Rorug05G0056800

Phosphate-induced protein 1 conserved region

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0016520
Physical Location & Seq
Reverse (-)
4970715 .. 4977598
6884 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0056800.1

Sequence Viewer

Length: 2055 bp
ATGCCTCAGGTGAGGATCATAGCGAAGAACTTCATGGACATGGTGGCTGCCTTGCCCGCCATGAAGCTCGATAAGCTCTACGACAACTCATTCATCTGCGAAGCCATTCTCAGGTCTCTGCCACCACTGGCCAAGAAATATGTTTTGCAAATGCTATGCGTCGAGCTTCCGGTCAATTCCAAGTCAATGGAGGAGTGGGTGCTCCCCGATGGGGCCTCCAAGCATCGAGTGGCGATTGATCGATTGGTTCAATTGAGAATATTCACCGAGACCAAGAAGAAGGGGGATGTTACATACACATTGAATCCTATATTTCAGACTAATCTCAAGAAGCTTCTCGTATACGGTGTAGTTTTGCCAAGAGAACCAATGCCTTCGAGTGTCACAGTGAGGCGCCCAAGCTCGGAGGAACTTGAGGCTTTTGCTCTAGAACAATGGGAGTGTTTCTTGCTGCAACTTATCAACTCATCTCAAACTGAAAGGCCATCAAACATCAGTTCGTCTATGATGAAAACTTTCCAGCGGGGTCTTGTGACTCAAAGAGATAGAGAAGCTCCTAGGTTAACTGAAAGTGGTTTCCAGTTCTTGCTGATGGATACAAATGCACAACTTTGGTACATCATCAGAGAATATATCACTAGCTCGGAGGAGCGCGGGATCGATTCGGCAGATTTGATTTCATTCCTGCTAGAGCTAAGTTTTCATGTTACAGGCGAGGCATATAACATAAATACATTGACTGAGGTTCAGAAAAATACGATCAAGGACTTCACAGATTTGGGATTGGTCAAACTTCAGCAGGGTAGGAAAGAGAGTTGGTTTATACCTACTAAATTAGCTACTAATCTTTCGGTGAGCTTGACAGACACATCATCAAGGAAACAGGGATTTGTGGTTGTGGAAACAAACTTTAGGCTCTATGCATACTCATCATCAAAATTGCATTGTGAAATTTTGCGTCTTTTCGCAAGGATAGAATATCAACTTCCGAACCTTATAGTTGGAGCAATAACAAAAGAAAGTCTGTATGGTGCTTTTGACAATTGCATCACTGCAGAACAGATAATTTCTTTTCTTCAACAAAATGCACATCCACGTGTTGCAGAGAGAATACCATCTGTACCTGAGAATGTCACGGATCAGATCAGGCTCTGGGAAACTGATTTAAACAGAGTTGAGATGACTACTGCATATTATTACGATGAATTTCCATCCAGGGATCTCTTTGACGGTGCTGTTGACTATGCGAGAAGCTATAATGGTTTGCTATGGGAGGCTCCAGATGATTCAAAAAAGATGCGTTTGGTGGTCAGGGCTGAAAACCACGTGCACATGCGAGAATATCTTTCCGGTCAAAAAAGATTGGTAGTCACTTCAATGGCGAAAATCGCAAGAGTCCTTCTGCAGTCACTGCTTAAAGCAATGAATTCGATTTTGGGACTGCTTGGAATTGCATTGATTCTCTATGGTCTTTGGATGGTTAGAGTTTGGGAGAGGGACATGGATAGCTCATCATCCTTTGATCAATATACTACTGCTCCCTGGGTTATATGCACTTTTATTGGGGCTGGTGTTACCTTGTGCATAATAACAGGCATAGGTCATCTTGCTGCAAACTGTGGCAGTGGTTGTTGCCTCTCTTGTTATGCTTTGATTATCTGTATGCTTCTTCTATTGGAGACTGCAATGGCTGCAGATATACTCTTAAATTCTGACTGGGAGAAGGATCTCCCCTATGACCCTACTGGAAAGTTCAATGATTTCAGAGATTTTGTGGAGTCAAACTTCGACATGTTCAAGTGGATAGGCTTGCTGATCATCTTAGCTCAGGGTTTTTCGATCTTATTGGCCACGGCTTTAAGGTCGATAGGGCCAGAGCAAGTATCAAACTGTGACAGTGATGAAGAGTATGCCCCAGAAAGAGTCCCACTCATGAACCATATCGTTCAGCCACCAGAATACATTGTTGGTGCCAAGAATAGCATTGAACAAGTGAGGAGAGGTAGAGATCCAAGCTTTGCAAATGAAACTTCAGAAGCTAATTCCGCGGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Phi_1

Protein Analysis

684

Amino Acids

77.48

Weight (kDa)

5.43

Isoelectric Point (pI)

43.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Tfb2 PF03849 14 - 365 1.1e-113 Transcription factor Tfb2
Tfb2_C PF18307 380 - 449 5.2e-20 Transcription factor Tfb2 (p52) C-terminal domain
Tetraspanin PF00335 471 - 572 1.7e-10 Tetraspanin family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016520)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G35150
fragaria_vesca FvH4_3g12280
malus_domestica MD10G1232600.v1.1
prunus_persica Prupe.4G111900_v2.0.a1
rosa_chinensis RchiOBHm_Chr5g0020091
rosa_laevigata RLG00000032498
rosa_multiflora Rmu_sc0009586.1_g000003
rosa_roxburghii Rroxscaffold_1G00058110
rosa_rugosa Rorug05G0056800
rosa_samantha Rh5AG147000 Rh5BG146400 Rh5CG158100 Rh5DG146000
rosa_wichuraiana Rw5G012990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 393, 1970
AccI GTMKAC 1 cut(s) 342
AccII CGCG 2 cut(s) 654, 2048
AciI CCGC 5 cut(s) 57, 523, 654, 2046, 2048
AclWI GGATC 6 cut(s) 23, 665, 1146, 1227, 1734, 2003
AcoI YGGCCR 2 cut(s) 129, 1848
AcsI RAATTY 4 cut(s) 951, 1205, 1426, 1708
AcuI CTGAAG 2 cut(s) 779, 2016
AcvI CACGTG 2 cut(s) 1097, 1327
AcyI GRCGYC 1 cut(s) 394
AfaI GTAC 2 cut(s) 617, 1122
AfiI CCNNNNNNNGG 3 cut(s) 111, 211, 403
AflIII ACRYGT 2 cut(s) 1096, 1791
AgsI TTSAA 8 cut(s) 251, 304, 1079, 1290, 1377, 1756, 1798, 1988
AjnI CCWGG 2 cut(s) 1214, 1541
AjuI GAANNNNNNNTTGG 4 cut(s) 1418, 1450, 1950, 1982
Alw21I GWGCWC 2 cut(s) 204, 1332
Alw26I GTCTC 3 cut(s) 120, 263, 1673
Alw44I GTGCAC 1 cut(s) 1328
AlwI GGATC 6 cut(s) 23, 665, 1146, 1227, 1734, 2003
AlwNI CAGNNNCTG 2 cut(s) 1152, 1411
AoxI GGCC 5 cut(s) 129, 213, 482, 1848, 1871
ApaLI GTGCAC 1 cut(s) 1328
ApeKI GCWGC 4 cut(s) 47, 451, 1610, 1691
ApoI RAATTY 4 cut(s) 951, 1205, 1426, 1708
Asp700I GAANNNNTTC 3 cut(s) 29, 105, 515
AspA2I CCTAGG 1 cut(s) 557
AspLEI GCGC 2 cut(s) 396, 654
AspS9I GGNCC 2 cut(s) 213, 1871
AsuHPI GGTGA 3 cut(s) 22, 256, 865
AvrII CCTAGG 1 cut(s) 557
AxyI CCTNAGG 1 cut(s) 6
BaeGI GKGCMC 1 cut(s) 1332
BalI TGGCCA 2 cut(s) 131, 1850
BanI GGYRCC 2 cut(s) 393, 1970
BbrPI CACGTG 2 cut(s) 1097, 1327
Bbv12I GWGCWC 2 cut(s) 204, 1332
BbvI GCAGC 4 cut(s) 34, 438, 1597, 1678
BccI CCATC 6 cut(s) 203, 493, 586, 1123, 1219, 1471
BceAI ACGGC 1 cut(s) 1869
BcgI CGANNNNNNTGC 2 cut(s) 1410, 1444
BciT130I CCWGG 2 cut(s) 1216, 1543
BciVI GTATCC 1 cut(s) 589
BclI TGATCA 2 cut(s) 1522, 1815
BcoDI GTCTC 3 cut(s) 120, 263, 1673
BfaI CTAG 4 cut(s) 428, 558, 639, 689
BfmI CTRYAG 3 cut(s) 1053, 1403, 1692
BfoI RGCGCY 1 cut(s) 397
BfuI GTATCC 1 cut(s) 589
BisI GCNGC 5 cut(s) 48, 452, 1611, 1692, 2049
BlnI CCTAGG 1 cut(s) 557
BlsI GCNGC 5 cut(s) 49, 453, 1612, 1693, 2050
Bme1390I CCNGG 2 cut(s) 1216, 1543
BmgT120I GGNCC 2 cut(s) 213, 1871
BmiI GGNNCC 4 cut(s) 214, 395, 1278, 1972
BmrFI CCNGG 2 cut(s) 1216, 1543
BmrI ACTGGG 1 cut(s) 1726
BmsI GCATC 3 cut(s) 232, 1056, 1287
BmuI ACTGGG 1 cut(s) 1726
BplI GAGNNNNNCTC 2 cut(s) 1914, 1946
BpmI CTGGAG 1 cut(s) 1263
Bpu10I CCTNAGC 1 cut(s) 1827
BpuEI CTTGAG 2 cut(s) 311, 434
Bsa29I ATCGAT 2 cut(s) 241, 660
BsaAI YACGTR 2 cut(s) 1097, 1327
BsaHI GRCGYC 1 cut(s) 394
BsaI GGTCTC 2 cut(s) 120, 263
BsaJI CCNNGG 6 cut(s) 557, 1215, 1541, 1542, 1851, 2046
BsaWI WCCGGW 2 cut(s) 169, 1349
BsaXI ACNNNNNCTCC 2 cut(s) 1522, 1552
Bsc4I CCNNNNNNNGG 3 cut(s) 111, 211, 403
Bse1I ACTGG 4 cut(s) 132, 580, 1721, 1750
Bse21I CCTNAGG 1 cut(s) 6
Bse3DI GCAATG 2 cut(s) 1428, 1692
BseBI CCWGG 2 cut(s) 1216, 1543
BseCI ATCGAT 2 cut(s) 241, 660
BseDI CCNNGG 6 cut(s) 557, 1215, 1541, 1542, 1851, 2046
BseGI GGATG 5 cut(s) 292, 1090, 1211, 1482, 1514
BseLI CCNNNNNNNGG 3 cut(s) 111, 211, 403
BseMI GCAATG 2 cut(s) 1428, 1692
BseMII CTCAG 5 cut(s) 20, 124, 732, 1116, 1841
BseNI ACTGG 4 cut(s) 132, 580, 1721, 1750
BseRI GAGGAG 3 cut(s) 206, 662, 2011
BseSI GKGCMC 1 cut(s) 1332
BseXI GCAGC 4 cut(s) 34, 438, 1597, 1678
Bsh1236I CGCG 2 cut(s) 654, 2048
BshFI GGCC 5 cut(s) 131, 215, 484, 1850, 1873
BshNI GGYRCC 2 cut(s) 393, 1970
BshVI ATCGAT 2 cut(s) 241, 660
BsiHKAI GWGCWC 2 cut(s) 204, 1332
BsiSI CCGG 2 cut(s) 170, 1350
BslFI GGGAC 3 cut(s) 1452, 1511, 1910
BslI CCNNNNNNNGG 3 cut(s) 111, 211, 403
BsmAI GTCTC 3 cut(s) 120, 263, 1673
BsmFI GGGAC 3 cut(s) 1452, 1511, 1910
BsnI GGCC 5 cut(s) 131, 215, 484, 1850, 1873
Bso31I GGTCTC 2 cut(s) 120, 263
Bsp1286I GDGCHC 2 cut(s) 204, 1332
BspACI CCGC 5 cut(s) 57, 523, 654, 2046, 2048
BspANI GGCC 5 cut(s) 131, 215, 484, 1850, 1873
BspCNI CTCAG 5 cut(s) 19, 123, 733, 1117, 1840
BspDI ATCGAT 2 cut(s) 241, 660
BspFNI CGCG 2 cut(s) 654, 2048
BspHI TCATGA 1 cut(s) 1932
BspLI GGNNCC 4 cut(s) 214, 395, 1278, 1972
BspMAI CTGCAG 3 cut(s) 1057, 1407, 1696
BspPI GGATC 6 cut(s) 23, 665, 1146, 1227, 1734, 2003
BspT107I GGYRCC 2 cut(s) 393, 1970
BspTNI GGTCTC 2 cut(s) 120, 263
BsrDI GCAATG 2 cut(s) 1428, 1692
BsrI ACTGG 4 cut(s) 132, 580, 1721, 1750
BssECI CCNNGG 6 cut(s) 557, 1215, 1541, 1542, 1851, 2046
BssNAI GTATAC 1 cut(s) 343
BssNI GRCGYC 1 cut(s) 394
BssT1I CCWWGG 1 cut(s) 557
Bst1107I GTATAC 1 cut(s) 343
Bst2UI CCWGG 2 cut(s) 1216, 1543
Bst4CI ACNGT 6 cut(s) 347, 388, 1232, 1619, 1892, 1898
Bst6I CTCTTC 1 cut(s) 1899
BstACI GRCGYC 1 cut(s) 394
BstAPI GCANNNNNTGC 2 cut(s) 1411, 1691
BstBAI YACGTR 2 cut(s) 1097, 1327
BstC8I GCNNGC 2 cut(s) 57, 1811
BstDEI CTNAG 7 cut(s) 6, 110, 695, 741, 1125, 1822, 1827
BstDSI CCRYGG 2 cut(s) 1851, 2046
BstF5I GGATG 5 cut(s) 292, 1090, 1211, 1482, 1514
BstFNI CGCG 2 cut(s) 654, 2048
BstH2I RGCGCY 1 cut(s) 397
BstHHI GCGC 2 cut(s) 396, 654
BstMAI GTCTC 3 cut(s) 120, 263, 1673
BstMWI GCNNNNNNNGC 6 cut(s) 56, 73, 1388, 1411, 1691, 2045
BstNI CCWGG 2 cut(s) 1216, 1543
BstNSI RCATGY 2 cut(s) 1336, 1795
BstSCI CCNGG 2 cut(s) 1214, 1541
BstSFI CTRYAG 3 cut(s) 1053, 1403, 1692
BstSLI GKGCMC 1 cut(s) 1332
BstUI CGCG 2 cut(s) 654, 2048
BstV1I GCAGC 4 cut(s) 34, 438, 1597, 1678
BstX2I RGATCY 3 cut(s) 1219, 1726, 2008
BstXI CCANNNNNNTGG 1 cut(s) 187
BstYI RGATCY 3 cut(s) 1219, 1726, 2008
BstZ17I GTATAC 1 cut(s) 343
Bsu15I ATCGAT 2 cut(s) 241, 660
Bsu36I CCTNAGG 1 cut(s) 6
BsuI GTATCC 1 cut(s) 589
BsuRI GGCC 5 cut(s) 131, 215, 484, 1850, 1873
BsuTUI ATCGAT 2 cut(s) 241, 660
BtgI CCRYGG 2 cut(s) 1851, 2046
BtsCI GGATG 5 cut(s) 292, 1090, 1211, 1482, 1514
BtsI GCAGTG 3 cut(s) 1050, 1409, 1630
BtsIMutI CAGTG 6 cut(s) 125, 393, 1050, 1409, 1630, 1903
Cac8I GCNNGC 2 cut(s) 57, 1811
CaiI CAGNNNCTG 2 cut(s) 1152, 1411
CciI TCATGA 1 cut(s) 1932
CfoI GCGC 2 cut(s) 396, 654
Cfr13I GGNCC 2 cut(s) 213, 1871
Cfr42I CCGCGG 1 cut(s) 2049
ClaI ATCGAT 2 cut(s) 241, 660
CseI GACGC 2 cut(s) 148, 947
Csp6I GTAC 2 cut(s) 616, 1121
CviAII CATG 8 cut(s) 34, 40, 61, 704, 1333, 1501, 1792, 1933
CviQI GTAC 2 cut(s) 616, 1121
DdeI CTNAG 7 cut(s) 6, 110, 695, 741, 1125, 1822, 1827
DinI GGCGCC 1 cut(s) 395
DraI TTTAAA 1 cut(s) 1167
EaeI YGGCCR 2 cut(s) 129, 1848
Eam1104I CTCTTC 1 cut(s) 1899
EarI CTCTTC 1 cut(s) 1899
Eco130I CCWWGG 1 cut(s) 557
Eco31I GGTCTC 2 cut(s) 120, 263
Eco57I CTGAAG 2 cut(s) 779, 2016
Eco72I CACGTG 2 cut(s) 1097, 1327
Eco81I CCTNAGG 1 cut(s) 6
EcoO109I RGGNCCY 1 cut(s) 213
EcoRI GAATTC 1 cut(s) 1426
EcoRII CCWGG 2 cut(s) 1214, 1541
EcoT14I CCWWGG 1 cut(s) 557
EcoT22I ATGCAT 1 cut(s) 925
EgeI GGCGCC 1 cut(s) 395
EheI GGCGCC 1 cut(s) 395
ErhI CCWWGG 1 cut(s) 557
FaeI CATG 8 cut(s) 37, 43, 64, 707, 1336, 1504, 1795, 1936
FaqI GGGAC 3 cut(s) 1452, 1511, 1910
FatI CATG 8 cut(s) 33, 39, 60, 703, 1332, 1500, 1791, 1932
FauI CCCGC 3 cut(s) 64, 516, 647
FbaI TGATCA 2 cut(s) 1522, 1815
FblI GTMKAC 1 cut(s) 342
Fnu4HI GCNGC 5 cut(s) 48, 452, 1611, 1692, 2049
FokI GGATG 5 cut(s) 299, 1077, 1198, 1489, 1501
Fsp4HI GCNGC 5 cut(s) 48, 452, 1611, 1692, 2049
FspBI CTAG 4 cut(s) 428, 558, 639, 689
GlaI GCGC 2 cut(s) 395, 653
GluI GCNGC 5 cut(s) 48, 452, 1611, 1692, 2049
GsuI CTGGAG 1 cut(s) 1263
HaeII RGCGCY 1 cut(s) 397
HaeIII GGCC 5 cut(s) 131, 215, 484, 1850, 1873
HapII CCGG 2 cut(s) 170, 1350
HgaI GACGC 2 cut(s) 148, 947
HhaI GCGC 2 cut(s) 396, 654
Hin1I GRCGYC 1 cut(s) 394
Hin1II CATG 8 cut(s) 37, 43, 64, 707, 1336, 1504, 1795, 1936
Hin6I GCGC 2 cut(s) 394, 652
HinP1I GCGC 2 cut(s) 394, 652
HincII GTYRAC 2 cut(s) 564, 1240
HindII GTYRAC 2 cut(s) 564, 1240
HindIII AAGCTT 2 cut(s) 332, 2014
HinfI GANTC 8 cut(s) 304, 535, 662, 1286, 1395, 1459, 1778, 1923
HpaI GTTAAC 1 cut(s) 564
HpaII CCGG 2 cut(s) 170, 1350
HphI GGTGA 3 cut(s) 22, 256, 865
Hpy166II GTNNAC 4 cut(s) 343, 564, 1240, 1330
Hpy188III TCNNGA 4 cut(s) 328, 428, 1280, 1933
Hpy8I GTNNAC 4 cut(s) 343, 564, 1240, 1330
Hpy99I CGWCG 1 cut(s) 164
HpyAV CCTTC 4 cut(s) 274, 384, 1409, 1717
HpyCH4III ACNGT 6 cut(s) 347, 388, 1232, 1619, 1892, 1898
HpyCH4IV ACGT 2 cut(s) 1096, 1326
HpyF10VI GCNNNNNNNGC 6 cut(s) 56, 73, 1388, 1411, 1691, 2045
HpyF3I CTNAG 7 cut(s) 6, 110, 695, 741, 1125, 1822, 1827
HpySE526I ACGT 2 cut(s) 1096, 1326
Hsp92I GRCGYC 1 cut(s) 394
Hsp92II CATG 8 cut(s) 37, 43, 64, 707, 1336, 1504, 1795, 1936
HspAI GCGC 2 cut(s) 394, 652
KasI GGCGCC 1 cut(s) 393
Ksp22I TGATCA 2 cut(s) 1522, 1815
KspAI GTTAAC 1 cut(s) 564
KspI CCGCGG 1 cut(s) 2049
LmnI GCTCC 6 cut(s) 207, 559, 649, 1004, 1282, 1543
Lsp1109I GCAGC 4 cut(s) 34, 438, 1597, 1678
LweI GCATC 3 cut(s) 232, 1056, 1287
MaeI CTAG 4 cut(s) 428, 558, 639, 689
MaeII ACGT 2 cut(s) 1096, 1326
MaeIII GTNAC 9 cut(s) 289, 382, 532, 706, 1132, 1369, 1407, 1573, 1892
MboII GAAGA 5 cut(s) 37, 289, 1067, 1661, 1916
MfeI CAATTG 2 cut(s) 251, 1042
MflI RGATCY 3 cut(s) 1219, 1726, 2008
MhlI GDGCHC 2 cut(s) 204, 1332
MlsI TGGCCA 2 cut(s) 131, 1850
MluNI TGGCCA 2 cut(s) 131, 1850
Mly113I GGCGCC 1 cut(s) 394
MlyI GAGTC 4 cut(s) 529, 1404, 1787, 1932
MmeI TCCRAC 1 cut(s) 982
Mox20I TGGCCA 2 cut(s) 131, 1850
Mph1103I ATGCAT 1 cut(s) 925
MroXI GAANNNNTTC 3 cut(s) 29, 105, 515
MscI TGGCCA 2 cut(s) 131, 1850
MseI TTAA 5 cut(s) 563, 1166, 1416, 1706, 1859
MslI CAYNNNNRTG 3 cut(s) 38, 1095, 1376
Msp20I TGGCCA 2 cut(s) 131, 1850
MspA1I CMGCKG 2 cut(s) 523, 2048
MspI CCGG 2 cut(s) 170, 1350
MspR9I CCNGG 2 cut(s) 1216, 1543
MunI CAATTG 2 cut(s) 251, 1042
MvaI CCWGG 2 cut(s) 1216, 1543
MvnI CGCG 2 cut(s) 654, 2048
MwoI GCNNNNNNNGC 6 cut(s) 56, 73, 1388, 1411, 1691, 2045
NarI GGCGCC 1 cut(s) 394
NlaIII CATG 8 cut(s) 37, 43, 64, 707, 1336, 1504, 1795, 1936
NlaIV GGNNCC 4 cut(s) 214, 395, 1278, 1972
NmuCI GTSAC 6 cut(s) 382, 532, 1132, 1369, 1407, 1892
NsiI ATGCAT 1 cut(s) 925
NspI RCATGY 2 cut(s) 1336, 1795
PagI TCATGA 1 cut(s) 1932
PasI CCCWGGG 1 cut(s) 1542
PciI ACATGT 1 cut(s) 1791
PdmI GAANNNNTTC 3 cut(s) 29, 105, 515
PfeI GAWTC 4 cut(s) 304, 662, 1286, 1459
PkrI GCNGC 5 cut(s) 49, 453, 1612, 1693, 2050
PleI GAGTC 4 cut(s) 529, 1403, 1786, 1931
PluTI GGCGCC 1 cut(s) 397
PmaCI CACGTG 2 cut(s) 1097, 1327
PmlI CACGTG 2 cut(s) 1097, 1327
PpsI GAGTC 4 cut(s) 529, 1403, 1786, 1931
Ppu21I YACGTR 2 cut(s) 1097, 1327
PscI ACATGT 1 cut(s) 1791
Psp6I CCWGG 2 cut(s) 1214, 1541
PspCI CACGTG 2 cut(s) 1097, 1327
PspGI CCWGG 2 cut(s) 1214, 1541
PspN4I GGNNCC 4 cut(s) 214, 395, 1278, 1972
PspPI GGNCC 2 cut(s) 213, 1871
PstI CTGCAG 3 cut(s) 1057, 1407, 1696
PstNI CAGNNNCTG 2 cut(s) 1152, 1411
PsuI RGATCY 3 cut(s) 1219, 1726, 2008
RsaI GTAC 2 cut(s) 617, 1122
RsaNI GTAC 2 cut(s) 616, 1121
RseI CAYNNNNRTG 3 cut(s) 38, 1095, 1376
SacII CCGCGG 1 cut(s) 2049
SaqAI TTAA 5 cut(s) 563, 1166, 1416, 1706, 1859
SatI GCNGC 5 cut(s) 48, 452, 1611, 1692, 2049
Sau96I GGNCC 2 cut(s) 213, 1871
SchI GAGTC 4 cut(s) 529, 1404, 1787, 1932
ScrFI CCNGG 2 cut(s) 1216, 1543
SduI GDGCHC 2 cut(s) 204, 1332
SfaNI GCATC 3 cut(s) 232, 1056, 1287
SfcI CTRYAG 3 cut(s) 1053, 1403, 1692
SfoI GGCGCC 1 cut(s) 395
Sfr303I CCGCGG 1 cut(s) 2049
SgrBI CCGCGG 1 cut(s) 2049
SmiMI CAYNNNNRTG 3 cut(s) 38, 1095, 1376
SmlI CTYRAG 2 cut(s) 326, 413
SmoI CTYRAG 2 cut(s) 326, 413
SsiI CCGC 5 cut(s) 57, 523, 654, 2046, 2048
SspDI GGCGCC 1 cut(s) 393
SspI AATATT 1 cut(s) 261
SspMI CTAG 4 cut(s) 428, 558, 639, 689
StyD4I CCNGG 2 cut(s) 1214, 1541
StyI CCWWGG 1 cut(s) 557
TaaI ACNGT 6 cut(s) 347, 388, 1232, 1619, 1892, 1898
TaiI ACGT 2 cut(s) 1099, 1329
TauI GCSGC 1 cut(s) 2051
TfiI GAWTC 4 cut(s) 304, 662, 1286, 1459
Tru1I TTAA 5 cut(s) 563, 1166, 1416, 1706, 1859
Tru9I TTAA 5 cut(s) 563, 1166, 1416, 1706, 1859
TscAI CASTG 6 cut(s) 132, 393, 1057, 1416, 1630, 1903
TseFI GTSAC 6 cut(s) 382, 532, 1132, 1369, 1407, 1892
TseI GCWGC 4 cut(s) 47, 451, 1610, 1691
Tsp45I GTSAC 6 cut(s) 382, 532, 1132, 1369, 1407, 1892
TspGWI ACGGA 1 cut(s) 1151
TspRI CASTG 6 cut(s) 132, 393, 1057, 1416, 1630, 1903
VneI GTGCAC 1 cut(s) 1328
XapI RAATTY 4 cut(s) 951, 1205, 1426, 1708
XbaI TCTAGA 1 cut(s) 427
XceI RCATGY 2 cut(s) 1336, 1795
XcmI CCANNNNNNNNNTGG 1 cut(s) 226
XmaJI CCTAGG 1 cut(s) 557
XmiI GTMKAC 1 cut(s) 342
XmnI GAANNNNTTC 3 cut(s) 29, 105, 515
XspI CTAG 4 cut(s) 428, 558, 639, 689
Zsp2I ATGCAT 1 cut(s) 925
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.