MD14G1017600.v1.1

Growth-regulating factor

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Forward (+)
1652199 .. 1655992
3794 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1017600.v1.1.491

Sequence Viewer

Length: 1194 bp
ATGGACTTCTACCTTAAGCAATGGAAACCCCAGCAGCAGGAGCAGTCAGAGGAACAACATTCTGCAAAGATACCAAAACTTGACCTTGATCCCCATCAAAACTCAGAGCATCCAACTGCTGGGTCTGCTGCTGGGTATGCTCTCCCTCTGTTTGTATCTGAACCCAACACCAAAATGCTGTCAGCATTTTCTGATTCCTCACCTGCCACCTCCAGATTTCCCAAAATGGGAAGCTATTTCAGCTTGTCACAGTGGCAGGAGCTGGAGCTGCAGGCTTTGATATTCAGGTACATGGCGGCCGGTGCGGCTGTTCCTTCTGAGCTTCTTCAGCCAATCAGGAAAAGCCTCCTCGGTTCTGCTCCTTATTTTCTCCACCACCCTCTCCAACAGCTCCCTCACTTTCAACCTGCTTTGTTGCAATCAGGGTATTGGGGAAGAACTGCCATGGATCCGGAACCGACGAGGTGCAGGAGGACAGATGGTAAGAAATGGCGGTGCTCGAGAGATGTGGTGGCGGGTCAGAAGTACTGTGAGCGCCATGTGCACCGTGGCAGAAACCGTTCAAGAAAGCCTGTGGAAGTGACAACCACAACCACGACGACGACCACCGCTTGTGGCGGAGGGAGTGGCAGTAATCTTAGTATTGCTACCACCACCACCAATACATCAGCTAGTGGGGCGCATTTCGCTCTCTCTGGGTCCTCATCATCCCCTTCAGTTGATCTGCTTCATCTCAACCAAAGTTCTTCAGAGTCCAAACCTGAGAACAGGAGCCTCTTCGAGTCCCGCGGTGAGTTCTCTGCGAGTGCCAAATCCGACAGCCATGTCTTGAGGCCTTTTTTTGATGACTGGCCGGGGAAGCTCCAAGAACTCGACAATGCAGGAAGCAGACCTATCTCAATGAACTCGGCCACCAGCCTCTCCATTTCGATACGTGGAAATACCTCATCGGATGTGTCGTTGAAATTGTCTACTGGCAATGGGGTCGAGCCAGGCCACCAGGACAGCCATGCCGAGCGAGGGCAGCCACAGTTAAATTGGCCCGCTGGGTGGGCAACAAACCAAATGGCGTCCATGGGAGGACCACTTGCAGAGGCCCTGCGGTCCTCTTCCAACTCCAATTCCTCACCAACCAGCGTCTTACATCGGTTGCCCCGTGGCTCTGCCTCCGAAACTAGCTTTATCAGCACTTGA

Protein Analysis

398

Amino Acids

43.12

Weight (kDa)

8.83

Isoelectric Point (pI)

54.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
QLQ PF08880 80 - 113 2.5e-13 QLQ
WRC PF08879 151 - 193 4.4e-21 WRC
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0012002)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 211
AasI GACNNNNNNGTC 1 cut(s) 824
Acc36I ACCTGC 2 cut(s) 211, 415
AccB7I CCANNNNNTGG 1 cut(s) 119
AccI GTMKAC 1 cut(s) 971
AccII CGCG 1 cut(s) 789
AccIII TCCGGA 1 cut(s) 451
AclWI GGATC 3 cut(s) 83, 443, 456
AcoI YGGCCR 3 cut(s) 297, 851, 909
AcuI CTGAAG 3 cut(s) 311, 699, 732
AcyI GRCGYC 1 cut(s) 1070
AfaI GTAC 2 cut(s) 290, 527
AfiI CCNNNNNNNGG 5 cut(s) 37, 119, 227, 1020, 1050
AflII CTTAAG 1 cut(s) 14
AgsI TTSAA 3 cut(s) 404, 564, 964
AjnI CCWGG 2 cut(s) 991, 999
AluBI AGCT 9 cut(s) 234, 243, 262, 268, 322, 391, 671, 862, 1179
AluI AGCT 9 cut(s) 234, 243, 262, 268, 322, 391, 671, 862, 1179
Alw21I GWGCWC 2 cut(s) 500, 546
Alw44I GTGCAC 1 cut(s) 542
AlwI GGATC 3 cut(s) 83, 443, 456
AlwNI CAGNNNCTG 1 cut(s) 262
Ama87I CYCGRG 1 cut(s) 499
Aor13HI TCCGGA 1 cut(s) 451
AoxI GGCC 7 cut(s) 297, 833, 851, 909, 994, 1040, 1095
ApaLI GTGCAC 1 cut(s) 542
ApeKI GCWGC 4 cut(s) 34, 128, 268, 1024
Asp700I GAANNNNTTC 1 cut(s) 559
AspLEI GCGC 2 cut(s) 537, 682
AspS9I GGNCC 5 cut(s) 699, 1041, 1082, 1096, 1104
AsuC2I CCSGG 1 cut(s) 855
AsuHPI GGTGA 3 cut(s) 192, 803, 1119
AvaI CYCGRG 1 cut(s) 499
AvaII GGWCC 3 cut(s) 699, 1082, 1104
BaeGI GKGCMC 1 cut(s) 546
BamHI GGATCC 1 cut(s) 448
Bbv12I GWGCWC 2 cut(s) 500, 546
BbvI GCAGC 4 cut(s) 46, 115, 255, 1036
BccI CCATC 2 cut(s) 102, 473
BcgI CGANNNNNNTGC 2 cut(s) 967, 1001
BciT130I CCWGG 2 cut(s) 993, 1001
BcnI CCSGG 1 cut(s) 855
BfaI CTAG 2 cut(s) 672, 1176
BfmI CTRYAG 1 cut(s) 269
BfoI RGCGCY 1 cut(s) 538
BfrI CTTAAG 1 cut(s) 14
BfuAI ACCTGC 2 cut(s) 211, 415
BglI GCCNNNNNGGC 1 cut(s) 305
BisI GCNGC 6 cut(s) 35, 129, 269, 297, 306, 1025
BlsI GCNGC 6 cut(s) 36, 130, 270, 298, 307, 1026
BmcAI AGTACT 1 cut(s) 527
Bme1390I CCNGG 3 cut(s) 855, 993, 1001
Bme18I GGWCC 3 cut(s) 699, 1082, 1104
BmeT110I CYCGRG 1 cut(s) 499
BmgT120I GGNCC 5 cut(s) 699, 1041, 1082, 1096, 1104
BmiI GGNNCC 4 cut(s) 450, 456, 700, 773
BmrFI CCNGG 3 cut(s) 855, 993, 1001
BmsI GCATC 1 cut(s) 118
BpmI CTGGAG 2 cut(s) 196, 284
BpuEI CTTGAG 1 cut(s) 850
BpuMI CCSGG 1 cut(s) 855
BsaAI YACGTR 1 cut(s) 935
BsaBI GATNNNNATC 1 cut(s) 93
BsaHI GRCGYC 1 cut(s) 1070
BsaJI CCNNGG 7 cut(s) 349, 444, 547, 787, 854, 1074, 1156
BsaWI WCCGGW 1 cut(s) 451
BsaXI ACNNNNNCTCC 2 cut(s) 616, 646
Bsc4I CCNNNNNNNGG 5 cut(s) 37, 119, 227, 1020, 1050
Bse118I RCCGGY 1 cut(s) 299
Bse1I ACTGG 2 cut(s) 854, 979
Bse3DI GCAATG 2 cut(s) 26, 985
Bse8I GATNNNNATC 1 cut(s) 93
BseAI TCCGGA 1 cut(s) 451
BseBI CCWGG 2 cut(s) 993, 1001
BseDI CCNNGG 7 cut(s) 349, 444, 547, 787, 854, 1074, 1156
BseGI GGATG 3 cut(s) 109, 707, 958
BseJI GATNNNNATC 1 cut(s) 93
BseLI CCNNNNNNNGG 5 cut(s) 37, 119, 227, 1020, 1050
BseMI GCAATG 2 cut(s) 26, 985
BseMII CTCAG 3 cut(s) 117, 309, 753
BseNI ACTGG 2 cut(s) 854, 979
BseRI GAGGAG 1 cut(s) 338
BseSI GKGCMC 1 cut(s) 546
BseX3I CGGCCG 1 cut(s) 297
BseXI GCAGC 4 cut(s) 46, 115, 255, 1036
BseYI CCCAGC 4 cut(s) 30, 119, 131, 1046
BsgI GTGCAG 1 cut(s) 487
Bsh1236I CGCG 1 cut(s) 789
Bsh1285I CGRYCG 1 cut(s) 300
BshFI GGCC 7 cut(s) 299, 835, 853, 911, 996, 1042, 1097
BsiEI CGRYCG 1 cut(s) 300
BsiHKAI GWGCWC 2 cut(s) 500, 546
BsiHKCI CYCGRG 1 cut(s) 499
BsiSI CCGG 3 cut(s) 300, 452, 854
BslFI GGGAC 1 cut(s) 769
BslI CCNNNNNNNGG 5 cut(s) 37, 119, 227, 1020, 1050
BsmFI GGGAC 1 cut(s) 769
BsnI GGCC 7 cut(s) 299, 835, 853, 911, 996, 1042, 1097
BsoBI CYCGRG 1 cut(s) 499
Bsp1286I GDGCHC 2 cut(s) 500, 546
Bsp13I TCCGGA 1 cut(s) 451
Bsp143I GATC 3 cut(s) 88, 448, 721
Bsp19I CCATGG 2 cut(s) 444, 1074
BspANI GGCC 7 cut(s) 299, 835, 853, 911, 996, 1042, 1097
BspCNI CTCAG 3 cut(s) 116, 310, 754
BspEI TCCGGA 1 cut(s) 451
BspFNI CGCG 1 cut(s) 789
BspLI GGNNCC 4 cut(s) 450, 456, 700, 773
BspMAI CTGCAG 1 cut(s) 273
BspMI ACCTGC 2 cut(s) 211, 415
BspPI GGATC 3 cut(s) 83, 443, 456
BspTI CTTAAG 1 cut(s) 14
BsrDI GCAATG 2 cut(s) 26, 985
BsrFI RCCGGY 1 cut(s) 299
BsrI ACTGG 2 cut(s) 854, 979
BssAI RCCGGY 1 cut(s) 299
BssECI CCNNGG 7 cut(s) 349, 444, 547, 787, 854, 1074, 1156
BssMI GATC 3 cut(s) 88, 448, 721
BssNI GRCGYC 1 cut(s) 1070
BssT1I CCWWGG 2 cut(s) 444, 1074
Bst2UI CCWGG 2 cut(s) 993, 1001
Bst4CI ACNGT 5 cut(s) 252, 530, 548, 560, 1032
Bst6I CTCTTC 2 cut(s) 782, 1114
BstACI GRCGYC 1 cut(s) 1070
BstAFI CTTAAG 1 cut(s) 14
BstBAI YACGTR 1 cut(s) 935
BstC8I GCNNGC 2 cut(s) 273, 1044
BstDEI CTNAG 4 cut(s) 103, 318, 638, 762
BstDSI CCRYGG 5 cut(s) 444, 547, 787, 1074, 1156
BstF5I GGATG 3 cut(s) 109, 707, 958
BstFNI CGCG 1 cut(s) 789
BstH2I RGCGCY 1 cut(s) 538
BstHHI GCGC 2 cut(s) 537, 682
BstKTI GATC 3 cut(s) 91, 451, 724
BstMBI GATC 3 cut(s) 88, 448, 721
BstMCI CGRYCG 1 cut(s) 300
BstNI CCWGG 2 cut(s) 993, 1001
BstSCI CCNGG 3 cut(s) 853, 991, 999
BstSFI CTRYAG 1 cut(s) 269
BstSLI GKGCMC 1 cut(s) 546
BstUI CGCG 1 cut(s) 789
BstV1I GCAGC 4 cut(s) 46, 115, 255, 1036
BstX2I RGATCY 1 cut(s) 448
BstYI RGATCY 1 cut(s) 448
BstZI CGGCCG 1 cut(s) 297
BsuRI GGCC 7 cut(s) 299, 835, 853, 911, 996, 1042, 1097
BtgI CCRYGG 5 cut(s) 444, 547, 787, 1074, 1156
BtsCI GGATG 3 cut(s) 109, 707, 958
BtsIMutI CAGTG 1 cut(s) 257
BveI ACCTGC 2 cut(s) 211, 415
Cac8I GCNNGC 2 cut(s) 273, 1044
CaiI CAGNNNCTG 1 cut(s) 262
CfoI GCGC 2 cut(s) 537, 682
Cfr10I RCCGGY 1 cut(s) 299
Cfr13I GGNCC 5 cut(s) 699, 1041, 1082, 1096, 1104
Cfr42I CCGCGG 1 cut(s) 790
CseI GACGC 2 cut(s) 1059, 1126
Csp6I GTAC 2 cut(s) 289, 526
CviAII CATG 6 cut(s) 292, 445, 539, 824, 1010, 1075
CviQI GTAC 2 cut(s) 289, 526
DdeI CTNAG 4 cut(s) 103, 318, 638, 762
DpnI GATC 3 cut(s) 90, 450, 723
DpnII GATC 3 cut(s) 88, 448, 721
DrdI GACNNNNNNGTC 1 cut(s) 824
DseDI GACNNNNNNGTC 1 cut(s) 824
EaeI YGGCCR 3 cut(s) 297, 851, 909
EagI CGGCCG 1 cut(s) 297
Eam1104I CTCTTC 2 cut(s) 782, 1114
EarI CTCTTC 2 cut(s) 782, 1114
EciI GGCGGA 1 cut(s) 633
EclXI CGGCCG 1 cut(s) 297
Eco130I CCWWGG 2 cut(s) 444, 1074
Eco147I AGGCCT 1 cut(s) 835
Eco47I GGWCC 3 cut(s) 699, 1082, 1104
Eco52I CGGCCG 1 cut(s) 297
Eco57I CTGAAG 3 cut(s) 311, 699, 732
Eco88I CYCGRG 1 cut(s) 499
EcoO109I RGGNCCY 2 cut(s) 699, 1096
EcoRII CCWGG 2 cut(s) 991, 999
EcoT14I CCWWGG 2 cut(s) 444, 1074
ErhI CCWWGG 2 cut(s) 444, 1074
FaeI CATG 6 cut(s) 295, 448, 542, 827, 1013, 1078
FaiI YATR 7 cut(s) 138, 293, 446, 540, 825, 1011, 1076
FaqI GGGAC 1 cut(s) 769
FatI CATG 6 cut(s) 291, 444, 538, 823, 1009, 1074
FauI CCCGC 3 cut(s) 508, 794, 1051
FblI GTMKAC 1 cut(s) 971
Fnu4HI GCNGC 6 cut(s) 35, 129, 269, 297, 306, 1025
FokI GGATG 3 cut(s) 96, 694, 965
Fsp4HI GCNGC 6 cut(s) 35, 129, 269, 297, 306, 1025
FspBI CTAG 2 cut(s) 672, 1176
GlaI GCGC 2 cut(s) 536, 681
GluI GCNGC 6 cut(s) 35, 129, 269, 297, 306, 1025
GsaI CCCAGC 4 cut(s) 34, 123, 135, 1050
GsuI CTGGAG 2 cut(s) 196, 284
HaeII RGCGCY 1 cut(s) 538
HaeIII GGCC 7 cut(s) 299, 835, 853, 911, 996, 1042, 1097
HapII CCGG 3 cut(s) 300, 452, 854
HgaI GACGC 2 cut(s) 1059, 1126
HhaI GCGC 2 cut(s) 537, 682
Hin1I GRCGYC 1 cut(s) 1070
Hin1II CATG 6 cut(s) 295, 448, 542, 827, 1013, 1078
Hin6I GCGC 2 cut(s) 535, 680
HinP1I GCGC 2 cut(s) 535, 680
HinfI GANTC 3 cut(s) 194, 752, 782
HpaII CCGG 3 cut(s) 300, 452, 854
HphI GGTGA 3 cut(s) 192, 803, 1119
Hpy166II GTNNAC 2 cut(s) 544, 972
Hpy188III TCNNGA 6 cut(s) 213, 337, 452, 501, 564, 829
Hpy8I GTNNAC 2 cut(s) 544, 972
Hpy99I CGWCG 3 cut(s) 463, 601, 604
HpyAV CCTTC 2 cut(s) 324, 723
HpyCH4III ACNGT 5 cut(s) 252, 530, 548, 560, 1032
HpyCH4IV ACGT 1 cut(s) 934
HpyCH4V TGCA 7 cut(s) 65, 271, 418, 468, 544, 881, 1091
HpyF3I CTNAG 4 cut(s) 103, 318, 638, 762
HpySE526I ACGT 1 cut(s) 934
Hsp92I GRCGYC 1 cut(s) 1070
Hsp92II CATG 6 cut(s) 295, 448, 542, 827, 1013, 1078
HspAI GCGC 2 cut(s) 535, 680
Kpn2I TCCGGA 1 cut(s) 451
KspI CCGCGG 1 cut(s) 790
Kzo9I GATC 3 cut(s) 88, 448, 721
LmnI GCTCC 7 cut(s) 40, 259, 265, 364, 396, 771, 867
Lsp1109I GCAGC 4 cut(s) 46, 115, 255, 1036
LweI GCATC 1 cut(s) 118
MaeI CTAG 2 cut(s) 672, 1176
MaeII ACGT 1 cut(s) 934
MaeIII GTNAC 2 cut(s) 246, 580
MalI GATC 3 cut(s) 90, 450, 723
MboI GATC 3 cut(s) 88, 448, 721
MboII GAAGA 5 cut(s) 317, 447, 738, 769, 1101
MflI RGATCY 1 cut(s) 448
MhlI GDGCHC 2 cut(s) 500, 546
MluCI AATT 3 cut(s) 965, 1036, 1120
MlyI GAGTC 2 cut(s) 761, 791
MmeI TCCRAC 4 cut(s) 137, 409, 840, 1137
MroI TCCGGA 1 cut(s) 451
MroXI GAANNNNTTC 1 cut(s) 559
MseI TTAA 2 cut(s) 15, 1034
MslI CAYNNNNRTG 1 cut(s) 173
MspA1I CMGCKG 2 cut(s) 789, 1046
MspCI CTTAAG 1 cut(s) 14
MspI CCGG 3 cut(s) 300, 452, 854
MspR9I CCNGG 3 cut(s) 855, 993, 1001
MvaI CCWGG 2 cut(s) 993, 1001
MvnI CGCG 1 cut(s) 789
NciI CCSGG 1 cut(s) 855
NcoI CCATGG 2 cut(s) 444, 1074
NdeII GATC 3 cut(s) 88, 448, 721
NlaIII CATG 6 cut(s) 295, 448, 542, 827, 1013, 1078
NlaIV GGNNCC 4 cut(s) 450, 456, 700, 773
NmeAIII GCCGAG 2 cut(s) 887, 1039
NmuCI GTSAC 2 cut(s) 246, 580
PaeR7I CTCGAG 1 cut(s) 499
PaqCI CACCTGC 1 cut(s) 211
PceI AGGCCT 1 cut(s) 835
PcsI WCGNNNNNNNCGW 2 cut(s) 956, 1153
PdmI GAANNNNTTC 1 cut(s) 559
PfeI GAWTC 1 cut(s) 194
PflMI CCANNNNNTGG 1 cut(s) 119
PkrI GCNGC 6 cut(s) 36, 130, 270, 298, 307, 1026
PleI GAGTC 2 cut(s) 760, 790
PpsI GAGTC 2 cut(s) 760, 790
Ppu21I YACGTR 1 cut(s) 935
PpuMI RGGWCCY 1 cut(s) 699
Psp5II RGGWCCY 1 cut(s) 699
Psp6I CCWGG 2 cut(s) 991, 999
PspFI CCCAGC 4 cut(s) 30, 119, 131, 1046
PspGI CCWGG 2 cut(s) 991, 999
PspN4I GGNNCC 4 cut(s) 450, 456, 700, 773
PspPI GGNCC 5 cut(s) 699, 1041, 1082, 1096, 1104
PspPPI RGGWCCY 1 cut(s) 699
PstI CTGCAG 1 cut(s) 273
PstNI CAGNNNCTG 1 cut(s) 262
PsuI RGATCY 1 cut(s) 448
RsaI GTAC 2 cut(s) 290, 527
RsaNI GTAC 2 cut(s) 289, 526
RseI CAYNNNNRTG 1 cut(s) 173
SacII CCGCGG 1 cut(s) 790
SaqAI TTAA 2 cut(s) 15, 1034
SatI GCNGC 6 cut(s) 35, 129, 269, 297, 306, 1025
Sau3AI GATC 3 cut(s) 88, 448, 721
Sau96I GGNCC 5 cut(s) 699, 1041, 1082, 1096, 1104
ScaI AGTACT 1 cut(s) 527
SchI GAGTC 2 cut(s) 761, 791
ScrFI CCNGG 3 cut(s) 855, 993, 1001
SduI GDGCHC 2 cut(s) 500, 546
SfaNI GCATC 1 cut(s) 118
SfcI CTRYAG 1 cut(s) 269
Sfr274I CTCGAG 1 cut(s) 499
Sfr303I CCGCGG 1 cut(s) 790
SgrBI CCGCGG 1 cut(s) 790
SinI GGWCC 3 cut(s) 699, 1082, 1104
SlaI CTCGAG 1 cut(s) 499
SmiMI CAYNNNNRTG 1 cut(s) 173
SmlI CTYRAG 3 cut(s) 14, 499, 829
SmoI CTYRAG 3 cut(s) 14, 499, 829
Sse9I AATT 3 cut(s) 965, 1036, 1120
SseBI AGGCCT 1 cut(s) 835
SspMI CTAG 2 cut(s) 672, 1176
StuI AGGCCT 1 cut(s) 835
StyD4I CCNGG 3 cut(s) 853, 991, 999
StyI CCWWGG 2 cut(s) 444, 1074
TaaI ACNGT 5 cut(s) 252, 530, 548, 560, 1032
TaiI ACGT 1 cut(s) 937
TaqI TCGA 5 cut(s) 500, 780, 873, 929, 987
TasI AATT 3 cut(s) 965, 1036, 1120
TatI WGTACW 1 cut(s) 525
TauI GCSGC 2 cut(s) 299, 308
TfiI GAWTC 1 cut(s) 194
Tru1I TTAA 2 cut(s) 15, 1034
Tru9I TTAA 2 cut(s) 15, 1034
TscAI CASTG 1 cut(s) 257
TseFI GTSAC 2 cut(s) 246, 580
TseI GCWGC 4 cut(s) 34, 128, 268, 1024
Tsp45I GTSAC 2 cut(s) 246, 580
TspDTI ATGAA 2 cut(s) 719, 917
TspRI CASTG 1 cut(s) 257
Van91I CCANNNNNTGG 1 cut(s) 119
Vha464I CTTAAG 1 cut(s) 14
VneI GTGCAC 1 cut(s) 542
VpaK11BI GGWCC 3 cut(s) 699, 1082, 1104
XcmI CCANNNNNNNNNTGG 2 cut(s) 545, 1035
XhoI CTCGAG 1 cut(s) 499
XmiI GTMKAC 1 cut(s) 971
XmnI GAANNNNTTC 1 cut(s) 559
XspI CTAG 2 cut(s) 672, 1176
ZrmI AGTACT 1 cut(s) 527
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.