AT2G35150

Phosphate-induced protein 1 conserved region

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0016520
Physical Location & Seq
Reverse (-)
14817047 .. 14818211
1165 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G35150.1

Sequence Viewer

Length: 972 bp
ATGTCTCTCATCATCGTCTTCTTCTTCTTCTCACTCTTGCTCACATCCAATGGACAGTTCTTCGACGAGAGCAAGAACTATGAAGGCTCCTCCGATCTCGTTGACCTTCAATACCACTTGGGTCCGGTCATATCCTCGCCGGTGACGAGTCTCTACATCATTTGGTACGGCCGATGGAACCCAACTCACCAATCTATAATCCGAGACTTTCTCTACTCTGTCTCTGCACCGGCACCGGCTCAGTACCCGTCAGTATCCAACTGGTGGAAGACAGTGAGGCTATACAGAGACCAGACAGGTTCCAACATCACCGACACTCTTGTCTTATCCGGAGAGTTCCACGACTCAACGTACTCTCATGGATCTCATCTCACTCGCTTCTCTGTTCAGTCTGTGATCAGAACTGCCTTGACTTCCAAGTTACCACTAAACGCTGTAAACGGCTTGTACTTAGTCTTGACCTCGGATGATGTAGAGATGCAAGAGTTCTGCAGAGCGATTTGCGGGTTTCATTACTTCACTTTCCCAAGCGTTGTGGGTGCAACCGTACCGTATGCTTGGGTGGGCAACAGTGAGAGACAGTGTCCAGAAATGTGTGCGTACCCATTTGCACAGCCTAAGCCATTTCCGGGGAGCGGGTTTGTAGCCAGAGAGAAGATGAAACCGCCAAATGGAGAGGTAGGAATCGATGGGATGATCAGTGTGATAGCTCATGAGCTGGCAGAAGTGTCGAGTAACCCGATGTTAAACGGATGGTATGGAGGAGAGGACGCGACAGCACCGACAGAGATAGCGGATTTATGTTTGGGAGTGTATGGGTCAGGAGGAGGAGGAGGCTATATGGGAAGTGTGTATAAGGATAGGTGGAGGAATGTGTATAATGTGAAGGGCGTTAAAGGAAGAAAGTATCTAATTCAATGGGTTTGGGATCTTAATAGGAACAGATGCTTTGGACCAAACGCTATGAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Phi_1

Protein Analysis

323

Amino Acids

36.03

Weight (kDa)

6.16

Isoelectric Point (pI)

36.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Phi_1 PF04674 36 - 318 1.9e-100 Phosphate-induced protein 1 conserved region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016520)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G35150
fragaria_vesca FvH4_3g12280
malus_domestica MD10G1232600.v1.1
prunus_persica Prupe.4G111900_v2.0.a1
rosa_chinensis RchiOBHm_Chr5g0020091
rosa_laevigata RLG00000032498
rosa_multiflora Rmu_sc0009586.1_g000003
rosa_roxburghii Rroxscaffold_1G00058110
rosa_rugosa Rorug05G0056800
rosa_samantha Rh5AG147000 Rh5BG146400 Rh5CG158100 Rh5DG146000
rosa_wichuraiana Rw5G012990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 320
AccB1I GGYRCC 1 cut(s) 232
AccB7I CCANNNNNTGG 1 cut(s) 264
AccBSI CCGCTC 1 cut(s) 636
AccII CGCG 1 cut(s) 773
AccIII TCCGGA 1 cut(s) 329
AciI CCGC 4 cut(s) 504, 636, 665, 794
AclWI GGATC 2 cut(s) 370, 936
AcoI YGGCCR 1 cut(s) 169
AfaI GTAC 6 cut(s) 167, 245, 353, 449, 549, 602
AfiI CCNNNNNNNGG 4 cut(s) 264, 629, 635, 671
AgsI TTSAA 2 cut(s) 110, 917
AjuI GAANNNNNNNTTGG 2 cut(s) 41, 73
AluBI AGCT 2 cut(s) 710, 718
AluI AGCT 2 cut(s) 710, 718
Alw26I GTCTC 6 cut(s) 9, 155, 198, 226, 282, 571
AlwI GGATC 2 cut(s) 370, 936
Aor13HI TCCGGA 1 cut(s) 329
AoxI GGCC 1 cut(s) 169
AspS9I GGNCC 2 cut(s) 122, 953
AsuC2I CCSGG 1 cut(s) 630
AsuHPI GGTGA 3 cut(s) 154, 179, 301
AvaII GGWCC 2 cut(s) 122, 953
BanI GGYRCC 1 cut(s) 232
BbsI GAAGAC 2 cut(s) 10, 275
BccI CCATC 3 cut(s) 168, 683, 747
BceAI ACGGC 2 cut(s) 184, 457
BcgI CGANNNNNNTGC 2 cut(s) 711, 745
BciVI GTATCC 1 cut(s) 265
BclI TGATCA 2 cut(s) 396, 696
BcnI CCSGG 1 cut(s) 630
BcoDI GTCTC 6 cut(s) 9, 155, 198, 226, 282, 571
BfmI CTRYAG 1 cut(s) 490
BfuI GTATCC 1 cut(s) 265
Bme1390I CCNGG 1 cut(s) 630
Bme18I GGWCC 2 cut(s) 122, 953
BmgT120I GGNCC 2 cut(s) 122, 953
BmiI GGNNCC 5 cut(s) 88, 123, 179, 234, 301
BmrFI CCNGG 1 cut(s) 630
BmsI GCATC 2 cut(s) 468, 935
BpiI GAAGAC 2 cut(s) 10, 275
BplI GAGNNNNNCTC 2 cut(s) 195, 227
Bpu10I CCTNAGC 1 cut(s) 618
BpuMI CCSGG 1 cut(s) 630
Bsa29I ATCGAT 1 cut(s) 687
BsaI GGTCTC 1 cut(s) 282
BsaJI CCNNGG 2 cut(s) 462, 629
BsaWI WCCGGW 2 cut(s) 124, 329
Bsc4I CCNNNNNNNGG 4 cut(s) 264, 629, 635, 671
Bse118I RCCGGY 3 cut(s) 139, 229, 235
Bse1I ACTGG 1 cut(s) 266
BseAI TCCGGA 1 cut(s) 329
BseCI ATCGAT 1 cut(s) 687
BseDI CCNNGG 2 cut(s) 462, 629
BseGI GGATG 4 cut(s) 44, 472, 699, 758
BseLI CCNNNNNNNGG 4 cut(s) 264, 629, 635, 671
BseMII CTCAG 1 cut(s) 254
BseNI ACTGG 1 cut(s) 266
BseRI GAGGAG 5 cut(s) 79, 777, 840, 843, 846
BseX3I CGGCCG 1 cut(s) 169
BsgI GTGCAG 1 cut(s) 210
Bsh1236I CGCG 1 cut(s) 773
Bsh1285I CGRYCG 1 cut(s) 172
BshFI GGCC 1 cut(s) 171
BshNI GGYRCC 1 cut(s) 232
BshVI ATCGAT 1 cut(s) 687
BsiEI CGRYCG 1 cut(s) 172
BsiSI CCGG 6 cut(s) 125, 140, 230, 236, 330, 629
BslI CCNNNNNNNGG 4 cut(s) 264, 629, 635, 671
BsmAI GTCTC 6 cut(s) 9, 155, 198, 226, 282, 571
BsnI GGCC 1 cut(s) 171
Bso31I GGTCTC 1 cut(s) 282
Bsp13I TCCGGA 1 cut(s) 329
Bsp143I GATC 5 cut(s) 94, 362, 396, 696, 928
BspACI CCGC 4 cut(s) 504, 636, 665, 794
BspANI GGCC 1 cut(s) 171
BspCNI CTCAG 1 cut(s) 253
BspDI ATCGAT 1 cut(s) 687
BspEI TCCGGA 1 cut(s) 329
BspFNI CGCG 1 cut(s) 773
BspHI TCATGA 1 cut(s) 712
BspLI GGNNCC 5 cut(s) 88, 123, 179, 234, 301
BspMAI CTGCAG 1 cut(s) 494
BspPI GGATC 2 cut(s) 370, 936
BspT107I GGYRCC 1 cut(s) 232
BspTNI GGTCTC 1 cut(s) 282
BsrBI CCGCTC 1 cut(s) 636
BsrFI RCCGGY 3 cut(s) 139, 229, 235
BsrI ACTGG 1 cut(s) 266
BssAI RCCGGY 3 cut(s) 139, 229, 235
BssECI CCNNGG 2 cut(s) 462, 629
BssMI GATC 5 cut(s) 94, 362, 396, 696, 928
Bst4CI ACNGT 6 cut(s) 57, 274, 547, 552, 572, 582
BstC8I GCNNGC 1 cut(s) 720
BstDEI CTNAG 3 cut(s) 240, 451, 618
BstF5I GGATG 4 cut(s) 44, 472, 699, 758
BstFNI CGCG 1 cut(s) 773
BstKTI GATC 5 cut(s) 97, 365, 399, 699, 931
BstMAI GTCTC 6 cut(s) 9, 155, 198, 226, 282, 571
BstMBI GATC 5 cut(s) 94, 362, 396, 696, 928
BstMCI CGRYCG 1 cut(s) 172
BstSCI CCNGG 1 cut(s) 628
BstSFI CTRYAG 1 cut(s) 490
BstUI CGCG 1 cut(s) 773
BstV2I GAAGAC 2 cut(s) 10, 275
BstX2I RGATCY 2 cut(s) 362, 928
BstYI RGATCY 2 cut(s) 362, 928
BstZI CGGCCG 1 cut(s) 169
Bsu15I ATCGAT 1 cut(s) 687
BsuI GTATCC 1 cut(s) 265
BsuRI GGCC 1 cut(s) 171
BsuTUI ATCGAT 1 cut(s) 687
BtsCI GGATG 4 cut(s) 44, 472, 699, 758
BtsIMutI CAGTG 4 cut(s) 279, 577, 587, 706
Cac8I GCNNGC 1 cut(s) 720
CciI TCATGA 1 cut(s) 712
Cfr10I RCCGGY 3 cut(s) 139, 229, 235
Cfr13I GGNCC 2 cut(s) 122, 953
ClaI ATCGAT 1 cut(s) 687
CseI GACGC 1 cut(s) 779
Csp6I GTAC 6 cut(s) 166, 244, 352, 448, 548, 601
CspCI CAANNNNNGTGG 2 cut(s) 516, 551
CviAII CATG 2 cut(s) 359, 713
CviQI GTAC 6 cut(s) 166, 244, 352, 448, 548, 601
DdeI CTNAG 3 cut(s) 240, 451, 618
DpnI GATC 5 cut(s) 96, 364, 398, 698, 930
DpnII GATC 5 cut(s) 94, 362, 396, 696, 928
DrdI GACNNNNNNGTC 1 cut(s) 320
DseDI GACNNNNNNGTC 1 cut(s) 320
EaeI YGGCCR 1 cut(s) 169
EagI CGGCCG 1 cut(s) 169
EclXI CGGCCG 1 cut(s) 169
Eco31I GGTCTC 1 cut(s) 282
Eco47I GGWCC 2 cut(s) 122, 953
Eco52I CGGCCG 1 cut(s) 169
FaeI CATG 2 cut(s) 362, 716
FatI CATG 2 cut(s) 358, 712
FauI CCCGC 2 cut(s) 497, 629
FbaI TGATCA 2 cut(s) 396, 696
FokI GGATG 4 cut(s) 31, 479, 706, 765
HaeIII GGCC 1 cut(s) 171
HapII CCGG 6 cut(s) 125, 140, 230, 236, 330, 629
HgaI GACGC 1 cut(s) 779
Hin1II CATG 2 cut(s) 362, 716
HincII GTYRAC 1 cut(s) 103
HindII GTYRAC 1 cut(s) 103
HinfI GANTC 3 cut(s) 148, 344, 684
HpaII CCGG 6 cut(s) 125, 140, 230, 236, 330, 629
HphI GGTGA 3 cut(s) 154, 179, 301
Hpy166II GTNNAC 2 cut(s) 103, 439
Hpy188I TCNGA 4 cut(s) 94, 203, 401, 466
Hpy188III TCNNGA 5 cut(s) 330, 457, 587, 713, 822
Hpy8I GTNNAC 2 cut(s) 103, 439
Hpy99I CGWCG 1 cut(s) 68
HpyAV CCTTC 3 cut(s) 77, 116, 880
HpyCH4III ACNGT 6 cut(s) 57, 274, 547, 552, 572, 582
HpyCH4IV ACGT 1 cut(s) 350
HpyCH4V TGCA 5 cut(s) 227, 481, 492, 542, 611
HpyF3I CTNAG 3 cut(s) 240, 451, 618
HpySE526I ACGT 1 cut(s) 350
Hsp92II CATG 2 cut(s) 362, 716
Kpn2I TCCGGA 1 cut(s) 329
Ksp22I TGATCA 2 cut(s) 396, 696
Kzo9I GATC 5 cut(s) 94, 362, 396, 696, 928
LmnI GCTCC 2 cut(s) 92, 633
LweI GCATC 2 cut(s) 468, 935
MaeII ACGT 1 cut(s) 350
MaeIII GTNAC 3 cut(s) 142, 420, 734
MalI GATC 5 cut(s) 96, 364, 398, 698, 930
MbiI CCGCTC 1 cut(s) 636
MboI GATC 5 cut(s) 94, 362, 396, 696, 928
MboII GAAGA 8 cut(s) 10, 13, 16, 19, 52, 280, 667, 912
MflI RGATCY 2 cut(s) 362, 928
MluCI AATT 2 cut(s) 912, 967
MlyI GAGTC 2 cut(s) 157, 338
MmeI TCCRAC 2 cut(s) 282, 327
MroI TCCGGA 1 cut(s) 329
MseI TTAA 3 cut(s) 746, 894, 933
MspI CCGG 6 cut(s) 125, 140, 230, 236, 330, 629
MspR9I CCNGG 1 cut(s) 630
MvnI CGCG 1 cut(s) 773
NciI CCSGG 1 cut(s) 630
NdeII GATC 5 cut(s) 94, 362, 396, 696, 928
NlaIII CATG 2 cut(s) 362, 716
NlaIV GGNNCC 5 cut(s) 88, 123, 179, 234, 301
NmuCI GTSAC 1 cut(s) 142
PagI TCATGA 1 cut(s) 712
PcsI WCGNNNNNNNCGW 2 cut(s) 143, 737
PfeI GAWTC 1 cut(s) 684
PflFI GACNNNGTC 1 cut(s) 582
PflMI CCANNNNNTGG 1 cut(s) 264
PleI GAGTC 2 cut(s) 156, 338
PpsI GAGTC 2 cut(s) 156, 338
PspN4I GGNNCC 5 cut(s) 88, 123, 179, 234, 301
PspPI GGNCC 2 cut(s) 122, 953
PstI CTGCAG 1 cut(s) 494
PsuI RGATCY 2 cut(s) 362, 928
PsyI GACNNNGTC 1 cut(s) 582
RsaI GTAC 6 cut(s) 167, 245, 353, 449, 549, 602
RsaNI GTAC 6 cut(s) 166, 244, 352, 448, 548, 601
SaqAI TTAA 3 cut(s) 746, 894, 933
Sau3AI GATC 5 cut(s) 94, 362, 396, 696, 928
Sau96I GGNCC 2 cut(s) 122, 953
SchI GAGTC 2 cut(s) 157, 338
ScrFI CCNGG 1 cut(s) 630
SetI ASST 8 cut(s) 108, 301, 353, 464, 681, 712, 720, 866
SfaNI GCATC 2 cut(s) 468, 935
SfcI CTRYAG 1 cut(s) 490
SgrAI CRCCGGYG 1 cut(s) 139
SinI GGWCC 2 cut(s) 122, 953
Sse9I AATT 2 cut(s) 912, 967
SsiI CCGC 4 cut(s) 504, 636, 665, 794
StyD4I CCNGG 1 cut(s) 628
TaaI ACNGT 6 cut(s) 57, 274, 547, 552, 572, 582
TaiI ACGT 1 cut(s) 353
TaqI TCGA 3 cut(s) 63, 687, 731
TasI AATT 2 cut(s) 912, 967
TatI WGTACW 1 cut(s) 447
TfiI GAWTC 1 cut(s) 684
Tru1I TTAA 3 cut(s) 746, 894, 933
Tru9I TTAA 3 cut(s) 746, 894, 933
TscAI CASTG 4 cut(s) 279, 577, 587, 706
TseFI GTSAC 1 cut(s) 142
Tsp45I GTSAC 1 cut(s) 142
TspDTI ATGAA 3 cut(s) 96, 500, 674
TspGWI ACGGA 1 cut(s) 765
TspRI CASTG 4 cut(s) 279, 577, 587, 706
Tth111I GACNNNGTC 1 cut(s) 582
Van91I CCANNNNNTGG 1 cut(s) 264
VpaK11BI GGWCC 2 cut(s) 122, 953
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.