AT2G32920

Belongs to the protein disulfide isomerase family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
13962213 .. 13965531
3319 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G32920.1

Sequence Viewer

Length: 1323 bp
ATGTATAAATCACCATTAACGTTGCTCACACTTCTTACTATTTGTTTTGGATTCTTCGATCTCAGCAGTGCTCTTTATGGATCTTCGTCACCTGTGGTTCAGCTCACTGCTTCTAACTTTAAGTCCAAGGTTCTTAATTCAAATGGAGTTGTTTTGGTAGAGTTCTTTGCACCATGGTGTGGTCATTGCAAAGCTCTAACACCTACATGGGAGAAAGTGGCTAATATTCTGAAAGGAGTTGCTACTGTGGCTGCAATTGATGCAGATGCTCATCAGTCTGCCGCGCAGGATTATGGTATTAAAGGTTTCCCAACAATTAAGGTTTTTGTTCCTGGAAAGGCTCCAATCGATTACCAAGGAGCAAGAGATGCCAAATCCATTGCTAATTTTGCTTATAAGCAGATCAAGGGTCTTTTGAGTGACCGTTTGGAAGGCAAAAGTAAACCAACTGGAGGAGGATCTAAAGAAAAGAAATCTGAACCTAGTGCATCTGTGGAACTGAACGCTAGCAATTTTGATGATTTGGTCATCGAAAGCAATGAACTTTGGATCGTTGAGTTTTTTGCACCTTGGTGTGGACATTGCAAAAAGCTTGCCCCGGAGTGGAAGAGGGCTGCAAAAAATTTGCAGGGAAAGGTGAAATTAGGTCATGTCAATTGTGATGTTGAGCAGTCGATAATGAGCAGATTCAAAGTTCAAGGATTCCCTACAATTTTGGTATTTGGTCCAGACAAAAGTAGTCCATATCCTTACGAGGGTGCTAGATCTGCTTCAGCGATAGAATCTTTTGCTTCTGAACTTGTGGAATCCAGTGCTGGCCCTGTTGAAGTGACTGAACTAACTGGACCGGATGTCATGGAAAAGAAGTGTGGTTCTGCTGCTATTTGCTTTATCTCTTTCTTACCTGACATTCTTGACTCCAAAGCTGAAGGAAGGAATAAGTACCTCGAGATGTTATTATCAGTTGCAGAGAAGTTTAAGAAGCAGCCTTACAGTTTTATGTGGGTGGCGGCTGTAACTCAAATGGATTTGGAGAAGCGAGTTAATGTAGGAGGATACGGTTATCCAGCAATGGTAGCCATGAATGTGAAGAAAGGAGTATATGCTCCTCTTAAAAGCGCCTTTGAGCTTCAACACCTCTTAGAATTTGTGAAAGATGCTGGAACCGGTGGAAAAGGAAATGTGCCAATGAATGGAACACCAGAGATCGTGAAGACAAAGGAGTGGGATGGTAAAGATGGAGAGTTGATTGAGGAAGATGAATTCTCACTTGATGAGCTCATGGGAGGTGATGATGCTGTTGGTTCTAAGGATGAGTTGTGA

Protein Analysis

440

Amino Acids

47.75

Weight (kDa)

5.63

Isoelectric Point (pI)

32.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Thioredoxin PF00085 32 - 131 4.3e-31 Thioredoxin
Thioredoxin PF00085 165 - 264 4.2e-28 Thioredoxin
Thioredoxin_6 PF13848 198 - 386 6.7e-07 Thioredoxin-like domain
Thioredox_PDIA6_C PF24541 274 - 386 4.2e-08 PDIA6-like, C-terminal thioredoxin-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0014581)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G04980 AT2G32920
fragaria_vesca FvH4_6g41940
malus_domestica MD09G1116100.v1.1 MD17G1107800.v1.1
prunus_persica Prupe.3G208600_v2.0.a1
pyrus_communis pycom09g04050
rosa_chinensis RchiOBHm_Chr2g0157821
rosa_laevigata RLG00000021023
rosa_multiflora Rmu_sc0002441.1_g000014
rosa_roxburghii Rroxscaffold_2G00091920
rosa_rugosa Rorug02G0464000
rosa_samantha Rh2AG529300 Rh2BG543400 Rh2CG513600 Rh2DG552200
rosa_wichuraiana Rw2G043760

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 396
AccB7I CCANNNNNTGG 2 cut(s) 179, 1193
AccII CGCG 1 cut(s) 284
AciI CCGC 2 cut(s) 282, 1010
AclI AACGTT 1 cut(s) 20
AclWI GGATC 3 cut(s) 88, 466, 557
AcsI RAATTY 3 cut(s) 622, 1145, 1262
AcuI CTGAAG 2 cut(s) 756, 948
AfaI GTAC 1 cut(s) 944
AfiI CCNNNNNNNGG 6 cut(s) 179, 452, 575, 603, 755, 1193
AgeI ACCGGT 1 cut(s) 1166
AgsI TTSAA 5 cut(s) 141, 691, 698, 827, 1133
AhdI GACNNNNNGTC 1 cut(s) 851
AjnI CCWGG 1 cut(s) 331
AleI CACNNNNGTG 2 cut(s) 175, 571
AluBI AGCT 6 cut(s) 103, 194, 592, 926, 1129, 1279
AluI AGCT 6 cut(s) 103, 194, 592, 926, 1129, 1279
Alw21I GWGCWC 2 cut(s) 73, 1281
AlwI GGATC 3 cut(s) 88, 466, 557
Ama87I CYCGRG 1 cut(s) 947
AoxI GGCC 1 cut(s) 817
ApeKI GCWGC 4 cut(s) 251, 614, 878, 985
ApoI RAATTY 3 cut(s) 622, 1145, 1262
AsiGI ACCGGT 1 cut(s) 1166
AspLEI GCGC 2 cut(s) 286, 1121
AspS9I GGNCC 3 cut(s) 725, 818, 845
AsuC2I CCSGG 1 cut(s) 599
AsuHPI GGTGA 4 cut(s) 3, 81, 649, 1301
AsuNHI GCTAGC 1 cut(s) 506
AvaI CYCGRG 1 cut(s) 947
AvaII GGWCC 2 cut(s) 725, 845
BanII GRGCYC 1 cut(s) 1281
BarI GAAGNNNNNNTAC 2 cut(s) 974, 1006
BbsI GAAGAC 1 cut(s) 1220
Bbv12I GWGCWC 2 cut(s) 73, 1281
BbvI GCAGC 4 cut(s) 238, 601, 865, 997
BccI CCATC 2 cut(s) 1223, 1232
BciT130I CCWGG 1 cut(s) 333
BciVI GTATCC 1 cut(s) 1049
BcnI CCSGG 1 cut(s) 599
BfaI CTAG 3 cut(s) 483, 507, 762
BfoI RGCGCY 1 cut(s) 1122
BfuI GTATCC 1 cut(s) 1049
BglII AGATCT 1 cut(s) 764
BisI GCNGC 6 cut(s) 252, 282, 615, 879, 986, 1011
BlsI GCNGC 6 cut(s) 253, 283, 616, 880, 987, 1012
Bme1390I CCNGG 2 cut(s) 333, 599
Bme18I GGWCC 2 cut(s) 725, 845
BmeRI GACNNNNNGTC 1 cut(s) 851
BmeT110I CYCGRG 1 cut(s) 947
BmgT120I GGNCC 3 cut(s) 725, 818, 845
BmiI GGNNCC 2 cut(s) 342, 1165
BmrFI CCNGG 2 cut(s) 333, 599
BmsI GCATC 6 cut(s) 250, 256, 358, 497, 1147, 1285
BmtI GCTAGC 1 cut(s) 510
BpiI GAAGAC 1 cut(s) 1220
BpmI CTGGAG 1 cut(s) 471
BpuMI CCSGG 1 cut(s) 599
Bsa29I ATCGAT 1 cut(s) 348
BsaBI GATNNNNATC 1 cut(s) 270
BsaJI CCNNGG 5 cut(s) 126, 173, 355, 569, 597
BsaWI WCCGGW 2 cut(s) 847, 1166
Bsc4I CCNNNNNNNGG 6 cut(s) 179, 452, 575, 603, 755, 1193
Bse118I RCCGGY 1 cut(s) 1166
Bse1I ACTGG 3 cut(s) 454, 810, 847
Bse3DI GCAATG 5 cut(s) 184, 378, 544, 580, 1077
Bse8I GATNNNNATC 1 cut(s) 270
BseBI CCWGG 1 cut(s) 333
BseCI ATCGAT 1 cut(s) 348
BseDI CCNNGG 5 cut(s) 126, 173, 355, 569, 597
BseGI GGATG 3 cut(s) 856, 1234, 1318
BseJI GATNNNNATC 1 cut(s) 270
BseLI CCNNNNNNNGG 6 cut(s) 179, 452, 575, 603, 755, 1193
BseMI GCAATG 5 cut(s) 184, 378, 544, 580, 1077
BseMII CTCAG 1 cut(s) 76
BseNI ACTGG 3 cut(s) 454, 810, 847
BseRI GAGGAG 2 cut(s) 468, 1098
BseXI GCAGC 4 cut(s) 238, 601, 865, 997
Bsh1236I CGCG 1 cut(s) 284
BshFI GGCC 1 cut(s) 819
BshTI ACCGGT 1 cut(s) 1166
BshVI ATCGAT 1 cut(s) 348
BsiHKAI GWGCWC 2 cut(s) 73, 1281
BsiHKCI CYCGRG 1 cut(s) 947
BsiSI CCGG 3 cut(s) 599, 848, 1167
BslI CCNNNNNNNGG 6 cut(s) 179, 452, 575, 603, 755, 1193
BsnI GGCC 1 cut(s) 819
BsoBI CYCGRG 1 cut(s) 947
Bsp1286I GDGCHC 2 cut(s) 73, 1281
Bsp143I GATC 7 cut(s) 58, 80, 402, 458, 549, 764, 1206
Bsp19I CCATGG 1 cut(s) 173
BspACI CCGC 2 cut(s) 282, 1010
BspANI GGCC 1 cut(s) 819
BspCNI CTCAG 1 cut(s) 75
BspDI ATCGAT 1 cut(s) 348
BspFNI CGCG 1 cut(s) 284
BspLI GGNNCC 2 cut(s) 342, 1165
BspOI GCTAGC 1 cut(s) 510
BspPI GGATC 3 cut(s) 88, 466, 557
BsrDI GCAATG 5 cut(s) 184, 378, 544, 580, 1077
BsrFI RCCGGY 1 cut(s) 1166
BsrI ACTGG 3 cut(s) 454, 810, 847
BssAI RCCGGY 1 cut(s) 1166
BssECI CCNNGG 5 cut(s) 126, 173, 355, 569, 597
BssMI GATC 7 cut(s) 58, 80, 402, 458, 549, 764, 1206
BssT1I CCWWGG 4 cut(s) 126, 173, 355, 569
Bst2UI CCWGG 1 cut(s) 333
Bst4CI ACNGT 4 cut(s) 247, 425, 995, 1061
Bst6I CTCTTC 1 cut(s) 602
BstAPI GCANNNNNTGC 2 cut(s) 260, 368
BstC8I GCNNGC 3 cut(s) 508, 594, 817
BstDEI CTNAG 3 cut(s) 62, 1141, 1308
BstDSI CCRYGG 1 cut(s) 173
BstF5I GGATG 3 cut(s) 856, 1234, 1318
BstFNI CGCG 1 cut(s) 284
BstH2I RGCGCY 1 cut(s) 1122
BstHHI GCGC 2 cut(s) 286, 1121
BstKTI GATC 7 cut(s) 61, 83, 405, 461, 552, 767, 1209
BstMBI GATC 7 cut(s) 58, 80, 402, 458, 549, 764, 1206
BstMWI GCNNNNNNNGC 6 cut(s) 248, 260, 368, 389, 767, 1076
BstNI CCWGG 1 cut(s) 333
BstSCI CCNGG 2 cut(s) 331, 597
BstUI CGCG 1 cut(s) 284
BstV1I GCAGC 4 cut(s) 238, 601, 865, 997
BstV2I GAAGAC 1 cut(s) 1220
BstX2I RGATCY 3 cut(s) 80, 458, 764
BstYI RGATCY 3 cut(s) 80, 458, 764
Bsu15I ATCGAT 1 cut(s) 348
BsuI GTATCC 1 cut(s) 1049
BsuRI GGCC 1 cut(s) 819
BsuTUI ATCGAT 1 cut(s) 348
BtgI CCRYGG 1 cut(s) 173
BtsCI GGATG 3 cut(s) 856, 1234, 1318
BtsI GCAGTG 2 cut(s) 73, 105
BtsIMutI CAGTG 3 cut(s) 73, 105, 817
Cac8I GCNNGC 3 cut(s) 508, 594, 817
CfoI GCGC 2 cut(s) 286, 1121
Cfr10I RCCGGY 1 cut(s) 1166
Cfr13I GGNCC 3 cut(s) 725, 818, 845
ClaI ATCGAT 1 cut(s) 348
Csp6I GTAC 1 cut(s) 943
CspAI ACCGGT 1 cut(s) 1166
CviAII CATG 6 cut(s) 174, 207, 650, 856, 1081, 1282
CviQI GTAC 1 cut(s) 943
DdeI CTNAG 3 cut(s) 62, 1141, 1308
DpnI GATC 7 cut(s) 60, 82, 404, 460, 551, 766, 1208
DpnII GATC 7 cut(s) 58, 80, 402, 458, 549, 764, 1206
DriI GACNNNNNGTC 1 cut(s) 851
Eam1104I CTCTTC 1 cut(s) 602
Eam1105I GACNNNNNGTC 1 cut(s) 851
EarI CTCTTC 1 cut(s) 602
Ecl136II GAGCTC 1 cut(s) 1279
Eco130I CCWWGG 4 cut(s) 126, 173, 355, 569
Eco24I GRGCYC 1 cut(s) 1281
Eco47I GGWCC 2 cut(s) 725, 845
Eco53kI GAGCTC 1 cut(s) 1279
Eco57I CTGAAG 2 cut(s) 756, 948
Eco88I CYCGRG 1 cut(s) 947
EcoICRI GAGCTC 1 cut(s) 1279
EcoRI GAATTC 1 cut(s) 1262
EcoRII CCWGG 1 cut(s) 331
EcoT14I CCWWGG 4 cut(s) 126, 173, 355, 569
EcoT38I GRGCYC 1 cut(s) 1281
ErhI CCWWGG 4 cut(s) 126, 173, 355, 569
FaeI CATG 6 cut(s) 177, 210, 653, 859, 1084, 1285
FatI CATG 6 cut(s) 173, 206, 649, 855, 1080, 1281
Fnu4HI GCNGC 6 cut(s) 252, 282, 615, 879, 986, 1011
FokI GGATG 2 cut(s) 863, 1241
FriOI GRGCYC 1 cut(s) 1281
Fsp4HI GCNGC 6 cut(s) 252, 282, 615, 879, 986, 1011
FspBI CTAG 3 cut(s) 483, 507, 762
GlaI GCGC 2 cut(s) 285, 1120
GluI GCNGC 6 cut(s) 252, 282, 615, 879, 986, 1011
GsuI CTGGAG 1 cut(s) 471
HaeII RGCGCY 1 cut(s) 1122
HaeIII GGCC 1 cut(s) 819
HapII CCGG 3 cut(s) 599, 848, 1167
HhaI GCGC 2 cut(s) 286, 1121
Hin1II CATG 6 cut(s) 177, 210, 653, 859, 1084, 1285
Hin6I GCGC 2 cut(s) 284, 1119
HinP1I GCGC 2 cut(s) 284, 1119
HindIII AAGCTT 1 cut(s) 590
HinfI GANTC 6 cut(s) 51, 687, 702, 782, 806, 917
HpaII CCGG 3 cut(s) 599, 848, 1167
HphI GGTGA 4 cut(s) 3, 81, 649, 1301
Hpy166II GTNNAC 2 cut(s) 443, 578
Hpy188I TCNGA 3 cut(s) 231, 478, 796
Hpy188III TCNNGA 4 cut(s) 728, 914, 949, 1210
Hpy8I GTNNAC 2 cut(s) 443, 578
HpyAV CCTTC 3 cut(s) 425, 923, 927
HpyCH4III ACNGT 4 cut(s) 247, 425, 995, 1061
HpyCH4IV ACGT 1 cut(s) 20
HpyF10VI GCNNNNNNNGC 6 cut(s) 248, 260, 368, 389, 767, 1076
HpyF3I CTNAG 3 cut(s) 62, 1141, 1308
HpySE526I ACGT 1 cut(s) 20
Hsp92II CATG 6 cut(s) 177, 210, 653, 859, 1084, 1285
HspAI GCGC 2 cut(s) 284, 1119
Kzo9I GATC 7 cut(s) 58, 80, 402, 458, 549, 764, 1206
LmnI GCTCC 3 cut(s) 346, 359, 1111
Lsp1109I GCAGC 4 cut(s) 238, 601, 865, 997
LweI GCATC 6 cut(s) 250, 256, 358, 497, 1147, 1285
MaeI CTAG 3 cut(s) 483, 507, 762
MaeII ACGT 1 cut(s) 20
MaeIII GTNAC 4 cut(s) 87, 419, 829, 1015
MalI GATC 7 cut(s) 60, 82, 404, 460, 551, 766, 1208
MboI GATC 7 cut(s) 58, 80, 402, 458, 549, 764, 1206
MboII GAAGA 6 cut(s) 46, 75, 619, 1102, 1225, 1268
MfeI CAATTG 2 cut(s) 255, 655
MflI RGATCY 3 cut(s) 80, 458, 764
MhlI GDGCHC 2 cut(s) 73, 1281
MlyI GAGTC 1 cut(s) 911
MseI TTAA 8 cut(s) 17, 120, 135, 300, 318, 978, 1044, 1113
MslI CAYNNNNRTG 4 cut(s) 175, 205, 571, 1085
MspI CCGG 3 cut(s) 599, 848, 1167
MspR9I CCNGG 2 cut(s) 333, 599
MunI CAATTG 2 cut(s) 255, 655
MvaI CCWGG 1 cut(s) 333
MvnI CGCG 1 cut(s) 284
MwoI GCNNNNNNNGC 6 cut(s) 248, 260, 368, 389, 767, 1076
NciI CCSGG 1 cut(s) 599
NcoI CCATGG 1 cut(s) 173
NdeII GATC 7 cut(s) 58, 80, 402, 458, 549, 764, 1206
NheI GCTAGC 1 cut(s) 506
NlaIII CATG 6 cut(s) 177, 210, 653, 859, 1084, 1285
NlaIV GGNNCC 2 cut(s) 342, 1165
NmuCI GTSAC 3 cut(s) 87, 419, 829
OliI CACNNNNGTG 2 cut(s) 175, 571
PaeR7I CTCGAG 1 cut(s) 947
PfeI GAWTC 5 cut(s) 51, 687, 702, 782, 806
PflMI CCANNNNNTGG 2 cut(s) 179, 1193
PfoI TCCNGGA 1 cut(s) 331
PinAI ACCGGT 1 cut(s) 1166
PkrI GCNGC 6 cut(s) 253, 283, 616, 880, 987, 1012
PleI GAGTC 1 cut(s) 911
PpsI GAGTC 1 cut(s) 911
PsiI TTATAA 1 cut(s) 396
Psp124BI GAGCTC 1 cut(s) 1281
Psp1406I AACGTT 1 cut(s) 20
Psp6I CCWGG 1 cut(s) 331
PspGI CCWGG 1 cut(s) 331
PspN4I GGNNCC 2 cut(s) 342, 1165
PspPI GGNCC 3 cut(s) 725, 818, 845
PsuI RGATCY 3 cut(s) 80, 458, 764
RsaI GTAC 1 cut(s) 944
RsaNI GTAC 1 cut(s) 943
RseI CAYNNNNRTG 4 cut(s) 175, 205, 571, 1085
SacI GAGCTC 1 cut(s) 1281
SaqAI TTAA 8 cut(s) 17, 120, 135, 300, 318, 978, 1044, 1113
SatI GCNGC 6 cut(s) 252, 282, 615, 879, 986, 1011
Sau3AI GATC 7 cut(s) 58, 80, 402, 458, 549, 764, 1206
Sau96I GGNCC 3 cut(s) 725, 818, 845
SchI GAGTC 1 cut(s) 911
ScrFI CCNGG 2 cut(s) 333, 599
SduI GDGCHC 2 cut(s) 73, 1281
SfaNI GCATC 6 cut(s) 250, 256, 358, 497, 1147, 1285
Sfr274I CTCGAG 1 cut(s) 947
SinI GGWCC 2 cut(s) 725, 845
SlaI CTCGAG 1 cut(s) 947
SmiMI CAYNNNNRTG 4 cut(s) 175, 205, 571, 1085
SmlI CTYRAG 1 cut(s) 947
SmoI CTYRAG 1 cut(s) 947
SsiI CCGC 2 cut(s) 282, 1010
SspI AATATT 1 cut(s) 226
SspMI CTAG 3 cut(s) 483, 507, 762
SstI GAGCTC 1 cut(s) 1281
StyD4I CCNGG 2 cut(s) 331, 597
StyI CCWWGG 4 cut(s) 126, 173, 355, 569
TaaI ACNGT 4 cut(s) 247, 425, 995, 1061
TaiI ACGT 1 cut(s) 23
TaqI TCGA 5 cut(s) 57, 348, 531, 674, 948
TauI GCSGC 2 cut(s) 284, 1013
TfiI GAWTC 5 cut(s) 51, 687, 702, 782, 806
Tru1I TTAA 8 cut(s) 17, 120, 135, 300, 318, 978, 1044, 1113
Tru9I TTAA 8 cut(s) 17, 120, 135, 300, 318, 978, 1044, 1113
TscAI CASTG 3 cut(s) 73, 112, 817
TseFI GTSAC 3 cut(s) 87, 419, 829
TseI GCWGC 4 cut(s) 251, 614, 878, 985
Tsp45I GTSAC 3 cut(s) 87, 419, 829
TspDTI ATGAA 4 cut(s) 555, 1097, 1205, 1275
TspRI CASTG 3 cut(s) 73, 112, 817
Van91I CCANNNNNTGG 2 cut(s) 179, 1193
VpaK11BI GGWCC 2 cut(s) 725, 845
XapI RAATTY 3 cut(s) 622, 1145, 1262
XhoI CTCGAG 1 cut(s) 947
XspI CTAG 3 cut(s) 483, 507, 762
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.