Rmu_sc0001096.1_g000014

Growth-regulating factor

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001096.1
Physical Location & Seq
Forward (+)
45600 .. 47530
1931 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001096.1_g000014.1.cds

Sequence Viewer

Length: 1296 bp
atggactttcatctcaagcaatggagaaaccagcagcatgagtcagaggaacaacagccctattcttctgctacaaagataccaaaacttgagcaccttcagacccaaacacaccctgaaccagcttccgggtatgctctccctttgtttgtacctgaaccaaacaccaaagtcatcagcaacctgtcagcattttctgaatctactactcctacaccagcttcttctgccaccagatttcccaggatggggagctacttcagcatgagtcagtggcaagagcttgagctgcaggctttgatattcaggtacatgctggctggtgctgctgttcctcctgagcttcttcagccaatcaagagaagccttctgcattcgcaattcttcttccaccactctcttcaacagtaccctgctttgttgcaatctgggtactggggaagaggggccatggatccagagccgaccaggtgccggaggacagatggcaagaaatggcggtgctctcgagacgtagtgaccggtcagaagtactgcgagcgccacgtgcaccgcggacgaaaccgttcaagaaagcatgtggaagtcaccaccgccaccacaaccacaaccgccgccggaggaggagtaaggactcttgatgctgctaccaccaaggcagtcgttactgttgcctcatcgttgggaaatgggtcggatgggacccattttgctctttccgggtcgtccccttccatcgatctgctccagctcaaacaaagctctttggagtccaaacatgagaacaagagcttctttgataaccgcagggaggtttcgggaggtattcaatccgacaatcatatcttgcggccttttttcgatgattggccgggacagctccaagaaccgcacaatgggagaggcaatgctagctcaatgaactctgccacctccctctccatttcaatacgtggaaacacatcatcatcagatgtgtcgttgaagttgtctaccggcaatggagtagagccaggccaagagagtgaacagccgcaattgaattggccaacgggatgggggacaaaccatatggcttcaatgggagggccgcttgcagaggctctgcgttcctccaactccaactccaactccaactccaactcctcaccgaccagtgttcttcatcggttgcctcgtggctctgtcaatgaaactagcttcatctcttgcagaggctctgcgttcctccaactccaactccaactcctcaccgaccagtgttcttcatcggttgcctcgtggctctgtcaatga

Protein Analysis

431

Amino Acids

47.36

Weight (kDa)

8.87

Isoelectric Point (pI)

55.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012002)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 471
AccI GTMKAC 1 cut(s) 992
AccII CGCG 1 cut(s) 555
AclWI GGATC 2 cut(s) 449, 462
AcoI YGGCCR 2 cut(s) 869, 1046
AcuI CTGAAG 3 cut(s) 83, 244, 332
AcvI CACGTG 1 cut(s) 547
AfaI GTAC 5 cut(s) 153, 311, 410, 434, 533
AfiI CCNNNNNNNGG 6 cut(s) 128, 248, 249, 474, 811, 896
AgeI ACCGGT 1 cut(s) 521
AgsI TTSAA 7 cut(s) 404, 570, 830, 948, 985, 1042, 1080
AjnI CCWGG 3 cut(s) 242, 467, 1012
Alw21I GWGCWC 3 cut(s) 96, 506, 552
Alw26I GTCTC 1 cut(s) 504
Alw44I GTGCAC 1 cut(s) 548
AlwI GGATC 2 cut(s) 449, 462
Ama87I CYCGRG 1 cut(s) 507
AoxI GGCC 6 cut(s) 447, 851, 869, 1015, 1046, 1088
ApaLI GTGCAC 1 cut(s) 548
ApeKI GCWGC 4 cut(s) 34, 289, 326, 644
AsiGI ACCGGT 1 cut(s) 521
Asp700I GAANNNNTTC 1 cut(s) 565
AspLEI GCGC 1 cut(s) 543
AspS9I GGNCC 3 cut(s) 447, 702, 1088
AsuC2I CCSGG 3 cut(s) 130, 721, 873
AsuHPI GGTGA 3 cut(s) 580, 1140, 1243
AsuNHI GCTAGC 1 cut(s) 911
AvaI CYCGRG 1 cut(s) 507
AvaII GGWCC 1 cut(s) 702
BaeGI GKGCMC 1 cut(s) 552
BalI TGGCCA 1 cut(s) 1048
BamHI GGATCC 1 cut(s) 454
BanI GGYRCC 1 cut(s) 471
BauI CACGAG 2 cut(s) 1176, 1279
BbrPI CACGTG 1 cut(s) 547
Bbv12I GWGCWC 3 cut(s) 96, 506, 552
BbvI GCAGC 4 cut(s) 46, 276, 313, 631
BccI CCATC 5 cut(s) 241, 479, 692, 743, 1050
BciT130I CCWGG 3 cut(s) 244, 469, 1014
BcnI CCSGG 3 cut(s) 130, 721, 873
BcoDI GTCTC 1 cut(s) 504
BfaI CTAG 2 cut(s) 912, 1197
BfmI CTRYAG 1 cut(s) 290
BfoI RGCGCY 1 cut(s) 544
BisI GCNGC 8 cut(s) 35, 290, 327, 615, 645, 851, 1034, 1091
BlsI GCNGC 8 cut(s) 36, 291, 328, 616, 646, 852, 1035, 1092
BmcAI AGTACT 1 cut(s) 533
Bme1390I CCNGG 6 cut(s) 130, 244, 469, 721, 873, 1014
Bme18I GGWCC 1 cut(s) 702
BmeT110I CYCGRG 1 cut(s) 507
BmgT120I GGNCC 3 cut(s) 447, 702, 1088
BmiI GGNNCC 5 cut(s) 448, 456, 473, 703, 704
BmrFI CCNGG 6 cut(s) 130, 244, 469, 721, 873, 1014
BmrI ACTGGG 1 cut(s) 445
BmsI GCATC 1 cut(s) 631
BmtI GCTAGC 1 cut(s) 915
BmuI ACTGGG 1 cut(s) 445
BpmI CTGGAG 1 cut(s) 731
Bpu10I CCTNAGC 1 cut(s) 339
BpuEI CTTGAG 2 cut(s) 110, 305
BpuMI CCSGG 3 cut(s) 130, 721, 873
Bsa29I ATCGAT 1 cut(s) 738
BsaAI YACGTR 2 cut(s) 547, 953
BsaJI CCNNGG 4 cut(s) 242, 450, 553, 654
BsaWI WCCGGW 1 cut(s) 521
Bsc4I CCNNNNNNNGG 6 cut(s) 128, 248, 249, 474, 811, 896
Bse118I RCCGGY 2 cut(s) 521, 995
Bse1I ACTGG 3 cut(s) 440, 1155, 1258
Bse3DI GCAATG 3 cut(s) 26, 913, 1006
BseBI CCWGG 3 cut(s) 244, 469, 1014
BseCI ATCGAT 1 cut(s) 738
BseDI CCNNGG 4 cut(s) 242, 450, 553, 654
BseGI GGATG 3 cut(s) 252, 703, 1061
BseLI CCNNNNNNNGG 6 cut(s) 128, 248, 249, 474, 811, 896
BseMI GCAATG 3 cut(s) 26, 913, 1006
BseMII CTCAG 1 cut(s) 330
BseNI ACTGG 3 cut(s) 440, 1155, 1258
BseRI GAGGAG 4 cut(s) 636, 639, 1135, 1238
BseSI GKGCMC 1 cut(s) 552
BseXI GCAGC 4 cut(s) 46, 276, 313, 631
Bsh1236I CGCG 1 cut(s) 555
BshFI GGCC 6 cut(s) 449, 853, 871, 1017, 1048, 1090
BshNI GGYRCC 1 cut(s) 471
BshTI ACCGGT 1 cut(s) 521
BshVI ATCGAT 1 cut(s) 738
BsiHKAI GWGCWC 3 cut(s) 96, 506, 552
BsiHKCI CYCGRG 1 cut(s) 507
BsiSI CCGG 7 cut(s) 129, 475, 522, 618, 720, 872, 996
BslFI GGGAC 4 cut(s) 712, 715, 888, 1075
BslI CCNNNNNNNGG 6 cut(s) 128, 248, 249, 474, 811, 896
BsmAI GTCTC 1 cut(s) 504
BsmBI CGTCTC 1 cut(s) 504
BsmFI GGGAC 4 cut(s) 712, 715, 888, 1075
BsmI GAATGC 1 cut(s) 373
BsnI GGCC 6 cut(s) 449, 853, 871, 1017, 1048, 1090
BsoBI CYCGRG 1 cut(s) 507
Bsp1286I GDGCHC 3 cut(s) 96, 506, 552
Bsp143I GATC 2 cut(s) 454, 739
Bsp19I CCATGG 1 cut(s) 450
BspANI GGCC 6 cut(s) 449, 853, 871, 1017, 1048, 1090
BspCNI CTCAG 1 cut(s) 331
BspDI ATCGAT 1 cut(s) 738
BspFNI CGCG 1 cut(s) 555
BspLI GGNNCC 5 cut(s) 448, 456, 473, 703, 704
BspMAI CTGCAG 1 cut(s) 294
BspOI GCTAGC 1 cut(s) 915
BspPI GGATC 2 cut(s) 449, 462
BspT107I GGYRCC 1 cut(s) 471
BsrDI GCAATG 3 cut(s) 26, 913, 1006
BsrFI RCCGGY 2 cut(s) 521, 995
BsrI ACTGG 3 cut(s) 440, 1155, 1258
BssAI RCCGGY 2 cut(s) 521, 995
BssECI CCNNGG 4 cut(s) 242, 450, 553, 654
BssMI GATC 2 cut(s) 454, 739
BssSI CACGAG 2 cut(s) 1176, 1279
BssT1I CCWWGG 2 cut(s) 450, 654
Bst2BI CACGAG 2 cut(s) 1176, 1279
Bst2UI CCWGG 3 cut(s) 244, 469, 1014
Bst4CI ACNGT 3 cut(s) 408, 566, 670
Bst6I CTCTTC 2 cut(s) 405, 436
BstBAI YACGTR 2 cut(s) 547, 953
BstC8I GCNNGC 5 cut(s) 294, 318, 539, 913, 1095
BstDEI CTNAG 1 cut(s) 339
BstDSI CCRYGG 2 cut(s) 450, 553
BstF5I GGATG 3 cut(s) 252, 703, 1061
BstFNI CGCG 1 cut(s) 555
BstH2I RGCGCY 1 cut(s) 544
BstHHI GCGC 1 cut(s) 543
BstKTI GATC 2 cut(s) 457, 742
BstMAI GTCTC 1 cut(s) 504
BstMBI GATC 2 cut(s) 454, 739
BstMWI GCNNNNNNNGC 8 cut(s) 227, 261, 289, 326, 349, 547, 877, 912
BstNI CCWGG 3 cut(s) 244, 469, 1014
BstNSI RCATGY 2 cut(s) 316, 581
BstSCI CCNGG 6 cut(s) 128, 242, 467, 719, 871, 1012
BstSFI CTRYAG 1 cut(s) 290
BstSLI GKGCMC 1 cut(s) 552
BstUI CGCG 1 cut(s) 555
BstV1I GCAGC 4 cut(s) 46, 276, 313, 631
BstX2I RGATCY 1 cut(s) 454
BstXI CCANNNNNNTGG 1 cut(s) 1056
BstYI RGATCY 1 cut(s) 454
Bsu15I ATCGAT 1 cut(s) 738
BsuRI GGCC 6 cut(s) 449, 853, 871, 1017, 1048, 1090
BsuTUI ATCGAT 1 cut(s) 738
BtgI CCRYGG 2 cut(s) 450, 553
BtsCI GGATG 3 cut(s) 252, 703, 1061
BtsIMutI CAGTG 3 cut(s) 278, 1162, 1265
Cac8I GCNNGC 5 cut(s) 294, 318, 539, 913, 1095
CfoI GCGC 1 cut(s) 543
Cfr10I RCCGGY 2 cut(s) 521, 995
Cfr13I GGNCC 3 cut(s) 447, 702, 1088
Cfr42I CCGCGG 1 cut(s) 556
ClaI ATCGAT 1 cut(s) 738
CsiI ACCWGGT 1 cut(s) 467
Csp6I GTAC 5 cut(s) 152, 310, 409, 433, 532
CspAI ACCGGT 1 cut(s) 521
CviAII CATG 6 cut(s) 38, 265, 313, 451, 578, 779
CviQI GTAC 5 cut(s) 152, 310, 409, 433, 532
DdeI CTNAG 1 cut(s) 339
DpnI GATC 2 cut(s) 456, 741
DpnII GATC 2 cut(s) 454, 739
EaeI YGGCCR 2 cut(s) 869, 1046
Eam1104I CTCTTC 2 cut(s) 405, 436
EarI CTCTTC 2 cut(s) 405, 436
Eco130I CCWWGG 2 cut(s) 450, 654
Eco47I GGWCC 1 cut(s) 702
Eco57I CTGAAG 3 cut(s) 83, 244, 332
Eco72I CACGTG 1 cut(s) 547
Eco88I CYCGRG 1 cut(s) 507
EcoO109I RGGNCCY 1 cut(s) 702
EcoRII CCWGG 3 cut(s) 242, 467, 1012
EcoT14I CCWWGG 2 cut(s) 450, 654
ErhI CCWWGG 2 cut(s) 450, 654
Esp3I CGTCTC 1 cut(s) 504
FaeI CATG 6 cut(s) 41, 268, 316, 454, 581, 782
FalI AAGNNNNNCTT 2 cut(s) 779, 811
FaqI GGGAC 4 cut(s) 712, 715, 888, 1075
FatI CATG 6 cut(s) 37, 264, 312, 450, 577, 778
FauNDI CATATG 1 cut(s) 1071
FblI GTMKAC 1 cut(s) 992
Fnu4HI GCNGC 8 cut(s) 35, 290, 327, 615, 645, 851, 1034, 1091
FokI GGATG 3 cut(s) 259, 710, 1068
Fsp4HI GCNGC 8 cut(s) 35, 290, 327, 615, 645, 851, 1034, 1091
FspBI CTAG 2 cut(s) 912, 1197
GlaI GCGC 1 cut(s) 542
GluI GCNGC 8 cut(s) 35, 290, 327, 615, 645, 851, 1034, 1091
GsuI CTGGAG 1 cut(s) 731
HaeII RGCGCY 1 cut(s) 544
HaeIII GGCC 6 cut(s) 449, 853, 871, 1017, 1048, 1090
HapII CCGG 7 cut(s) 129, 475, 522, 618, 720, 872, 996
HhaI GCGC 1 cut(s) 543
Hin1II CATG 6 cut(s) 41, 268, 316, 454, 581, 782
Hin6I GCGC 1 cut(s) 541
HinP1I GCGC 1 cut(s) 541
HinfI GANTC 5 cut(s) 41, 200, 268, 634, 770
HpaII CCGG 7 cut(s) 129, 475, 522, 618, 720, 872, 996
HphI GGTGA 3 cut(s) 580, 1140, 1243
Hpy166II GTNNAC 3 cut(s) 550, 993, 1028
Hpy188I TCNGA 7 cut(s) 46, 102, 199, 528, 697, 835, 973
Hpy188III TCNNGA 8 cut(s) 338, 358, 458, 507, 509, 570, 638, 819
Hpy8I GTNNAC 3 cut(s) 550, 993, 1028
HpyAV CCTTC 3 cut(s) 107, 377, 741
HpyCH4III ACNGT 3 cut(s) 408, 566, 670
HpyCH4IV ACGT 3 cut(s) 513, 546, 952
HpyCH4V TGCA 6 cut(s) 292, 373, 424, 550, 1097, 1212
HpyF10VI GCNNNNNNNGC 8 cut(s) 227, 261, 289, 326, 349, 547, 877, 912
HpyF3I CTNAG 1 cut(s) 339
HpySE526I ACGT 3 cut(s) 513, 546, 952
Hsp92II CATG 6 cut(s) 41, 268, 316, 454, 581, 782
HspAI GCGC 1 cut(s) 541
KflI GGGWCCC 1 cut(s) 702
KspI CCGCGG 1 cut(s) 556
Kzo9I GATC 2 cut(s) 454, 739
LmnI GCTCC 3 cut(s) 252, 750, 885
Lsp1109I GCAGC 4 cut(s) 46, 276, 313, 631
LweI GCATC 1 cut(s) 631
MabI ACCWGGT 1 cut(s) 467
MaeI CTAG 2 cut(s) 912, 1197
MaeII ACGT 3 cut(s) 513, 546, 952
MaeIII GTNAC 3 cut(s) 517, 586, 664
MalI GATC 2 cut(s) 456, 741
MboI GATC 2 cut(s) 454, 739
MboII GAAGA 9 cut(s) 57, 216, 338, 376, 379, 392, 453, 1154, 1257
MfeI CAATTG 1 cut(s) 1037
MflI RGATCY 1 cut(s) 454
MhlI GDGCHC 3 cut(s) 96, 506, 552
MlsI TGGCCA 1 cut(s) 1048
MluCI AATT 3 cut(s) 380, 1037, 1042
MluNI TGGCCA 1 cut(s) 1048
MlyI GAGTC 4 cut(s) 50, 277, 628, 779
Mox20I TGGCCA 1 cut(s) 1048
MroXI GAANNNNTTC 1 cut(s) 565
MscI TGGCCA 1 cut(s) 1048
Msp20I TGGCCA 1 cut(s) 1048
MspA1I CMGCKG 1 cut(s) 555
MspI CCGG 7 cut(s) 129, 475, 522, 618, 720, 872, 996
MspR9I CCNGG 6 cut(s) 130, 244, 469, 721, 873, 1014
MunI CAATTG 1 cut(s) 1037
Mva1269I GAATGC 1 cut(s) 373
MvaI CCWGG 3 cut(s) 244, 469, 1014
MvnI CGCG 1 cut(s) 555
MwoI GCNNNNNNNGC 8 cut(s) 227, 261, 289, 326, 349, 547, 877, 912
NciI CCSGG 3 cut(s) 130, 721, 873
NcoI CCATGG 1 cut(s) 450
NdeI CATATG 1 cut(s) 1071
NdeII GATC 2 cut(s) 454, 739
NheI GCTAGC 1 cut(s) 911
NlaIII CATG 6 cut(s) 41, 268, 316, 454, 581, 782
NlaIV GGNNCC 5 cut(s) 448, 456, 473, 703, 704
NmuCI GTSAC 2 cut(s) 517, 586
NspI RCATGY 2 cut(s) 316, 581
PaeR7I CTCGAG 1 cut(s) 507
PcsI WCGNNNNNNNCGW 2 cut(s) 1174, 1277
PctI GAATGC 1 cut(s) 373
PdmI GAANNNNTTC 1 cut(s) 565
PfeI GAWTC 1 cut(s) 200
PinAI ACCGGT 1 cut(s) 521
PkrI GCNGC 8 cut(s) 36, 291, 328, 616, 646, 852, 1035, 1092
PleI GAGTC 4 cut(s) 49, 276, 628, 778
PmaCI CACGTG 1 cut(s) 547
PmlI CACGTG 1 cut(s) 547
PpsI GAGTC 4 cut(s) 49, 276, 628, 778
Ppu21I YACGTR 2 cut(s) 547, 953
PpuMI RGGWCCY 1 cut(s) 702
Psp5II RGGWCCY 1 cut(s) 702
Psp6I CCWGG 3 cut(s) 242, 467, 1012
PspCI CACGTG 1 cut(s) 547
PspGI CCWGG 3 cut(s) 242, 467, 1012
PspN4I GGNNCC 5 cut(s) 448, 456, 473, 703, 704
PspPI GGNCC 3 cut(s) 447, 702, 1088
PspPPI RGGWCCY 1 cut(s) 702
PstI CTGCAG 1 cut(s) 294
PsuI RGATCY 1 cut(s) 454
RsaI GTAC 5 cut(s) 153, 311, 410, 434, 533
RsaNI GTAC 5 cut(s) 152, 310, 409, 433, 532
SacII CCGCGG 1 cut(s) 556
SatI GCNGC 8 cut(s) 35, 290, 327, 615, 645, 851, 1034, 1091
Sau3AI GATC 2 cut(s) 454, 739
Sau96I GGNCC 3 cut(s) 447, 702, 1088
ScaI AGTACT 1 cut(s) 533
SchI GAGTC 4 cut(s) 50, 277, 628, 779
ScrFI CCNGG 6 cut(s) 130, 244, 469, 721, 873, 1014
SduI GDGCHC 3 cut(s) 96, 506, 552
SexAI ACCWGGT 1 cut(s) 467
SfaNI GCATC 1 cut(s) 631
SfcI CTRYAG 1 cut(s) 290
Sfr274I CTCGAG 1 cut(s) 507
Sfr303I CCGCGG 1 cut(s) 556
SgrBI CCGCGG 1 cut(s) 556
SinI GGWCC 1 cut(s) 702
SlaI CTCGAG 1 cut(s) 507
SmlI CTYRAG 4 cut(s) 14, 89, 284, 507
SmoI CTYRAG 4 cut(s) 14, 89, 284, 507
Sse9I AATT 3 cut(s) 380, 1037, 1042
SspMI CTAG 2 cut(s) 912, 1197
StyD4I CCNGG 6 cut(s) 128, 242, 467, 719, 871, 1012
StyI CCWWGG 2 cut(s) 450, 654
TaaI ACNGT 3 cut(s) 408, 566, 670
TaiI ACGT 3 cut(s) 516, 549, 955
TaqI TCGA 3 cut(s) 508, 738, 861
TasI AATT 3 cut(s) 380, 1037, 1042
TatI WGTACW 1 cut(s) 531
TauI GCSGC 4 cut(s) 617, 853, 1036, 1093
TfiI GAWTC 1 cut(s) 200
TscAI CASTG 3 cut(s) 278, 1162, 1265
TseFI GTSAC 2 cut(s) 517, 586
TseI GCWGC 4 cut(s) 34, 289, 326, 644
Tsp45I GTSAC 2 cut(s) 517, 586
TspDTI ATGAA 5 cut(s) 935, 1154, 1192, 1206, 1257
TspRI CASTG 3 cut(s) 278, 1162, 1265
VneI GTGCAC 1 cut(s) 548
VpaK11BI GGWCC 1 cut(s) 702
XceI RCATGY 2 cut(s) 316, 581
XhoI CTCGAG 1 cut(s) 507
XmiI GTMKAC 1 cut(s) 992
XmnI GAANNNNTTC 1 cut(s) 565
XspI CTAG 2 cut(s) 912, 1197
ZrmI AGTACT 1 cut(s) 533
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.