pycom01g16470

Proline transporter

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
16048929 .. 16051811
2883 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g16470.5

Sequence Viewer

Length: 1494 bp
ATGGTCAGAATGGTCACACACTCCCAGAGAGAAAGCGGGTGGGGAACCAAATCTAACGAACCCCCACGCCTGGGGCCTATAAAAAGGAGGGATACGCTGGCAGTTACTGATATCTCGGAAGCAGAGGAGGAGGCGGAGCCAGCGGAGGAGGACGGGGAAGAGCAGATAACCATCACCGAGTGGCTCCTGGCGGGGCAAGGACATCCTCGAGAGTCGACTATGGATTCTACCAGTGAAGCTCATTCCGGTTCTAGGAAGGTTCATGATGAAGAAAGTACCGAAATCCCAGAAACCGCTCATCAGATTAGCACAGATTCATGGTTTCAAGTGGGATTCGTCCTCACCACCGGTATCAACAGTGCGTATGTTCTGGGATACTCAGGAAATGTCATGATTCCTCTTGGTTGGACCGGCGGTGTGATCGGTTTAATTCTAGCCACTGCAATATCACTCTATGCAAATGCTCTCATTGCCAAGCTTCATGAGTATGGAGGGGTTAGGCACATCAGATACAGAGACCTTGCTGGATTTATATATGGCAAGAAAGCTTACTCTCTGACATGGGGATTGCAATATGTCAATCTCTTCATGATTAACACTGGTTTTATCATCTTGGCTGGTCAGGCACTCAAGGCTGTGTATGTTCTGTTTAGGGATGACCATACCATGAAGCTACCACATTTTATTGCCATTTCCGGCTTTGTGTGCACTGTATTTGCCATAAGTATACCGCACTTGTCAGCTCTGAGGATTTGGCTGGGGTTTTCAACAGTCTTCAGCTTGATGTATATTGTTATAGCAATCGCTCTGTCACTTAAAGATGGTAAGGATCATCTCACGTTCTTTCTTCCGTACGACTTGAACAAGTGTATAAATTTTCTGGATGTTTCACGCTTTGAGGCTACAGTGAGGAAGCCAGTGGTTGACAACATGATGAAAGCTCTGTACTTTCAGTTCACCGCCGGTGTTGTGCCGTTGTATGCCGTCTGTTTTATAGGTTATTGGGCATATGGAAATAACACATCATCTTATCTGCTCAACAACGTCAACGGACCGGTCTGGGTGAAGGCGATGGCCAATTTTGCTGCCTTCCTGCAAACAGTCATTGCCCTGCATATATTTGCAAGTCCAATGTACGAATATCTGGATACAAAGTTCGGCATCAAAGGAAGTCCGCTGAAAATTCAGAACTTGACATTCAGAATCACCGTTCGAGGCGGCTACTTGGCGATTAACACGCTGGTTTCGGCTCTGCTGCCGTTCCTCGGAGATTTCATGAGCCTCACAGGAGCCATAAGCACATTCCCCCTCACATTTATTCTTGCAAACCACATGTATTTGGTGGCAAAGAAGGAGAAGCTGACTTCTGCACAGAAGTGCTGGCATTGGCTGAATGTCGGCTTCTTCGGCCTTTTGGCTGTTGCAGCTTTGATTTCGGCCTTGAGGCTCATAGCCGTAGACTCCAAAACTTACCACGTATTTGCTGATCTATGA

Protein Analysis

498

Amino Acids

55.2

Weight (kDa)

6.95

Isoelectric Point (pI)

29.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 296
AccI GTMKAC 3 cut(s) 215, 727, 1458
AclWI GGATC 1 cut(s) 837
AcoI YGGCCR 1 cut(s) 1074
AcsI RAATTY 2 cut(s) 874, 1182
AcuI CTGAAG 1 cut(s) 760
AdeI CACNNNGTG 1 cut(s) 180
AfaI GTAC 4 cut(s) 277, 854, 947, 1136
AfiI CCNNNNNNNGG 4 cut(s) 70, 71, 252, 1265
AflIII ACRYGT 1 cut(s) 1332
AgeI ACCGGT 2 cut(s) 347, 1054
AgsI TTSAA 3 cut(s) 326, 768, 862
AjnI CCWGG 2 cut(s) 69, 186
AleI CACNNNNGTG 1 cut(s) 1375
AloI GAACNNNNNNTCC 2 cut(s) 1139, 1171
AluBI AGCT 9 cut(s) 239, 478, 548, 673, 743, 780, 941, 1360, 1427
AluI AGCT 9 cut(s) 239, 478, 548, 673, 743, 780, 941, 1360, 1427
Alw21I GWGCWC 1 cut(s) 710
Alw26I GTCTC 1 cut(s) 510
Alw44I GTGCAC 1 cut(s) 706
AlwI GGATC 1 cut(s) 837
AlwNI CAGNNNCTG 1 cut(s) 107
Ama87I CYCGRG 1 cut(s) 207
AoxI GGCC 4 cut(s) 74, 1074, 1408, 1437
ApaLI GTGCAC 1 cut(s) 706
ApeKI GCWGC 3 cut(s) 1085, 1255, 1424
ApoI RAATTY 2 cut(s) 874, 1182
AsiGI ACCGGT 2 cut(s) 347, 1054
AspS9I GGNCC 3 cut(s) 74, 408, 1052
AsuHPI GGTGA 5 cut(s) 166, 334, 949, 1075, 1198
AvaI CYCGRG 1 cut(s) 207
AvaII GGWCC 2 cut(s) 408, 1052
BaeGI GKGCMC 1 cut(s) 710
BalI TGGCCA 1 cut(s) 1076
BbsI GAAGAC 1 cut(s) 766
Bbv12I GWGCWC 1 cut(s) 710
BbvI GCAGC 3 cut(s) 1072, 1242, 1436
BccI CCATC 3 cut(s) 179, 815, 1066
BceAI ACGGC 4 cut(s) 958, 968, 1243, 1439
BciT130I CCWGG 2 cut(s) 71, 188
BciVI GTATCC 3 cut(s) 85, 368, 1141
BcoDI GTCTC 1 cut(s) 510
BfaI CTAG 2 cut(s) 252, 434
BfmI CTRYAG 1 cut(s) 903
BfuI GTATCC 3 cut(s) 85, 368, 1141
BisI GCNGC 4 cut(s) 1086, 1219, 1256, 1425
BlsI GCNGC 4 cut(s) 1087, 1220, 1257, 1426
Bme1390I CCNGG 2 cut(s) 71, 188
Bme18I GGWCC 2 cut(s) 408, 1052
BmeT110I CYCGRG 1 cut(s) 207
BmgT120I GGNCC 3 cut(s) 74, 408, 1052
BmiI GGNNCC 5 cut(s) 46, 75, 138, 185, 1291
BmrFI CCNGG 2 cut(s) 71, 188
BmsI GCATC 1 cut(s) 1170
BpiI GAAGAC 1 cut(s) 766
BpuEI CTTGAG 2 cut(s) 614, 1462
BsaAI YACGTR 1 cut(s) 1477
BsaBI GATNNNNATC 1 cut(s) 170
BsaI GGTCTC 1 cut(s) 510
BsaJI CCNNGG 2 cut(s) 70, 1264
BsaWI WCCGGW 3 cut(s) 245, 347, 1054
Bsc4I CCNNNNNNNGG 4 cut(s) 70, 71, 252, 1265
Bse118I RCCGGY 4 cut(s) 347, 410, 962, 1054
Bse1I ACTGG 3 cut(s) 231, 604, 917
Bse3DI GCAATG 2 cut(s) 468, 1104
Bse8I GATNNNNATC 1 cut(s) 170
BseBI CCWGG 2 cut(s) 71, 188
BseDI CCNNGG 2 cut(s) 70, 1264
BseGI GGATG 3 cut(s) 202, 661, 889
BseJI GATNNNNATC 1 cut(s) 170
BseLI CCNNNNNNNGG 4 cut(s) 70, 71, 252, 1265
BseMI GCAATG 2 cut(s) 468, 1104
BseMII CTCAG 2 cut(s) 393, 737
BseNI ACTGG 3 cut(s) 231, 604, 917
BseRI GAGGAG 3 cut(s) 140, 143, 161
BseSI GKGCMC 1 cut(s) 710
BseXI GCAGC 3 cut(s) 1072, 1242, 1436
BseYI CCCAGC 1 cut(s) 757
BsgI GTGCAG 1 cut(s) 1353
BshFI GGCC 4 cut(s) 76, 1076, 1410, 1439
BshTI ACCGGT 2 cut(s) 347, 1054
BsiHKAI GWGCWC 1 cut(s) 710
BsiHKCI CYCGRG 1 cut(s) 207
BsiSI CCGG 6 cut(s) 246, 348, 411, 696, 963, 1055
BsiWI CGTACG 1 cut(s) 852
BslI CCNNNNNNNGG 4 cut(s) 70, 71, 252, 1265
BsmAI GTCTC 1 cut(s) 510
BsnI GGCC 4 cut(s) 76, 1076, 1410, 1439
Bso31I GGTCTC 1 cut(s) 510
BsoBI CYCGRG 1 cut(s) 207
Bsp1286I GDGCHC 1 cut(s) 710
Bsp143I GATC 3 cut(s) 420, 829, 1486
BspANI GGCC 4 cut(s) 76, 1076, 1410, 1439
BspCNI CTCAG 2 cut(s) 392, 738
BspHI TCATGA 5 cut(s) 262, 390, 481, 588, 1275
BspLI GGNNCC 5 cut(s) 46, 75, 138, 185, 1291
BspPI GGATC 1 cut(s) 837
BspQI GCTCTTC 1 cut(s) 153
BspTNI GGTCTC 1 cut(s) 510
BsrBI CCGCTC 1 cut(s) 296
BsrDI GCAATG 2 cut(s) 468, 1104
BsrFI RCCGGY 4 cut(s) 347, 410, 962, 1054
BsrI ACTGG 3 cut(s) 231, 604, 917
BssAI RCCGGY 4 cut(s) 347, 410, 962, 1054
BssECI CCNNGG 2 cut(s) 70, 1264
BssMI GATC 3 cut(s) 420, 829, 1486
BssNAI GTATAC 1 cut(s) 728
Bst1107I GTATAC 1 cut(s) 728
Bst2UI CCWGG 2 cut(s) 71, 188
Bst4CI ACNGT 6 cut(s) 359, 712, 772, 907, 1102, 1210
Bst6I CTCTTC 2 cut(s) 153, 590
BstBAI YACGTR 1 cut(s) 1477
BstC8I GCNNGC 3 cut(s) 99, 141, 1382
BstDEI CTNAG 2 cut(s) 379, 746
BstF5I GGATG 3 cut(s) 202, 661, 889
BstKTI GATC 3 cut(s) 423, 832, 1489
BstMAI GTCTC 1 cut(s) 510
BstMBI GATC 3 cut(s) 420, 829, 1486
BstMWI GCNNNNNNNGC 8 cut(s) 140, 470, 623, 632, 705, 1082, 1407, 1424
BstNI CCWGG 2 cut(s) 71, 188
BstNSI RCATGY 1 cut(s) 1336
BstSCI CCNGG 2 cut(s) 69, 186
BstSFI CTRYAG 1 cut(s) 903
BstSLI GKGCMC 1 cut(s) 710
BstV1I GCAGC 3 cut(s) 1072, 1242, 1436
BstV2I GAAGAC 1 cut(s) 766
BstZ17I GTATAC 1 cut(s) 728
BsuI GTATCC 3 cut(s) 85, 368, 1141
BsuRI GGCC 4 cut(s) 76, 1076, 1410, 1439
BtgZI GCGATG 1 cut(s) 1085
BtsCI GGATG 3 cut(s) 202, 661, 889
BtsI GCAGTG 1 cut(s) 438
BtsIMutI CAGTG 7 cut(s) 238, 364, 438, 597, 708, 912, 924
Cac8I GCNNGC 3 cut(s) 99, 141, 1382
CaiI CAGNNNCTG 1 cut(s) 107
CciI TCATGA 5 cut(s) 262, 390, 481, 588, 1275
Cfr10I RCCGGY 4 cut(s) 347, 410, 962, 1054
Cfr13I GGNCC 3 cut(s) 74, 408, 1052
CpoI CGGWCCG 1 cut(s) 1052
Csp6I GTAC 4 cut(s) 276, 853, 946, 1135
CspAI ACCGGT 2 cut(s) 347, 1054
CspI CGGWCCG 1 cut(s) 1052
CviQI GTAC 4 cut(s) 276, 853, 946, 1135
DdeI CTNAG 2 cut(s) 379, 746
DpnI GATC 3 cut(s) 422, 831, 1488
DpnII GATC 3 cut(s) 420, 829, 1486
DraIII CACNNNGTG 1 cut(s) 180
EaeI YGGCCR 1 cut(s) 1074
Eam1104I CTCTTC 2 cut(s) 153, 590
EarI CTCTTC 2 cut(s) 153, 590
EciI GGCGGA 1 cut(s) 149
Eco31I GGTCTC 1 cut(s) 510
Eco32I GATATC 1 cut(s) 112
Eco47I GGWCC 2 cut(s) 408, 1052
Eco57I CTGAAG 1 cut(s) 760
Eco88I CYCGRG 1 cut(s) 207
EcoO109I RGGNCCY 1 cut(s) 74
EcoRII CCWGG 2 cut(s) 69, 186
EcoRV GATATC 1 cut(s) 112
FauI CCCGC 2 cut(s) 29, 184
FauNDI CATATG 1 cut(s) 1009
FblI GTMKAC 3 cut(s) 215, 727, 1458
Fnu4HI GCNGC 4 cut(s) 1086, 1219, 1256, 1425
FokI GGATG 3 cut(s) 189, 668, 896
Fsp4HI GCNGC 4 cut(s) 1086, 1219, 1256, 1425
FspBI CTAG 2 cut(s) 252, 434
GluI GCNGC 4 cut(s) 1086, 1219, 1256, 1425
GsaI CCCAGC 1 cut(s) 761
HaeIII GGCC 4 cut(s) 76, 1076, 1410, 1439
HapII CCGG 6 cut(s) 246, 348, 411, 696, 963, 1055
HincII GTYRAC 3 cut(s) 216, 925, 1048
HindII GTYRAC 3 cut(s) 216, 925, 1048
HindIII AAGCTT 2 cut(s) 476, 546
HinfI GANTC 7 cut(s) 212, 224, 314, 333, 394, 1203, 1460
HpaII CCGG 6 cut(s) 246, 348, 411, 696, 963, 1055
HphI GGTGA 5 cut(s) 166, 334, 949, 1075, 1198
Hpy166II GTNNAC 7 cut(s) 216, 708, 728, 925, 957, 1048, 1459
Hpy188I TCNGA 9 cut(s) 8, 118, 303, 509, 558, 747, 1188, 1202, 1268
Hpy188III TCNNGA 9 cut(s) 209, 263, 381, 391, 482, 589, 881, 1145, 1276
Hpy8I GTNNAC 7 cut(s) 216, 708, 728, 925, 957, 1048, 1459
HpyAV CCTTC 4 cut(s) 250, 1060, 1099, 1345
HpyCH4III ACNGT 6 cut(s) 359, 712, 772, 907, 1102, 1210
HpyCH4IV ACGT 3 cut(s) 839, 1044, 1476
HpyF10VI GCNNNNNNNGC 8 cut(s) 140, 470, 623, 632, 705, 1082, 1407, 1424
HpyF3I CTNAG 2 cut(s) 379, 746
HpySE526I ACGT 3 cut(s) 839, 1044, 1476
Kzo9I GATC 3 cut(s) 420, 829, 1486
LguI GCTCTTC 1 cut(s) 153
LmnI GCTCC 3 cut(s) 136, 189, 1289
Lsp1109I GCAGC 3 cut(s) 1072, 1242, 1436
LweI GCATC 1 cut(s) 1170
MaeI CTAG 2 cut(s) 252, 434
MaeII ACGT 3 cut(s) 839, 1044, 1476
MaeIII GTNAC 3 cut(s) 13, 103, 810
MalI GATC 3 cut(s) 422, 831, 1488
MbiI CCGCTC 1 cut(s) 296
MboI GATC 3 cut(s) 420, 829, 1486
MboII GAAGA 6 cut(s) 170, 281, 577, 766, 839, 1396
MhlI GDGCHC 1 cut(s) 710
MlsI TGGCCA 1 cut(s) 1076
MluCI AATT 4 cut(s) 429, 874, 1078, 1182
MluNI TGGCCA 1 cut(s) 1076
MlyI GAGTC 2 cut(s) 221, 1454
MmeI TCCRAC 1 cut(s) 386
Mox20I TGGCCA 1 cut(s) 1076
MscI TGGCCA 1 cut(s) 1076
MseI TTAA 4 cut(s) 428, 594, 816, 1233
MslI CAYNNNNRTG 2 cut(s) 486, 1375
Msp20I TGGCCA 1 cut(s) 1076
MspA1I CMGCKG 2 cut(s) 143, 1177
MspI CCGG 6 cut(s) 246, 348, 411, 696, 963, 1055
MspR9I CCNGG 2 cut(s) 71, 188
MvaI CCWGG 2 cut(s) 71, 188
MwoI GCNNNNNNNGC 8 cut(s) 140, 470, 623, 632, 705, 1082, 1407, 1424
NdeI CATATG 1 cut(s) 1009
NdeII GATC 3 cut(s) 420, 829, 1486
NlaIV GGNNCC 5 cut(s) 46, 75, 138, 185, 1291
NmuCI GTSAC 2 cut(s) 13, 810
NspI RCATGY 1 cut(s) 1336
OliI CACNNNNGTG 1 cut(s) 1375
PaeR7I CTCGAG 1 cut(s) 207
PagI TCATGA 5 cut(s) 262, 390, 481, 588, 1275
PciI ACATGT 1 cut(s) 1332
PciSI GCTCTTC 1 cut(s) 153
PfeI GAWTC 5 cut(s) 224, 314, 333, 394, 1203
Pfl23II CGTACG 1 cut(s) 852
PinAI ACCGGT 2 cut(s) 347, 1054
PkrI GCNGC 4 cut(s) 1087, 1220, 1257, 1426
PleI GAGTC 2 cut(s) 220, 1454
PpsI GAGTC 2 cut(s) 220, 1454
Ppu21I YACGTR 1 cut(s) 1477
PscI ACATGT 1 cut(s) 1332
Psp6I CCWGG 2 cut(s) 69, 186
PspFI CCCAGC 1 cut(s) 757
PspGI CCWGG 2 cut(s) 69, 186
PspLI CGTACG 1 cut(s) 852
PspN4I GGNNCC 5 cut(s) 46, 75, 138, 185, 1291
PspPI GGNCC 3 cut(s) 74, 408, 1052
PsrI GAACNNNNNNTAC 2 cut(s) 938, 970
PstNI CAGNNNCTG 1 cut(s) 107
RsaI GTAC 4 cut(s) 277, 854, 947, 1136
RsaNI GTAC 4 cut(s) 276, 853, 946, 1135
RseI CAYNNNNRTG 2 cut(s) 486, 1375
Rsr2I CGGWCCG 1 cut(s) 1052
RsrII CGGWCCG 1 cut(s) 1052
SalI GTCGAC 1 cut(s) 214
SapI GCTCTTC 1 cut(s) 153
SaqAI TTAA 4 cut(s) 428, 594, 816, 1233
SatI GCNGC 4 cut(s) 1086, 1219, 1256, 1425
Sau3AI GATC 3 cut(s) 420, 829, 1486
Sau96I GGNCC 3 cut(s) 74, 408, 1052
SchI GAGTC 2 cut(s) 221, 1454
ScrFI CCNGG 2 cut(s) 71, 188
SduI GDGCHC 1 cut(s) 710
SfaNI GCATC 1 cut(s) 1170
SfcI CTRYAG 1 cut(s) 903
Sfr274I CTCGAG 1 cut(s) 207
SgrAI CRCCGGYG 1 cut(s) 962
SinI GGWCC 2 cut(s) 408, 1052
SlaI CTCGAG 1 cut(s) 207
SmiMI CAYNNNNRTG 2 cut(s) 486, 1375
SmlI CTYRAG 3 cut(s) 207, 629, 1441
SmoI CTYRAG 3 cut(s) 207, 629, 1441
Sse9I AATT 4 cut(s) 429, 874, 1078, 1182
SspMI CTAG 2 cut(s) 252, 434
StyD4I CCNGG 2 cut(s) 69, 186
TaaI ACNGT 6 cut(s) 359, 712, 772, 907, 1102, 1210
TaiI ACGT 3 cut(s) 842, 1047, 1479
TaqI TCGA 3 cut(s) 208, 215, 1213
TasI AATT 4 cut(s) 429, 874, 1078, 1182
TatI WGTACW 1 cut(s) 945
TauI GCSGC 1 cut(s) 1221
TfiI GAWTC 5 cut(s) 224, 314, 333, 394, 1203
Tru1I TTAA 4 cut(s) 428, 594, 816, 1233
Tru9I TTAA 4 cut(s) 428, 594, 816, 1233
TscAI CASTG 7 cut(s) 238, 364, 445, 604, 715, 912, 924
TseFI GTSAC 2 cut(s) 13, 810
TseI GCWGC 3 cut(s) 1085, 1255, 1424
Tsp45I GTSAC 2 cut(s) 13, 810
TspDTI ATGAA 8 cut(s) 251, 282, 306, 470, 577, 683, 950, 1264
TspGWI ACGGA 2 cut(s) 840, 1065
TspRI CASTG 7 cut(s) 238, 364, 445, 604, 715, 912, 924
VneI GTGCAC 1 cut(s) 706
VpaK11BI GGWCC 2 cut(s) 408, 1052
XapI RAATTY 2 cut(s) 874, 1182
XceI RCATGY 1 cut(s) 1336
XhoI CTCGAG 1 cut(s) 207
XmiI GTMKAC 3 cut(s) 215, 727, 1458
XspI CTAG 2 cut(s) 252, 434
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.