AT2G36400

growth-regulating factor

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
15270088 .. 15273115
3028 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G36400.1

Sequence Viewer

Length: 1197 bp
ATGGATTTGCAACTGAAACAATGGAGAAGCCAGCAGCAGCAACAACATCAGACAGAGTCAGAAGAACAACCTTCTGCAGCTAAGATACCAAAACATGTCTTTGACCAGATTCATTCTCACACTGCAACTTCTACTGCTCTTCCTCTCTTTACCCCTGAGCCTACTTCTTCTAAACTCTCCTCTTTGTCTCCTGATTCTTCCTCCAGGTTCCCCAAGATGGGGAGCTTCTTTAGCTGGGCACAGTGGCAAGAACTTGAACTACAAGCTCTGATCTACAGGTACATGTTGGCTGGTGCTGCTGTTCCTCAGGAGCTCCTTTTACCAATCAAGAAAAGCCTTCTCCATCTATCTCCTTCCTACTTTCTTCACCATCCTCTTCAACACCTACCTCATTACCAACCTGCTTGGTATTTGGGAAGGGCAGCGATGGATCCTGAGCCAGGCAGATGCAGGAGAACGGATGGTAAGAAGTGGAGATGTTCAAGAGACGTCTTCGCTGGCCACAAGTATTGCGAGCGCCACATGCACCGTGGCCGCAACCGTTCAAGAAAGCCTGTGGAAACTCCAACCACCGTCAATGCAACTGCCACGTCCATGGCTTCATCAGTAGCAGCCGCAGCCACCACTACAACAGCAACAACAACATCTACGTTTGCTTTTGGTGGTGGTGGTGGTAGTGAGGAAGTGGTTGGTCAAGGAGGATCTTTCTTCTTCTCTGGCTCTTCTAACTCTTCATCTGAACTTCTCCACCTTAGTCAAAGTTGTTCGGAGATGAAGCAAGAAAGCAACAACATGAACAACAAGAGGCCATACGAGTCCCACATCGGATTCAGTAACAACAGATCAGATGGAGGACACATCCTGAGGCCCTTCTTTGACGATTGGCCTCGTTCTTCGCTCCAAGAAGCTGACAATAGTTCAAGCCCCATGAGCTCAGCCACTTGTCTCTCCATCTCCATGCCCGGGAACTCTTCCTCAGACGTCTCTCTGAAGCTGTCCACAGGCAACGAAGAGGGAGCCCGGAGCAACAACAATGGGAGAGATCAGCAAAACATGAGCTGGTGGAGCGGTGGAGGTTCCAACCACCATCATCACAACATGGGCGGACCATTGGCCGAAGCCCTGAGATCTTCTTCCTCATCTTCCCCAACCAGTGTTCTCCATCAGCTTGGTGTCTCGACACAAGCCTTTCATTGA

Protein Analysis

398

Amino Acids

43.71

Weight (kDa)

8.56

Isoelectric Point (pI)

74.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
QLQ PF08880 77 - 109 7.3e-13 QLQ
WRC PF08879 145 - 187 2e-21 WRC
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012002)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 492, 984
Acc36I ACCTGC 1 cut(s) 409
AccBSI CCGCTC 1 cut(s) 1068
AciI CCGC 4 cut(s) 535, 615, 1068, 1104
AclWI GGATC 3 cut(s) 425, 438, 709
AcoI YGGCCR 3 cut(s) 499, 532, 1113
AcuI CTGAAG 1 cut(s) 1010
AcyI GRCGYC 2 cut(s) 489, 981
AfaI GTAC 1 cut(s) 281
AfiI CCNNNNNNNGG 5 cut(s) 217, 218, 219, 440, 963
AflIII ACRYGT 2 cut(s) 94, 282
AgsI TTSAA 5 cut(s) 257, 380, 483, 546, 921
AjiI CACGTC 1 cut(s) 591
AjnI CCWGG 2 cut(s) 203, 439
Alw21I GWGCWC 2 cut(s) 315, 935
Alw26I GTCTC 5 cut(s) 192, 480, 950, 988, 1180
AlwI GGATC 3 cut(s) 425, 438, 709
Ama87I CYCGRG 1 cut(s) 962
AoxI GGCC 6 cut(s) 499, 532, 806, 866, 884, 1113
ApeKI GCWGC 7 cut(s) 34, 37, 77, 296, 422, 611, 617
AspLEI GCGC 1 cut(s) 519
AspS9I GGNCC 2 cut(s) 867, 1106
AsuC2I CCSGG 3 cut(s) 963, 964, 1021
AsuHPI GGTGA 1 cut(s) 359
AvaI CYCGRG 1 cut(s) 962
AvaII GGWCC 1 cut(s) 1106
AxyI CCTNAGG 2 cut(s) 306, 863
BaeGI GKGCMC 1 cut(s) 241
BalI TGGCCA 1 cut(s) 501
BamHI GGATCC 1 cut(s) 430
BanII GRGCYC 3 cut(s) 315, 935, 1021
BbsI GAAGAC 1 cut(s) 484
Bbv12I GWGCWC 2 cut(s) 315, 935
BbvI GCAGC 7 cut(s) 46, 49, 89, 283, 434, 623, 629
BccI CCATC 9 cut(s) 211, 351, 378, 421, 455, 842, 959, 1095, 1170
BciT130I CCWGG 2 cut(s) 205, 441
BcnI CCSGG 3 cut(s) 963, 964, 1021
BcoDI GTCTC 5 cut(s) 192, 480, 950, 988, 1180
BfmI CTRYAG 2 cut(s) 75, 274
BfoI RGCGCY 1 cut(s) 520
BfuAI ACCTGC 1 cut(s) 409
BglII AGATCT 1 cut(s) 1127
BisI GCNGC 9 cut(s) 35, 38, 78, 297, 423, 535, 612, 615, 618
BlpI GCTNAGC 1 cut(s) 934
BlsI GCNGC 9 cut(s) 36, 39, 79, 298, 424, 536, 613, 616, 619
Bme1390I CCNGG 5 cut(s) 205, 441, 963, 964, 1021
Bme18I GGWCC 1 cut(s) 1106
BmeT110I CYCGRG 1 cut(s) 962
BmgBI CACGTC 1 cut(s) 591
BmgT120I GGNCC 2 cut(s) 867, 1106
BmiI GGNNCC 4 cut(s) 209, 432, 1018, 1078
BmrFI CCNGG 5 cut(s) 205, 441, 963, 964, 1021
BmsI GCATC 1 cut(s) 437
BpiI GAAGAC 1 cut(s) 484
BpmI CTGGAG 1 cut(s) 187
Bpu10I CCTNAGC 2 cut(s) 156, 435
Bpu1102I GCTNAGC 1 cut(s) 934
BpuMI CCSGG 3 cut(s) 963, 964, 1021
BsaHI GRCGYC 2 cut(s) 489, 981
BsaJI CCNNGG 3 cut(s) 529, 594, 962
Bsc4I CCNNNNNNNGG 5 cut(s) 217, 218, 219, 440, 963
Bse1I ACTGG 1 cut(s) 1152
Bse21I CCTNAGG 2 cut(s) 306, 863
BseBI CCWGG 2 cut(s) 205, 441
BseDI CCNNGG 3 cut(s) 529, 594, 962
BseGI GGATG 3 cut(s) 370, 466, 858
BseLI CCNNNNNNNGG 5 cut(s) 217, 218, 219, 440, 963
BseMII CTCAG 7 cut(s) 147, 320, 426, 854, 948, 990, 1115
BseNI ACTGG 1 cut(s) 1152
BseRI GAGGAG 1 cut(s) 169
BseSI GKGCMC 1 cut(s) 241
BseXI GCAGC 7 cut(s) 46, 49, 89, 283, 434, 623, 629
BseYI CCCAGC 1 cut(s) 234
BshFI GGCC 6 cut(s) 501, 534, 808, 868, 886, 1115
BsiHKAI GWGCWC 2 cut(s) 315, 935
BsiHKCI CYCGRG 1 cut(s) 962
BsiSI CCGG 2 cut(s) 963, 1021
BslFI GGGAC 1 cut(s) 802
BslI CCNNNNNNNGG 5 cut(s) 217, 218, 219, 440, 963
BsmAI GTCTC 5 cut(s) 192, 480, 950, 988, 1180
BsmBI CGTCTC 2 cut(s) 480, 988
BsmFI GGGAC 1 cut(s) 802
BsnI GGCC 6 cut(s) 501, 534, 808, 868, 886, 1115
BsoBI CYCGRG 1 cut(s) 962
Bsp1286I GDGCHC 4 cut(s) 241, 315, 935, 1021
Bsp143I GATC 6 cut(s) 270, 430, 701, 842, 1042, 1127
Bsp1720I GCTNAGC 1 cut(s) 934
Bsp19I CCATGG 1 cut(s) 594
BspACI CCGC 4 cut(s) 535, 615, 1068, 1104
BspANI GGCC 6 cut(s) 501, 534, 808, 868, 886, 1115
BspCNI CTCAG 7 cut(s) 148, 319, 427, 855, 947, 989, 1116
BspLI GGNNCC 4 cut(s) 209, 432, 1018, 1078
BspMAI CTGCAG 1 cut(s) 79
BspMI ACCTGC 1 cut(s) 409
BspPI GGATC 3 cut(s) 425, 438, 709
BspQI GCTCTTC 2 cut(s) 144, 727
BsrBI CCGCTC 1 cut(s) 1068
BsrI ACTGG 1 cut(s) 1152
BssECI CCNNGG 3 cut(s) 529, 594, 962
BssMI GATC 6 cut(s) 270, 430, 701, 842, 1042, 1127
BssNI GRCGYC 2 cut(s) 489, 981
BssT1I CCWWGG 1 cut(s) 594
Bst2UI CCWGG 2 cut(s) 205, 441
Bst4CI ACNGT 4 cut(s) 243, 530, 542, 574
Bst6I CTCTTC 6 cut(s) 144, 381, 727, 736, 976, 1005
BstACI GRCGYC 2 cut(s) 489, 981
BstC8I GCNNGC 3 cut(s) 32, 499, 515
BstDEI CTNAG 9 cut(s) 81, 156, 306, 435, 752, 863, 934, 976, 1124
BstDSI CCRYGG 2 cut(s) 529, 594
BstENI CCTNNNNNAGG 1 cut(s) 438
BstF5I GGATG 3 cut(s) 370, 466, 858
BstH2I RGCGCY 1 cut(s) 520
BstHHI GCGC 1 cut(s) 519
BstKTI GATC 6 cut(s) 273, 433, 704, 845, 1045, 1130
BstMAI GTCTC 5 cut(s) 192, 480, 950, 988, 1180
BstMBI GATC 6 cut(s) 270, 430, 701, 842, 1042, 1127
BstMWI GCNNNNNNNGC 6 cut(s) 231, 296, 523, 617, 930, 1065
BstNI CCWGG 2 cut(s) 205, 441
BstNSI RCATGY 3 cut(s) 98, 286, 526
BstSCI CCNGG 5 cut(s) 203, 439, 961, 962, 1019
BstSFI CTRYAG 2 cut(s) 75, 274
BstSLI GKGCMC 1 cut(s) 241
BstV1I GCAGC 7 cut(s) 46, 49, 89, 283, 434, 623, 629
BstV2I GAAGAC 1 cut(s) 484
BstX2I RGATCY 3 cut(s) 430, 701, 1127
BstXI CCANNNNNNTGG 2 cut(s) 595, 1169
BstYI RGATCY 3 cut(s) 430, 701, 1127
Bsu36I CCTNAGG 2 cut(s) 306, 863
BsuRI GGCC 6 cut(s) 501, 534, 808, 868, 886, 1115
BtgI CCRYGG 2 cut(s) 529, 594
BtgZI GCGATG 1 cut(s) 440
BtrI CACGTC 1 cut(s) 591
BtsCI GGATG 3 cut(s) 370, 466, 858
BtsI GCAGTG 1 cut(s) 120
BtsIMutI CAGTG 3 cut(s) 120, 248, 1159
BveI ACCTGC 1 cut(s) 409
Cac8I GCNNGC 3 cut(s) 32, 499, 515
CfoI GCGC 1 cut(s) 519
Cfr13I GGNCC 2 cut(s) 867, 1106
Cfr9I CCCGGG 1 cut(s) 962
Csp6I GTAC 1 cut(s) 280
CspCI CAANNNNNGTGG 2 cut(s) 491, 526
CviAII CATG 9 cut(s) 95, 283, 523, 595, 793, 928, 958, 1054, 1099
CviQI GTAC 1 cut(s) 280
DdeI CTNAG 9 cut(s) 81, 156, 306, 435, 752, 863, 934, 976, 1124
DpnI GATC 6 cut(s) 272, 432, 703, 844, 1044, 1129
DpnII GATC 6 cut(s) 270, 430, 701, 842, 1042, 1127
EaeI YGGCCR 3 cut(s) 499, 532, 1113
Eam1104I CTCTTC 6 cut(s) 144, 381, 727, 736, 976, 1005
EarI CTCTTC 6 cut(s) 144, 381, 727, 736, 976, 1005
EciI GGCGGA 1 cut(s) 1119
Ecl136II GAGCTC 2 cut(s) 313, 933
Eco130I CCWWGG 1 cut(s) 594
Eco24I GRGCYC 3 cut(s) 315, 935, 1021
Eco47I GGWCC 1 cut(s) 1106
Eco53kI GAGCTC 2 cut(s) 313, 933
Eco57I CTGAAG 1 cut(s) 1010
Eco81I CCTNAGG 2 cut(s) 306, 863
Eco88I CYCGRG 1 cut(s) 962
EcoICRI GAGCTC 2 cut(s) 313, 933
EcoNI CCTNNNNNAGG 1 cut(s) 438
EcoO109I RGGNCCY 1 cut(s) 867
EcoRII CCWGG 2 cut(s) 203, 439
EcoT14I CCWWGG 1 cut(s) 594
EcoT38I GRGCYC 3 cut(s) 315, 935, 1021
ErhI CCWWGG 1 cut(s) 594
Esp3I CGTCTC 2 cut(s) 480, 988
FaeI CATG 9 cut(s) 98, 286, 526, 598, 796, 931, 961, 1057, 1102
FaqI GGGAC 1 cut(s) 802
FatI CATG 9 cut(s) 94, 282, 522, 594, 792, 927, 957, 1053, 1098
Fnu4HI GCNGC 9 cut(s) 35, 38, 78, 297, 423, 535, 612, 615, 618
FokI GGATG 3 cut(s) 357, 473, 845
FriOI GRGCYC 3 cut(s) 315, 935, 1021
Fsp4HI GCNGC 9 cut(s) 35, 38, 78, 297, 423, 535, 612, 615, 618
GlaI GCGC 1 cut(s) 518
GluI GCNGC 9 cut(s) 35, 38, 78, 297, 423, 535, 612, 615, 618
GsaI CCCAGC 1 cut(s) 238
GsuI CTGGAG 1 cut(s) 187
HaeII RGCGCY 1 cut(s) 520
HaeIII GGCC 6 cut(s) 501, 534, 808, 868, 886, 1115
HapII CCGG 2 cut(s) 963, 1021
HhaI GCGC 1 cut(s) 519
Hin1I GRCGYC 2 cut(s) 489, 981
Hin1II CATG 9 cut(s) 98, 286, 526, 598, 796, 931, 961, 1057, 1102
Hin6I GCGC 1 cut(s) 517
HinP1I GCGC 1 cut(s) 517
HinfI GANTC 5 cut(s) 56, 109, 194, 815, 828
HpaII CCGG 2 cut(s) 963, 1021
HphI GGTGA 1 cut(s) 359
Hpy166II GTNNAC 1 cut(s) 999
Hpy188I TCNGA 9 cut(s) 51, 61, 270, 739, 769, 827, 847, 979, 990
Hpy188III TCNNGA 8 cut(s) 191, 308, 328, 434, 483, 546, 862, 1177
Hpy8I GTNNAC 1 cut(s) 999
HpyAV CCTTC 5 cut(s) 81, 347, 363, 411, 880
HpyCH4III ACNGT 4 cut(s) 243, 530, 542, 574
HpyCH4IV ACGT 4 cut(s) 489, 590, 650, 981
HpyCH4V TGCA 6 cut(s) 10, 77, 125, 450, 526, 581
HpyF10VI GCNNNNNNNGC 6 cut(s) 231, 296, 523, 617, 930, 1065
HpyF3I CTNAG 9 cut(s) 81, 156, 306, 435, 752, 863, 934, 976, 1124
HpySE526I ACGT 4 cut(s) 489, 590, 650, 981
Hsp92I GRCGYC 2 cut(s) 489, 981
Hsp92II CATG 9 cut(s) 98, 286, 526, 598, 796, 931, 961, 1057, 1102
HspAI GCGC 1 cut(s) 517
Kzo9I GATC 6 cut(s) 270, 430, 701, 842, 1042, 1127
LguI GCTCTTC 2 cut(s) 144, 727
LmnI GCTCC 7 cut(s) 222, 310, 318, 903, 1016, 1023, 1065
Lsp1109I GCAGC 7 cut(s) 46, 49, 89, 283, 434, 623, 629
LweI GCATC 1 cut(s) 437
MaeII ACGT 4 cut(s) 489, 590, 650, 981
MaeIII GTNAC 1 cut(s) 833
MalI GATC 6 cut(s) 272, 432, 703, 844, 1044, 1129
MbiI CCGCTC 1 cut(s) 1068
MboI GATC 6 cut(s) 270, 430, 701, 842, 1042, 1127
MflI RGATCY 3 cut(s) 430, 701, 1127
MhlI GDGCHC 4 cut(s) 241, 315, 935, 1021
MlsI TGGCCA 1 cut(s) 501
MluNI TGGCCA 1 cut(s) 501
MlyI GAGTC 2 cut(s) 65, 824
MmeI TCCRAC 2 cut(s) 590, 1104
Mox20I TGGCCA 1 cut(s) 501
MscI TGGCCA 1 cut(s) 501
MslI CAYNNNNRTG 2 cut(s) 593, 956
Msp20I TGGCCA 1 cut(s) 501
MspI CCGG 2 cut(s) 963, 1021
MspR9I CCNGG 5 cut(s) 205, 441, 963, 964, 1021
MvaI CCWGG 2 cut(s) 205, 441
MwoI GCNNNNNNNGC 6 cut(s) 231, 296, 523, 617, 930, 1065
NciI CCSGG 3 cut(s) 963, 964, 1021
NcoI CCATGG 1 cut(s) 594
NdeII GATC 6 cut(s) 270, 430, 701, 842, 1042, 1127
NlaIII CATG 9 cut(s) 98, 286, 526, 598, 796, 931, 961, 1057, 1102
NlaIV GGNNCC 4 cut(s) 209, 432, 1018, 1078
NspI RCATGY 3 cut(s) 98, 286, 526
PciI ACATGT 2 cut(s) 94, 282
PciSI GCTCTTC 2 cut(s) 144, 727
PfeI GAWTC 3 cut(s) 109, 194, 828
PflFI GACNNNGTC 1 cut(s) 55
PkrI GCNGC 9 cut(s) 36, 39, 79, 298, 424, 536, 613, 616, 619
PleI GAGTC 2 cut(s) 64, 823
PpsI GAGTC 2 cut(s) 64, 823
PscI ACATGT 2 cut(s) 94, 282
Psp124BI GAGCTC 2 cut(s) 315, 935
Psp6I CCWGG 2 cut(s) 203, 439
PspFI CCCAGC 1 cut(s) 234
PspGI CCWGG 2 cut(s) 203, 439
PspN4I GGNNCC 4 cut(s) 209, 432, 1018, 1078
PspPI GGNCC 2 cut(s) 867, 1106
PsrI GAACNNNNNNTAC 2 cut(s) 243, 275
PstI CTGCAG 1 cut(s) 79
PsuI RGATCY 3 cut(s) 430, 701, 1127
PsyI GACNNNGTC 1 cut(s) 55
RsaI GTAC 1 cut(s) 281
RsaNI GTAC 1 cut(s) 280
RseI CAYNNNNRTG 2 cut(s) 593, 956
SacI GAGCTC 2 cut(s) 315, 935
SapI GCTCTTC 2 cut(s) 144, 727
SatI GCNGC 9 cut(s) 35, 38, 78, 297, 423, 535, 612, 615, 618
Sau3AI GATC 6 cut(s) 270, 430, 701, 842, 1042, 1127
Sau96I GGNCC 2 cut(s) 867, 1106
SchI GAGTC 2 cut(s) 65, 824
ScrFI CCNGG 5 cut(s) 205, 441, 963, 964, 1021
SduI GDGCHC 4 cut(s) 241, 315, 935, 1021
SfaNI GCATC 1 cut(s) 437
SfcI CTRYAG 2 cut(s) 75, 274
SinI GGWCC 1 cut(s) 1106
SmaI CCCGGG 1 cut(s) 964
SmiMI CAYNNNNRTG 2 cut(s) 593, 956
SsiI CCGC 4 cut(s) 535, 615, 1068, 1104
SstI GAGCTC 2 cut(s) 315, 935
StyD4I CCNGG 5 cut(s) 203, 439, 961, 962, 1019
StyI CCWWGG 1 cut(s) 594
TaaI ACNGT 4 cut(s) 243, 530, 542, 574
TaiI ACGT 4 cut(s) 492, 593, 653, 984
TaqI TCGA 1 cut(s) 1178
TauI GCSGC 2 cut(s) 537, 617
TfiI GAWTC 3 cut(s) 109, 194, 828
TscAI CASTG 3 cut(s) 127, 248, 1159
TseI GCWGC 7 cut(s) 34, 37, 77, 296, 422, 611, 617
TspDTI ATGAA 6 cut(s) 101, 591, 723, 788, 809, 1181
TspGWI ACGGA 1 cut(s) 473
TspMI CCCGGG 1 cut(s) 962
TspRI CASTG 3 cut(s) 127, 248, 1159
Tth111I GACNNNGTC 1 cut(s) 55
VpaK11BI GGWCC 1 cut(s) 1106
XagI CCTNNNNNAGG 1 cut(s) 438
XceI RCATGY 3 cut(s) 98, 286, 526
XcmI CCANNNNNNNNNTGG 1 cut(s) 527
XmaI CCCGGG 1 cut(s) 962
ZraI GACGTC 2 cut(s) 490, 982
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.