pycom08g16690

Chaperone protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Reverse (-)
16753372 .. 16755650
2279 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g16690.2

Sequence Viewer

Length: 423 bp
ATGATGTGGGACGAGTGGGGCGACACCATTTTCTCCGACACCGACCAACAACAACAGCAACAACAATCCGACCAGGATTCCCACCTCAATTTCGATTTCTTCTCCGACCTCTCCAAGCCCAAGGATTACTATAAGATACTGGAAGTGGATTATGATGCCAACGACGATGCTATTCGCTCCAACTACATCCGCCTCGCCTTGAAATGGCATCCGGATAAGCACAAGGACCAGGATAGTGCCACCTCTAGGTTTCAAGAGATAAACGAGGCCTATCAAGTTTTGAGTGATCCAGTGAAGAGAGTAGAATATGACAAGAAAGGGATGCTTTACGTCTACGACTATAATATAACTGAGTATCTAAACCGCTACAAAGGTCTTATATTGACGTGCAGTGGCCTGGGGATGAGGACTTCGATTTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

141

Amino Acids

16.75

Weight (kDa)

4.66

Isoelectric Point (pI)

41.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012874)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G33735 AT2G33735
fragaria_vesca FvH4_5g35690
malus_domestica MD08G1194000.v1.1 MD15G1382100.v1.1
prunus_persica Prupe.1G528300_v2.0.a1
pyrus_communis pycom08g16690 pycom15g34210
rosa_chinensis RchiOBHm_Chr7g0237331
rosa_laevigata RLG00000001011
rosa_multiflora Rmu_sc0002923.1_g000039
rosa_roxburghii Rroxscaffold_3G00224310
rosa_rugosa Rorug07G0302800
rosa_samantha Rh7AG459900 Rh7BG429800 Rh7CG477200 Rh7DG446500
rosa_wichuraiana Rw7G038090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 333
AccIII TCCGGA 1 cut(s) 211
AciI CCGC 2 cut(s) 190, 364
AclWI GGATC 1 cut(s) 281
AfiI CCNNNNNNNGG 2 cut(s) 204, 246
AgsI TTSAA 2 cut(s) 202, 254
AjiI CACGTC 1 cut(s) 387
AjnI CCWGG 3 cut(s) 72, 228, 396
AlwI GGATC 1 cut(s) 281
Aor13HI TCCGGA 1 cut(s) 211
AoxI GGCC 2 cut(s) 267, 394
AspS9I GGNCC 1 cut(s) 226
AvaII GGWCC 1 cut(s) 226
BciT130I CCWGG 3 cut(s) 74, 230, 398
BfaI CTAG 1 cut(s) 246
Bme1390I CCNGG 3 cut(s) 74, 230, 398
Bme18I GGWCC 1 cut(s) 226
BmgBI CACGTC 1 cut(s) 387
BmgT120I GGNCC 1 cut(s) 226
BmrFI CCNGG 3 cut(s) 74, 230, 398
BmsI GCATC 4 cut(s) 145, 157, 217, 312
BsaJI CCNNGG 2 cut(s) 120, 397
BsaWI WCCGGW 1 cut(s) 211
Bsc4I CCNNNNNNNGG 2 cut(s) 204, 246
Bse1I ACTGG 2 cut(s) 144, 290
BseAI TCCGGA 1 cut(s) 211
BseBI CCWGG 3 cut(s) 74, 230, 398
BseDI CCNNGG 2 cut(s) 120, 397
BseGI GGATG 4 cut(s) 186, 208, 327, 408
BseLI CCNNNNNNNGG 2 cut(s) 204, 246
BseMII CTCAG 1 cut(s) 342
BseNI ACTGG 2 cut(s) 144, 290
BsgI GTGCAG 1 cut(s) 409
BshFI GGCC 2 cut(s) 269, 396
BsiSI CCGG 1 cut(s) 212
BslFI GGGAC 1 cut(s) 23
BslI CCNNNNNNNGG 2 cut(s) 204, 246
BsmFI GGGAC 1 cut(s) 23
BsnI GGCC 2 cut(s) 269, 396
Bsp13I TCCGGA 1 cut(s) 211
Bsp143I GATC 1 cut(s) 286
BspACI CCGC 2 cut(s) 190, 364
BspANI GGCC 2 cut(s) 269, 396
BspCNI CTCAG 1 cut(s) 343
BspEI TCCGGA 1 cut(s) 211
BspPI GGATC 1 cut(s) 281
BsrI ACTGG 2 cut(s) 144, 290
BssECI CCNNGG 2 cut(s) 120, 397
BssMI GATC 1 cut(s) 286
BssT1I CCWWGG 1 cut(s) 120
Bst2UI CCWGG 3 cut(s) 74, 230, 398
Bst6I CTCTTC 1 cut(s) 290
BstDEI CTNAG 1 cut(s) 351
BstF5I GGATG 4 cut(s) 186, 208, 327, 408
BstKTI GATC 1 cut(s) 289
BstMBI GATC 1 cut(s) 286
BstNI CCWGG 3 cut(s) 74, 230, 398
BstSCI CCNGG 3 cut(s) 72, 228, 396
BsuRI GGCC 2 cut(s) 269, 396
BtrI CACGTC 1 cut(s) 387
BtsCI GGATG 4 cut(s) 186, 208, 327, 408
BtsI GCAGTG 1 cut(s) 397
BtsIMutI CAGTG 2 cut(s) 297, 397
Cfr13I GGNCC 1 cut(s) 226
CviJI RGCY 3 cut(s) 118, 269, 396
CviKI_1 RGCY 3 cut(s) 118, 269, 396
DdeI CTNAG 1 cut(s) 351
DpnI GATC 1 cut(s) 288
DpnII GATC 1 cut(s) 286
Eam1104I CTCTTC 1 cut(s) 290
EarI CTCTTC 1 cut(s) 290
EciI GGCGGA 1 cut(s) 179
Eco130I CCWWGG 1 cut(s) 120
Eco147I AGGCCT 1 cut(s) 269
Eco47I GGWCC 1 cut(s) 226
EcoRII CCWGG 3 cut(s) 72, 228, 396
EcoT14I CCWWGG 1 cut(s) 120
ErhI CCWWGG 1 cut(s) 120
FaiI YATR 6 cut(s) 132, 153, 309, 342, 347, 380
FalI AAGNNNNNCTT 2 cut(s) 309, 341
FaqI GGGAC 1 cut(s) 23
FblI GTMKAC 1 cut(s) 333
FokI GGATG 4 cut(s) 173, 195, 334, 415
FspBI CTAG 1 cut(s) 246
HaeIII GGCC 2 cut(s) 269, 396
HapII CCGG 1 cut(s) 212
HinfI GANTC 1 cut(s) 77
HpaII CCGG 1 cut(s) 212
Hpy166II GTNNAC 1 cut(s) 334
Hpy188I TCNGA 3 cut(s) 37, 70, 106
Hpy188III TCNNGA 2 cut(s) 212, 254
Hpy8I GTNNAC 1 cut(s) 334
Hpy99I CGWCG 1 cut(s) 167
HpyCH4IV ACGT 2 cut(s) 330, 386
HpyCH4V TGCA 1 cut(s) 390
HpyF3I CTNAG 1 cut(s) 351
HpySE526I ACGT 2 cut(s) 330, 386
Kpn2I TCCGGA 1 cut(s) 211
Kzo9I GATC 1 cut(s) 286
LmnI GCTCC 1 cut(s) 182
LpnPI CCDG 9 cut(s) 59, 86, 125, 215, 225, 242, 303, 383, 410
LweI GCATC 4 cut(s) 145, 157, 217, 312
MaeI CTAG 1 cut(s) 246
MaeII ACGT 2 cut(s) 330, 386
MalI GATC 1 cut(s) 288
MboI GATC 1 cut(s) 286
MboII GAAGA 2 cut(s) 91, 307
MluCI AATT 1 cut(s) 88
MmeI TCCRAC 4 cut(s) 60, 93, 129, 204
MnlI CCTC 6 cut(s) 95, 119, 203, 253, 259, 399
MroI TCCGGA 1 cut(s) 211
MspI CCGG 1 cut(s) 212
MspR9I CCNGG 3 cut(s) 74, 230, 398
MvaI CCWGG 3 cut(s) 74, 230, 398
NdeII GATC 1 cut(s) 286
PceI AGGCCT 1 cut(s) 269
PcsI WCGNNNNNNNCGW 1 cut(s) 18
PfeI GAWTC 1 cut(s) 77
Psp6I CCWGG 3 cut(s) 72, 228, 396
PspGI CCWGG 3 cut(s) 72, 228, 396
PspPI GGNCC 1 cut(s) 226
Sau3AI GATC 1 cut(s) 286
Sau96I GGNCC 1 cut(s) 226
ScrFI CCNGG 3 cut(s) 74, 230, 398
SetI ASST 7 cut(s) 87, 111, 245, 251, 333, 376, 389
SfaNI GCATC 4 cut(s) 145, 157, 217, 312
SinI GGWCC 1 cut(s) 226
Sse9I AATT 1 cut(s) 88
SseBI AGGCCT 1 cut(s) 269
SsiI CCGC 2 cut(s) 190, 364
SspMI CTAG 1 cut(s) 246
StuI AGGCCT 1 cut(s) 269
StyD4I CCNGG 3 cut(s) 72, 228, 396
StyI CCWWGG 1 cut(s) 120
TaiI ACGT 2 cut(s) 333, 389
TaqI TCGA 2 cut(s) 93, 413
TasI AATT 1 cut(s) 88
TfiI GAWTC 1 cut(s) 77
TscAI CASTG 2 cut(s) 297, 397
TspRI CASTG 2 cut(s) 297, 397
VpaK11BI GGWCC 1 cut(s) 226
XmiI GTMKAC 1 cut(s) 333
XspI CTAG 1 cut(s) 246
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.