Prupe.7G115500_v2.0.a1

Growth-regulating factor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
14076370 .. 14079828
3459 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G115500.1

Sequence Viewer

Length: 1173 bp
ATGGACTTTCACCTCAAGCAATGGAGAAACCAGCAGCATGAGTCAGAGGAACAACATTCTGCAAAGATACCAAAACTTCACCTTGAGCCCCATCCACACTCAGAGCCATCTGGGTATGCTCTCCCTCTGTTTGTTCCTGAGCCCAACAGCAAAATGATCAGCACCCTGTCAGCGTTTTCTGAATCTACACCAGCATCTGCCTCCACCAGATTTCCCAAAATGGGGAGCTATTTCAGCTTCTCCCAGTTGCAGGAGCTTGAGCTGCAGGCTTTGATATTCAGGTACATGTTAGCTGGTGCTGCTGTTCCTCCTGAACTTCTTCAGCCAATCAGGAAAAGCCTTCTCCACTCTCCTCCATATTTTCTCCACCACCCTCTTCAACAGTACCCTCATTTTCAGCCTGCTTTGTTGCAATCAGGGTATTGGGGAAGAGCAGCCATGGATCCAGAGCCAACAAGGTGTAGAAGGACAGATGGCAAGAAATGGAGGTGTTCTAGAGATGTGGTGGCTGGTCAGAAGTACTGTGAGCGCCATGTGCACCGTGGCAGAAACCGTTCAAGAAAGCCTGTGGAAGCCACCACTGCTGCTGCTGGTGGTGGTGGTGGAGGGACAAGTGATATTGCTACCAACACCACCACCAAGACATCATCTAGTGGGGCCCATTTTACTCTTTCTGGGTCATCATCATCCCCTTCAATTGATCTGCTTCATCTCAACCAGAGTTCCTCAGAGCCCAAAGCTGAGAATAGGAGCCTCTTTGAACCCCACAGTGAGGTCTCCGGGAGTGCTAAATCCGACAGCCATGTCTTGCGGCCTTTTTTTGATGACTGGCCGGGGAAGCTCCAAGAACTGGACAATGCACGAACCAATGCTGGCTCAATGAACTCTGCCACCAGCCTCTCCATTTCGATACGGGGAAATTCCTCCTCGGATGTGTCACTGAAATTGTCTACCGGCAATGGAGTTGAGACAGGGCGCCTGGACGGCCATGCTGAGCGCGAGCAGCCACAATTGAATTGGCCTGCCGGATGGGGAACAAACCAAATGGCTTCCATGGGAGGGCCGCTTGCGGAGGCCCTTAGGTCCTCCTCCAACTCCAATTCCTCACCAACCAGTGTTCTACATCAGTTGCCCCGCAGCTCCGCCTCAGAAACTAGCTTTATCAGCACTTGA

Protein Analysis

391

Amino Acids

42.54

Weight (kDa)

8.7

Isoelectric Point (pI)

56.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012002)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 803
AccB1I GGYRCC 1 cut(s) 975
AccB7I CCANNNNNTGG 1 cut(s) 850
AccI GTMKAC 1 cut(s) 950
AccII CGCG 1 cut(s) 999
AciI CCGC 5 cut(s) 811, 1064, 1070, 1135, 1143
AclWI GGATC 2 cut(s) 437, 450
AcoI YGGCCR 2 cut(s) 830, 985
AcsI RAATTY 1 cut(s) 919
AcuI CTGAAG 1 cut(s) 305
AcyI GRCGYC 1 cut(s) 976
AfaI GTAC 3 cut(s) 284, 386, 521
AfiI CCNNNNNNNGG 6 cut(s) 221, 222, 250, 772, 850, 1059
AflIII ACRYGT 1 cut(s) 285
AgsI TTSAA 5 cut(s) 380, 558, 696, 761, 1015
AjnI CCWGG 1 cut(s) 978
AluBI AGCT 9 cut(s) 228, 237, 256, 262, 293, 740, 841, 1140, 1158
AluI AGCT 9 cut(s) 228, 237, 256, 262, 293, 740, 841, 1140, 1158
Alw21I GWGCWC 1 cut(s) 540
Alw26I GTCTC 2 cut(s) 781, 962
Alw44I GTGCAC 1 cut(s) 536
AlwI GGATC 2 cut(s) 437, 450
AlwNI CAGNNNCTG 1 cut(s) 197
AoxI GGCC 7 cut(s) 657, 812, 830, 985, 1019, 1061, 1074
ApaI GGGCCC 1 cut(s) 661
ApaLI GTGCAC 1 cut(s) 536
ApeKI GCWGC 8 cut(s) 34, 262, 299, 434, 584, 587, 1003, 1137
ApoI RAATTY 1 cut(s) 919
Asp700I GAANNNNTTC 2 cut(s) 318, 553
AspLEI GCGC 3 cut(s) 531, 978, 999
AspS9I GGNCC 5 cut(s) 657, 658, 1061, 1075, 1083
AsuC2I CCSGG 2 cut(s) 781, 834
AsuHPI GGTGA 2 cut(s) 71, 1098
AvaII GGWCC 1 cut(s) 1083
AxyI CCTNAGG 1 cut(s) 1079
BaeGI GKGCMC 2 cut(s) 540, 661
BamHI GGATCC 1 cut(s) 442
BanI GGYRCC 1 cut(s) 975
BanII GRGCYC 4 cut(s) 90, 144, 661, 735
Bbv12I GWGCWC 1 cut(s) 540
BbvI GCAGC 8 cut(s) 46, 249, 286, 446, 571, 574, 1015, 1149
BccI CCATC 4 cut(s) 99, 115, 467, 1023
BceAI ACGGC 1 cut(s) 1000
BciT130I CCWGG 1 cut(s) 980
BclI TGATCA 1 cut(s) 156
BcnI CCSGG 2 cut(s) 781, 834
BcoDI GTCTC 2 cut(s) 781, 962
BfaI CTAG 3 cut(s) 495, 651, 1155
BfmI CTRYAG 1 cut(s) 263
BfoI RGCGCY 2 cut(s) 532, 979
BglI GCCNNNNNGGC 1 cut(s) 984
BlpI GCTNAGC 1 cut(s) 993
BmcAI AGTACT 1 cut(s) 521
Bme1390I CCNGG 3 cut(s) 781, 834, 980
Bme18I GGWCC 1 cut(s) 1083
BmgT120I GGNCC 5 cut(s) 657, 658, 1061, 1075, 1083
BmiI GGNNCC 5 cut(s) 444, 658, 659, 752, 977
BmrFI CCNGG 3 cut(s) 781, 834, 980
BmrI ACTGGG 1 cut(s) 238
BmsI GCATC 1 cut(s) 203
BmuI ACTGGG 1 cut(s) 238
Bpu10I CCTNAGC 1 cut(s) 138
Bpu1102I GCTNAGC 1 cut(s) 993
BpuEI CTTGAG 2 cut(s) 104, 278
BpuMI CCSGG 2 cut(s) 781, 834
BsaHI GRCGYC 1 cut(s) 976
BsaI GGTCTC 1 cut(s) 781
BsaJI CCNNGG 5 cut(s) 438, 541, 833, 927, 1053
Bsc4I CCNNNNNNNGG 6 cut(s) 221, 222, 250, 772, 850, 1059
Bse118I RCCGGY 1 cut(s) 953
Bse1I ACTGG 4 cut(s) 244, 833, 855, 1113
Bse21I CCTNAGG 1 cut(s) 1079
Bse3DI GCAATG 2 cut(s) 26, 964
BseBI CCWGG 1 cut(s) 980
BseDI CCNNGG 5 cut(s) 438, 541, 833, 927, 1053
BseGI GGATG 4 cut(s) 91, 686, 937, 1034
BseLI CCNNNNNNNGG 6 cut(s) 221, 222, 250, 772, 850, 1059
BseMI GCAATG 2 cut(s) 26, 964
BseMII CTCAG 6 cut(s) 114, 129, 732, 741, 984, 1161
BseNI ACTGG 4 cut(s) 244, 833, 855, 1113
BseRI GAGGAG 3 cut(s) 342, 916, 1078
BseSI GKGCMC 2 cut(s) 540, 661
BseXI GCAGC 8 cut(s) 46, 249, 286, 446, 571, 574, 1015, 1149
Bsh1236I CGCG 1 cut(s) 999
BshFI GGCC 7 cut(s) 659, 814, 832, 987, 1021, 1063, 1076
BshNI GGYRCC 1 cut(s) 975
BsiHKAI GWGCWC 1 cut(s) 540
BsiSI CCGG 4 cut(s) 780, 833, 954, 1026
BslFI GGGAC 1 cut(s) 622
BslI CCNNNNNNNGG 6 cut(s) 221, 222, 250, 772, 850, 1059
BsmAI GTCTC 2 cut(s) 781, 962
BsmFI GGGAC 1 cut(s) 622
BsnI GGCC 7 cut(s) 659, 814, 832, 987, 1021, 1063, 1076
Bso31I GGTCTC 1 cut(s) 781
Bsp120I GGGCCC 1 cut(s) 657
Bsp1286I GDGCHC 5 cut(s) 90, 144, 540, 661, 735
Bsp143I GATC 3 cut(s) 156, 442, 700
Bsp1720I GCTNAGC 1 cut(s) 993
Bsp19I CCATGG 2 cut(s) 438, 1053
BspACI CCGC 5 cut(s) 811, 1064, 1070, 1135, 1143
BspANI GGCC 7 cut(s) 659, 814, 832, 987, 1021, 1063, 1076
BspCNI CTCAG 6 cut(s) 113, 130, 733, 740, 985, 1160
BspFNI CGCG 1 cut(s) 999
BspLI GGNNCC 5 cut(s) 444, 658, 659, 752, 977
BspMAI CTGCAG 1 cut(s) 267
BspPI GGATC 2 cut(s) 437, 450
BspQI GCTCTTC 1 cut(s) 424
BspT107I GGYRCC 1 cut(s) 975
BspTNI GGTCTC 1 cut(s) 781
BsrDI GCAATG 2 cut(s) 26, 964
BsrFI RCCGGY 1 cut(s) 953
BsrI ACTGG 4 cut(s) 244, 833, 855, 1113
BssAI RCCGGY 1 cut(s) 953
BssECI CCNNGG 5 cut(s) 438, 541, 833, 927, 1053
BssMI GATC 3 cut(s) 156, 442, 700
BssNI GRCGYC 1 cut(s) 976
BssT1I CCWWGG 2 cut(s) 438, 1053
Bst2UI CCWGG 1 cut(s) 980
Bst4CI ACNGT 5 cut(s) 384, 524, 542, 554, 770
Bst6I CTCTTC 2 cut(s) 381, 424
BstACI GRCGYC 1 cut(s) 976
BstC8I GCNNGC 6 cut(s) 267, 402, 874, 1001, 1023, 1068
BstDEI CTNAG 7 cut(s) 100, 138, 727, 741, 993, 1079, 1147
BstDSI CCRYGG 3 cut(s) 438, 541, 1053
BstF5I GGATG 4 cut(s) 91, 686, 937, 1034
BstFNI CGCG 1 cut(s) 999
BstH2I RGCGCY 2 cut(s) 532, 979
BstHHI GCGC 3 cut(s) 531, 978, 999
BstKTI GATC 3 cut(s) 159, 445, 703
BstMAI GTCTC 2 cut(s) 781, 962
BstMBI GATC 3 cut(s) 156, 442, 700
BstMWI GCNNNNNNNGC 9 cut(s) 234, 262, 299, 535, 581, 838, 984, 1003, 1164
BstNI CCWGG 1 cut(s) 980
BstNSI RCATGY 1 cut(s) 289
BstSCI CCNGG 3 cut(s) 779, 832, 978
BstSFI CTRYAG 1 cut(s) 263
BstSLI GKGCMC 2 cut(s) 540, 661
BstUI CGCG 1 cut(s) 999
BstV1I GCAGC 8 cut(s) 46, 249, 286, 446, 571, 574, 1015, 1149
BstX2I RGATCY 1 cut(s) 442
BstYI RGATCY 1 cut(s) 442
Bsu36I CCTNAGG 1 cut(s) 1079
BsuRI GGCC 7 cut(s) 659, 814, 832, 987, 1021, 1063, 1076
BtgI CCRYGG 3 cut(s) 438, 541, 1053
BtsCI GGATG 4 cut(s) 91, 686, 937, 1034
BtsI GCAGTG 1 cut(s) 579
BtsIMutI CAGTG 4 cut(s) 579, 775, 938, 1120
Cac8I GCNNGC 6 cut(s) 267, 402, 874, 1001, 1023, 1068
CaiI CAGNNNCTG 1 cut(s) 197
CfoI GCGC 3 cut(s) 531, 978, 999
Cfr10I RCCGGY 1 cut(s) 953
Cfr13I GGNCC 5 cut(s) 657, 658, 1061, 1075, 1083
Csp6I GTAC 3 cut(s) 283, 385, 520
CviAII CATG 7 cut(s) 38, 286, 439, 533, 803, 989, 1054
CviQI GTAC 3 cut(s) 283, 385, 520
DdeI CTNAG 7 cut(s) 100, 138, 727, 741, 993, 1079, 1147
DinI GGCGCC 1 cut(s) 977
DpnI GATC 3 cut(s) 158, 444, 702
DpnII GATC 3 cut(s) 156, 442, 700
DrdI GACNNNNNNGTC 1 cut(s) 803
DseDI GACNNNNNNGTC 1 cut(s) 803
EaeI YGGCCR 2 cut(s) 830, 985
Eam1104I CTCTTC 2 cut(s) 381, 424
EarI CTCTTC 2 cut(s) 381, 424
EciI GGCGGA 1 cut(s) 1132
Eco130I CCWWGG 2 cut(s) 438, 1053
Eco24I GRGCYC 4 cut(s) 90, 144, 661, 735
Eco31I GGTCTC 1 cut(s) 781
Eco47I GGWCC 1 cut(s) 1083
Eco57I CTGAAG 1 cut(s) 305
Eco81I CCTNAGG 1 cut(s) 1079
EcoO109I RGGNCCY 3 cut(s) 657, 1075, 1083
EcoRII CCWGG 1 cut(s) 978
EcoT14I CCWWGG 2 cut(s) 438, 1053
EcoT38I GRGCYC 4 cut(s) 90, 144, 661, 735
EgeI GGCGCC 1 cut(s) 977
EheI GGCGCC 1 cut(s) 977
ErhI CCWWGG 2 cut(s) 438, 1053
FaeI CATG 7 cut(s) 41, 289, 442, 536, 806, 992, 1057
FaiI YATR 9 cut(s) 39, 117, 287, 358, 440, 534, 804, 990, 1055
FaqI GGGAC 1 cut(s) 622
FatI CATG 7 cut(s) 37, 285, 438, 532, 802, 988, 1053
FauI CCCGC 1 cut(s) 1142
FbaI TGATCA 1 cut(s) 156
FblI GTMKAC 1 cut(s) 950
FokI GGATG 4 cut(s) 78, 673, 944, 1041
FriOI GRGCYC 4 cut(s) 90, 144, 661, 735
FspBI CTAG 3 cut(s) 495, 651, 1155
GlaI GCGC 3 cut(s) 530, 977, 998
HaeII RGCGCY 2 cut(s) 532, 979
HaeIII GGCC 7 cut(s) 659, 814, 832, 987, 1021, 1063, 1076
HapII CCGG 4 cut(s) 780, 833, 954, 1026
HhaI GCGC 3 cut(s) 531, 978, 999
Hin1I GRCGYC 1 cut(s) 976
Hin1II CATG 7 cut(s) 41, 289, 442, 536, 806, 992, 1057
Hin6I GCGC 3 cut(s) 529, 976, 997
HinP1I GCGC 3 cut(s) 529, 976, 997
HinfI GANTC 2 cut(s) 41, 182
HpaII CCGG 4 cut(s) 780, 833, 954, 1026
HphI GGTGA 2 cut(s) 71, 1098
Hpy166II GTNNAC 2 cut(s) 538, 951
Hpy188I TCNGA 8 cut(s) 46, 103, 181, 516, 730, 796, 931, 1150
Hpy188III TCNNGA 6 cut(s) 137, 311, 331, 446, 495, 558
Hpy8I GTNNAC 2 cut(s) 538, 951
HpyAV CCTTC 3 cut(s) 350, 459, 702
HpyCH4III ACNGT 5 cut(s) 384, 524, 542, 554, 770
HpyCH4V TGCA 6 cut(s) 62, 250, 265, 412, 538, 860
HpyF10VI GCNNNNNNNGC 9 cut(s) 234, 262, 299, 535, 581, 838, 984, 1003, 1164
HpyF3I CTNAG 7 cut(s) 100, 138, 727, 741, 993, 1079, 1147
Hsp92I GRCGYC 1 cut(s) 976
Hsp92II CATG 7 cut(s) 41, 289, 442, 536, 806, 992, 1057
HspAI GCGC 3 cut(s) 529, 976, 997
KasI GGCGCC 1 cut(s) 975
Ksp22I TGATCA 1 cut(s) 156
Kzo9I GATC 3 cut(s) 156, 442, 700
LguI GCTCTTC 1 cut(s) 424
LmnI GCTCC 5 cut(s) 225, 253, 750, 846, 1145
Lsp1109I GCAGC 8 cut(s) 46, 249, 286, 446, 571, 574, 1015, 1149
LweI GCATC 1 cut(s) 203
MaeI CTAG 3 cut(s) 495, 651, 1155
MaeIII GTNAC 1 cut(s) 936
MalI GATC 3 cut(s) 158, 444, 702
MboI GATC 3 cut(s) 156, 442, 700
MboII GAAGA 3 cut(s) 311, 368, 441
MfeI CAATTG 2 cut(s) 696, 1010
MflI RGATCY 1 cut(s) 442
MhlI GDGCHC 5 cut(s) 90, 144, 540, 661, 735
MluCI AATT 6 cut(s) 696, 919, 944, 1010, 1015, 1099
Mly113I GGCGCC 1 cut(s) 976
MlyI GAGTC 1 cut(s) 50
MmeI TCCRAC 2 cut(s) 819, 1116
MroXI GAANNNNTTC 2 cut(s) 318, 553
MspI CCGG 4 cut(s) 780, 833, 954, 1026
MspR9I CCNGG 3 cut(s) 781, 834, 980
MunI CAATTG 2 cut(s) 696, 1010
MvaI CCWGG 1 cut(s) 980
MvnI CGCG 1 cut(s) 999
MwoI GCNNNNNNNGC 9 cut(s) 234, 262, 299, 535, 581, 838, 984, 1003, 1164
NarI GGCGCC 1 cut(s) 976
NciI CCSGG 2 cut(s) 781, 834
NcoI CCATGG 2 cut(s) 438, 1053
NdeII GATC 3 cut(s) 156, 442, 700
NlaIII CATG 7 cut(s) 41, 289, 442, 536, 806, 992, 1057
NlaIV GGNNCC 5 cut(s) 444, 658, 659, 752, 977
NmuCI GTSAC 1 cut(s) 936
NspI RCATGY 1 cut(s) 289
PciI ACATGT 1 cut(s) 285
PciSI GCTCTTC 1 cut(s) 424
PdmI GAANNNNTTC 2 cut(s) 318, 553
PfeI GAWTC 1 cut(s) 182
PflMI CCANNNNNTGG 1 cut(s) 850
PfoI TCCNGGA 1 cut(s) 779
PleI GAGTC 1 cut(s) 49
PluTI GGCGCC 1 cut(s) 979
PpsI GAGTC 1 cut(s) 49
PpuMI RGGWCCY 1 cut(s) 1083
PscI ACATGT 1 cut(s) 285
Psp5II RGGWCCY 1 cut(s) 1083
Psp6I CCWGG 1 cut(s) 978
PspGI CCWGG 1 cut(s) 978
PspN4I GGNNCC 5 cut(s) 444, 658, 659, 752, 977
PspOMI GGGCCC 1 cut(s) 657
PspPI GGNCC 5 cut(s) 657, 658, 1061, 1075, 1083
PspPPI RGGWCCY 1 cut(s) 1083
PstI CTGCAG 1 cut(s) 267
PstNI CAGNNNCTG 1 cut(s) 197
PsuI RGATCY 1 cut(s) 442
RsaI GTAC 3 cut(s) 284, 386, 521
RsaNI GTAC 3 cut(s) 283, 385, 520
SapI GCTCTTC 1 cut(s) 424
Sau3AI GATC 3 cut(s) 156, 442, 700
Sau96I GGNCC 5 cut(s) 657, 658, 1061, 1075, 1083
ScaI AGTACT 1 cut(s) 521
SchI GAGTC 1 cut(s) 50
ScrFI CCNGG 3 cut(s) 781, 834, 980
SduI GDGCHC 5 cut(s) 90, 144, 540, 661, 735
SfaNI GCATC 1 cut(s) 203
SfcI CTRYAG 1 cut(s) 263
SfoI GGCGCC 1 cut(s) 977
SinI GGWCC 1 cut(s) 1083
SmlI CTYRAG 3 cut(s) 14, 83, 257
SmoI CTYRAG 3 cut(s) 14, 83, 257
Sse9I AATT 6 cut(s) 696, 919, 944, 1010, 1015, 1099
SsiI CCGC 5 cut(s) 811, 1064, 1070, 1135, 1143
SspDI GGCGCC 1 cut(s) 975
SspMI CTAG 3 cut(s) 495, 651, 1155
StyD4I CCNGG 3 cut(s) 779, 832, 978
StyI CCWWGG 2 cut(s) 438, 1053
TaaI ACNGT 5 cut(s) 384, 524, 542, 554, 770
TaqI TCGA 1 cut(s) 908
TasI AATT 6 cut(s) 696, 919, 944, 1010, 1015, 1099
TatI WGTACW 1 cut(s) 519
TauI GCSGC 2 cut(s) 814, 1066
TfiI GAWTC 1 cut(s) 182
TscAI CASTG 4 cut(s) 586, 775, 945, 1120
TseFI GTSAC 1 cut(s) 936
TseI GCWGC 8 cut(s) 34, 262, 299, 434, 584, 587, 1003, 1137
Tsp45I GTSAC 1 cut(s) 936
TspDTI ATGAA 2 cut(s) 698, 896
TspRI CASTG 4 cut(s) 586, 775, 945, 1120
Van91I CCANNNNNTGG 1 cut(s) 850
VneI GTGCAC 1 cut(s) 536
VpaK11BI GGWCC 1 cut(s) 1083
XapI RAATTY 1 cut(s) 919
XbaI TCTAGA 1 cut(s) 494
XceI RCATGY 1 cut(s) 289
XcmI CCANNNNNNNNNTGG 2 cut(s) 539, 1014
XmiI GTMKAC 1 cut(s) 950
XmnI GAANNNNTTC 2 cut(s) 318, 553
XspI CTAG 3 cut(s) 495, 651, 1155
ZrmI AGTACT 1 cut(s) 521
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.