Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0012002

Physical Location & Seq

Genomic Coordinates Reverse (-)

15116974 .. 15118821

Gene Structure 1848 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG172100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1215 bp

ATGGACTTTCATCTCAAGCAATGGAGAAACCAGCAGCATGAGTCAGAGGAACAACAGCCCTATTCTTCTGCTACAAAGATACCAAAACTTGAGCACCTTCAGACCCAAACACACCCTGAACCAGCTTCCGGGTATGCTCTCCCTTTGTTTGTACCTGAACCAAACACCAAAGTCATCAGCAACCTGTCAGCATTTTCTGAATCTACTACTCCTACACCAGCTTCTTCTGCCACCAGATTTCCCAGGATGGGGAGCTACTTCAGCATGAGCCAGTGGCAAGAGCTTGAGCTGCAGGCTTTGATATTCAGGTACATGCTGGCTGGTGCTGCTGTTCCTCCTGAGCTTCTTCAGCCAATCAAGAGAAGCCTTCTGCATTCGCAATTCTTCTTCCACCACCCTCTTCAACAGTACCCTGCTTTGTTGCAATCTGGGTACTGGGGAAGAGGGGCCATGGATCCAGAGCCGACCAGGTGCCGGAGGACAGATGGCAAGAAATGGCGGTGCTCTCGAGACGTAGTGACCGGTCAGAAGTACTGCGAGCGCCACGTGCACCGCGGACGAAACCGTTCAAGAAAGCATGTGGAAGTCACCACCACCGCCACCGCCACCACAACCACAACCGCCGCCGGAGGAGGAGGAGTAAGGACTCTTGATGCTGCTACCAGCAACGCAGTCGTTACTGTTGCCTCAACGTTGGGAAATGGGTCGGATGGGACCCATTTCGCTCTTTCCGGGTCTTCCCCTTCCATCGATCTGCTCCAGCTCAAACAAAGCTCTTTGGAGTCCAAACATGAGAACAAGAGCTTCTTTGATAACCGCAGGGAGGTTTCGGGGTCTATTCAATCCGACAATCATATCTTGCGGCCTTTTTTCGATGATTGGCCGGGACAGCTCCAAGAACCAGACAATGGGAGAGGCAATGCTAGCTCAATGAACTCTGCCACCTCCCTCTCCATTTCAATACGTGGAAACACATCATCATCAGATGTGTCGTTGAAGTTGTCTACCGGCAATGGAGTAGAACCAGGCCAAGAGAGTGAACAGCCGCAATTGAATTGGCCAACGGGATGGGGGACAAACCATGTGGCTTCAATGGGAGGGCCTCTTGCAGAGGCTCTGCGTTCCTCCAACTCCAACTCCAACTCCTCACCGACCAGTGTTCTTCATCGGTTGCCTCGTGGCTCTGTCAATGAAACTAGCTTCATCAGCACCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0007275 GO:0008150 GO:0008285 GO:0009605 GO:0009607 GO:0009624 GO:0022622 GO:0032501 GO:0032502 GO:0042127 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0048364 GO:0048366 GO:0048367 GO:0048519 GO:0048523 GO:0048580 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051704 GO:0051707 GO:0061062 GO:0065007 GO:0097159 GO:0099402 GO:1901363 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

QLQ WRC

Protein Analysis

404

Amino Acids

44.29

Weight (kDa)

8.72

Isoelectric Point (pI)

52.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
QLQ	PF08880	87 - 119	1.4e-13	QLQ
WRC	PF08879	153 - 195	1.9e-20	WRC

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012002)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36400 AT3G52910
fragaria_vesca	FvH4_6g18130
malus_domestica	MD12G1020500.v1.1 MD14G1017600.v1.1
prunus_persica	Prupe.7G115500_v2.0.a1 Prupe.7G115500_v2.0.a1
pyrus_communis	pycom14g01600
rosa_chinensis	RchiOBHm_Chr3g0472411
rosa_laevigata	RLG00000024082
rosa_multiflora	Rmu_sc0001096.1_g000014
rosa_roxburghii	Rroxscaffold_6G00408940
rosa_rugosa	Rorug03G0124600
rosa_samantha	Rh3AG177000 Rh3BG203000 Rh3CG193300 Rh3CG200500 Rh3DG172100
rosa_wichuraiana	Rw3G016450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	471
AccB7I	CCANNNNNTGG	1 cut(s)	908
AccI	GTMKAC	1 cut(s)	1004
AccII	CGCG	1 cut(s)	555
AclI	AACGTT	1 cut(s)	692
AclWI	GGATC	2 cut(s)	449, 462
AcoI	YGGCCR	2 cut(s)	881, 1058
AcuI	CTGAAG	3 cut(s)	83, 244, 332
AcvI	CACGTG	1 cut(s)	547
AfaI	GTAC	5 cut(s)	153, 311, 410, 434, 533
AfiI	CCNNNNNNNGG	6 cut(s)	128, 248, 249, 474, 823, 908
AgeI	ACCGGT	1 cut(s)	521
AgsI	TTSAA	7 cut(s)	404, 570, 842, 960, 997, 1054, 1092
AjnI	CCWGG	3 cut(s)	242, 467, 1024
Alw21I	GWGCWC	3 cut(s)	96, 506, 552
Alw26I	GTCTC	1 cut(s)	504
Alw44I	GTGCAC	1 cut(s)	548
AlwI	GGATC	2 cut(s)	449, 462
AlwNI	CAGNNNCTG	1 cut(s)	1212
Ama87I	CYCGRG	1 cut(s)	507
AoxI	GGCC	6 cut(s)	447, 863, 881, 1027, 1058, 1100
ApaLI	GTGCAC	1 cut(s)	548
ApeKI	GCWGC	4 cut(s)	34, 289, 326, 656
AsiGI	ACCGGT	1 cut(s)	521
Asp700I	GAANNNNTTC	1 cut(s)	565
AspLEI	GCGC	1 cut(s)	543
AspS9I	GGNCC	3 cut(s)	447, 714, 1100
AsuC2I	CCSGG	3 cut(s)	130, 733, 885
AsuHPI	GGTGA	2 cut(s)	580, 1140
AsuNHI	GCTAGC	1 cut(s)	923
AvaI	CYCGRG	1 cut(s)	507
AvaII	GGWCC	1 cut(s)	714
BaeGI	GKGCMC	1 cut(s)	552
BalI	TGGCCA	1 cut(s)	1060
BamHI	GGATCC	1 cut(s)	454
BanI	GGYRCC	1 cut(s)	471
BauI	CACGAG	1 cut(s)	1176
BbrPI	CACGTG	1 cut(s)	547
BbsI	GAAGAC	1 cut(s)	729
Bbv12I	GWGCWC	3 cut(s)	96, 506, 552
BbvI	GCAGC	4 cut(s)	46, 276, 313, 643
BccI	CCATC	5 cut(s)	241, 479, 704, 755, 1062
BcgI	CGANNNNNNTGC	2 cut(s)	655, 689
BciT130I	CCWGG	3 cut(s)	244, 469, 1026
BcnI	CCSGG	3 cut(s)	130, 733, 885
BcoDI	GTCTC	1 cut(s)	504
BfaI	CTAG	2 cut(s)	924, 1197
BfmI	CTRYAG	1 cut(s)	290
BfoI	RGCGCY	1 cut(s)	544
BisI	GCNGC	7 cut(s)	35, 290, 327, 624, 657, 863, 1046
BlsI	GCNGC	7 cut(s)	36, 291, 328, 625, 658, 864, 1047
BmcAI	AGTACT	1 cut(s)	533
Bme1390I	CCNGG	6 cut(s)	130, 244, 469, 733, 885, 1026
Bme18I	GGWCC	1 cut(s)	714
BmeT110I	CYCGRG	1 cut(s)	507
BmgT120I	GGNCC	3 cut(s)	447, 714, 1100
BmiI	GGNNCC	5 cut(s)	448, 456, 473, 715, 716
BmrFI	CCNGG	6 cut(s)	130, 244, 469, 733, 885, 1026
BmrI	ACTGGG	1 cut(s)	445
BmsI	GCATC	1 cut(s)	643
BmtI	GCTAGC	1 cut(s)	927
BmuI	ACTGGG	1 cut(s)	445
BpiI	GAAGAC	1 cut(s)	729
BpmI	CTGGAG	1 cut(s)	743
Bpu10I	CCTNAGC	1 cut(s)	339
BpuEI	CTTGAG	2 cut(s)	110, 305
BpuMI	CCSGG	3 cut(s)	130, 733, 885
Bsa29I	ATCGAT	1 cut(s)	750
BsaAI	YACGTR	2 cut(s)	547, 965
BsaJI	CCNNGG	3 cut(s)	242, 450, 553
BsaWI	WCCGGW	1 cut(s)	521
BsaXI	ACNNNNNCTCC	6 cut(s)	624, 654, 1121, 1127, 1151, 1157
Bsc4I	CCNNNNNNNGG	6 cut(s)	128, 248, 249, 474, 823, 908
Bse118I	RCCGGY	2 cut(s)	521, 1007
Bse1I	ACTGG	3 cut(s)	271, 440, 1155
Bse3DI	GCAATG	3 cut(s)	26, 925, 1018
BseBI	CCWGG	3 cut(s)	244, 469, 1026
BseCI	ATCGAT	1 cut(s)	750
BseDI	CCNNGG	3 cut(s)	242, 450, 553
BseGI	GGATG	3 cut(s)	252, 715, 1073
BseLI	CCNNNNNNNGG	6 cut(s)	128, 248, 249, 474, 823, 908
BseMI	GCAATG	3 cut(s)	26, 925, 1018
BseMII	CTCAG	1 cut(s)	330
BseNI	ACTGG	3 cut(s)	271, 440, 1155
BseRI	GAGGAG	4 cut(s)	645, 648, 651, 1135
BseSI	GKGCMC	1 cut(s)	552
BseXI	GCAGC	4 cut(s)	46, 276, 313, 643
Bsh1236I	CGCG	1 cut(s)	555
BshFI	GGCC	6 cut(s)	449, 865, 883, 1029, 1060, 1102
BshNI	GGYRCC	1 cut(s)	471
BshTI	ACCGGT	1 cut(s)	521
BshVI	ATCGAT	1 cut(s)	750
BsiHKAI	GWGCWC	3 cut(s)	96, 506, 552
BsiHKCI	CYCGRG	1 cut(s)	507
BsiSI	CCGG	7 cut(s)	129, 475, 522, 627, 732, 884, 1008
BslFI	GGGAC	3 cut(s)	727, 900, 1087
BslI	CCNNNNNNNGG	6 cut(s)	128, 248, 249, 474, 823, 908
BsmAI	GTCTC	1 cut(s)	504
BsmBI	CGTCTC	1 cut(s)	504
BsmFI	GGGAC	3 cut(s)	727, 900, 1087
BsmI	GAATGC	1 cut(s)	373
BsnI	GGCC	6 cut(s)	449, 865, 883, 1029, 1060, 1102
BsoBI	CYCGRG	1 cut(s)	507
Bsp1286I	GDGCHC	3 cut(s)	96, 506, 552
Bsp143I	GATC	2 cut(s)	454, 751
Bsp19I	CCATGG	1 cut(s)	450
BspANI	GGCC	6 cut(s)	449, 865, 883, 1029, 1060, 1102
BspCNI	CTCAG	1 cut(s)	331
BspDI	ATCGAT	1 cut(s)	750
BspFNI	CGCG	1 cut(s)	555
BspLI	GGNNCC	5 cut(s)	448, 456, 473, 715, 716
BspMAI	CTGCAG	1 cut(s)	294
BspOI	GCTAGC	1 cut(s)	927
BspPI	GGATC	2 cut(s)	449, 462
BspT107I	GGYRCC	1 cut(s)	471
BsrDI	GCAATG	3 cut(s)	26, 925, 1018
BsrFI	RCCGGY	2 cut(s)	521, 1007
BsrI	ACTGG	3 cut(s)	271, 440, 1155
BssAI	RCCGGY	2 cut(s)	521, 1007
BssECI	CCNNGG	3 cut(s)	242, 450, 553
BssMI	GATC	2 cut(s)	454, 751
BssSI	CACGAG	1 cut(s)	1176
BssT1I	CCWWGG	1 cut(s)	450
Bst2BI	CACGAG	1 cut(s)	1176
Bst2UI	CCWGG	3 cut(s)	244, 469, 1026
Bst4CI	ACNGT	3 cut(s)	408, 566, 682
Bst6I	CTCTTC	2 cut(s)	405, 436
BstBAI	YACGTR	2 cut(s)	547, 965
BstC8I	GCNNGC	4 cut(s)	294, 318, 539, 925
BstDEI	CTNAG	1 cut(s)	339
BstDSI	CCRYGG	2 cut(s)	450, 553
BstF5I	GGATG	3 cut(s)	252, 715, 1073
BstFNI	CGCG	1 cut(s)	555
BstH2I	RGCGCY	1 cut(s)	544
BstHHI	GCGC	1 cut(s)	543
BstKTI	GATC	2 cut(s)	457, 754
BstMAI	GTCTC	1 cut(s)	504
BstMBI	GATC	2 cut(s)	454, 751
BstMWI	GCNNNNNNNGC	9 cut(s)	227, 261, 289, 326, 349, 547, 889, 924, 1206
BstNI	CCWGG	3 cut(s)	244, 469, 1026
BstNSI	RCATGY	2 cut(s)	316, 581
BstSCI	CCNGG	6 cut(s)	128, 242, 467, 731, 883, 1024
BstSFI	CTRYAG	1 cut(s)	290
BstSLI	GKGCMC	1 cut(s)	552
BstUI	CGCG	1 cut(s)	555
BstV1I	GCAGC	4 cut(s)	46, 276, 313, 643
BstV2I	GAAGAC	1 cut(s)	729
BstX2I	RGATCY	1 cut(s)	454
BstXI	CCANNNNNNTGG	1 cut(s)	1068
BstYI	RGATCY	1 cut(s)	454
Bsu15I	ATCGAT	1 cut(s)	750
BsuRI	GGCC	6 cut(s)	449, 865, 883, 1029, 1060, 1102
BsuTUI	ATCGAT	1 cut(s)	750
BtgI	CCRYGG	2 cut(s)	450, 553
BtsCI	GGATG	3 cut(s)	252, 715, 1073
BtsIMutI	CAGTG	2 cut(s)	278, 1162
Cac8I	GCNNGC	4 cut(s)	294, 318, 539, 925
CaiI	CAGNNNCTG	1 cut(s)	1212
CfoI	GCGC	1 cut(s)	543
Cfr10I	RCCGGY	2 cut(s)	521, 1007
Cfr13I	GGNCC	3 cut(s)	447, 714, 1100
Cfr42I	CCGCGG	1 cut(s)	556
ClaI	ATCGAT	1 cut(s)	750
CsiI	ACCWGGT	1 cut(s)	467
Csp6I	GTAC	5 cut(s)	152, 310, 409, 433, 532
CspAI	ACCGGT	1 cut(s)	521
CspCI	CAANNNNNGTGG	2 cut(s)	1065, 1100
CviAII	CATG	7 cut(s)	38, 265, 313, 451, 578, 791, 1082
CviQI	GTAC	5 cut(s)	152, 310, 409, 433, 532
DdeI	CTNAG	1 cut(s)	339
DpnI	GATC	2 cut(s)	456, 753
DpnII	GATC	2 cut(s)	454, 751
EaeI	YGGCCR	2 cut(s)	881, 1058
Eam1104I	CTCTTC	2 cut(s)	405, 436
EarI	CTCTTC	2 cut(s)	405, 436
Eco130I	CCWWGG	1 cut(s)	450
Eco47I	GGWCC	1 cut(s)	714
Eco57I	CTGAAG	3 cut(s)	83, 244, 332
Eco72I	CACGTG	1 cut(s)	547
Eco88I	CYCGRG	1 cut(s)	507
EcoO109I	RGGNCCY	2 cut(s)	714, 1100
EcoRII	CCWGG	3 cut(s)	242, 467, 1024
EcoT14I	CCWWGG	1 cut(s)	450
ErhI	CCWWGG	1 cut(s)	450
Esp3I	CGTCTC	1 cut(s)	504
FaeI	CATG	7 cut(s)	41, 268, 316, 454, 581, 794, 1085
FaiI	YATR	9 cut(s)	39, 135, 266, 314, 452, 579, 792, 855, 1083
FalI	AAGNNNNNCTT	2 cut(s)	791, 823
FaqI	GGGAC	3 cut(s)	727, 900, 1087
FatI	CATG	7 cut(s)	37, 264, 312, 450, 577, 790, 1081
FblI	GTMKAC	1 cut(s)	1004
Fnu4HI	GCNGC	7 cut(s)	35, 290, 327, 624, 657, 863, 1046
FokI	GGATG	3 cut(s)	259, 722, 1080
Fsp4HI	GCNGC	7 cut(s)	35, 290, 327, 624, 657, 863, 1046
FspBI	CTAG	2 cut(s)	924, 1197
GlaI	GCGC	1 cut(s)	542
GluI	GCNGC	7 cut(s)	35, 290, 327, 624, 657, 863, 1046
GsuI	CTGGAG	1 cut(s)	743
HaeII	RGCGCY	1 cut(s)	544
HaeIII	GGCC	6 cut(s)	449, 865, 883, 1029, 1060, 1102
HapII	CCGG	7 cut(s)	129, 475, 522, 627, 732, 884, 1008
HhaI	GCGC	1 cut(s)	543
Hin1II	CATG	7 cut(s)	41, 268, 316, 454, 581, 794, 1085
Hin6I	GCGC	1 cut(s)	541
HinP1I	GCGC	1 cut(s)	541
HinfI	GANTC	4 cut(s)	41, 200, 646, 782
HpaII	CCGG	7 cut(s)	129, 475, 522, 627, 732, 884, 1008
HphI	GGTGA	2 cut(s)	580, 1140
Hpy166II	GTNNAC	3 cut(s)	550, 1005, 1040
Hpy188I	TCNGA	7 cut(s)	46, 102, 199, 528, 709, 847, 985
Hpy188III	TCNNGA	7 cut(s)	338, 358, 458, 507, 509, 570, 650
Hpy8I	GTNNAC	3 cut(s)	550, 1005, 1040
HpyAV	CCTTC	3 cut(s)	107, 377, 753
HpyCH4III	ACNGT	3 cut(s)	408, 566, 682
HpyCH4IV	ACGT	4 cut(s)	513, 546, 692, 964
HpyCH4V	TGCA	5 cut(s)	292, 373, 424, 550, 1109
HpyF10VI	GCNNNNNNNGC	9 cut(s)	227, 261, 289, 326, 349, 547, 889, 924, 1206
HpyF3I	CTNAG	1 cut(s)	339
HpySE526I	ACGT	4 cut(s)	513, 546, 692, 964
Hsp92II	CATG	7 cut(s)	41, 268, 316, 454, 581, 794, 1085
HspAI	GCGC	1 cut(s)	541
KflI	GGGWCCC	1 cut(s)	714
KspI	CCGCGG	1 cut(s)	556
Kzo9I	GATC	2 cut(s)	454, 751
LmnI	GCTCC	3 cut(s)	252, 762, 897
Lsp1109I	GCAGC	4 cut(s)	46, 276, 313, 643
LweI	GCATC	1 cut(s)	643
MabI	ACCWGGT	1 cut(s)	467
MaeI	CTAG	2 cut(s)	924, 1197
MaeII	ACGT	4 cut(s)	513, 546, 692, 964
MaeIII	GTNAC	3 cut(s)	517, 586, 676
MalI	GATC	2 cut(s)	456, 753
MboI	GATC	2 cut(s)	454, 751
MboII	GAAGA	9 cut(s)	57, 216, 338, 376, 379, 392, 453, 729, 1154
MfeI	CAATTG	1 cut(s)	1049
MflI	RGATCY	1 cut(s)	454
MhlI	GDGCHC	3 cut(s)	96, 506, 552
MlsI	TGGCCA	1 cut(s)	1060
MluCI	AATT	3 cut(s)	380, 1049, 1054
MluNI	TGGCCA	1 cut(s)	1060
MlyI	GAGTC	3 cut(s)	50, 640, 791
MmeI	TCCRAC	5 cut(s)	687, 870, 1152, 1158, 1164
Mox20I	TGGCCA	1 cut(s)	1060
MroXI	GAANNNNTTC	1 cut(s)	565
MscI	TGGCCA	1 cut(s)	1060
Msp20I	TGGCCA	1 cut(s)	1060
MspA1I	CMGCKG	1 cut(s)	555
MspI	CCGG	7 cut(s)	129, 475, 522, 627, 732, 884, 1008
MspR9I	CCNGG	6 cut(s)	130, 244, 469, 733, 885, 1026
MunI	CAATTG	1 cut(s)	1049
Mva1269I	GAATGC	1 cut(s)	373
MvaI	CCWGG	3 cut(s)	244, 469, 1026
MvnI	CGCG	1 cut(s)	555
MwoI	GCNNNNNNNGC	9 cut(s)	227, 261, 289, 326, 349, 547, 889, 924, 1206
NciI	CCSGG	3 cut(s)	130, 733, 885
NcoI	CCATGG	1 cut(s)	450
NdeII	GATC	2 cut(s)	454, 751
NheI	GCTAGC	1 cut(s)	923
NlaIII	CATG	7 cut(s)	41, 268, 316, 454, 581, 794, 1085
NlaIV	GGNNCC	5 cut(s)	448, 456, 473, 715, 716
NmuCI	GTSAC	2 cut(s)	517, 586
NspI	RCATGY	2 cut(s)	316, 581
PaeR7I	CTCGAG	1 cut(s)	507
PcsI	WCGNNNNNNNCGW	1 cut(s)	1174
PctI	GAATGC	1 cut(s)	373
PdmI	GAANNNNTTC	1 cut(s)	565
PfeI	GAWTC	1 cut(s)	200
PflMI	CCANNNNNTGG	1 cut(s)	908
PinAI	ACCGGT	1 cut(s)	521
PkrI	GCNGC	7 cut(s)	36, 291, 328, 625, 658, 864, 1047
PleI	GAGTC	3 cut(s)	49, 640, 790
PmaCI	CACGTG	1 cut(s)	547
PmlI	CACGTG	1 cut(s)	547
PpsI	GAGTC	3 cut(s)	49, 640, 790
Ppu21I	YACGTR	2 cut(s)	547, 965
PpuMI	RGGWCCY	1 cut(s)	714
Psp1406I	AACGTT	1 cut(s)	692
Psp5II	RGGWCCY	1 cut(s)	714
Psp6I	CCWGG	3 cut(s)	242, 467, 1024
PspCI	CACGTG	1 cut(s)	547
PspGI	CCWGG	3 cut(s)	242, 467, 1024
PspN4I	GGNNCC	5 cut(s)	448, 456, 473, 715, 716
PspPI	GGNCC	3 cut(s)	447, 714, 1100
PspPPI	RGGWCCY	1 cut(s)	714
PstI	CTGCAG	1 cut(s)	294
PstNI	CAGNNNCTG	1 cut(s)	1212
PsuI	RGATCY	1 cut(s)	454
RsaI	GTAC	5 cut(s)	153, 311, 410, 434, 533
RsaNI	GTAC	5 cut(s)	152, 310, 409, 433, 532
SacII	CCGCGG	1 cut(s)	556
SatI	GCNGC	7 cut(s)	35, 290, 327, 624, 657, 863, 1046
Sau3AI	GATC	2 cut(s)	454, 751
Sau96I	GGNCC	3 cut(s)	447, 714, 1100
ScaI	AGTACT	1 cut(s)	533
SchI	GAGTC	3 cut(s)	50, 640, 791
ScrFI	CCNGG	6 cut(s)	130, 244, 469, 733, 885, 1026
SduI	GDGCHC	3 cut(s)	96, 506, 552
SexAI	ACCWGGT	1 cut(s)	467
SfaNI	GCATC	1 cut(s)	643
SfcI	CTRYAG	1 cut(s)	290
Sfr274I	CTCGAG	1 cut(s)	507
Sfr303I	CCGCGG	1 cut(s)	556
SgrBI	CCGCGG	1 cut(s)	556
SinI	GGWCC	1 cut(s)	714
SlaI	CTCGAG	1 cut(s)	507
SmlI	CTYRAG	4 cut(s)	14, 89, 284, 507
SmoI	CTYRAG	4 cut(s)	14, 89, 284, 507
Sse9I	AATT	3 cut(s)	380, 1049, 1054
SspMI	CTAG	2 cut(s)	924, 1197
StyD4I	CCNGG	6 cut(s)	128, 242, 467, 731, 883, 1024
StyI	CCWWGG	1 cut(s)	450
TaaI	ACNGT	3 cut(s)	408, 566, 682
TaiI	ACGT	4 cut(s)	516, 549, 695, 967
TaqI	TCGA	3 cut(s)	508, 750, 873
TasI	AATT	3 cut(s)	380, 1049, 1054
TatI	WGTACW	1 cut(s)	531
TauI	GCSGC	3 cut(s)	626, 865, 1048
TfiI	GAWTC	1 cut(s)	200
TscAI	CASTG	2 cut(s)	278, 1162
TseFI	GTSAC	2 cut(s)	517, 586
TseI	GCWGC	4 cut(s)	34, 289, 326, 656
Tsp45I	GTSAC	2 cut(s)	517, 586
TspDTI	ATGAA	4 cut(s)	947, 1154, 1192, 1206
TspRI	CASTG	2 cut(s)	278, 1162
Van91I	CCANNNNNTGG	1 cut(s)	908
VneI	GTGCAC	1 cut(s)	548
VpaK11BI	GGWCC	1 cut(s)	714
XceI	RCATGY	2 cut(s)	316, 581
XhoI	CTCGAG	1 cut(s)	507
XmiI	GTMKAC	1 cut(s)	1004
XmnI	GAANNNNTTC	1 cut(s)	565
XspI	CTAG	2 cut(s)	924, 1197
ZrmI	AGTACT	1 cut(s)	533

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.