Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006135

Physical Location & Seq

Genomic Coordinates Reverse (-)

15343006 .. 15345673

Gene Structure 2668 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G36590.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1311 bp

ATGAACTCTAAGAATCGCATAAACAATGTCGGGGAAGGTGTTGATATCGAAATCCCTGACACTGCTCATCAGATTAGCAGCGATTCATGGTTTCAGGCAGCGTTCGTTCTGACAACAAGTATAAACAGCGCATACGTGTTGGGATATTCAGGAACAGTCATGGTTCCTTTAGGATGGATTGGTGGTGTGGTTGGTCTTATTCTTGCTACTGCAATCTCACTCTATGCAAACACTCTCGTAGCCAAGCTTCATGAGTTTGGTGGCAAAAGACACATTCGCTATAGAGACCTTGCGGGATTCATTTACGGTAGAAAGGCTTATTGTCTTACATGGGTGTTGCAATATGTCAATCTTTTCATGATTAATTGTGGTTTCATCATACTAGCTGGTTCCGCCTTAAAGGCTGTTTATGTGCTTTTTAGGGATGATCATGCCATGAAGTTACCTCATTTTATAGCTATTGCGGGTCTGATTTGTGCGGTTTTTGCTATTGGAATTCCTCATTTGTCGGCTCTTGGGATATGGCTTGCGGTTTCGACTATCCTCAGCCTCATCTATATCGTTGTGGCAATCGTGCTATCGGTTAAAGATGGAGTTAAAGCACCTTCAAGAGATTACGAGATACAAGGATCACCACTAAGCAAACTTTTTACCATCACTGGAGCAGCCGCTACACTAGTTTTCGTATTCAACACAGGGATGCTTCCAGAAATTCAGGCAACAGTAAAGCAACCAGTAGTAAAAAACATGATGAAGGCTCTATACTTTCAATTCACGGTGGGTGTTTTACCGATGTTTGCGGTTGTATTCATCGGGTATTGGGCTTACGGATCCTCGACCTCGCCCTATCTACTAAACAACGTTAATGGTCCACTTTGGGTTAAAGCCCTTGCTAACATCTCCGCTATCCTTCAATCCGTTATCTCGTTGCACATTTTTGCAAGTCCAACATATGAGTACATGGACACCAAGTTTGGGATCAAAGGAAACCCATTGGCATTAAAGAACTTGTTGTTTAGGATCATGGCAAGAGGCGGGTACATAGCAGTTAGTACGCTTCTCTCAGCACTCTTGCCGTTCCTTGGGGACTTCATGAGCCTCACTGGTGCAGTGAGCACATTCCCCCTTACATTCATTCTAGCCAACCACATGTACTATAAGGCTAAGAACAATAAGCTCAATACTTTGCAAAAGCTATGCCATTGGCTCAACGTTGTCTTCTTCAGTTTGATGTCTGTTGCTGCCGCCATTGCAGCTCTTAGGCTCATCGCCCTTGACTCCAAAAACTTCCACGTTTTTGCAGATTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003333 GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006820 GO:0006855 GO:0006865 GO:0008150 GO:0008324 GO:0008509 GO:0008514 GO:0009628 GO:0015075 GO:0015171 GO:0015175 GO:0015179 GO:0015193 GO:0015238 GO:0015318 GO:0015711 GO:0015804 GO:0015807 GO:0015824 GO:0015849 GO:0015893 GO:0016020 GO:0022857 GO:0034220 GO:0035524 GO:0042221 GO:0042493 GO:0043090 GO:0044464 GO:0046942 GO:0046943 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:0080167 GO:0098655 GO:0098656 GO:1902475 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Aa_trans

Protein Analysis

436

Amino Acids

47.65

Weight (kDa)

9.46

Isoelectric Point (pI)

29.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aa_trans	PF01490	28 - 420	3.4e-92	Transmembrane amino acid transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006135)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36590 AT2G39890 AT2G39890 AT2G39890 AT3G55740 AT3G55740 AT3G55740
fragaria_vesca	FvH4_7g23780
malus_domestica	MD01G1145200.v1.1 MD07G1212200.v1.1
prunus_persica	Prupe.2G244500_v2.0.a1 Prupe.2G244500_v2.0.a1 Prupe.2G244500_v2.0.a1 Prupe.2G244500_v2.0.a1 Prupe.2G244500_v2.0.a1
pyrus_communis	pycom01g16470 pycom07g19520
rosa_chinensis	RchiOBHm_Chr1g0369121
rosa_laevigata	RLG00000027156
rosa_multiflora	Rmu_sc0004250.1_g000014
rosa_roxburghii	Rroxscaffold_4G00287980
rosa_rugosa	Rorug01G0348200
rosa_samantha	Rh1AG355000 Rh1BG318400 Rh1CG332700 Rh1DG349100
rosa_wichuraiana	Rw1G031330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AclI	AACGTT	2 cut(s)	861, 1212
AclWI	GGATC	5 cut(s)	637, 825, 838, 986, 1028
AcsI	RAATTY	2 cut(s)	495, 711
AcuI	CTGAAG	1 cut(s)	1207
AfaI	GTAC	4 cut(s)	959, 1040, 1054, 1154
AfiI	CCNNNNNNNGG	2 cut(s)	975, 1082
AflIII	ACRYGT	2 cut(s)	135, 1149
AgsI	TTSAA	4 cut(s)	609, 691, 770, 914
AhlI	ACTAGT	1 cut(s)	676
AluBI	AGCT	6 cut(s)	247, 386, 458, 1177, 1195, 1256
AluI	AGCT	6 cut(s)	247, 386, 458, 1177, 1195, 1256
Alw21I	GWGCWC	1 cut(s)	1118
Alw26I	GTCTC	1 cut(s)	279
AlwI	GGATC	5 cut(s)	637, 825, 838, 986, 1028
ApeKI	GCWGC	5 cut(s)	78, 98, 665, 1241, 1253
ApoI	RAATTY	2 cut(s)	495, 711
ArsI	GACNNNNNNTTYG	2 cut(s)	956, 988
AseI	ATTAAT	1 cut(s)	363
AspLEI	GCGC	1 cut(s)	131
AspS9I	GGNCC	1 cut(s)	869
AsuHPI	GGTGA	1 cut(s)	624
AvaII	GGWCC	1 cut(s)	869
BamHI	GGATCC	1 cut(s)	830
BarI	GAAGNNNNNNTAC	4 cut(s)	231, 263, 746, 778
BbsI	GAAGAC	1 cut(s)	1210
Bbv12I	GWGCWC	1 cut(s)	1118
BbvCI	CCTCAGC	1 cut(s)	545
BbvI	GCAGC	5 cut(s)	90, 110, 677, 1228, 1265
BccI	CCATC	3 cut(s)	168, 584, 662
BceAI	ACGGC	1 cut(s)	1060
BclI	TGATCA	1 cut(s)	427
BcoDI	GTCTC	1 cut(s)	279
BcuI	ACTAGT	1 cut(s)	676
BfaI	CTAG	3 cut(s)	383, 677, 1139
BfmI	CTRYAG	1 cut(s)	280
BglI	GCCNNNNNGGC	1 cut(s)	401
BisI	GCNGC	7 cut(s)	79, 99, 666, 669, 1242, 1245, 1254
BlsI	GCNGC	7 cut(s)	80, 100, 667, 670, 1243, 1246, 1255
Bme18I	GGWCC	1 cut(s)	869
BmgT120I	GGNCC	1 cut(s)	869
BmiI	GGNNCC	3 cut(s)	165, 391, 832
BmsI	GCATC	1 cut(s)	690
BpiI	GAAGAC	1 cut(s)	1210
BpmI	CTGGAG	1 cut(s)	681
Bpu10I	CCTNAGC	1 cut(s)	545
BsaAI	YACGTR	1 cut(s)	136
BsaI	GGTCTC	1 cut(s)	279
BsaJI	CCNNGG	1 cut(s)	1081
Bsc4I	CCNNNNNNNGG	2 cut(s)	975, 1082
Bse1I	ACTGG	3 cut(s)	664, 734, 1108
Bse3DI	GCAATG	1 cut(s)	1248
BseDI	CCNNGG	1 cut(s)	1081
BseGI	GGATG	3 cut(s)	179, 430, 705
BseLI	CCNNNNNNNGG	2 cut(s)	975, 1082
BseMI	GCAATG	1 cut(s)	1248
BseMII	CTCAG	2 cut(s)	559, 1077
BseNI	ACTGG	3 cut(s)	664, 734, 1108
BseXI	GCAGC	5 cut(s)	90, 110, 677, 1228, 1265
BsgI	GTGCAG	1 cut(s)	1128
BsiHKAI	GWGCWC	1 cut(s)	1118
BslFI	GGGAC	1 cut(s)	1100
BslI	CCNNNNNNNGG	2 cut(s)	975, 1082
BsmAI	GTCTC	1 cut(s)	279
BsmFI	GGGAC	1 cut(s)	1100
Bso31I	GGTCTC	1 cut(s)	279
Bsp1286I	GDGCHC	1 cut(s)	1118
Bsp143I	GATC	5 cut(s)	427, 629, 830, 978, 1020
BspCNI	CTCAG	2 cut(s)	558, 1076
BspHI	TCATGA	3 cut(s)	250, 357, 1092
BspLI	GGNNCC	3 cut(s)	165, 391, 832
BspPI	GGATC	5 cut(s)	637, 825, 838, 986, 1028
BspTNI	GGTCTC	1 cut(s)	279
BsrDI	GCAATG	1 cut(s)	1248
BsrI	ACTGG	3 cut(s)	664, 734, 1108
BssECI	CCNNGG	1 cut(s)	1081
BssMI	GATC	5 cut(s)	427, 629, 830, 978, 1020
BssT1I	CCWWGG	1 cut(s)	1081
Bst4CI	ACNGT	4 cut(s)	157, 308, 724, 778
BstBAI	YACGTR	1 cut(s)	136
BstC8I	GCNNGC	1 cut(s)	528
BstDEI	CTNAG	6 cut(s)	9, 545, 638, 1063, 1164, 1259
BstF5I	GGATG	3 cut(s)	179, 430, 705
BstHHI	GCGC	1 cut(s)	131
BstKTI	GATC	5 cut(s)	430, 632, 833, 981, 1023
BstMAI	GTCTC	1 cut(s)	279
BstMBI	GATC	5 cut(s)	427, 629, 830, 978, 1020
BstMWI	GCNNNNNNNGC	5 cut(s)	392, 401, 485, 1250, 1253
BstNSI	RCATGY	1 cut(s)	1153
BstSFI	CTRYAG	1 cut(s)	280
BstV1I	GCAGC	5 cut(s)	90, 110, 677, 1228, 1265
BstV2I	GAAGAC	1 cut(s)	1210
BstX2I	RGATCY	1 cut(s)	830
BstYI	RGATCY	1 cut(s)	830
BtgZI	GCGATG	1 cut(s)	1252
BtsCI	GGATG	3 cut(s)	179, 430, 705
BtsI	GCAGTG	2 cut(s)	60, 1116
BtsIMutI	CAGTG	4 cut(s)	60, 657, 1101, 1116
Cac8I	GCNNGC	1 cut(s)	528
CciI	TCATGA	3 cut(s)	250, 357, 1092
CfoI	GCGC	1 cut(s)	131
Cfr13I	GGNCC	1 cut(s)	869
Csp6I	GTAC	4 cut(s)	958, 1039, 1053, 1153
CviQI	GTAC	4 cut(s)	958, 1039, 1053, 1153
DdeI	CTNAG	6 cut(s)	9, 545, 638, 1063, 1164, 1259
DpnI	GATC	5 cut(s)	429, 631, 832, 980, 1022
DpnII	GATC	5 cut(s)	427, 629, 830, 978, 1020
EciI	GGCGGA	1 cut(s)	382
Eco130I	CCWWGG	1 cut(s)	1081
Eco31I	GGTCTC	1 cut(s)	279
Eco32I	GATATC	1 cut(s)	46
Eco47I	GGWCC	1 cut(s)	869
Eco57I	CTGAAG	1 cut(s)	1207
EcoRI	GAATTC	1 cut(s)	495
EcoRV	GATATC	1 cut(s)	46
EcoT14I	CCWWGG	1 cut(s)	1081
ErhI	CCWWGG	1 cut(s)	1081
FaqI	GGGAC	1 cut(s)	1100
FauI	CCCGC	3 cut(s)	286, 457, 1028
FauNDI	CATATG	1 cut(s)	952
FbaI	TGATCA	1 cut(s)	427
Fnu4HI	GCNGC	7 cut(s)	79, 99, 666, 669, 1242, 1245, 1254
FokI	GGATG	3 cut(s)	186, 437, 712
Fsp4HI	GCNGC	7 cut(s)	79, 99, 666, 669, 1242, 1245, 1254
FspBI	CTAG	3 cut(s)	383, 677, 1139
GlaI	GCGC	1 cut(s)	130
GluI	GCNGC	7 cut(s)	79, 99, 666, 669, 1242, 1245, 1254
GsuI	CTGGAG	1 cut(s)	681
HhaI	GCGC	1 cut(s)	131
Hin6I	GCGC	1 cut(s)	129
HinP1I	GCGC	1 cut(s)	129
HindIII	AAGCTT	1 cut(s)	245
HinfI	GANTC	4 cut(s)	13, 83, 297, 1277
HphI	GGTGA	1 cut(s)	624
Hpy166II	GTNNAC	1 cut(s)	872
Hpy188I	TCNGA	3 cut(s)	72, 111, 471
Hpy188III	TCNNGA	6 cut(s)	150, 251, 358, 609, 707, 1093
Hpy8I	GTNNAC	1 cut(s)	872
HpyAV	CCTTC	4 cut(s)	29, 615, 748, 920
HpyCH4III	ACNGT	4 cut(s)	157, 308, 724, 778
HpyCH4IV	ACGT	4 cut(s)	135, 861, 1212, 1293
HpyCH4V	TGCA	9 cut(s)	212, 227, 340, 931, 941, 1109, 1189, 1253, 1301
HpyF10VI	GCNNNNNNNGC	5 cut(s)	392, 401, 485, 1250, 1253
HpyF3I	CTNAG	6 cut(s)	9, 545, 638, 1063, 1164, 1259
HpySE526I	ACGT	4 cut(s)	135, 861, 1212, 1293
HspAI	GCGC	1 cut(s)	129
Ksp22I	TGATCA	1 cut(s)	427
Kzo9I	GATC	5 cut(s)	427, 629, 830, 978, 1020
LmnI	GCTCC	1 cut(s)	662
Lsp1109I	GCAGC	5 cut(s)	90, 110, 677, 1228, 1265
LweI	GCATC	1 cut(s)	690
MaeI	CTAG	3 cut(s)	383, 677, 1139
MaeII	ACGT	4 cut(s)	135, 861, 1212, 1293
MaeIII	GTNAC	1 cut(s)	441
MalI	GATC	5 cut(s)	429, 631, 832, 980, 1022
MboI	GATC	5 cut(s)	427, 629, 830, 978, 1020
MboII	GAAGA	2 cut(s)	1210, 1213
MflI	RGATCY	1 cut(s)	830
MhlI	GDGCHC	1 cut(s)	1118
MluCI	AATT	4 cut(s)	364, 495, 711, 770
MlyI	GAGTC	1 cut(s)	1271
MmeI	TCCRAC	1 cut(s)	971
MnlI	CCTC	8 cut(s)	456, 510, 554, 560, 844, 850, 1025, 1109
MseI	TTAA	7 cut(s)	363, 398, 585, 597, 864, 882, 1001
MslI	CAYNNNNRTG	1 cut(s)	698
MwoI	GCNNNNNNNGC	5 cut(s)	392, 401, 485, 1250, 1253
NdeI	CATATG	1 cut(s)	952
NdeII	GATC	5 cut(s)	427, 629, 830, 978, 1020
NlaIV	GGNNCC	3 cut(s)	165, 391, 832
NspI	RCATGY	1 cut(s)	1153
PagI	TCATGA	3 cut(s)	250, 357, 1092
PciI	ACATGT	1 cut(s)	1149
PfeI	GAWTC	3 cut(s)	13, 83, 297
PkrI	GCNGC	7 cut(s)	80, 100, 667, 670, 1243, 1246, 1255
PleI	GAGTC	1 cut(s)	1271
PpsI	GAGTC	1 cut(s)	1271
Ppu21I	YACGTR	1 cut(s)	136
PscI	ACATGT	1 cut(s)	1149
PshBI	ATTAAT	1 cut(s)	363
Psp1406I	AACGTT	2 cut(s)	861, 1212
PspN4I	GGNNCC	3 cut(s)	165, 391, 832
PspPI	GGNCC	1 cut(s)	869
PsuI	RGATCY	1 cut(s)	830
RsaI	GTAC	4 cut(s)	959, 1040, 1054, 1154
RsaNI	GTAC	4 cut(s)	958, 1039, 1053, 1153
RseI	CAYNNNNRTG	1 cut(s)	698
SaqAI	TTAA	7 cut(s)	363, 398, 585, 597, 864, 882, 1001
SatI	GCNGC	7 cut(s)	79, 99, 666, 669, 1242, 1245, 1254
Sau3AI	GATC	5 cut(s)	427, 629, 830, 978, 1020
Sau96I	GGNCC	1 cut(s)	869
SchI	GAGTC	1 cut(s)	1271
SduI	GDGCHC	1 cut(s)	1118
SfaNI	GCATC	1 cut(s)	690
SfcI	CTRYAG	1 cut(s)	280
SinI	GGWCC	1 cut(s)	869
SmiMI	CAYNNNNRTG	1 cut(s)	698
SpeI	ACTAGT	1 cut(s)	676
Sse9I	AATT	4 cut(s)	364, 495, 711, 770
SspMI	CTAG	3 cut(s)	383, 677, 1139
StyI	CCWWGG	1 cut(s)	1081
TaaI	ACNGT	4 cut(s)	157, 308, 724, 778
TaiI	ACGT	4 cut(s)	138, 864, 1215, 1296
TaqI	TCGA	3 cut(s)	48, 536, 836
TasI	AATT	4 cut(s)	364, 495, 711, 770
TatI	WGTACW	2 cut(s)	957, 1152
TauI	GCSGC	2 cut(s)	671, 1247
TfiI	GAWTC	3 cut(s)	13, 83, 297
Tru1I	TTAA	7 cut(s)	363, 398, 585, 597, 864, 882, 1001
Tru9I	TTAA	7 cut(s)	363, 398, 585, 597, 864, 882, 1001
TscAI	CASTG	4 cut(s)	67, 664, 1108, 1116
TseI	GCWGC	5 cut(s)	78, 98, 665, 1241, 1253
TspGWI	ACGGA	2 cut(s)	843, 907
TspRI	CASTG	4 cut(s)	67, 664, 1108, 1116
VpaK11BI	GGWCC	1 cut(s)	869
VspI	ATTAAT	1 cut(s)	363
XapI	RAATTY	2 cut(s)	495, 711
XceI	RCATGY	1 cut(s)	1153
XspI	CTAG	3 cut(s)	383, 677, 1139

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.