Prupe.1G528300_v2.0.a1

Chaperone protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0012874
Physical Location & Seq
Reverse (-)
43228214 .. 43233839
5626 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G528300.1

Sequence Viewer

Length: 414 bp
ATGATGTGGGACGAGTGGGACGACGCCAATTTCTCCCACACCGAACAACAGCAGCAACCCGACCCGGATTCCCACTTGAATTTCGATTTCTTCTCCGATCTTTCCAAGCCCAAGGATTACTATAAGATATTGGAAGTGGATTATGATGCCAACGACGACGCCATTCGCTCCAACTACATCCGCCTCGCCTTGAAATGGCATCCGGATAAGCAAAAAGACCAGGACAGTGCCACCACCAGGTTTCAAGAGATAAACGAGGCATATCAAGTTTTGAGTGATCCAGTGAAGAGAAGAGAATATGACAAGCAAGGGATGCTTTATGTCTATGATTACAATGTAACTGAGTATCTTAATCGCTACAAAGGTCTTATATTGACATGCAATGGCCTTGGGATAAGGCATTCAATTTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DnaJ

Protein Analysis

138

Amino Acids

16.5

Weight (kDa)

4.77

Isoelectric Point (pI)

38.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012874)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G33735 AT2G33735
fragaria_vesca FvH4_5g35690
malus_domestica MD08G1194000.v1.1 MD15G1382100.v1.1
prunus_persica Prupe.1G528300_v2.0.a1
pyrus_communis pycom08g16690 pycom15g34210
rosa_chinensis RchiOBHm_Chr7g0237331
rosa_laevigata RLG00000001011
rosa_multiflora Rmu_sc0002923.1_g000039
rosa_roxburghii Rroxscaffold_3G00224310
rosa_rugosa Rorug07G0302800
rosa_samantha Rh7AG459900 Rh7BG429800 Rh7CG477200 Rh7DG446500
rosa_wichuraiana Rw7G038090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 202
AciI CCGC 1 cut(s) 181
AclWI GGATC 1 cut(s) 272
AcsI RAATTY 1 cut(s) 79
AcyI GRCGYC 2 cut(s) 24, 159
AfiI CCNNNNNNNGG 2 cut(s) 195, 237
AgsI TTSAA 4 cut(s) 79, 193, 245, 405
AjnI CCWGG 2 cut(s) 219, 236
AlwI GGATC 1 cut(s) 272
Aor13HI TCCGGA 1 cut(s) 202
AoxI GGCC 1 cut(s) 385
ApeKI GCWGC 1 cut(s) 52
ApoI RAATTY 1 cut(s) 79
AsuC2I CCSGG 1 cut(s) 65
BbvI GCAGC 1 cut(s) 64
BciT130I CCWGG 2 cut(s) 221, 238
BcnI CCSGG 1 cut(s) 65
BisI GCNGC 1 cut(s) 53
BlsI GCNGC 1 cut(s) 54
Bme1390I CCNGG 3 cut(s) 65, 221, 238
BmrFI CCNGG 3 cut(s) 65, 221, 238
BmsI GCATC 3 cut(s) 136, 208, 303
BpuMI CCSGG 1 cut(s) 65
BsaHI GRCGYC 2 cut(s) 24, 159
BsaJI CCNNGG 2 cut(s) 111, 388
BsaWI WCCGGW 1 cut(s) 202
Bsc4I CCNNNNNNNGG 2 cut(s) 195, 237
Bse1I ACTGG 1 cut(s) 281
Bse3DI GCAATG 1 cut(s) 388
BseAI TCCGGA 1 cut(s) 202
BseBI CCWGG 2 cut(s) 221, 238
BseDI CCNNGG 2 cut(s) 111, 388
BseGI GGATG 3 cut(s) 177, 199, 318
BseLI CCNNNNNNNGG 2 cut(s) 195, 237
BseMI GCAATG 1 cut(s) 388
BseMII CTCAG 1 cut(s) 333
BseNI ACTGG 1 cut(s) 281
BseXI GCAGC 1 cut(s) 64
BshFI GGCC 1 cut(s) 387
BsiSI CCGG 2 cut(s) 65, 203
BslFI GGGAC 2 cut(s) 23, 32
BslI CCNNNNNNNGG 2 cut(s) 195, 237
BsmFI GGGAC 2 cut(s) 23, 32
BsmI GAATGC 1 cut(s) 400
BsnI GGCC 1 cut(s) 387
Bsp13I TCCGGA 1 cut(s) 202
Bsp143I GATC 2 cut(s) 97, 277
BspACI CCGC 1 cut(s) 181
BspANI GGCC 1 cut(s) 387
BspCNI CTCAG 1 cut(s) 334
BspEI TCCGGA 1 cut(s) 202
BspPI GGATC 1 cut(s) 272
BsrDI GCAATG 1 cut(s) 388
BsrI ACTGG 1 cut(s) 281
BssECI CCNNGG 2 cut(s) 111, 388
BssMI GATC 2 cut(s) 97, 277
BssNI GRCGYC 2 cut(s) 24, 159
BssT1I CCWWGG 2 cut(s) 111, 388
Bst2UI CCWGG 2 cut(s) 221, 238
Bst4CI ACNGT 1 cut(s) 227
Bst6I CTCTTC 2 cut(s) 281, 286
BstACI GRCGYC 2 cut(s) 24, 159
BstAPI GCANNNNNTGC 1 cut(s) 313
BstDEI CTNAG 1 cut(s) 342
BstF5I GGATG 3 cut(s) 177, 199, 318
BstKTI GATC 2 cut(s) 100, 280
BstMBI GATC 2 cut(s) 97, 277
BstMWI GCNNNNNNNGC 1 cut(s) 313
BstNI CCWGG 2 cut(s) 221, 238
BstNSI RCATGY 1 cut(s) 381
BstSCI CCNGG 3 cut(s) 63, 219, 236
BstV1I GCAGC 1 cut(s) 64
BsuRI GGCC 1 cut(s) 387
BtsCI GGATG 3 cut(s) 177, 199, 318
BtsIMutI CAGTG 2 cut(s) 232, 288
CseI GACGC 2 cut(s) 32, 167
CsiI ACCWGGT 1 cut(s) 236
CviAII CATG 1 cut(s) 378
CviJI RGCY 2 cut(s) 109, 387
CviKI_1 RGCY 2 cut(s) 109, 387
DdeI CTNAG 1 cut(s) 342
DpnI GATC 2 cut(s) 99, 279
DpnII GATC 2 cut(s) 97, 277
Eam1104I CTCTTC 2 cut(s) 281, 286
EarI CTCTTC 2 cut(s) 281, 286
EciI GGCGGA 1 cut(s) 170
Eco130I CCWWGG 2 cut(s) 111, 388
EcoRII CCWGG 2 cut(s) 219, 236
EcoT14I CCWWGG 2 cut(s) 111, 388
ErhI CCWWGG 2 cut(s) 111, 388
FaeI CATG 1 cut(s) 381
FaiI YATR 8 cut(s) 123, 144, 262, 300, 321, 327, 371, 379
FalI AAGNNNNNCTT 2 cut(s) 300, 332
FaqI GGGAC 2 cut(s) 23, 32
FatI CATG 1 cut(s) 377
Fnu4HI GCNGC 1 cut(s) 53
FokI GGATG 3 cut(s) 164, 186, 325
Fsp4HI GCNGC 1 cut(s) 53
GluI GCNGC 1 cut(s) 53
HaeIII GGCC 1 cut(s) 387
HapII CCGG 2 cut(s) 65, 203
HgaI GACGC 2 cut(s) 32, 167
Hin1I GRCGYC 2 cut(s) 24, 159
Hin1II CATG 1 cut(s) 381
HinfI GANTC 1 cut(s) 68
HpaII CCGG 2 cut(s) 65, 203
Hpy188I TCNGA 1 cut(s) 97
Hpy188III TCNNGA 2 cut(s) 203, 245
Hpy99I CGWCG 3 cut(s) 26, 158, 161
HpyCH4III ACNGT 1 cut(s) 227
HpyCH4V TGCA 1 cut(s) 381
HpyF10VI GCNNNNNNNGC 1 cut(s) 313
HpyF3I CTNAG 1 cut(s) 342
Hsp92I GRCGYC 2 cut(s) 24, 159
Hsp92II CATG 1 cut(s) 381
Kpn2I TCCGGA 1 cut(s) 202
Kzo9I GATC 2 cut(s) 97, 277
LmnI GCTCC 1 cut(s) 173
LpnPI CCDG 7 cut(s) 78, 206, 216, 223, 233, 250, 294
Lsp1109I GCAGC 1 cut(s) 64
LweI GCATC 3 cut(s) 136, 208, 303
MabI ACCWGGT 1 cut(s) 236
MaeIII GTNAC 1 cut(s) 337
MalI GATC 2 cut(s) 99, 279
MboI GATC 2 cut(s) 97, 277
MboII GAAGA 3 cut(s) 82, 298, 303
MluCI AATT 3 cut(s) 28, 79, 405
MmeI TCCRAC 1 cut(s) 195
MnlI CCTC 2 cut(s) 194, 250
MroI TCCGGA 1 cut(s) 202
MseI TTAA 1 cut(s) 351
MspI CCGG 2 cut(s) 65, 203
MspR9I CCNGG 3 cut(s) 65, 221, 238
Mva1269I GAATGC 1 cut(s) 400
MvaI CCWGG 2 cut(s) 221, 238
MwoI GCNNNNNNNGC 1 cut(s) 313
NciI CCSGG 1 cut(s) 65
NdeII GATC 2 cut(s) 97, 277
NlaIII CATG 1 cut(s) 381
NspI RCATGY 1 cut(s) 381
PcsI WCGNNNNNNNCGW 1 cut(s) 18
PctI GAATGC 1 cut(s) 400
PfeI GAWTC 1 cut(s) 68
PkrI GCNGC 1 cut(s) 54
Psp6I CCWGG 2 cut(s) 219, 236
PspGI CCWGG 2 cut(s) 219, 236
SaqAI TTAA 1 cut(s) 351
SatI GCNGC 1 cut(s) 53
Sau3AI GATC 2 cut(s) 97, 277
ScrFI CCNGG 3 cut(s) 65, 221, 238
SetI ASST 2 cut(s) 242, 367
SexAI ACCWGGT 1 cut(s) 236
SfaNI GCATC 3 cut(s) 136, 208, 303
Sse9I AATT 3 cut(s) 28, 79, 405
SsiI CCGC 1 cut(s) 181
StyD4I CCNGG 3 cut(s) 63, 219, 236
StyI CCWWGG 2 cut(s) 111, 388
TaaI ACNGT 1 cut(s) 227
TaqI TCGA 1 cut(s) 84
TasI AATT 3 cut(s) 28, 79, 405
TfiI GAWTC 1 cut(s) 68
Tru1I TTAA 1 cut(s) 351
Tru9I TTAA 1 cut(s) 351
TscAI CASTG 2 cut(s) 232, 288
TseI GCWGC 1 cut(s) 52
TspRI CASTG 2 cut(s) 232, 288
XapI RAATTY 1 cut(s) 79
XceI RCATGY 1 cut(s) 381
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.