pycom07g19520

Proline transporter

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
21865198 .. 21867930
2733 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g19520.7

Sequence Viewer

Length: 1494 bp
ATGGGGACAAACCAGAATGACTGCGCACTGGGAGAGGAAGTGAAGGGTAGGGGTACGCTGGCTGTTACTTGCATCTCGGAAGCAGAGGAGGAGGCGGAGGCAGGGGAAGGGGAAGAGATAACCACAACCGAGTGGCTCCTGGCGGGGCAAGGACATCATAGAGATTCGACTATGGATGCTACCAGTGAAGCTTATTCTGGTTCTAAGAAGGTTTTTGATGAAGAAAGTACCGAAATCCCAGAAACCGCTCATCAGATTAGCACAGATTCATGGTTTCAAGTGGGATTCGTCCTCACCACCGGTATCAACAGTGCGTATGTGCTGGGATACTCCGGAAATGTCATGATTCCTCTTGGTTGGATCGGCAGTGTAATCGGTTTAATTATAGCCACTGTAATGTCACTCTCTGCAAATGCTCTCATTGCCAAGCTCCATGAGTATGGAGGGGTTAGGCACATCAGATACAGAGACCTTGCTGGATTTATATACGGCAAGAAAGCTTACTCTCTGACATGGGGATTGCAATATGTCAATCTTTTCATGATTAACACTGGATATATCATTTTGGCCGGTCAGGCACTCAAGGCTGCGTATGTTCTGTTTAGGGATGACCATACCATGAAGCTACCACATTTTATTGCCATTTCCGGCTTTGTGTGCGCCATATTCGCGATAGGGATACCGCACTTGTCAGCTCTGAGGATTTGGCTGGGGTTTTCAACTGTCTTCAGCTTGATATATATTGTTATAGCATTCGTCCTGTCACTTAAAGACGGACTTCAAGCACCGGCCAGGAGTTATGACATCCCAGGGACACCAATAAGCAGAATATTTACTACAATTGGAGCGGCTGCTAGCCTTGTTTTTGCGTTCAACACGGGAATGCTACCAGAGATACAGGCTACAGTGAGGAAGCCAGTGGTTGACAACATGATGAAAGCTCTGTACTTTCAGTTCACTGCCGGTGTTGTGCCGTTGTATGCCGTCTGTTTTATAGGGTATTGGGCATATGGAAATAACACATCGTCTTATCTGCTCAACAACGTCAACGGACCGGTCTGGGTGAAGGCGATGGCCAATGTTGCTGCCTTCCTGCAAACAGTCATTGCTCTGCATATATTTGCAAGTCCAATGTATGAATATCTGGATACAAAGTTTGGCATCAAAGGAAGTCCATTGAAAATTCAGAACTTGACATTCAGAATCACCGTTCGAGGCGGCTACCTAGCGATTAACACGCTGCTTTCGGCTCTGCTGCCGTTCCTCGGAGATTTCATGAGCCTCACAGGAGCCATCAGCACATTCCCCCTCACATTTATCCTTGCAAACCACATGTATTTGGTGGCAAAGAAGGAGACGCTGACTTCTGCACAGAAGTGCTGGCATTGGCTGAATGTTGGCTTCTTTGCCCTTATGGCTGTCGCAGCTTTCGTTTCGTCCTTGAGGCTCATAGCCGTAGATTCCAAAACTTACCATGTATTTGCTGATCTATGA

Protein Analysis

498

Amino Acids

54.32

Weight (kDa)

6.46

Isoelectric Point (pI)

25.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 25
AccBSI CCGCTC 2 cut(s) 248, 848
AccII CGCG 1 cut(s) 671
AccIII TCCGGA 1 cut(s) 332
AciI CCGC 6 cut(s) 95, 143, 246, 683, 848, 1218
AclWI GGATC 1 cut(s) 368
AcoI YGGCCR 3 cut(s) 567, 789, 1074
AcsI RAATTY 1 cut(s) 1182
AcuI CTGAAG 1 cut(s) 712
AfaI GTAC 3 cut(s) 55, 229, 947
AfiI CCNNNNNNNGG 1 cut(s) 1265
AflIII ACRYGT 1 cut(s) 1332
AgeI ACCGGT 2 cut(s) 299, 1054
AgsI TTSAA 5 cut(s) 278, 720, 782, 874, 1180
AjnI CCWGG 3 cut(s) 138, 791, 808
AleI CACNNNNGTG 1 cut(s) 1375
AluBI AGCT 8 cut(s) 191, 430, 500, 625, 695, 732, 941, 1427
AluI AGCT 8 cut(s) 191, 430, 500, 625, 695, 732, 941, 1427
Alw26I GTCTC 2 cut(s) 462, 1349
AlwI GGATC 1 cut(s) 368
Aor13HI TCCGGA 1 cut(s) 332
AoxI GGCC 3 cut(s) 567, 789, 1074
ApeKI GCWGC 6 cut(s) 587, 851, 1085, 1240, 1255, 1424
ApoI RAATTY 1 cut(s) 1182
AsiGI ACCGGT 2 cut(s) 299, 1054
AspLEI GCGC 2 cut(s) 26, 662
AspS9I GGNCC 1 cut(s) 1052
AsuHPI GGTGA 3 cut(s) 286, 1075, 1198
AsuNHI GCTAGC 1 cut(s) 854
AvaII GGWCC 1 cut(s) 1052
BalI TGGCCA 1 cut(s) 1076
BbsI GAAGAC 1 cut(s) 718
BbvI GCAGC 6 cut(s) 574, 838, 1072, 1227, 1242, 1436
BccI CCATC 2 cut(s) 1066, 1301
BceAI ACGGC 5 cut(s) 505, 958, 968, 1243, 1439
BcgI CGANNNNNNTGC 2 cut(s) 355, 389
BciT130I CCWGG 3 cut(s) 140, 793, 810
BciVI GTATCC 3 cut(s) 320, 672, 1141
BcoDI GTCTC 2 cut(s) 462, 1349
BfaI CTAG 2 cut(s) 855, 1226
BfmI CTRYAG 1 cut(s) 903
BfuI GTATCC 3 cut(s) 320, 672, 1141
BglI GCCNNNNNGGC 2 cut(s) 575, 1415
BisI GCNGC 8 cut(s) 588, 849, 852, 1086, 1219, 1241, 1256, 1425
BlsI GCNGC 8 cut(s) 589, 850, 853, 1087, 1220, 1242, 1257, 1426
Bme1390I CCNGG 3 cut(s) 140, 793, 810
Bme18I GGWCC 1 cut(s) 1052
BmgT120I GGNCC 1 cut(s) 1052
BmiI GGNNCC 2 cut(s) 137, 1291
BmrFI CCNGG 3 cut(s) 140, 793, 810
BmrI ACTGGG 1 cut(s) 38
BmsI GCATC 3 cut(s) 81, 166, 1170
BmtI GCTAGC 1 cut(s) 858
BmuI ACTGGG 1 cut(s) 38
BpiI GAAGAC 1 cut(s) 718
BpuEI CTTGAG 2 cut(s) 566, 1462
BsaI GGTCTC 1 cut(s) 462
BsaJI CCNNGG 3 cut(s) 808, 809, 1264
BsaWI WCCGGW 3 cut(s) 299, 332, 1054
BsaXI ACNNNNNCTCC 2 cut(s) 24, 54
Bsc4I CCNNNNNNNGG 1 cut(s) 1265
Bse118I RCCGGY 5 cut(s) 299, 569, 787, 962, 1054
Bse1I ACTGG 4 cut(s) 33, 183, 556, 917
Bse3DI GCAATG 2 cut(s) 420, 1104
BseAI TCCGGA 1 cut(s) 332
BseBI CCWGG 3 cut(s) 140, 793, 810
BseDI CCNNGG 3 cut(s) 808, 809, 1264
BseGI GGATG 3 cut(s) 181, 613, 804
BseLI CCNNNNNNNGG 1 cut(s) 1265
BseMI GCAATG 2 cut(s) 420, 1104
BseMII CTCAG 1 cut(s) 689
BseNI ACTGG 4 cut(s) 33, 183, 556, 917
BseRI GAGGAG 2 cut(s) 101, 104
BseXI GCAGC 6 cut(s) 574, 838, 1072, 1227, 1242, 1436
BseYI CCCAGC 2 cut(s) 322, 709
BsgI GTGCAG 1 cut(s) 1353
Bsh1236I CGCG 1 cut(s) 671
BshFI GGCC 3 cut(s) 569, 791, 1076
BshTI ACCGGT 2 cut(s) 299, 1054
BsiSI CCGG 7 cut(s) 300, 333, 570, 648, 788, 963, 1055
BslFI GGGAC 2 cut(s) 19, 826
BslI CCNNNNNNNGG 1 cut(s) 1265
BsmAI GTCTC 2 cut(s) 462, 1349
BsmBI CGTCTC 1 cut(s) 1349
BsmFI GGGAC 2 cut(s) 19, 826
BsmI GAATGC 2 cut(s) 752, 888
BsnI GGCC 3 cut(s) 569, 791, 1076
Bso31I GGTCTC 1 cut(s) 462
Bsp13I TCCGGA 1 cut(s) 332
Bsp143I GATC 2 cut(s) 360, 1486
Bsp68I TCGCGA 1 cut(s) 671
BspACI CCGC 6 cut(s) 95, 143, 246, 683, 848, 1218
BspANI GGCC 3 cut(s) 569, 791, 1076
BspCNI CTCAG 1 cut(s) 690
BspEI TCCGGA 1 cut(s) 332
BspFNI CGCG 1 cut(s) 671
BspHI TCATGA 3 cut(s) 342, 540, 1275
BspLI GGNNCC 2 cut(s) 137, 1291
BspOI GCTAGC 1 cut(s) 858
BspPI GGATC 1 cut(s) 368
BspTNI GGTCTC 1 cut(s) 462
BsrBI CCGCTC 2 cut(s) 248, 848
BsrDI GCAATG 2 cut(s) 420, 1104
BsrFI RCCGGY 5 cut(s) 299, 569, 787, 962, 1054
BsrI ACTGG 4 cut(s) 33, 183, 556, 917
BssAI RCCGGY 5 cut(s) 299, 569, 787, 962, 1054
BssECI CCNNGG 3 cut(s) 808, 809, 1264
BssMI GATC 2 cut(s) 360, 1486
Bst2UI CCWGG 3 cut(s) 140, 793, 810
Bst4CI ACNGT 6 cut(s) 311, 394, 724, 907, 1102, 1210
Bst6I CTCTTC 1 cut(s) 108
BstC8I GCNNGC 3 cut(s) 60, 856, 1382
BstDEI CTNAG 2 cut(s) 204, 698
BstF5I GGATG 3 cut(s) 181, 613, 804
BstFNI CGCG 1 cut(s) 671
BstHHI GCGC 2 cut(s) 26, 662
BstKTI GATC 2 cut(s) 363, 1489
BstMAI GTCTC 2 cut(s) 462, 1349
BstMBI GATC 2 cut(s) 360, 1486
BstMWI GCNNNNNNNGC 8 cut(s) 422, 575, 584, 657, 668, 1082, 1415, 1424
BstNI CCWGG 3 cut(s) 140, 793, 810
BstNSI RCATGY 1 cut(s) 1336
BstSCI CCNGG 3 cut(s) 138, 791, 808
BstSFI CTRYAG 1 cut(s) 903
BstUI CGCG 1 cut(s) 671
BstV1I GCAGC 6 cut(s) 574, 838, 1072, 1227, 1242, 1436
BstV2I GAAGAC 1 cut(s) 718
BstXI CCANNNNNNTGG 1 cut(s) 440
BsuI GTATCC 3 cut(s) 320, 672, 1141
BsuRI GGCC 3 cut(s) 569, 791, 1076
BtgZI GCGATG 1 cut(s) 1085
BtsCI GGATG 3 cut(s) 181, 613, 804
BtsI GCAGTG 2 cut(s) 373, 957
BtsIMutI CAGTG 9 cut(s) 26, 190, 316, 373, 390, 549, 912, 924, 957
BtuMI TCGCGA 1 cut(s) 671
Cac8I GCNNGC 3 cut(s) 60, 856, 1382
CciI TCATGA 3 cut(s) 342, 540, 1275
CfoI GCGC 2 cut(s) 26, 662
Cfr10I RCCGGY 5 cut(s) 299, 569, 787, 962, 1054
Cfr13I GGNCC 1 cut(s) 1052
CpoI CGGWCCG 1 cut(s) 1052
CseI GACGC 1 cut(s) 1366
Csp6I GTAC 3 cut(s) 54, 228, 946
CspAI ACCGGT 2 cut(s) 299, 1054
CspI CGGWCCG 1 cut(s) 1052
CviQI GTAC 3 cut(s) 54, 228, 946
DdeI CTNAG 2 cut(s) 204, 698
DpnI GATC 2 cut(s) 362, 1488
DpnII GATC 2 cut(s) 360, 1486
EaeI YGGCCR 3 cut(s) 567, 789, 1074
Eam1104I CTCTTC 1 cut(s) 108
EarI CTCTTC 1 cut(s) 108
EciI GGCGGA 1 cut(s) 110
Eco31I GGTCTC 1 cut(s) 462
Eco47I GGWCC 1 cut(s) 1052
Eco57I CTGAAG 1 cut(s) 712
EcoRII CCWGG 3 cut(s) 138, 791, 808
Esp3I CGTCTC 1 cut(s) 1349
FalI AAGNNNNNCTT 2 cut(s) 762, 794
FaqI GGGAC 2 cut(s) 19, 826
FauI CCCGC 1 cut(s) 136
FauNDI CATATG 1 cut(s) 1009
Fnu4HI GCNGC 8 cut(s) 588, 849, 852, 1086, 1219, 1241, 1256, 1425
FokI GGATG 3 cut(s) 188, 620, 791
Fsp4HI GCNGC 8 cut(s) 588, 849, 852, 1086, 1219, 1241, 1256, 1425
FspBI CTAG 2 cut(s) 855, 1226
FspI TGCGCA 1 cut(s) 25
GlaI GCGC 2 cut(s) 25, 661
GluI GCNGC 8 cut(s) 588, 849, 852, 1086, 1219, 1241, 1256, 1425
GsaI CCCAGC 2 cut(s) 326, 713
HaeIII GGCC 3 cut(s) 569, 791, 1076
HapII CCGG 7 cut(s) 300, 333, 570, 648, 788, 963, 1055
HgaI GACGC 1 cut(s) 1366
HhaI GCGC 2 cut(s) 26, 662
Hin6I GCGC 2 cut(s) 24, 660
HinP1I GCGC 2 cut(s) 24, 660
HincII GTYRAC 2 cut(s) 925, 1048
HindII GTYRAC 2 cut(s) 925, 1048
HindIII AAGCTT 2 cut(s) 189, 498
HinfI GANTC 6 cut(s) 164, 266, 285, 346, 1203, 1460
HpaII CCGG 7 cut(s) 300, 333, 570, 648, 788, 963, 1055
HphI GGTGA 3 cut(s) 286, 1075, 1198
Hpy166II GTNNAC 3 cut(s) 925, 957, 1048
Hpy188I TCNGA 8 cut(s) 79, 255, 461, 510, 699, 1188, 1202, 1268
Hpy188III TCNNGA 6 cut(s) 333, 343, 541, 670, 1145, 1276
Hpy8I GTNNAC 3 cut(s) 925, 957, 1048
HpyAV CCTTC 6 cut(s) 37, 101, 202, 1060, 1099, 1345
HpyCH4III ACNGT 6 cut(s) 311, 394, 724, 907, 1102, 1210
HpyCH4IV ACGT 1 cut(s) 1044
HpyCH4V TGCA 8 cut(s) 72, 410, 523, 1096, 1114, 1124, 1325, 1370
HpyF10VI GCNNNNNNNGC 8 cut(s) 422, 575, 584, 657, 668, 1082, 1415, 1424
HpyF3I CTNAG 2 cut(s) 204, 698
HpySE526I ACGT 1 cut(s) 1044
HspAI GCGC 2 cut(s) 24, 660
Kpn2I TCCGGA 1 cut(s) 332
Kzo9I GATC 2 cut(s) 360, 1486
LmnI GCTCC 4 cut(s) 141, 435, 845, 1289
Lsp1109I GCAGC 6 cut(s) 574, 838, 1072, 1227, 1242, 1436
LweI GCATC 3 cut(s) 81, 166, 1170
MaeI CTAG 2 cut(s) 855, 1226
MaeII ACGT 1 cut(s) 1044
MaeIII GTNAC 3 cut(s) 64, 399, 762
MalI GATC 2 cut(s) 362, 1488
MbiI CCGCTC 2 cut(s) 248, 848
MboI GATC 2 cut(s) 360, 1486
MboII GAAGA 3 cut(s) 125, 233, 718
MfeI CAATTG 1 cut(s) 840
MlsI TGGCCA 1 cut(s) 1076
MluCI AATT 3 cut(s) 381, 840, 1182
MluNI TGGCCA 1 cut(s) 1076
MmeI TCCRAC 1 cut(s) 338
Mox20I TGGCCA 1 cut(s) 1076
MroI TCCGGA 1 cut(s) 332
MscI TGGCCA 1 cut(s) 1076
MseI TTAA 4 cut(s) 380, 546, 768, 1233
MslI CAYNNNNRTG 4 cut(s) 395, 438, 881, 1375
Msp20I TGGCCA 1 cut(s) 1076
MspI CCGG 7 cut(s) 300, 333, 570, 648, 788, 963, 1055
MspR9I CCNGG 3 cut(s) 140, 793, 810
MunI CAATTG 1 cut(s) 840
Mva1269I GAATGC 2 cut(s) 752, 888
MvaI CCWGG 3 cut(s) 140, 793, 810
MvnI CGCG 1 cut(s) 671
MwoI GCNNNNNNNGC 8 cut(s) 422, 575, 584, 657, 668, 1082, 1415, 1424
NdeI CATATG 1 cut(s) 1009
NdeII GATC 2 cut(s) 360, 1486
NheI GCTAGC 1 cut(s) 854
NlaIV GGNNCC 2 cut(s) 137, 1291
NmuCI GTSAC 2 cut(s) 399, 762
NruI TCGCGA 1 cut(s) 671
NsbI TGCGCA 1 cut(s) 25
NspI RCATGY 1 cut(s) 1336
OliI CACNNNNGTG 1 cut(s) 1375
PagI TCATGA 3 cut(s) 342, 540, 1275
PasI CCCWGGG 1 cut(s) 809
PciI ACATGT 1 cut(s) 1332
PcsI WCGNNNNNNNCGW 1 cut(s) 1428
PctI GAATGC 2 cut(s) 752, 888
PfeI GAWTC 6 cut(s) 164, 266, 285, 346, 1203, 1460
PinAI ACCGGT 2 cut(s) 299, 1054
PkrI GCNGC 8 cut(s) 589, 850, 853, 1087, 1220, 1242, 1257, 1426
PscI ACATGT 1 cut(s) 1332
Psp6I CCWGG 3 cut(s) 138, 791, 808
PspFI CCCAGC 2 cut(s) 322, 709
PspGI CCWGG 3 cut(s) 138, 791, 808
PspN4I GGNNCC 2 cut(s) 137, 1291
PspPI GGNCC 1 cut(s) 1052
PsrI GAACNNNNNNTAC 2 cut(s) 938, 970
RruI TCGCGA 1 cut(s) 671
RsaI GTAC 3 cut(s) 55, 229, 947
RsaNI GTAC 3 cut(s) 54, 228, 946
RseI CAYNNNNRTG 4 cut(s) 395, 438, 881, 1375
Rsr2I CGGWCCG 1 cut(s) 1052
RsrII CGGWCCG 1 cut(s) 1052
SaqAI TTAA 4 cut(s) 380, 546, 768, 1233
SatI GCNGC 8 cut(s) 588, 849, 852, 1086, 1219, 1241, 1256, 1425
Sau3AI GATC 2 cut(s) 360, 1486
Sau96I GGNCC 1 cut(s) 1052
ScrFI CCNGG 3 cut(s) 140, 793, 810
SfaNI GCATC 3 cut(s) 81, 166, 1170
SfcI CTRYAG 1 cut(s) 903
SinI GGWCC 1 cut(s) 1052
SmiMI CAYNNNNRTG 4 cut(s) 395, 438, 881, 1375
SmlI CTYRAG 2 cut(s) 581, 1441
SmoI CTYRAG 2 cut(s) 581, 1441
Sse9I AATT 3 cut(s) 381, 840, 1182
SsiI CCGC 6 cut(s) 95, 143, 246, 683, 848, 1218
SspI AATATT 1 cut(s) 831
SspMI CTAG 2 cut(s) 855, 1226
StyD4I CCNGG 3 cut(s) 138, 791, 808
TaaI ACNGT 6 cut(s) 311, 394, 724, 907, 1102, 1210
TaiI ACGT 1 cut(s) 1047
TaqI TCGA 2 cut(s) 167, 1213
TasI AATT 3 cut(s) 381, 840, 1182
TatI WGTACW 1 cut(s) 945
TauI GCSGC 2 cut(s) 851, 1221
TfiI GAWTC 6 cut(s) 164, 266, 285, 346, 1203, 1460
Tru1I TTAA 4 cut(s) 380, 546, 768, 1233
Tru9I TTAA 4 cut(s) 380, 546, 768, 1233
TscAI CASTG 9 cut(s) 33, 190, 316, 373, 397, 556, 912, 924, 964
TseFI GTSAC 2 cut(s) 399, 762
TseI GCWGC 6 cut(s) 587, 851, 1085, 1240, 1255, 1424
Tsp45I GTSAC 2 cut(s) 399, 762
TspDTI ATGAA 7 cut(s) 234, 258, 529, 635, 950, 1152, 1264
TspGWI ACGGA 2 cut(s) 789, 1065
TspRI CASTG 9 cut(s) 33, 190, 316, 373, 397, 556, 912, 924, 964
VpaK11BI GGWCC 1 cut(s) 1052
XapI RAATTY 1 cut(s) 1182
XceI RCATGY 1 cut(s) 1336
XspI CTAG 2 cut(s) 855, 1226
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.