Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0009414

Physical Location & Seq

Genomic Coordinates Reverse (-)

20272453 .. 20280814

Gene Structure 8362 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g22620.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2523 bp

ATGCTCGAAGTCGAGGGCTCTTGTATTTCCTTCTGGTTTTTGATTTTTCAGCAGCCACCGCTCTTAAACCCCCAAAACCTTCCAGCGGCCACGAAAGCGGTTGCTCCGCCGTTGCTGAGAGAGACAGAGATGATTAGGGGCGGCAAGAGCTACGTGTCAGCACATCCTGCCTTCTCCGCCGATGCCAAGCGCCTCCTCGTCTGCACAGGCACCGCCGTCTCCATCTTTAGCACCTCCACCGGTTTGCAGATATCGTCCTTGGAGGGTCACAATGGCTTGGTCACCTCCGTCATAGTAGTTCCGGGCAACAAGGCTCTGAGCTTCTGCTGGACCGCCTCCGTCGACGGCACCATTCGCTATTGGGACTTTGCTGTTCCTGAGTTGATGAAGACCATTGATATCAAAATGCCCATTTTCTCTATGGTTATTCCGTCCATAATGGGCCAACCCGGGAAAGGAACACGAGAGGATGATTCTAATGCAGCTCATGTTTTTGCTTATTTGTCTGTTGAAAATACCCAAGTGCAACAAAACACACCAAAGCCGTTGCGTGGACGGATTCGGAAGTGTAATTTGACTGAATCTCGTTTGGCTGGCGGTGCTCTCTCTGAGACTCGAAAACCAGAGGCTATAACTATCAGTCCCTCAGGAAAATTCTTTGGCATCCGGAACAAACGGAAGCTTCATATATGGAGAGTCCCTGCTATAGACTCGAAACTCATGATTGCTAAGAAGATTACTCTGCATCATACAAGAAACTTTAACGTTCTTGCATTTCATCCAACTCAGGCAATTGTTGCCGCAGGTGATACAAGTGGGAGAATTCTAATCTGGACAGGATTCGGTAAAGGTACATTTTCCGATGGTGATAAATTGATGAAAGGAAGATCAATGAATAATGAGGAAGAAAGAGATGGAGTTAGGGGAGATGACGATGCTGATGCTTCCTCCACCTGGCATTGGCATGCGGCCGGAATAAGTGTACTTTCTTTCTCTTCTGACGGTGCCTATTTATATTCAGGTGGAATGGAAGGAGTTCTTGTGGTCTGGCAGCTAGACACAGGGAAAAAGAAGTTCTTGCCCAGAATTGGATCTCCTCTTCTATATTTGACTGATTCTCCCGACCCTTCACTTTCTTCTATATCTTGTGCAGATAATCAAATTCATATACTAAAGATGCCCTCCATGGAAATCGTGAAGTCTATTTCAGGGATCAAGCTTCCTTATTCATGTCCAGAGATATATGATGGAATATGCAGCAAGTTTGCCTTTGATCACACTGATGGGTTGGTTGCCTTGCGTACCGTGAATTATCGCATCCAATTCTACAGCTTGTTTGATGACCGTGAAATGTCTGAGGTTCAAATATGTGAAAGAAACCATCAACCAGGGGATGAAGTCAGAGTAACAGTGACTTTGGTGTCTTTATCTAAAGATGGGTCTATGATGTGCACTGTTGAAGTTAAGCTTCCCGAGGAGGGGTTAGGTAGTCTTGTTTGTCTTAAATTTTGGGCATCAGGGCCACAGAACAAAAATTTCAGCCTGTCCACTGTTGTTTATGAACCTCACAGGGATGCTAGAATTTCTTCCCTTGCGTTCCATCCTACTCGTCAAATGGTTGCTAGCTCATCATATGGTGGGGATTTCAAGATTTGGGTTTGCAGTGATGAGATTCAGCAGAAGCATGAGGCGCTGCAACATTCTGGGTGGATGTGTCATGCAATAGGTTCATACAAGAATAAGCCAATGACAGCTGCTGCATTTTCTGGCGATGGTTCTGTTCTGGCGGTTGCAGCTGAAAACGTAATCACTCTATGGGACCCTGACAACAATGCACTTGTAGCTGTCATTGGAGAGATGCAGATGCCAATTGCGACCCTATCTTTTGCTGGGAAATCAGAGTATCTCGTGTCTGTCACTAAAGGTTCAAAACCGCAACTATCGGTGTGGAGCATGTCAGAACTATCTGAATCTTGGTCATATAAGCTACACGTAGAAGCTGTTACCTGTGCGGTAGATTCGTCATCATTTGCAGTTCTATCTTTACTAGGAAAAGATGGGGTAATCTTATTATTCAATGCAACAGATCCTGTTCCATTGGCTATGTGGTCTGTAAGGAAGGCTCAGGGAGGCGGGCTTGCTTTTCTCAACAGCGACCAACTTTCTAACCAACAAAATATTTTAGATAGGAACCGTCCACAAGCTTTGCTTGTCTATATAAATGGTGACCATGAATACGTCATCTTTGACCCATATAACATTGAAGCAAAAGAACTTAGTCTAACCAGGCCGGGGAGTCGTGTTGCCCCTGATGAAACAGGGCAATTTGGATATTCATCTATCTACGGGGAGCTACCGAAGTTTGATATAAAGAGAGACCAGACCGTGGCCCCATCTGCTCCATCACAGAGGCCTTGGGAGACCATATTTAGTGGGTCATCTCATGAACTTCCACCCCTAACCAAACTGTGTTCAGATTTTATGGAATCACTGCTAGAAAGGAGGACTGCAATGGTAGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

WD40

Protein Analysis

841

Amino Acids

92.23

Weight (kDa)

6.31

Isoelectric Point (pI)

38.09

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009414)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18900
fragaria_vesca	FvH4_4g07920 FvH4_4g07920 FvH4_4g07920 FvH4_4g07920 FvH4_4g07920 FvH4_4g07920 FvH4_4g07920 FvH4_4g07920
malus_domestica	MD13G1251600.v1.1
prunus_persica	Prupe.1G084200_v2.0.a1
pyrus_communis	pycom13g22620
rosa_chinensis	RchiOBHm_Chr4g0401591
rosa_laevigata	RLG00000009142
rosa_multiflora	Rmu_sc0004644.1_g000018
rosa_roxburghii	Rroxscaffold_5G00346170
rosa_rugosa	Rorug04G0030400
rosa_samantha	Rh4AG108000 Rh4BG101900 Rh4CG116300 Rh4DG099200
rosa_wichuraiana	Rw4G008770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	794
AasI	GACNNNNNNGTC	1 cut(s)	1420
Acc36I	ACCTGC	1 cut(s)	794
AccB1I	GGYRCC	3 cut(s)	209, 347, 1004
AccB7I	CCANNNNNTGG	1 cut(s)	2386
AccBSI	CCGCTC	1 cut(s)	61
AccI	GTMKAC	1 cut(s)	342
AccIII	TCCGGA	1 cut(s)	666
AclI	AACGTT	1 cut(s)	765
AclWI	GGATC	3 cut(s)	1099, 1220, 2081
AcoI	YGGCCR	2 cut(s)	87, 969
AcsI	RAATTY	6 cut(s)	653, 822, 1161, 1505, 1534, 1581
AfaI	GTAC	3 cut(s)	853, 984, 1303
AflIII	ACRYGT	2 cut(s)	153, 1990
AgeI	ACCGGT	1 cut(s)	239
AgsI	TTSAA	7 cut(s)	512, 1364, 1460, 1648, 1929, 2077, 2264
AjnI	CCWGG	3 cut(s)	953, 1387, 2285
Alw21I	GWGCWC	2 cut(s)	604, 1454
Alw26I	GTCTC	5 cut(s)	116, 223, 605, 2370, 2414
Alw44I	GTGCAC	1 cut(s)	1450
AlwI	GGATC	3 cut(s)	1099, 1220, 2081
AlwNI	CAGNNNCTG	2 cut(s)	1757, 2090
Ama87I	CYCGRG	2 cut(s)	449, 1472
Aor13HI	TCCGGA	1 cut(s)	666
AoxI	GGCC	7 cut(s)	87, 442, 969, 1520, 2288, 2388, 2411
ApaLI	GTGCAC	1 cut(s)	1450
ApeKI	GCWGC	8 cut(s)	52, 482, 1051, 1257, 1693, 1754, 1757, 1793
ApoI	RAATTY	6 cut(s)	653, 822, 1161, 1505, 1534, 1581
AsiGI	ACCGGT	1 cut(s)	239
Asp700I	GAANNNNTTC	2 cut(s)	1035, 1585
AspLEI	GCGC	2 cut(s)	192, 1693
AspS9I	GGNCC	5 cut(s)	330, 442, 1520, 1819, 2389
AsuC2I	CCSGG	4 cut(s)	303, 450, 451, 2292
AsuHPI	GGTGA	4 cut(s)	274, 818, 878, 2237
AsuNHI	GCTAGC	1 cut(s)	1622
AvaI	CYCGRG	2 cut(s)	449, 1472
AvaII	GGWCC	2 cut(s)	330, 1819
AxyI	CCTNAGG	1 cut(s)	646
BaeGI	GKGCMC	1 cut(s)	1454
BanI	GGYRCC	3 cut(s)	209, 347, 1004
BanII	GRGCYC	1 cut(s)	20
BauI	CACGAG	2 cut(s)	462, 1907
BbsI	GAAGAC	1 cut(s)	395
Bbv12I	GWGCWC	2 cut(s)	604, 1454
BbvI	GCAGC	8 cut(s)	64, 494, 1063, 1269, 1680, 1741, 1744, 1805
BceAI	ACGGC	4 cut(s)	94, 200, 361, 529
BcgI	CGANNNNNNTGC	2 cut(s)	923, 957
BciT130I	CCWGG	3 cut(s)	955, 1389, 2287
BclI	TGATCA	1 cut(s)	1273
BcnI	CCSGG	4 cut(s)	303, 450, 451, 2292
BcoDI	GTCTC	5 cut(s)	116, 223, 605, 2370, 2414
BfaI	CTAG	5 cut(s)	1055, 1578, 1623, 2048, 2495
BfmI	CTRYAG	2 cut(s)	705, 1327
BfoI	RGCGCY	2 cut(s)	193, 1694
BfuAI	ACCTGC	1 cut(s)	794
Bme1390I	CCNGG	7 cut(s)	303, 450, 451, 955, 1389, 2287, 2292
Bme18I	GGWCC	2 cut(s)	330, 1819
BmeT110I	CYCGRG	2 cut(s)	449, 1472
BmgT120I	GGNCC	5 cut(s)	330, 442, 1520, 1819, 2389
BmiI	GGNNCC	7 cut(s)	211, 349, 1006, 1820, 1821, 2192, 2391
BmrFI	CCNGG	7 cut(s)	303, 450, 451, 955, 1389, 2287, 2292
BmtI	GCTAGC	1 cut(s)	1626
BpiI	GAAGAC	1 cut(s)	395
Bpu10I	CCTNAGC	1 cut(s)	2124
BpuMI	CCSGG	4 cut(s)	303, 450, 451, 2292
BsaAI	YACGTR	2 cut(s)	154, 1993
BsaBI	GATNNNNATC	1 cut(s)	2335
BsaI	GGTCTC	2 cut(s)	2370, 2414
BsaJI	CCNNGG	8 cut(s)	258, 449, 1185, 1388, 1473, 2291, 2385, 2414
BsaWI	WCCGGW	2 cut(s)	239, 666
BsaXI	ACNNNNNCTCC	4 cut(s)	1026, 1056, 1102, 1132
Bse118I	RCCGGY	1 cut(s)	239
Bse21I	CCTNAGG	1 cut(s)	646
Bse3DI	GCAATG	1 cut(s)	2517
Bse8I	GATNNNNATC	1 cut(s)	2335
BseAI	TCCGGA	1 cut(s)	666
BseBI	CCWGG	3 cut(s)	955, 1389, 2287
BseDI	CCNNGG	8 cut(s)	258, 449, 1185, 1388, 1473, 2291, 2385, 2414
BseGI	GGATG	9 cut(s)	163, 475, 663, 778, 1317, 1399, 1579, 1600, 1716
BseJI	GATNNNNATC	1 cut(s)	2335
BseMI	GCAATG	1 cut(s)	2517
BseMII	CTCAG	8 cut(s)	107, 308, 369, 600, 660, 800, 1347, 2138
BseRI	GAGGAG	3 cut(s)	185, 1086, 1490
BseSI	GKGCMC	1 cut(s)	1454
BseX3I	CGGCCG	1 cut(s)	969
BseXI	GCAGC	8 cut(s)	64, 494, 1063, 1269, 1680, 1741, 1744, 1805
BseYI	CCCAGC	1 cut(s)	1889
BsgI	GTGCAG	2 cut(s)	187, 1170
Bsh1285I	CGRYCG	1 cut(s)	972
BshFI	GGCC	7 cut(s)	89, 444, 971, 1522, 2290, 2390, 2413
BshNI	GGYRCC	3 cut(s)	209, 347, 1004
BshTI	ACCGGT	1 cut(s)	239
BsiEI	CGRYCG	1 cut(s)	972
BsiHKAI	GWGCWC	2 cut(s)	604, 1454
BsiHKCI	CYCGRG	2 cut(s)	449, 1472
BsiSI	CCGG	6 cut(s)	240, 302, 450, 667, 972, 2291
BslFI	GGGAC	4 cut(s)	377, 627, 683, 1832
BsmAI	GTCTC	5 cut(s)	116, 223, 605, 2370, 2414
BsmBI	CGTCTC	1 cut(s)	223
BsmFI	GGGAC	4 cut(s)	377, 627, 683, 1832
BsnI	GGCC	7 cut(s)	89, 444, 971, 1522, 2290, 2390, 2413
Bso31I	GGTCTC	2 cut(s)	2370, 2414
BsoBI	CYCGRG	2 cut(s)	449, 1472
Bsp1286I	GDGCHC	3 cut(s)	20, 604, 1454
Bsp13I	TCCGGA	1 cut(s)	666
Bsp143I	GATC	5 cut(s)	887, 1091, 1212, 1273, 2086
Bsp19I	CCATGG	1 cut(s)	1185
BspANI	GGCC	7 cut(s)	89, 444, 971, 1522, 2290, 2390, 2413
BspCNI	CTCAG	8 cut(s)	108, 309, 370, 601, 659, 799, 1348, 2137
BspEI	TCCGGA	1 cut(s)	666
BspHI	TCATGA	2 cut(s)	720, 2443
BspLI	GGNNCC	7 cut(s)	211, 349, 1006, 1820, 1821, 2192, 2391
BspMI	ACCTGC	1 cut(s)	794
BspOI	GCTAGC	1 cut(s)	1626
BspPI	GGATC	3 cut(s)	1099, 1220, 2081
BspT107I	GGYRCC	3 cut(s)	209, 347, 1004
BspTNI	GGTCTC	2 cut(s)	2370, 2414
BsrBI	CCGCTC	1 cut(s)	61
BsrDI	GCAATG	1 cut(s)	2517
BsrFI	RCCGGY	1 cut(s)	239
BssAI	RCCGGY	1 cut(s)	239
BssECI	CCNNGG	8 cut(s)	258, 449, 1185, 1388, 1473, 2291, 2385, 2414
BssMI	GATC	5 cut(s)	887, 1091, 1212, 1273, 2086
BssSI	CACGAG	2 cut(s)	462, 1907
BssT1I	CCWWGG	3 cut(s)	258, 1185, 2414
Bst2BI	CACGAG	2 cut(s)	462, 1907
Bst2UI	CCWGG	3 cut(s)	955, 1389, 2287
Bst4CI	ACNGT	9 cut(s)	1004, 1306, 1346, 1411, 1456, 1552, 2195, 2386, 2469
Bst6I	CTCTTC	2 cut(s)	1000, 1104
BstAPI	GCANNNNNTGC	2 cut(s)	167, 797
BstBAI	YACGTR	2 cut(s)	154, 1993
BstC8I	GCNNGC	5 cut(s)	595, 966, 1624, 2135, 2139
BstDSI	CCRYGG	2 cut(s)	1185, 2385
BstEII	GGTNACC	2 cut(s)	280, 2225
BstF5I	GGATG	9 cut(s)	163, 475, 663, 778, 1317, 1399, 1579, 1600, 1716
BstH2I	RGCGCY	2 cut(s)	193, 1694
BstHHI	GCGC	2 cut(s)	192, 1693
BstKTI	GATC	5 cut(s)	890, 1094, 1215, 1276, 2089
BstMAI	GTCTC	5 cut(s)	116, 223, 605, 2370, 2414
BstMBI	GATC	5 cut(s)	887, 1091, 1212, 1273, 2086
BstMCI	CGRYCG	1 cut(s)	972
BstNI	CCWGG	3 cut(s)	955, 1389, 2287
BstNSI	RCATGY	2 cut(s)	968, 1957
BstPI	GGTNACC	2 cut(s)	280, 2225
BstSCI	CCNGG	7 cut(s)	301, 448, 449, 953, 1387, 2285, 2290
BstSFI	CTRYAG	2 cut(s)	705, 1327
BstSLI	GKGCMC	1 cut(s)	1454
BstV1I	GCAGC	8 cut(s)	64, 494, 1063, 1269, 1680, 1741, 1744, 1805
BstV2I	GAAGAC	1 cut(s)	395
BstX2I	RGATCY	2 cut(s)	1091, 2086
BstYI	RGATCY	2 cut(s)	1091, 2086
BstZI	CGGCCG	1 cut(s)	969
Bsu36I	CCTNAGG	1 cut(s)	646
BsuRI	GGCC	7 cut(s)	89, 444, 971, 1522, 2290, 2390, 2413
BtgI	CCRYGG	2 cut(s)	1185, 2385
BtgZI	GCGATG	1 cut(s)	1785
BtsCI	GGATG	9 cut(s)	163, 475, 663, 778, 1317, 1399, 1579, 1600, 1716
BtsI	GCAGTG	2 cut(s)	1669, 2489
BtsIMutI	CAGTG	6 cut(s)	1278, 1416, 1452, 1548, 1669, 2489
BveI	ACCTGC	1 cut(s)	794
Cac8I	GCNNGC	5 cut(s)	595, 966, 1624, 2135, 2139
CaiI	CAGNNNCTG	2 cut(s)	1757, 2090
CciI	TCATGA	2 cut(s)	720, 2443
CfoI	GCGC	2 cut(s)	192, 1693
Cfr10I	RCCGGY	1 cut(s)	239
Cfr13I	GGNCC	5 cut(s)	330, 442, 1520, 1819, 2389
Cfr9I	CCCGGG	1 cut(s)	449
Csp6I	GTAC	3 cut(s)	852, 983, 1302
CspAI	ACCGGT	1 cut(s)	239
CspCI	CAANNNNNGTGG	2 cut(s)	2187, 2222
CviQI	GTAC	3 cut(s)	852, 983, 1302
DpnI	GATC	5 cut(s)	889, 1093, 1214, 1275, 2088
DpnII	GATC	5 cut(s)	887, 1091, 1212, 1273, 2086
DrdI	GACNNNNNNGTC	1 cut(s)	1420
DseDI	GACNNNNNNGTC	1 cut(s)	1420
EaeI	YGGCCR	2 cut(s)	87, 969
EagI	CGGCCG	1 cut(s)	969
Eam1104I	CTCTTC	2 cut(s)	1000, 1104
EarI	CTCTTC	2 cut(s)	1000, 1104
EciI	GGCGGA	2 cut(s)	96, 166
EclXI	CGGCCG	1 cut(s)	969
Eco130I	CCWWGG	3 cut(s)	258, 1185, 2414
Eco147I	AGGCCT	1 cut(s)	2413
Eco24I	GRGCYC	1 cut(s)	20
Eco31I	GGTCTC	2 cut(s)	2370, 2414
Eco32I	GATATC	2 cut(s)	252, 400
Eco47I	GGWCC	2 cut(s)	330, 1819
Eco52I	CGGCCG	1 cut(s)	969
Eco81I	CCTNAGG	1 cut(s)	646
Eco88I	CYCGRG	2 cut(s)	449, 1472
Eco91I	GGTNACC	2 cut(s)	280, 2225
EcoO109I	RGGNCCY	1 cut(s)	1819
EcoO65I	GGTNACC	2 cut(s)	280, 2225
EcoRI	GAATTC	1 cut(s)	822
EcoRII	CCWGG	3 cut(s)	953, 1387, 2285
EcoRV	GATATC	2 cut(s)	252, 400
EcoT14I	CCWWGG	3 cut(s)	258, 1185, 2414
EcoT38I	GRGCYC	1 cut(s)	20
ErhI	CCWWGG	3 cut(s)	258, 1185, 2414
Esp3I	CGTCTC	1 cut(s)	223
FaqI	GGGAC	4 cut(s)	377, 627, 683, 1832
FauI	CCCGC	1 cut(s)	2126
FauNDI	CATATG	1 cut(s)	1633
FbaI	TGATCA	1 cut(s)	1273
FblI	GTMKAC	1 cut(s)	342
FokI	GGATG	9 cut(s)	150, 482, 650, 765, 1304, 1406, 1586, 1587, 1723
FriOI	GRGCYC	1 cut(s)	20
FspBI	CTAG	5 cut(s)	1055, 1578, 1623, 2048, 2495
GlaI	GCGC	2 cut(s)	191, 1692
GsaI	CCCAGC	1 cut(s)	1893
HaeII	RGCGCY	2 cut(s)	193, 1694
HaeIII	GGCC	7 cut(s)	89, 444, 971, 1522, 2290, 2390, 2413
HapII	CCGG	6 cut(s)	240, 302, 450, 667, 972, 2291
HhaI	GCGC	2 cut(s)	192, 1693
Hin6I	GCGC	2 cut(s)	190, 1691
HinP1I	GCGC	2 cut(s)	190, 1691
HincII	GTYRAC	1 cut(s)	343
HindII	GTYRAC	1 cut(s)	343
HindIII	AAGCTT	4 cut(s)	680, 1217, 1466, 2202
HpaII	CCGG	6 cut(s)	240, 302, 450, 667, 972, 2291
HphI	GGTGA	4 cut(s)	274, 818, 878, 2237
Hpy166II	GTNNAC	6 cut(s)	343, 554, 983, 1452, 1548, 2198
Hpy8I	GTNNAC	6 cut(s)	343, 554, 983, 1452, 1548, 2198
Hpy99I	CGWCG	2 cut(s)	344, 347
HpyAV	CCTTC	6 cut(s)	40, 89, 181, 1025, 1137, 2113
HpyCH4III	ACNGT	9 cut(s)	1004, 1306, 1346, 1411, 1456, 1552, 2195, 2386, 2469
HpyCH4IV	ACGT	5 cut(s)	153, 765, 1803, 1992, 2238
HpySE526I	ACGT	5 cut(s)	153, 765, 1803, 1992, 2238
HspAI	GCGC	2 cut(s)	190, 1691
KflI	GGGWCCC	1 cut(s)	1819
Kpn2I	TCCGGA	1 cut(s)	666
Ksp22I	TGATCA	1 cut(s)	1273
Kzo9I	GATC	5 cut(s)	887, 1091, 1212, 1273, 2086
LmnI	GCTCC	4 cut(s)	109, 1950, 2350, 2404
Lsp1109I	GCAGC	8 cut(s)	64, 494, 1063, 1269, 1680, 1741, 1744, 1805
MaeI	CTAG	5 cut(s)	1055, 1578, 1623, 2048, 2495
MaeII	ACGT	5 cut(s)	153, 765, 1803, 1992, 2238
MaeIII	GTNAC	7 cut(s)	266, 280, 1405, 1411, 1915, 2002, 2225
MalI	GATC	5 cut(s)	889, 1093, 1214, 1275, 2088
MbiI	CCGCTC	1 cut(s)	61
MboI	GATC	5 cut(s)	887, 1091, 1212, 1273, 2086
MboII	GAAGA	8 cut(s)	400, 745, 897, 917, 987, 1091, 1128, 1578
MfeI	CAATTG	2 cut(s)	792, 1869
MflI	RGATCY	2 cut(s)	1091, 2086
MhlI	GDGCHC	3 cut(s)	20, 604, 1454
MlyI	GAGTC	4 cut(s)	607, 704, 705, 2305
MmeI	TCCRAC	1 cut(s)	806
MroI	TCCGGA	1 cut(s)	666
MroXI	GAANNNNTTC	2 cut(s)	1035, 1585
MseI	TTAA	4 cut(s)	65, 762, 1464, 1503
MslI	CAYNNNNRTG	3 cut(s)	963, 1281, 1572
MspA1I	CMGCKG	3 cut(s)	86, 1754, 1796
MspI	CCGG	6 cut(s)	240, 302, 450, 667, 972, 2291
MspR9I	CCNGG	7 cut(s)	303, 450, 451, 955, 1389, 2287, 2292
MunI	CAATTG	2 cut(s)	792, 1869
MvaI	CCWGG	3 cut(s)	955, 1389, 2287
NciI	CCSGG	4 cut(s)	303, 450, 451, 2292
NcoI	CCATGG	1 cut(s)	1185
NdeI	CATATG	1 cut(s)	1633
NdeII	GATC	5 cut(s)	887, 1091, 1212, 1273, 2086
NheI	GCTAGC	1 cut(s)	1622
NlaIV	GGNNCC	7 cut(s)	211, 349, 1006, 1820, 1821, 2192, 2391
NmuCI	GTSAC	5 cut(s)	266, 280, 1411, 1915, 2225
NspI	RCATGY	2 cut(s)	968, 1957
PaeI	GCATGC	1 cut(s)	968
PagI	TCATGA	2 cut(s)	720, 2443
PaqCI	CACCTGC	1 cut(s)	794
PceI	AGGCCT	1 cut(s)	2413
PdmI	GAANNNNTTC	2 cut(s)	1035, 1585
PfeI	GAWTC	9 cut(s)	473, 559, 581, 840, 1115, 1672, 1970, 2018, 2486
PflMI	CCANNNNNTGG	1 cut(s)	2386
PinAI	ACCGGT	1 cut(s)	239
PleI	GAGTC	4 cut(s)	607, 704, 704, 2304
PpsI	GAGTC	4 cut(s)	607, 704, 704, 2304
Ppu21I	YACGTR	2 cut(s)	154, 1993
PpuMI	RGGWCCY	1 cut(s)	1819
Psp1406I	AACGTT	1 cut(s)	765
Psp5II	RGGWCCY	1 cut(s)	1819
Psp6I	CCWGG	3 cut(s)	953, 1387, 2285
PspEI	GGTNACC	2 cut(s)	280, 2225
PspFI	CCCAGC	1 cut(s)	1889
PspGI	CCWGG	3 cut(s)	953, 1387, 2285
PspN4I	GGNNCC	7 cut(s)	211, 349, 1006, 1820, 1821, 2192, 2391
PspPI	GGNCC	5 cut(s)	330, 442, 1520, 1819, 2389
PspPPI	RGGWCCY	1 cut(s)	1819
PstNI	CAGNNNCTG	2 cut(s)	1757, 2090
PsuI	RGATCY	2 cut(s)	1091, 2086
PvuII	CAGCTG	2 cut(s)	1754, 1796
RsaI	GTAC	3 cut(s)	853, 984, 1303
RsaNI	GTAC	3 cut(s)	852, 983, 1302
RseI	CAYNNNNRTG	3 cut(s)	963, 1281, 1572
SalI	GTCGAC	1 cut(s)	341
SaqAI	TTAA	4 cut(s)	65, 762, 1464, 1503
Sau3AI	GATC	5 cut(s)	887, 1091, 1212, 1273, 2086
Sau96I	GGNCC	5 cut(s)	330, 442, 1520, 1819, 2389
SchI	GAGTC	4 cut(s)	607, 704, 705, 2305
ScrFI	CCNGG	7 cut(s)	303, 450, 451, 955, 1389, 2287, 2292
SduI	GDGCHC	3 cut(s)	20, 604, 1454
SfcI	CTRYAG	2 cut(s)	705, 1327
SgrDI	CGTCGACG	1 cut(s)	341
SinI	GGWCC	2 cut(s)	330, 1819
SmaI	CCCGGG	1 cut(s)	451
SmiMI	CAYNNNNRTG	3 cut(s)	963, 1281, 1572
SphI	GCATGC	1 cut(s)	968
SseBI	AGGCCT	1 cut(s)	2413
SspI	AATATT	1 cut(s)	2179
SspMI	CTAG	5 cut(s)	1055, 1578, 1623, 2048, 2495
StuI	AGGCCT	1 cut(s)	2413
StyD4I	CCNGG	7 cut(s)	301, 448, 449, 953, 1387, 2285, 2290
StyI	CCWWGG	3 cut(s)	258, 1185, 2414
TaaI	ACNGT	9 cut(s)	1004, 1306, 1346, 1411, 1456, 1552, 2195, 2386, 2469
TaiI	ACGT	5 cut(s)	156, 768, 1806, 1995, 2241
TaqI	TCGA	5 cut(s)	6, 12, 342, 616, 713
TatI	WGTACW	1 cut(s)	982
TauI	GCSGC	4 cut(s)	89, 144, 803, 971
TfiI	GAWTC	9 cut(s)	473, 559, 581, 840, 1115, 1672, 1970, 2018, 2486
Tru1I	TTAA	4 cut(s)	65, 762, 1464, 1503
Tru9I	TTAA	4 cut(s)	65, 762, 1464, 1503
TscAI	CASTG	6 cut(s)	1285, 1416, 1459, 1555, 1669, 2496
TseFI	GTSAC	5 cut(s)	266, 280, 1411, 1915, 2225
TseI	GCWGC	8 cut(s)	52, 482, 1051, 1257, 1693, 1754, 1757, 1793
Tsp45I	GTSAC	5 cut(s)	266, 280, 1411, 1915, 2225
TspGWI	ACGGA	5 cut(s)	277, 328, 420, 571, 691
TspMI	CCCGGG	1 cut(s)	449
TspRI	CASTG	6 cut(s)	1285, 1416, 1459, 1555, 1669, 2496
Van91I	CCANNNNNTGG	1 cut(s)	2386
VneI	GTGCAC	1 cut(s)	1450
VpaK11BI	GGWCC	2 cut(s)	330, 1819
XapI	RAATTY	6 cut(s)	653, 822, 1161, 1505, 1534, 1581
XceI	RCATGY	2 cut(s)	968, 1957
XcmI	CCANNNNNNNNNTGG	2 cut(s)	418, 2103
XmaI	CCCGGG	1 cut(s)	449
XmiI	GTMKAC	1 cut(s)	342
XmnI	GAANNNNTTC	2 cut(s)	1035, 1585
XspI	CTAG	5 cut(s)	1055, 1578, 1623, 2048, 2495

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.