Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0006135

Physical Location & Seq

Genomic Coordinates Forward (+)

26232757 .. 26236042

Gene Structure 3286 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G244500.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1323 bp

ATGGATGCTACTAGTGAAGTCTATTCTGGTTCTAGAAAGCTTCATGAGGAAGAAACTGCCGAAATCCCAGAAACCGCCCATCAGATTAGCACAGATTCATGGTTTCAAGTGGGATTTGTCCTCACCACCGGTATCAACAGTGCGTATGTGCTGGGATACTCTGGAAATGTAATGATTCCTCTGGGTTGGATAGGCGGTGTAATCGGTCTAATTCTAGCCACTGCAATATCACTCTATGCAAACGCTCTTATTGCTAAGCTCCATGAATATGGTGGGGTTAGGCACATCAGATACAGAGATCTTGCAGGATTTATATATGGCAAGAAAGCTTATTCACTTACATGGGGATTGCAATATGTCAATCTTTTCATGATTAACACGGGATTTATCATTTTGGCTGGTCAGGCCCTCAAGGCTGCGTATGTTCTGTTCAAGGATGACCACGCCATGAAGCTTCCGCATTTTATTGCCATTTCTGGCGTTGTTTGTGCAATATTTGCTATAGGGATACCACACTTGTCAGCTCTCAGGATTTGGCTGGGGTTTTCAACAGTCTTCAGCTTGATATATATTGTTATAGCATTCGTCTTGTCACTTCAAGATGGACTTGAAGCACCGGCCAGGAGTTATGACATCCCGGGGACAAAAATAAGCAGAATATTTACCACAATCGGAGCGGCTGCTAGCCTGGTCTTTGCATTCAACACAGGAATGCTACCAGAGATACAGGCTACAGTGAGGAAGCCAGTTGTTGAAAACATGATGAAGGCTCTGTACTTTCAGTTTACAGCTGGAGTTGTGCCACTGTATGCCGTTTGTTTTGTAGGGTATTGGGCATATGGAAATAAAACATCATCTTATTTGCTCAACAATGTCAACGGGCCGATTTGGGTGAAGGCAATGGCCAATATTGCTGCCTTCCTGCAAACAGTCATTGCTTTGCATATATTTGCAAGTCCAATGTATGAGTATCTGGACACAAAGTTTGGTATTAAAGGAAGTCCACTGAAAATTCAGAACTTAACATTCAGAATTACTGTTAGAGGTGGCTACTTAGCCATTAACACACTGGTTTCAGCCCTTCTGCCATTCCTTGGAGATTTCATGAGCCTCACGGGAGCCATCAGCACATTCCCTCTCACATTTATTCTTGCAAACCACATGTACCTGGTGGCAAAGAAGGACACACTCACTTCCGCGCAAAAGCTCTGGCATTGGCTAAATGTTGGTTTCTTTGCCCTTTTGGCCGTTGCAGCTTTAATCTCAGCCTTGAGGCTCATAGCAGTAGATTCTAAAACTTACCATGTATTTGCTGATCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003333 GO:0003674 GO:0005215 GO:0005342 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006820 GO:0006855 GO:0006865 GO:0008150 GO:0008324 GO:0008509 GO:0008514 GO:0009628 GO:0015075 GO:0015171 GO:0015175 GO:0015179 GO:0015193 GO:0015238 GO:0015318 GO:0015711 GO:0015804 GO:0015807 GO:0015824 GO:0015849 GO:0015893 GO:0016020 GO:0022857 GO:0034220 GO:0035524 GO:0042221 GO:0042493 GO:0043090 GO:0044464 GO:0046942 GO:0046943 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:0080167 GO:0098655 GO:0098656 GO:1902475 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Aa_trans

Protein Analysis

441

Amino Acids

48.24

Weight (kDa)

9.13

Isoelectric Point (pI)

26.16

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006135)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36590 AT2G39890 AT2G39890 AT2G39890 AT3G55740 AT3G55740 AT3G55740
fragaria_vesca	FvH4_7g23780
malus_domestica	MD01G1145200.v1.1 MD07G1212200.v1.1
prunus_persica	Prupe.2G244500_v2.0.a1 Prupe.2G244500_v2.0.a1 Prupe.2G244500_v2.0.a1 Prupe.2G244500_v2.0.a1 Prupe.2G244500_v2.0.a1
pyrus_communis	pycom01g16470 pycom07g19520
rosa_chinensis	RchiOBHm_Chr1g0369121
rosa_laevigata	RLG00000027156
rosa_multiflora	Rmu_sc0004250.1_g000014
rosa_roxburghii	Rroxscaffold_4G00287980
rosa_rugosa	Rorug01G0348200
rosa_samantha	Rh1AG355000 Rh1BG318400 Rh1CG332700 Rh1DG349100
rosa_wichuraiana	Rw1G031330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1094
AccBSI	CCGCTC	1 cut(s)	677
AccII	CGCG	1 cut(s)	1199
AciI	CCGC	5 cut(s)	75, 195, 458, 677, 1197
AcoI	YGGCCR	3 cut(s)	618, 903, 1245
AcsI	RAATTY	1 cut(s)	1011
AcuI	CTGAAG	1 cut(s)	541
AfaI	GTAC	2 cut(s)	776, 1166
AfiI	CCNNNNNNNGG	1 cut(s)	1094
AflIII	ACRYGT	1 cut(s)	1161
AgeI	ACCGGT	1 cut(s)	128
AgsI	TTSAA	7 cut(s)	107, 433, 549, 599, 611, 703, 755
AhlI	ACTAGT	1 cut(s)	11
AjnI	CCWGG	3 cut(s)	620, 687, 1167
AluBI	AGCT	9 cut(s)	40, 259, 329, 454, 524, 561, 791, 1207, 1256
AluI	AGCT	9 cut(s)	40, 259, 329, 454, 524, 561, 791, 1207, 1256
Ama87I	CYCGRG	1 cut(s)	637
AoxI	GGCC	5 cut(s)	405, 618, 881, 903, 1245
ApeKI	GCWGC	4 cut(s)	416, 680, 914, 1253
ApoI	RAATTY	1 cut(s)	1011
ArsI	GACNNNNNNTTYG	2 cut(s)	968, 1000
AsiGI	ACCGGT	1 cut(s)	128
AspLEI	GCGC	1 cut(s)	1201
AspS9I	GGNCC	2 cut(s)	406, 881
AsuC2I	CCSGG	2 cut(s)	638, 639
AsuHPI	GGTGA	2 cut(s)	115, 904
AsuNHI	GCTAGC	1 cut(s)	683
AvaI	CYCGRG	1 cut(s)	637
BalI	TGGCCA	1 cut(s)	905
BarI	GAAGNNNNNNTAC	2 cut(s)	758, 790
BbsI	GAAGAC	1 cut(s)	547
BbvI	GCAGC	4 cut(s)	403, 667, 901, 1265
BccI	CCATC	3 cut(s)	87, 596, 1130
BceAI	ACGGC	2 cut(s)	797, 1232
BciT130I	CCWGG	3 cut(s)	622, 689, 1169
BciVI	GTATCC	2 cut(s)	149, 501
BcnI	CCSGG	2 cut(s)	638, 639
BcuI	ACTAGT	1 cut(s)	11
BfaI	CTAG	4 cut(s)	12, 33, 215, 684
BfmI	CTRYAG	2 cut(s)	501, 732
BfuI	GTATCC	2 cut(s)	149, 501
BglI	GCCNNNNNGGC	2 cut(s)	413, 1244
BglII	AGATCT	1 cut(s)	298
BisI	GCNGC	5 cut(s)	417, 678, 681, 915, 1254
BlpI	GCTNAGC	1 cut(s)	255
BlsI	GCNGC	5 cut(s)	418, 679, 682, 916, 1255
Bme1390I	CCNGG	5 cut(s)	622, 638, 639, 689, 1169
BmeT110I	CYCGRG	1 cut(s)	637
BmgT120I	GGNCC	2 cut(s)	406, 881
BmiI	GGNNCC	1 cut(s)	1120
BmrFI	CCNGG	5 cut(s)	622, 638, 639, 689, 1169
BmtI	GCTAGC	1 cut(s)	687
BpiI	GAAGAC	1 cut(s)	547
BpmI	CTGGAG	1 cut(s)	813
Bpu1102I	GCTNAGC	1 cut(s)	255
BpuEI	CTTGAG	2 cut(s)	395, 1291
BpuMI	CCSGG	2 cut(s)	638, 639
BsaJI	CCNNGG	3 cut(s)	637, 638, 1093
BsaWI	WCCGGW	1 cut(s)	128
Bsc4I	CCNNNNNNNGG	1 cut(s)	1094
Bse118I	RCCGGY	2 cut(s)	128, 616
Bse1I	ACTGG	2 cut(s)	746, 1074
Bse3DI	GCAATG	2 cut(s)	906, 933
BseBI	CCWGG	3 cut(s)	622, 689, 1169
BseDI	CCNNGG	3 cut(s)	637, 638, 1093
BseGI	GGATG	3 cut(s)	10, 442, 633
BseLI	CCNNNNNNNGG	1 cut(s)	1094
BseMI	GCAATG	2 cut(s)	906, 933
BseMII	CTCAG	2 cut(s)	541, 1278
BseNI	ACTGG	2 cut(s)	746, 1074
BseXI	GCAGC	4 cut(s)	403, 667, 901, 1265
BseYI	CCCAGC	2 cut(s)	151, 538
Bsh1236I	CGCG	1 cut(s)	1199
BshFI	GGCC	5 cut(s)	407, 620, 883, 905, 1247
BshTI	ACCGGT	1 cut(s)	128
BsiHKCI	CYCGRG	1 cut(s)	637
BsiSI	CCGG	3 cut(s)	129, 617, 638
BslFI	GGGAC	1 cut(s)	655
BslI	CCNNNNNNNGG	1 cut(s)	1094
BsmFI	GGGAC	1 cut(s)	655
BsmI	GAATGC	3 cut(s)	581, 698, 717
BsnI	GGCC	5 cut(s)	407, 620, 883, 905, 1247
BsoBI	CYCGRG	1 cut(s)	637
Bsp143I	GATC	2 cut(s)	298, 1315
Bsp1720I	GCTNAGC	1 cut(s)	255
BspACI	CCGC	5 cut(s)	75, 195, 458, 677, 1197
BspANI	GGCC	5 cut(s)	407, 620, 883, 905, 1247
BspCNI	CTCAG	2 cut(s)	540, 1277
BspFNI	CGCG	1 cut(s)	1199
BspHI	TCATGA	3 cut(s)	43, 369, 1104
BspLI	GGNNCC	1 cut(s)	1120
BspOI	GCTAGC	1 cut(s)	687
BsrBI	CCGCTC	1 cut(s)	677
BsrDI	GCAATG	2 cut(s)	906, 933
BsrFI	RCCGGY	2 cut(s)	128, 616
BsrI	ACTGG	2 cut(s)	746, 1074
BssAI	RCCGGY	2 cut(s)	128, 616
BssECI	CCNNGG	3 cut(s)	637, 638, 1093
BssMI	GATC	2 cut(s)	298, 1315
BssT1I	CCWWGG	1 cut(s)	1093
Bst2UI	CCWGG	3 cut(s)	622, 689, 1169
Bst4CI	ACNGT	6 cut(s)	140, 553, 736, 807, 931, 1039
BstAPI	GCANNNNNTGC	1 cut(s)	497
BstC8I	GCNNGC	1 cut(s)	685
BstDEI	CTNAG	4 cut(s)	255, 527, 1054, 1264
BstF5I	GGATG	3 cut(s)	10, 442, 633
BstFNI	CGCG	1 cut(s)	1199
BstHHI	GCGC	1 cut(s)	1201
BstKTI	GATC	2 cut(s)	301, 1318
BstMBI	GATC	2 cut(s)	298, 1315
BstMWI	GCNNNNNNNGC	7 cut(s)	251, 404, 413, 497, 911, 1244, 1253
BstNI	CCWGG	3 cut(s)	622, 689, 1169
BstNSI	RCATGY	1 cut(s)	1165
BstSCI	CCNGG	5 cut(s)	620, 636, 637, 687, 1167
BstSFI	CTRYAG	2 cut(s)	501, 732
BstUI	CGCG	1 cut(s)	1199
BstV1I	GCAGC	4 cut(s)	403, 667, 901, 1265
BstV2I	GAAGAC	1 cut(s)	547
BstX2I	RGATCY	1 cut(s)	298
BstXI	CCANNNNNNTGG	1 cut(s)	269
BstYI	RGATCY	1 cut(s)	298
BsuI	GTATCC	2 cut(s)	149, 501
BsuRI	GGCC	5 cut(s)	407, 620, 883, 905, 1247
BtsCI	GGATG	3 cut(s)	10, 442, 633
BtsI	GCAGTG	1 cut(s)	219
BtsIMutI	CAGTG	6 cut(s)	145, 219, 741, 803, 1004, 1067
Cac8I	GCNNGC	1 cut(s)	685
CciI	TCATGA	3 cut(s)	43, 369, 1104
CfoI	GCGC	1 cut(s)	1201
Cfr10I	RCCGGY	2 cut(s)	128, 616
Cfr13I	GGNCC	2 cut(s)	406, 881
Cfr9I	CCCGGG	1 cut(s)	637
CsiI	ACCWGGT	1 cut(s)	1167
Csp6I	GTAC	2 cut(s)	775, 1165
CspAI	ACCGGT	1 cut(s)	128
CviQI	GTAC	2 cut(s)	775, 1165
DdeI	CTNAG	4 cut(s)	255, 527, 1054, 1264
DpnI	GATC	2 cut(s)	300, 1317
DpnII	GATC	2 cut(s)	298, 1315
EaeI	YGGCCR	3 cut(s)	618, 903, 1245
Eco130I	CCWWGG	1 cut(s)	1093
Eco57I	CTGAAG	1 cut(s)	541
Eco88I	CYCGRG	1 cut(s)	637
EcoO109I	RGGNCCY	1 cut(s)	406
EcoRII	CCWGG	3 cut(s)	620, 687, 1167
EcoT14I	CCWWGG	1 cut(s)	1093
ErhI	CCWWGG	1 cut(s)	1093
FalI	AAGNNNNNCTT	2 cut(s)	591, 623
FaqI	GGGAC	1 cut(s)	655
FauNDI	CATATG	1 cut(s)	838
Fnu4HI	GCNGC	5 cut(s)	417, 678, 681, 915, 1254
FokI	GGATG	3 cut(s)	17, 449, 620
Fsp4HI	GCNGC	5 cut(s)	417, 678, 681, 915, 1254
FspBI	CTAG	4 cut(s)	12, 33, 215, 684
GlaI	GCGC	1 cut(s)	1200
GluI	GCNGC	5 cut(s)	417, 678, 681, 915, 1254
GsaI	CCCAGC	2 cut(s)	155, 542
GsuI	CTGGAG	1 cut(s)	813
HaeIII	GGCC	5 cut(s)	407, 620, 883, 905, 1247
HapII	CCGG	3 cut(s)	129, 617, 638
HhaI	GCGC	1 cut(s)	1201
Hin6I	GCGC	1 cut(s)	1199
HinP1I	GCGC	1 cut(s)	1199
HincII	GTYRAC	1 cut(s)	877
HindII	GTYRAC	1 cut(s)	877
HindIII	AAGCTT	3 cut(s)	38, 327, 452
HinfI	GANTC	3 cut(s)	95, 175, 1289
HpaII	CCGG	3 cut(s)	129, 617, 638
HphI	GGTGA	2 cut(s)	115, 904
Hpy166II	GTNNAC	3 cut(s)	786, 877, 1004
Hpy188I	TCNGA	5 cut(s)	84, 290, 674, 1017, 1031
Hpy188III	TCNNGA	8 cut(s)	33, 44, 162, 370, 529, 599, 974, 1105
Hpy8I	GTNNAC	3 cut(s)	786, 877, 1004
HpyAV	CCTTC	5 cut(s)	760, 889, 928, 1091, 1174
HpyCH4III	ACNGT	6 cut(s)	140, 553, 736, 807, 931, 1039
HpyF10VI	GCNNNNNNNGC	7 cut(s)	251, 404, 413, 497, 911, 1244, 1253
HpyF3I	CTNAG	4 cut(s)	255, 527, 1054, 1264
HspAI	GCGC	1 cut(s)	1199
Kzo9I	GATC	2 cut(s)	298, 1315
LmnI	GCTCC	3 cut(s)	264, 674, 1118
Lsp1109I	GCAGC	4 cut(s)	403, 667, 901, 1265
MabI	ACCWGGT	1 cut(s)	1167
MaeI	CTAG	4 cut(s)	12, 33, 215, 684
MaeIII	GTNAC	1 cut(s)	591
MalI	GATC	2 cut(s)	300, 1317
MbiI	CCGCTC	1 cut(s)	677
MboI	GATC	2 cut(s)	298, 1315
MboII	GAAGA	2 cut(s)	62, 547
MflI	RGATCY	1 cut(s)	298
MlsI	TGGCCA	1 cut(s)	905
MluCI	AATT	3 cut(s)	210, 1011, 1032
MluNI	TGGCCA	1 cut(s)	905
MmeI	TCCRAC	1 cut(s)	167
MnlI	CCTC	9 cut(s)	40, 131, 189, 419, 732, 1037, 1121, 1146, 1266
Mox20I	TGGCCA	1 cut(s)	905
MscI	TGGCCA	1 cut(s)	905
MseI	TTAA	5 cut(s)	375, 993, 1022, 1062, 1259
MslI	CAYNNNNRTG	3 cut(s)	267, 340, 710
Msp20I	TGGCCA	1 cut(s)	905
MspA1I	CMGCKG	1 cut(s)	791
MspI	CCGG	3 cut(s)	129, 617, 638
MspR9I	CCNGG	5 cut(s)	622, 638, 639, 689, 1169
Mva1269I	GAATGC	3 cut(s)	581, 698, 717
MvaI	CCWGG	3 cut(s)	622, 689, 1169
MvnI	CGCG	1 cut(s)	1199
MwoI	GCNNNNNNNGC	7 cut(s)	251, 404, 413, 497, 911, 1244, 1253
NciI	CCSGG	2 cut(s)	638, 639
NdeI	CATATG	1 cut(s)	838
NdeII	GATC	2 cut(s)	298, 1315
NheI	GCTAGC	1 cut(s)	683
NlaIV	GGNNCC	1 cut(s)	1120
NmuCI	GTSAC	1 cut(s)	591
NspI	RCATGY	1 cut(s)	1165
PagI	TCATGA	3 cut(s)	43, 369, 1104
PciI	ACATGT	1 cut(s)	1161
PctI	GAATGC	3 cut(s)	581, 698, 717
PfeI	GAWTC	3 cut(s)	95, 175, 1289
PflMI	CCANNNNNTGG	1 cut(s)	1094
PinAI	ACCGGT	1 cut(s)	128
PkrI	GCNGC	5 cut(s)	418, 679, 682, 916, 1255
PscI	ACATGT	1 cut(s)	1161
Psp6I	CCWGG	3 cut(s)	620, 687, 1167
PspFI	CCCAGC	2 cut(s)	151, 538
PspGI	CCWGG	3 cut(s)	620, 687, 1167
PspN4I	GGNNCC	1 cut(s)	1120
PspPI	GGNCC	2 cut(s)	406, 881
PsrI	GAACNNNNNNTAC	2 cut(s)	413, 445
PsuI	RGATCY	1 cut(s)	298
PvuII	CAGCTG	1 cut(s)	791
RsaI	GTAC	2 cut(s)	776, 1166
RsaNI	GTAC	2 cut(s)	775, 1165
RseI	CAYNNNNRTG	3 cut(s)	267, 340, 710
SaqAI	TTAA	5 cut(s)	375, 993, 1022, 1062, 1259
SatI	GCNGC	5 cut(s)	417, 678, 681, 915, 1254
Sau3AI	GATC	2 cut(s)	298, 1315
Sau96I	GGNCC	2 cut(s)	406, 881
ScrFI	CCNGG	5 cut(s)	622, 638, 639, 689, 1169
SexAI	ACCWGGT	1 cut(s)	1167
SfcI	CTRYAG	2 cut(s)	501, 732
SmaI	CCCGGG	1 cut(s)	639
SmiMI	CAYNNNNRTG	3 cut(s)	267, 340, 710
SmlI	CTYRAG	2 cut(s)	410, 1270
SmoI	CTYRAG	2 cut(s)	410, 1270
SpeI	ACTAGT	1 cut(s)	11
Sse9I	AATT	3 cut(s)	210, 1011, 1032
SsiI	CCGC	5 cut(s)	75, 195, 458, 677, 1197
SspI	AATATT	3 cut(s)	495, 660, 910
SspMI	CTAG	4 cut(s)	12, 33, 215, 684
StyD4I	CCNGG	5 cut(s)	620, 636, 637, 687, 1167
StyI	CCWWGG	1 cut(s)	1093
TaaI	ACNGT	6 cut(s)	140, 553, 736, 807, 931, 1039
TaqII	GACCGA	1 cut(s)	194
TasI	AATT	3 cut(s)	210, 1011, 1032
TatI	WGTACW	1 cut(s)	774
TauI	GCSGC	1 cut(s)	680
TfiI	GAWTC	3 cut(s)	95, 175, 1289
Tru1I	TTAA	5 cut(s)	375, 993, 1022, 1062, 1259
Tru9I	TTAA	5 cut(s)	375, 993, 1022, 1062, 1259
TscAI	CASTG	6 cut(s)	145, 226, 741, 810, 1011, 1074
TseFI	GTSAC	1 cut(s)	591
TseI	GCWGC	4 cut(s)	416, 680, 914, 1253
Tsp45I	GTSAC	1 cut(s)	591
TspDTI	ATGAA	7 cut(s)	32, 87, 279, 358, 464, 779, 1093
TspMI	CCCGGG	1 cut(s)	637
TspRI	CASTG	6 cut(s)	145, 226, 741, 810, 1011, 1074
Van91I	CCANNNNNTGG	1 cut(s)	1094
XapI	RAATTY	1 cut(s)	1011
XbaI	TCTAGA	1 cut(s)	32
XceI	RCATGY	1 cut(s)	1165
XcmI	CCANNNNNNNNNTGG	2 cut(s)	269, 1066
XmaI	CCCGGG	1 cut(s)	637
XspI	CTAG	4 cut(s)	12, 33, 215, 684

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.