AT2G33735

domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0012874
Physical Location & Seq
Reverse (-)
14268269 .. 14269616
1348 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G33735.2

Sequence Viewer

Length: 360 bp
ATGTGGTGTTCCGATTGGGGAGACAGCCATGGCTTCGATTTTTTCGATTTCGAGGATTACAAGGATCACTATAAAGTTCTGGAATTGAACTGTGACGCTTCTGATGATGAGATTCGTTCCAGCTTTATCCGTCTTGCTCTGAAATGGCATCCGGACAAATTTAAAGAAGAGGATTCTGCTACGTCTAGGTTTCAAGAAATCAACGAGGCTTATCAAGTGTTGAGCGACCCAATTGCAAGGCAGGAGTACGATAAGAAAAGGATGCGTCGTATCTATGAGCACAACACGGAACTATTGAATGAGTACAAGGAGCTCATATTGACTTGCAATGGCCTTGGGGTGAAGCATTATCTTTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DnaJ

Protein Analysis

119

Amino Acids

14.44

Weight (kDa)

4.94

Isoelectric Point (pI)

50.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 22 - 84 1.2e-23 DnaJ domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012874)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G33735 AT2G33735
fragaria_vesca FvH4_5g35690
malus_domestica MD08G1194000.v1.1 MD15G1382100.v1.1
prunus_persica Prupe.1G528300_v2.0.a1
pyrus_communis pycom08g16690 pycom15g34210
rosa_chinensis RchiOBHm_Chr7g0237331
rosa_laevigata RLG00000001011
rosa_multiflora Rmu_sc0002923.1_g000039
rosa_roxburghii Rroxscaffold_3G00224310
rosa_rugosa Rorug07G0302800
rosa_samantha Rh7AG459900 Rh7BG429800 Rh7CG477200 Rh7DG446500
rosa_wichuraiana Rw7G038090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 151
AclWI GGATC 1 cut(s) 72
AcsI RAATTY 1 cut(s) 158
AfaI GTAC 2 cut(s) 248, 305
AgsI TTSAA 3 cut(s) 88, 194, 298
AluBI AGCT 2 cut(s) 123, 313
AluI AGCT 2 cut(s) 123, 313
Alw21I GWGCWC 2 cut(s) 282, 315
Alw26I GTCTC 1 cut(s) 15
AlwI GGATC 1 cut(s) 72
Aor13HI TCCGGA 1 cut(s) 151
AoxI GGCC 1 cut(s) 331
ApoI RAATTY 1 cut(s) 158
AsuHPI GGTGA 1 cut(s) 352
BanII GRGCYC 1 cut(s) 315
Bbv12I GWGCWC 2 cut(s) 282, 315
BcgI CGANNNNNNTGC 2 cut(s) 215, 249
BcoDI GTCTC 1 cut(s) 15
BfaI CTAG 1 cut(s) 186
BmsI GCATC 2 cut(s) 157, 252
BsaJI CCNNGG 2 cut(s) 28, 334
BsaWI WCCGGW 1 cut(s) 151
Bse3DI GCAATG 1 cut(s) 334
BseAI TCCGGA 1 cut(s) 151
BseDI CCNNGG 2 cut(s) 28, 334
BseGI GGATG 2 cut(s) 148, 267
BseMI GCAATG 1 cut(s) 334
BshFI GGCC 1 cut(s) 333
BsiHKAI GWGCWC 2 cut(s) 282, 315
BsiSI CCGG 1 cut(s) 152
BsmAI GTCTC 1 cut(s) 15
BsnI GGCC 1 cut(s) 333
Bsp1286I GDGCHC 2 cut(s) 282, 315
Bsp13I TCCGGA 1 cut(s) 151
Bsp143I GATC 1 cut(s) 64
Bsp19I CCATGG 1 cut(s) 28
BspANI GGCC 1 cut(s) 333
BspEI TCCGGA 1 cut(s) 151
BspPI GGATC 1 cut(s) 72
BsrDI GCAATG 1 cut(s) 334
BssECI CCNNGG 2 cut(s) 28, 334
BssMI GATC 1 cut(s) 64
BssT1I CCWWGG 2 cut(s) 28, 334
Bst4CI ACNGT 1 cut(s) 92
Bst6I CTCTTC 1 cut(s) 162
BstDSI CCRYGG 1 cut(s) 28
BstF5I GGATG 2 cut(s) 148, 267
BstKTI GATC 1 cut(s) 67
BstMAI GTCTC 1 cut(s) 15
BstMBI GATC 1 cut(s) 64
BsuRI GGCC 1 cut(s) 333
BtgI CCRYGG 1 cut(s) 28
BtsCI GGATG 2 cut(s) 148, 267
CseI GACGC 2 cut(s) 104, 254
Csp6I GTAC 2 cut(s) 247, 304
CviAII CATG 1 cut(s) 29
CviJI RGCY 6 cut(s) 27, 33, 123, 209, 313, 333
CviKI_1 RGCY 6 cut(s) 27, 33, 123, 209, 313, 333
CviQI GTAC 2 cut(s) 247, 304
DpnI GATC 1 cut(s) 66
DpnII GATC 1 cut(s) 64
DraI TTTAAA 1 cut(s) 163
Eam1104I CTCTTC 1 cut(s) 162
EarI CTCTTC 1 cut(s) 162
Ecl136II GAGCTC 1 cut(s) 313
Eco130I CCWWGG 2 cut(s) 28, 334
Eco24I GRGCYC 1 cut(s) 315
Eco53kI GAGCTC 1 cut(s) 313
EcoICRI GAGCTC 1 cut(s) 313
EcoT14I CCWWGG 2 cut(s) 28, 334
EcoT38I GRGCYC 1 cut(s) 315
ErhI CCWWGG 2 cut(s) 28, 334
FaeI CATG 1 cut(s) 32
FaiI YATR 4 cut(s) 30, 72, 276, 317
FatI CATG 1 cut(s) 28
FokI GGATG 2 cut(s) 135, 274
FriOI GRGCYC 1 cut(s) 315
FspBI CTAG 1 cut(s) 186
HaeIII GGCC 1 cut(s) 333
HapII CCGG 1 cut(s) 152
HgaI GACGC 2 cut(s) 104, 254
Hin1II CATG 1 cut(s) 32
HinfI GANTC 2 cut(s) 112, 173
HpaII CCGG 1 cut(s) 152
HphI GGTGA 1 cut(s) 352
Hpy188I TCNGA 3 cut(s) 13, 103, 141
Hpy188III TCNNGA 3 cut(s) 80, 152, 194
Hpy99I CGWCG 1 cut(s) 270
HpyCH4III ACNGT 1 cut(s) 92
HpyCH4IV ACGT 1 cut(s) 182
HpyCH4V TGCA 2 cut(s) 236, 327
HpySE526I ACGT 1 cut(s) 182
Hsp92II CATG 1 cut(s) 32
Kpn2I TCCGGA 1 cut(s) 151
Kzo9I GATC 1 cut(s) 64
LmnI GCTCC 1 cut(s) 310
LpnPI CCDG 4 cut(s) 65, 133, 165, 227
LweI GCATC 2 cut(s) 157, 252
MaeI CTAG 1 cut(s) 186
MaeII ACGT 1 cut(s) 182
MaeIII GTNAC 1 cut(s) 92
MalI GATC 1 cut(s) 66
MboI GATC 1 cut(s) 64
MboII GAAGA 1 cut(s) 179
MfeI CAATTG 1 cut(s) 231
MhlI GDGCHC 2 cut(s) 282, 315
MluCI AATT 3 cut(s) 83, 158, 231
MnlI CCTC 3 cut(s) 46, 163, 199
MroI TCCGGA 1 cut(s) 151
MseI TTAA 1 cut(s) 162
MspI CCGG 1 cut(s) 152
MunI CAATTG 1 cut(s) 231
NcoI CCATGG 1 cut(s) 28
NdeII GATC 1 cut(s) 64
NlaIII CATG 1 cut(s) 32
NmuCI GTSAC 1 cut(s) 92
PcsI WCGNNNNNNNCGW 1 cut(s) 42
PfeI GAWTC 2 cut(s) 112, 173
Psp124BI GAGCTC 1 cut(s) 315
RsaI GTAC 2 cut(s) 248, 305
RsaNI GTAC 2 cut(s) 247, 304
SacI GAGCTC 1 cut(s) 315
SaqAI TTAA 1 cut(s) 162
Sau3AI GATC 1 cut(s) 64
SduI GDGCHC 2 cut(s) 282, 315
SetI ASST 4 cut(s) 125, 185, 191, 315
SfaNI GCATC 2 cut(s) 157, 252
Sse9I AATT 3 cut(s) 83, 158, 231
SspMI CTAG 1 cut(s) 186
SstI GAGCTC 1 cut(s) 315
StyI CCWWGG 2 cut(s) 28, 334
TaaI ACNGT 1 cut(s) 92
TaiI ACGT 1 cut(s) 185
TaqI TCGA 3 cut(s) 36, 45, 51
TasI AATT 3 cut(s) 83, 158, 231
TatI WGTACW 1 cut(s) 303
TfiI GAWTC 2 cut(s) 112, 173
Tru1I TTAA 1 cut(s) 162
Tru9I TTAA 1 cut(s) 162
TseFI GTSAC 1 cut(s) 92
Tsp45I GTSAC 1 cut(s) 92
TspGWI ACGGA 2 cut(s) 119, 302
XapI RAATTY 1 cut(s) 158
XspI CTAG 1 cut(s) 186
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.