FvH4_6g18130

Growth-regulating factor

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
11941176 .. 11943633
2458 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g18130.t1

Sequence Viewer

Length: 1104 bp
ATGGACTTTCATCTCAAGCAATGGAGAAACCAGCAGCAGCATGAGTCAGAGGAACAACAGCCCTATCCTTCTGCTGCAAAGATACCAAAACTTGAGACCCAAACACACCCTGAACCAGTTTCTGGGTATGCTCTCCCTTTGTTTGTACCTGAACCAAACACCAAAGTCATCAGCACCCTGTCAGCATTTTCTGAATCTACTACCACCACCACCGCCCCAGCTTCTTCTGCCACCAGATTTCCCAGAATGGGGAGCTTCTTCAGCATGAGTCAGTGGCAAGAGCTTGAGCTACAGGCTTTGATATTCAGGTACATGCTGGCTGGTGCTGCTGTTCCTCCTGAACTTCTTCAGCCAATCAAGAGAAGCCTTCTGCATTCTCAATTCTTCTTCCAACACCATCTTCAACATTACCCTGCTTTGTTGCAATCCGGGTATTGGGGAAGAGGGTCCATGGATCCGGAGCCGACCAGGTGCCGGAGGACAGATGGCAAGAAATGGCGGTGCTCTAAAGACGTGGTGGCCGGTCAGAAGTACTGCGAGCGCCACGTGCACCGTGGACGAAACCGTTCAAGAAAGCCTGTGGAAGTCACCACCGCCACCACAAACGCCGCCGGAGGCAGCGGAGCTGCTACCGACAACTCGGTCGTGACTGTTGCCTCGTCGTTGGGAAAAGGGTCGAATGGTACCCACTTTGCTCTTTCTGGGTCATCACCATCCATTGATCTGCTCCAGCTCAGTCAGAATCAAAGGGAAGTTTCGAGAGGTGTTCAATCTGACAGTCATGTCTTGCGGCCGTTTTTTGATGACTGGCCGGGACAGCTCCAAGAACCGGACAATGGGAGAAGCAATGCTACGTCAAATAACAATGCCACATCCCTGTCCATTTCGCTGAAGTTGTCTACCGGCAATGGAGTAGAGCCAGGCCAAGAGAGCGAGCAGCCACAGTTGAATTGGCCCATGGGATGGGGATCAAACCATATGGTTTCGATGGGAGGGCCTCTTGCAGAGGCGCTGCGGTCATCCAACTCCAACTCCTCACCCACCAGTGTTCTTCATCAGTTGCCTCGCGGCTCTGTCTCTGAAACCAGCTTCATCAGCACCTGA

Protein Analysis

368

Amino Acids

40.26

Weight (kDa)

8.75

Isoelectric Point (pI)

54.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
QLQ PF08880 87 - 119 2.2e-13 QLQ
WRC PF08879 153 - 195 6.7e-21 WRC
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012002)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 641, 782
Acc65I GGTACC 1 cut(s) 683
AccB1I GGYRCC 2 cut(s) 471, 683
AccB7I CCANNNNNTGG 2 cut(s) 122, 963
AccI GTMKAC 1 cut(s) 899
AccII CGCG 1 cut(s) 1068
AccIII TCCGGA 1 cut(s) 457
AciI CCGC 8 cut(s) 213, 499, 594, 609, 621, 790, 1015, 1068
AclWI GGATC 3 cut(s) 449, 462, 976
AcoI YGGCCR 3 cut(s) 519, 791, 809
AcuI CTGAAG 3 cut(s) 244, 332, 911
AcvI CACGTG 1 cut(s) 547
AfaI GTAC 4 cut(s) 147, 311, 533, 685
AfiI CCNNNNNNNGG 8 cut(s) 122, 248, 249, 435, 474, 829, 836, 963
AgsI TTSAA 4 cut(s) 404, 570, 770, 949
AjiI CACGTC 1 cut(s) 514
AjnI CCWGG 2 cut(s) 467, 919
AjuI GAANNNNNNNTTGG 2 cut(s) 384, 416
AluBI AGCT 8 cut(s) 221, 255, 283, 289, 626, 733, 820, 1089
AluI AGCT 8 cut(s) 221, 255, 283, 289, 626, 733, 820, 1089
Alw21I GWGCWC 2 cut(s) 506, 552
Alw26I GTCTC 2 cut(s) 89, 1081
Alw44I GTGCAC 1 cut(s) 548
AlwI GGATC 3 cut(s) 449, 462, 976
AlwNI CAGNNNCTG 2 cut(s) 122, 1101
Aor13HI TCCGGA 1 cut(s) 457
AoxI GGCC 6 cut(s) 519, 791, 809, 922, 953, 995
ApaLI GTGCAC 1 cut(s) 548
ApeKI GCWGC 8 cut(s) 34, 37, 74, 326, 618, 626, 937, 1012
Asp700I GAANNNNTTC 2 cut(s) 345, 565
Asp718I GGTACC 1 cut(s) 683
AspLEI GCGC 2 cut(s) 543, 1012
AspS9I GGNCC 3 cut(s) 447, 954, 995
AsuC2I CCSGG 2 cut(s) 430, 813
AsuHPI GGTGA 3 cut(s) 580, 702, 1029
AvaII GGWCC 1 cut(s) 447
BaeGI GKGCMC 1 cut(s) 552
BamHI GGATCC 1 cut(s) 454
BanI GGYRCC 2 cut(s) 471, 683
BarI GAAGNNNNNNTAC 2 cut(s) 835, 867
BbrPI CACGTG 1 cut(s) 547
Bbv12I GWGCWC 2 cut(s) 506, 552
BbvI GCAGC 8 cut(s) 46, 49, 61, 313, 613, 630, 949, 999
BccI CCATC 5 cut(s) 405, 479, 721, 957, 982
BceAI ACGGC 1 cut(s) 778
BciT130I CCWGG 2 cut(s) 469, 921
BcnI CCSGG 2 cut(s) 430, 813
BcoDI GTCTC 2 cut(s) 89, 1081
BfmI CTRYAG 1 cut(s) 290
BfoI RGCGCY 2 cut(s) 544, 1013
BmcAI AGTACT 1 cut(s) 533
Bme1390I CCNGG 4 cut(s) 430, 469, 813, 921
Bme18I GGWCC 1 cut(s) 447
BmgBI CACGTC 1 cut(s) 514
BmgT120I GGNCC 3 cut(s) 447, 954, 995
BmiI GGNNCC 5 cut(s) 448, 456, 462, 473, 685
BmrFI CCNGG 4 cut(s) 430, 469, 813, 921
BpmI CTGGAG 1 cut(s) 713
BpuEI CTTGAG 2 cut(s) 113, 305
BpuMI CCSGG 2 cut(s) 430, 813
BsaAI YACGTR 1 cut(s) 547
BsaBI GATNNNNATC 1 cut(s) 967
BsaI GGTCTC 1 cut(s) 89
BsaJI CCNNGG 3 cut(s) 450, 553, 957
BsaWI WCCGGW 2 cut(s) 457, 829
BsaXI ACNNNNNCTCC 2 cut(s) 1016, 1046
Bsc4I CCNNNNNNNGG 8 cut(s) 122, 248, 249, 435, 474, 829, 836, 963
Bse118I RCCGGY 2 cut(s) 521, 902
Bse1I ACTGG 3 cut(s) 116, 812, 1044
Bse3DI GCAATG 3 cut(s) 26, 853, 913
Bse8I GATNNNNATC 1 cut(s) 967
BseAI TCCGGA 1 cut(s) 457
BseBI CCWGG 2 cut(s) 469, 921
BseDI CCNNGG 3 cut(s) 450, 553, 957
BseGI GGATG 4 cut(s) 713, 872, 968, 1019
BseJI GATNNNNATC 1 cut(s) 967
BseLI CCNNNNNNNGG 8 cut(s) 122, 248, 249, 435, 474, 829, 836, 963
BseMI GCAATG 3 cut(s) 26, 853, 913
BseMII CTCAG 1 cut(s) 748
BseNI ACTGG 3 cut(s) 116, 812, 1044
BseRI GAGGAG 1 cut(s) 1024
BseSI GKGCMC 1 cut(s) 552
BseX3I CGGCCG 1 cut(s) 791
BseXI GCAGC 8 cut(s) 46, 49, 61, 313, 613, 630, 949, 999
BseYI CCCAGC 1 cut(s) 217
Bsh1236I CGCG 1 cut(s) 1068
Bsh1285I CGRYCG 2 cut(s) 645, 794
BshFI GGCC 6 cut(s) 521, 793, 811, 924, 955, 997
BshNI GGYRCC 2 cut(s) 471, 683
BsiEI CGRYCG 2 cut(s) 645, 794
BsiHKAI GWGCWC 2 cut(s) 506, 552
BsiSI CCGG 8 cut(s) 429, 458, 475, 522, 612, 812, 830, 903
BslFI GGGAC 1 cut(s) 828
BslI CCNNNNNNNGG 8 cut(s) 122, 248, 249, 435, 474, 829, 836, 963
BsmAI GTCTC 2 cut(s) 89, 1081
BsmFI GGGAC 1 cut(s) 828
BsmI GAATGC 1 cut(s) 373
BsnI GGCC 6 cut(s) 521, 793, 811, 924, 955, 997
Bso31I GGTCTC 1 cut(s) 89
Bsp1286I GDGCHC 2 cut(s) 506, 552
Bsp13I TCCGGA 1 cut(s) 457
Bsp143I GATC 3 cut(s) 454, 721, 968
Bsp19I CCATGG 2 cut(s) 450, 957
BspACI CCGC 8 cut(s) 213, 499, 594, 609, 621, 790, 1015, 1068
BspANI GGCC 6 cut(s) 521, 793, 811, 924, 955, 997
BspCNI CTCAG 1 cut(s) 747
BspEI TCCGGA 1 cut(s) 457
BspFNI CGCG 1 cut(s) 1068
BspLI GGNNCC 5 cut(s) 448, 456, 462, 473, 685
BspPI GGATC 3 cut(s) 449, 462, 976
BspT107I GGYRCC 2 cut(s) 471, 683
BspTNI GGTCTC 1 cut(s) 89
BsrDI GCAATG 3 cut(s) 26, 853, 913
BsrFI RCCGGY 2 cut(s) 521, 902
BsrI ACTGG 3 cut(s) 116, 812, 1044
BssAI RCCGGY 2 cut(s) 521, 902
BssECI CCNNGG 3 cut(s) 450, 553, 957
BssMI GATC 3 cut(s) 454, 721, 968
BssT1I CCWWGG 2 cut(s) 450, 957
Bst2UI CCWGG 2 cut(s) 469, 921
Bst4CI ACNGT 5 cut(s) 554, 566, 652, 779, 945
Bst6I CTCTTC 1 cut(s) 436
BstBAI YACGTR 1 cut(s) 547
BstC8I GCNNGC 3 cut(s) 318, 539, 935
BstDEI CTNAG 1 cut(s) 734
BstDSI CCRYGG 3 cut(s) 450, 553, 957
BstF5I GGATG 4 cut(s) 713, 872, 968, 1019
BstFNI CGCG 1 cut(s) 1068
BstH2I RGCGCY 2 cut(s) 544, 1013
BstHHI GCGC 2 cut(s) 543, 1012
BstKTI GATC 3 cut(s) 457, 724, 971
BstMAI GTCTC 2 cut(s) 89, 1081
BstMBI GATC 3 cut(s) 454, 721, 968
BstMCI CGRYCG 2 cut(s) 645, 794
BstMWI GCNNNNNNNGC 7 cut(s) 227, 261, 326, 547, 817, 930, 1095
BstNI CCWGG 2 cut(s) 469, 921
BstNSI RCATGY 1 cut(s) 316
BstSCI CCNGG 4 cut(s) 428, 467, 811, 919
BstSFI CTRYAG 1 cut(s) 290
BstSLI GKGCMC 1 cut(s) 552
BstUI CGCG 1 cut(s) 1068
BstV1I GCAGC 8 cut(s) 46, 49, 61, 313, 613, 630, 949, 999
BstX2I RGATCY 1 cut(s) 454
BstYI RGATCY 1 cut(s) 454
BstZI CGGCCG 1 cut(s) 791
BsuRI GGCC 6 cut(s) 521, 793, 811, 924, 955, 997
BtgI CCRYGG 3 cut(s) 450, 553, 957
BtrI CACGTC 1 cut(s) 514
BtsCI GGATG 4 cut(s) 713, 872, 968, 1019
BtsIMutI CAGTG 2 cut(s) 278, 1051
Cac8I GCNNGC 3 cut(s) 318, 539, 935
CaiI CAGNNNCTG 2 cut(s) 122, 1101
CfoI GCGC 2 cut(s) 543, 1012
Cfr10I RCCGGY 2 cut(s) 521, 902
Cfr13I GGNCC 3 cut(s) 447, 954, 995
CsiI ACCWGGT 1 cut(s) 467
Csp6I GTAC 4 cut(s) 146, 310, 532, 684
CviAII CATG 6 cut(s) 41, 265, 313, 451, 782, 958
CviQI GTAC 4 cut(s) 146, 310, 532, 684
DdeI CTNAG 1 cut(s) 734
DpnI GATC 3 cut(s) 456, 723, 970
DpnII GATC 3 cut(s) 454, 721, 968
DrdI GACNNNNNNGTC 2 cut(s) 641, 782
DseDI GACNNNNNNGTC 2 cut(s) 641, 782
EaeI YGGCCR 3 cut(s) 519, 791, 809
EagI CGGCCG 1 cut(s) 791
Eam1104I CTCTTC 1 cut(s) 436
EarI CTCTTC 1 cut(s) 436
EclXI CGGCCG 1 cut(s) 791
Eco130I CCWWGG 2 cut(s) 450, 957
Eco31I GGTCTC 1 cut(s) 89
Eco47I GGWCC 1 cut(s) 447
Eco52I CGGCCG 1 cut(s) 791
Eco57I CTGAAG 3 cut(s) 244, 332, 911
Eco72I CACGTG 1 cut(s) 547
EcoO109I RGGNCCY 1 cut(s) 995
EcoRII CCWGG 2 cut(s) 467, 919
EcoT14I CCWWGG 2 cut(s) 450, 957
ErhI CCWWGG 2 cut(s) 450, 957
FaeI CATG 6 cut(s) 44, 268, 316, 454, 785, 961
FaiI YATR 9 cut(s) 42, 129, 266, 314, 452, 783, 959, 978, 980
FaqI GGGAC 1 cut(s) 828
FatI CATG 6 cut(s) 40, 264, 312, 450, 781, 957
FauNDI CATATG 1 cut(s) 978
FblI GTMKAC 1 cut(s) 899
FokI GGATG 4 cut(s) 700, 859, 975, 1006
GlaI GCGC 2 cut(s) 542, 1011
GsaI CCCAGC 1 cut(s) 221
GsuI CTGGAG 1 cut(s) 713
HaeII RGCGCY 2 cut(s) 544, 1013
HaeIII GGCC 6 cut(s) 521, 793, 811, 924, 955, 997
HapII CCGG 8 cut(s) 429, 458, 475, 522, 612, 812, 830, 903
HhaI GCGC 2 cut(s) 543, 1012
Hin1II CATG 6 cut(s) 44, 268, 316, 454, 785, 961
Hin6I GCGC 2 cut(s) 541, 1010
HinP1I GCGC 2 cut(s) 541, 1010
HinfI GANTC 4 cut(s) 44, 194, 268, 742
HpaII CCGG 8 cut(s) 429, 458, 475, 522, 612, 812, 830, 903
HphI GGTGA 3 cut(s) 580, 702, 1029
Hpy166II GTNNAC 3 cut(s) 550, 557, 900
Hpy188I TCNGA 6 cut(s) 49, 193, 528, 741, 775, 1081
Hpy188III TCNNGA 6 cut(s) 338, 358, 458, 570, 646, 759
Hpy8I GTNNAC 3 cut(s) 550, 557, 900
Hpy99I CGWCG 1 cut(s) 664
HpyAV CCTTC 2 cut(s) 78, 377
HpyCH4III ACNGT 5 cut(s) 554, 566, 652, 779, 945
HpyCH4IV ACGT 3 cut(s) 513, 546, 854
HpyCH4V TGCA 5 cut(s) 77, 373, 424, 550, 1004
HpyF10VI GCNNNNNNNGC 7 cut(s) 227, 261, 326, 547, 817, 930, 1095
HpyF3I CTNAG 1 cut(s) 734
HpySE526I ACGT 3 cut(s) 513, 546, 854
Hsp92II CATG 6 cut(s) 44, 268, 316, 454, 785, 961
HspAI GCGC 2 cut(s) 541, 1010
Kpn2I TCCGGA 1 cut(s) 457
KpnI GGTACC 1 cut(s) 687
Kzo9I GATC 3 cut(s) 454, 721, 968
LmnI GCTCC 5 cut(s) 252, 460, 623, 732, 825
Lsp1109I GCAGC 8 cut(s) 46, 49, 61, 313, 613, 630, 949, 999
MabI ACCWGGT 1 cut(s) 467
MaeII ACGT 3 cut(s) 513, 546, 854
MaeIII GTNAC 2 cut(s) 586, 646
MalI GATC 3 cut(s) 456, 723, 970
MboI GATC 3 cut(s) 454, 721, 968
MboII GAAGA 8 cut(s) 216, 250, 338, 376, 379, 392, 453, 1043
MflI RGATCY 1 cut(s) 454
MhlI GDGCHC 2 cut(s) 506, 552
MluCI AATT 2 cut(s) 380, 949
MlyI GAGTC 2 cut(s) 53, 277
MmeI TCCRAC 3 cut(s) 415, 1047, 1053
MroI TCCGGA 1 cut(s) 457
MroXI GAANNNNTTC 2 cut(s) 345, 565
MspA1I CMGCKG 1 cut(s) 621
MspI CCGG 8 cut(s) 429, 458, 475, 522, 612, 812, 830, 903
MspR9I CCNGG 4 cut(s) 430, 469, 813, 921
Mva1269I GAATGC 1 cut(s) 373
MvaI CCWGG 2 cut(s) 469, 921
MvnI CGCG 1 cut(s) 1068
MwoI GCNNNNNNNGC 7 cut(s) 227, 261, 326, 547, 817, 930, 1095
NciI CCSGG 2 cut(s) 430, 813
NcoI CCATGG 2 cut(s) 450, 957
NdeI CATATG 1 cut(s) 978
NdeII GATC 3 cut(s) 454, 721, 968
NlaIII CATG 6 cut(s) 44, 268, 316, 454, 785, 961
NlaIV GGNNCC 5 cut(s) 448, 456, 462, 473, 685
NmuCI GTSAC 2 cut(s) 586, 646
NspI RCATGY 1 cut(s) 316
PctI GAATGC 1 cut(s) 373
PdmI GAANNNNTTC 2 cut(s) 345, 565
PfeI GAWTC 2 cut(s) 194, 742
PflMI CCANNNNNTGG 2 cut(s) 122, 963
PleI GAGTC 2 cut(s) 52, 276
PmaCI CACGTG 1 cut(s) 547
PmlI CACGTG 1 cut(s) 547
PpsI GAGTC 2 cut(s) 52, 276
Ppu21I YACGTR 1 cut(s) 547
Psp6I CCWGG 2 cut(s) 467, 919
PspCI CACGTG 1 cut(s) 547
PspFI CCCAGC 1 cut(s) 217
PspGI CCWGG 2 cut(s) 467, 919
PspN4I GGNNCC 5 cut(s) 448, 456, 462, 473, 685
PspPI GGNCC 3 cut(s) 447, 954, 995
PstNI CAGNNNCTG 2 cut(s) 122, 1101
PsuI RGATCY 1 cut(s) 454
RsaI GTAC 4 cut(s) 147, 311, 533, 685
RsaNI GTAC 4 cut(s) 146, 310, 532, 684
Sau3AI GATC 3 cut(s) 454, 721, 968
Sau96I GGNCC 3 cut(s) 447, 954, 995
ScaI AGTACT 1 cut(s) 533
SchI GAGTC 2 cut(s) 53, 277
ScrFI CCNGG 4 cut(s) 430, 469, 813, 921
SduI GDGCHC 2 cut(s) 506, 552
SexAI ACCWGGT 1 cut(s) 467
SfcI CTRYAG 1 cut(s) 290
SinI GGWCC 1 cut(s) 447
SmlI CTYRAG 3 cut(s) 14, 92, 284
SmoI CTYRAG 3 cut(s) 14, 92, 284
Sse9I AATT 2 cut(s) 380, 949
SsiI CCGC 8 cut(s) 213, 499, 594, 609, 621, 790, 1015, 1068
StyD4I CCNGG 4 cut(s) 428, 467, 811, 919
StyI CCWWGG 2 cut(s) 450, 957
TaaI ACNGT 5 cut(s) 554, 566, 652, 779, 945
TaiI ACGT 3 cut(s) 516, 549, 857
TaqI TCGA 3 cut(s) 677, 758, 986
TaqII GACCGA 1 cut(s) 631
TasI AATT 2 cut(s) 380, 949
TatI WGTACW 1 cut(s) 531
TauI GCSGC 3 cut(s) 611, 793, 1071
TfiI GAWTC 2 cut(s) 194, 742
TscAI CASTG 2 cut(s) 278, 1051
TseFI GTSAC 2 cut(s) 586, 646
TseI GCWGC 8 cut(s) 34, 37, 74, 326, 618, 626, 937, 1012
Tsp45I GTSAC 2 cut(s) 586, 646
TspDTI ATGAA 2 cut(s) 1043, 1081
TspRI CASTG 2 cut(s) 278, 1051
Van91I CCANNNNNTGG 2 cut(s) 122, 963
VneI GTGCAC 1 cut(s) 548
VpaK11BI GGWCC 1 cut(s) 447
XceI RCATGY 1 cut(s) 316
XcmI CCANNNNNNNNNTGG 2 cut(s) 551, 948
XmiI GTMKAC 1 cut(s) 899
XmnI GAANNNNTTC 2 cut(s) 345, 565
ZrmI AGTACT 1 cut(s) 533
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.