 953, 1230, 2338
XceI RCATGY 1 cut(s) 605
XcmI CCANNNNNNNNNTGG 1 cut(s) 781
XmaJI CCTAGG 1 cut(s) 1115
XmnI GAANNNNTTC 1 cut(s) 1958
XspI CTAG 6 cut(s) 935, 1116, 1137, 1575, 1721, 2040
ZrmI AGTACT 1 cut(s) 1141
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.