Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0014975

Physical Location & Seq

Genomic Coordinates Reverse (-)

15587394 .. 15589369

Gene Structure 1976 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G37090.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1056 bp

ATGGGATCTCTAGAGAGATCAAAGAAGAAAGCTCAAGTATGGAAGAAAGCTGTGATCCATTTCTCTCTATGTTTTGTAATGGGTTTCTTCACTGGCTTCGCTCCTGCTGGTAAGGCCTCATTTTTCTCTAATTTCGAAACGACTTCTTATACTTCTACAAAATCTCCGATTCCTCCCCAACCTTTTGAAAACGCTACATACACACAACATTCCCTCCTCAATAGAACCTTGATCAATTCCCAAAGCCAAGCTCCAGCTCCCGCAGAGTCGCGAGAAGCTGAAGGAGAAACAAGATCTCTCTCCGAGAAAGAAGATGAGAATCAAGTAAAAGTGACACCAAGAGGACTAGTGATTGTTGTAACTCCAATAATAACTAAAGATCGCTACAAAAACGTTCTTCTTAGGAGAATGGCCAATACCTTGAGGCTAGTTCCACCTCCCTTATTGTGGATAGTCGTGGAAAAACACTCGGATGGCGAAGAAAAATCTTCGTCTACAATGTTAAGAAAGACCGGTATCATGTATAGACGTATAGTCTTCAAGGAAGATTTCACAAGCTTAGAATCAGAGCTTGATCATCAAAGGAATCTAGCTTTGAGGCACATTGAACATCACAAATTAAGCGGAATAGTTCATTTTGCGGGACTAAACAACATATATGATCTTGATTTTTTCGTCAAGATCAGAGATATCGAGGTATTTGGTACTTGGCCAATGGCATTGTTATCGGCTAATAGGAAACGAGTGGTAGTAGAAGGGCCTGTTTGTGAATCTTCACAAGTATTGGGGTGGCATTTGAGAAAAATTAATAACGAGACAGAGACAAAGCCTCCGATTCATATATCAAGCTTCGCTTTCAATAGTTCCATACTTTGGGACCCTGAGAGATGGGGTCGTCCTTCTTCTGTTGAAGGCACCAAACAGGATTCGATAAAATATGTGAAGCAAGTAGTTTTGGAGGACGATACAAAGTTGAAGGGACTTCCGGCACAAGATTGTTCCAAGATTATGCTTTGGCGTCTCAAATTTCCCACAAGAACACGTTTAAGCACCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000139 GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005975 GO:0005976 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009832 GO:0009834 GO:0009987 GO:0010383 GO:0010410 GO:0010413 GO:0010417 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016763 GO:0031090 GO:0031984 GO:0033692 GO:0034637 GO:0034645 GO:0042285 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044036 GO:0044038 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045491 GO:0045492 GO:0070589 GO:0070592 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0098588 GO:0098791 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_transf_43

Protein Analysis

351

Amino Acids

40.06

Weight (kDa)

9.55

Isoelectric Point (pI)

50.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_43	PF03360	137 - 342	2.9e-58	Glycosyltransferase family 43

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014975)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37090
fragaria_vesca	FvH4_6g15450
malus_domestica	MD04G1103300.v1.1 MD12G1123400.v1.1
prunus_persica	Prupe.6G239800_v2.0.a1
pyrus_communis	pycom04g09840 pycom12g12210
rosa_chinensis	RchiOBHm_Chr3g0468931
rosa_laevigata	RLG00000024399
rosa_multiflora	Rmu_sc0001639.1_g000009
rosa_roxburghii	Rroxscaffold_6G00412450
rosa_rugosa	Rorug03G0097600
rosa_samantha	Rh3AG147300 Rh3BG169900 Rh3DG205200
rosa_wichuraiana	Rw3G013860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	914
AccB7I	CCANNNNNTGG	1 cut(s)	873
AccI	GTMKAC	1 cut(s)	494
AccII	CGCG	1 cut(s)	271
AciI	CCGC	3 cut(s)	261, 624, 641
AclI	AACGTT	1 cut(s)	393
AclWI	GGATC	2 cut(s)	13, 49
AcoI	YGGCCR	2 cut(s)	411, 710
AcsI	RAATTY	1 cut(s)	1025
AcuI	CTGAAG	1 cut(s)	300
AcyI	GRCGYC	1 cut(s)	1018
AfaI	GTAC	1 cut(s)	706
AfiI	CCNNNNNNNGG	2 cut(s)	447, 873
AflIII	ACRYGT	1 cut(s)	1040
AgeI	ACCGGT	1 cut(s)	512
AgsI	TTSAA	6 cut(s)	188, 541, 608, 859, 911, 976
AhdI	GACNNNNNGTC	1 cut(s)	533
AhlI	ACTAGT	1 cut(s)	346
AluBI	AGCT	9 cut(s)	32, 50, 251, 257, 278, 558, 571, 593, 849
AluI	AGCT	9 cut(s)	32, 50, 251, 257, 278, 558, 571, 593, 849
Alw26I	GTCTC	3 cut(s)	809, 815, 1025
AlwI	GGATC	2 cut(s)	13, 49
AoxI	GGCC	4 cut(s)	114, 411, 710, 758
ApoI	RAATTY	1 cut(s)	1025
AseI	ATTAAT	1 cut(s)	807
AsiGI	ACCGGT	1 cut(s)	512
AspS9I	GGNCC	2 cut(s)	758, 877
AsuII	TTCGAA	1 cut(s)	135
AvaII	GGWCC	1 cut(s)	877
BalI	TGGCCA	2 cut(s)	413, 712
BanI	GGYRCC	1 cut(s)	914
BbsI	GAAGAC	1 cut(s)	529
BccI	CCATC	2 cut(s)	467, 882
BcgI	CGANNNNNNTGC	2 cut(s)	708, 742
BclI	TGATCA	2 cut(s)	231, 574
BcoDI	GTCTC	3 cut(s)	809, 815, 1025
BcuI	ACTAGT	1 cut(s)	346
BfaI	CTAG	4 cut(s)	11, 347, 428, 590
BglII	AGATCT	1 cut(s)	293
Bme18I	GGWCC	1 cut(s)	877
BmeRI	GACNNNNNGTC	1 cut(s)	533
BmgT120I	GGNCC	2 cut(s)	758, 877
BmiI	GGNNCC	3 cut(s)	878, 879, 916
BpiI	GAAGAC	1 cut(s)	529
BpmI	CTGGAG	1 cut(s)	237
Bpu14I	TTCGAA	1 cut(s)	135
BpuEI	CTTGAG	2 cut(s)	18, 442
BsaBI	GATNNNNATC	1 cut(s)	318
BsaHI	GRCGYC	1 cut(s)	1018
BsaWI	WCCGGW	1 cut(s)	512
BsaXI	ACNNNNNCTCC	6 cut(s)	148, 178, 198, 228, 814, 844
Bsc4I	CCNNNNNNNGG	2 cut(s)	447, 873
Bse118I	RCCGGY	1 cut(s)	512
Bse1I	ACTGG	1 cut(s)	97
Bse8I	GATNNNNATC	1 cut(s)	318
BseGI	GGATG	1 cut(s)	478
BseJI	GATNNNNATC	1 cut(s)	318
BseLI	CCNNNNNNNGG	2 cut(s)	447, 873
BseMII	CTCAG	1 cut(s)	873
BseNI	ACTGG	1 cut(s)	97
BseRI	GAGGAG	1 cut(s)	206
Bsh1236I	CGCG	1 cut(s)	271
BshFI	GGCC	4 cut(s)	116, 413, 712, 760
BshNI	GGYRCC	1 cut(s)	914
BshTI	ACCGGT	1 cut(s)	512
BsiSI	CCGG	2 cut(s)	513, 986
BslFI	GGGAC	3 cut(s)	657, 890, 993
BslI	CCNNNNNNNGG	2 cut(s)	447, 873
BsmAI	GTCTC	3 cut(s)	809, 815, 1025
BsmBI	CGTCTC	1 cut(s)	1025
BsmFI	GGGAC	3 cut(s)	657, 890, 993
BsnI	GGCC	4 cut(s)	116, 413, 712, 760
Bsp119I	TTCGAA	1 cut(s)	135
Bsp143I	GATC	9 cut(s)	5, 17, 54, 231, 293, 379, 574, 661, 681
Bsp68I	TCGCGA	1 cut(s)	271
BspACI	CCGC	3 cut(s)	261, 624, 641
BspANI	GGCC	4 cut(s)	116, 413, 712, 760
BspCNI	CTCAG	1 cut(s)	874
BspFNI	CGCG	1 cut(s)	271
BspLI	GGNNCC	3 cut(s)	878, 879, 916
BspPI	GGATC	2 cut(s)	13, 49
BspT104I	TTCGAA	1 cut(s)	135
BspT107I	GGYRCC	1 cut(s)	914
BsrFI	RCCGGY	1 cut(s)	512
BsrI	ACTGG	1 cut(s)	97
BssAI	RCCGGY	1 cut(s)	512
BssMI	GATC	9 cut(s)	5, 17, 54, 231, 293, 379, 574, 661, 681
BssNI	GRCGYC	1 cut(s)	1018
BstACI	GRCGYC	1 cut(s)	1018
BstBI	TTCGAA	1 cut(s)	135
BstDEI	CTNAG	3 cut(s)	401, 559, 882
BstF5I	GGATG	1 cut(s)	478
BstFNI	CGCG	1 cut(s)	271
BstKTI	GATC	9 cut(s)	8, 20, 57, 234, 296, 382, 577, 664, 684
BstMAI	GTCTC	3 cut(s)	809, 815, 1025
BstMBI	GATC	9 cut(s)	5, 17, 54, 231, 293, 379, 574, 661, 681
BstMWI	GCNNNNNNNGC	1 cut(s)	113
BstUI	CGCG	1 cut(s)	271
BstV2I	GAAGAC	1 cut(s)	529
BstX2I	RGATCY	2 cut(s)	5, 293
BstYI	RGATCY	2 cut(s)	5, 293
BsuRI	GGCC	4 cut(s)	116, 413, 712, 760
BtsCI	GGATG	1 cut(s)	478
BtsIMutI	CAGTG	1 cut(s)	90
BtuMI	TCGCGA	1 cut(s)	271
Cfr10I	RCCGGY	1 cut(s)	512
Cfr13I	GGNCC	2 cut(s)	758, 877
CseI	GACGC	1 cut(s)	1007
Csp6I	GTAC	1 cut(s)	705
CspAI	ACCGGT	1 cut(s)	512
CviAII	CATG	1 cut(s)	520
CviQI	GTAC	1 cut(s)	705
DdeI	CTNAG	3 cut(s)	401, 559, 882
DpnI	GATC	9 cut(s)	7, 19, 56, 233, 295, 381, 576, 663, 683
DpnII	GATC	9 cut(s)	5, 17, 54, 231, 293, 379, 574, 661, 681
DriI	GACNNNNNGTC	1 cut(s)	533
EaeI	YGGCCR	2 cut(s)	411, 710
Eam1105I	GACNNNNNGTC	1 cut(s)	533
Eco147I	AGGCCT	1 cut(s)	116
Eco32I	GATATC	1 cut(s)	691
Eco47I	GGWCC	1 cut(s)	877
Eco57I	CTGAAG	1 cut(s)	300
EcoO109I	RGGNCCY	2 cut(s)	758, 877
EcoRV	GATATC	1 cut(s)	691
Esp3I	CGTCTC	1 cut(s)	1025
FaeI	CATG	1 cut(s)	523
FalI	AAGNNNNNCTT	2 cut(s)	838, 870
FaqI	GGGAC	3 cut(s)	657, 890, 993
FatI	CATG	1 cut(s)	519
FauI	CCCGC	2 cut(s)	268, 634
FbaI	TGATCA	2 cut(s)	231, 574
FblI	GTMKAC	1 cut(s)	494
FokI	GGATG	1 cut(s)	485
FspBI	CTAG	4 cut(s)	11, 347, 428, 590
GsuI	CTGGAG	1 cut(s)	237
HaeIII	GGCC	4 cut(s)	116, 413, 712, 760
HapII	CCGG	2 cut(s)	513, 986
HgaI	GACGC	1 cut(s)	1007
Hin1I	GRCGYC	1 cut(s)	1018
Hin1II	CATG	1 cut(s)	523
HindIII	AAGCTT	2 cut(s)	556, 847
HinfI	GANTC	8 cut(s)	169, 266, 319, 563, 586, 770, 835, 926
HpaII	CCGG	2 cut(s)	513, 986
Hpy166II	GTNNAC	1 cut(s)	495
Hpy188I	TCNGA	6 cut(s)	168, 304, 472, 568, 686, 834
Hpy188III	TCNNGA	4 cut(s)	11, 270, 665, 679
Hpy8I	GTNNAC	1 cut(s)	495
HpyAV	CCTTC	5 cut(s)	275, 749, 905, 909, 970
HpyCH4IV	ACGT	3 cut(s)	393, 529, 1042
HpyF10VI	GCNNNNNNNGC	1 cut(s)	113
HpyF3I	CTNAG	3 cut(s)	401, 559, 882
HpySE526I	ACGT	3 cut(s)	393, 529, 1042
Hsp92I	GRCGYC	1 cut(s)	1018
Hsp92II	CATG	1 cut(s)	523
KflI	GGGWCCC	1 cut(s)	877
Ksp22I	TGATCA	2 cut(s)	231, 574
Kzo9I	GATC	9 cut(s)	5, 17, 54, 231, 293, 379, 574, 661, 681
LmnI	GCTCC	3 cut(s)	106, 256, 262
LpnPI	CCDG	9 cut(s)	78, 93, 117, 267, 526, 774, 894, 908, 999
MaeI	CTAG	4 cut(s)	11, 347, 428, 590
MaeII	ACGT	3 cut(s)	393, 529, 1042
MaeIII	GTNAC	2 cut(s)	331, 358
MalI	GATC	9 cut(s)	7, 19, 56, 233, 295, 381, 576, 663, 683
MboI	GATC	9 cut(s)	5, 17, 54, 231, 293, 379, 574, 661, 681
MflI	RGATCY	2 cut(s)	5, 293
MlsI	TGGCCA	2 cut(s)	413, 712
MluCI	AATT	5 cut(s)	130, 235, 617, 804, 1025
MluNI	TGGCCA	2 cut(s)	413, 712
MlyI	GAGTC	1 cut(s)	275
Mox20I	TGGCCA	2 cut(s)	413, 712
MscI	TGGCCA	2 cut(s)	413, 712
MseI	TTAA	4 cut(s)	503, 620, 807, 1046
MslI	CAYNNNNRTG	1 cut(s)	471
Msp20I	TGGCCA	2 cut(s)	413, 712
MspI	CCGG	2 cut(s)	513, 986
MvnI	CGCG	1 cut(s)	271
MwoI	GCNNNNNNNGC	1 cut(s)	113
NdeII	GATC	9 cut(s)	5, 17, 54, 231, 293, 379, 574, 661, 681
NlaIII	CATG	1 cut(s)	523
NlaIV	GGNNCC	3 cut(s)	878, 879, 916
NmuCI	GTSAC	1 cut(s)	331
NruI	TCGCGA	1 cut(s)	271
NspV	TTCGAA	1 cut(s)	135
PceI	AGGCCT	1 cut(s)	116
PfeI	GAWTC	7 cut(s)	169, 319, 563, 586, 770, 835, 926
PflMI	CCANNNNNTGG	1 cut(s)	873
PinAI	ACCGGT	1 cut(s)	512
PleI	GAGTC	1 cut(s)	274
PpsI	GAGTC	1 cut(s)	274
PpuMI	RGGWCCY	1 cut(s)	877
PshBI	ATTAAT	1 cut(s)	807
Psp1406I	AACGTT	1 cut(s)	393
Psp5II	RGGWCCY	1 cut(s)	877
PspN4I	GGNNCC	3 cut(s)	878, 879, 916
PspPI	GGNCC	2 cut(s)	758, 877
PspPPI	RGGWCCY	1 cut(s)	877
PsuI	RGATCY	2 cut(s)	5, 293
RruI	TCGCGA	1 cut(s)	271
RsaI	GTAC	1 cut(s)	706
RsaNI	GTAC	1 cut(s)	705
RseI	CAYNNNNRTG	1 cut(s)	471
SaqAI	TTAA	4 cut(s)	503, 620, 807, 1046
Sau3AI	GATC	9 cut(s)	5, 17, 54, 231, 293, 379, 574, 661, 681
Sau96I	GGNCC	2 cut(s)	758, 877
SchI	GAGTC	1 cut(s)	275
SfuI	TTCGAA	1 cut(s)	135
SinI	GGWCC	1 cut(s)	877
SmiMI	CAYNNNNRTG	1 cut(s)	471
SmlI	CTYRAG	2 cut(s)	33, 421
SmoI	CTYRAG	2 cut(s)	33, 421
SpeI	ACTAGT	1 cut(s)	346
Sse9I	AATT	5 cut(s)	130, 235, 617, 804, 1025
SseBI	AGGCCT	1 cut(s)	116
SsiI	CCGC	3 cut(s)	261, 624, 641
SspMI	CTAG	4 cut(s)	11, 347, 428, 590
StuI	AGGCCT	1 cut(s)	116
TaiI	ACGT	3 cut(s)	396, 532, 1045
TaqI	TCGA	3 cut(s)	135, 693, 929
TasI	AATT	5 cut(s)	130, 235, 617, 804, 1025
TfiI	GAWTC	7 cut(s)	169, 319, 563, 586, 770, 835, 926
Tru1I	TTAA	4 cut(s)	503, 620, 807, 1046
Tru9I	TTAA	4 cut(s)	503, 620, 807, 1046
TscAI	CASTG	1 cut(s)	97
TseFI	GTSAC	1 cut(s)	331
Tsp45I	GTSAC	1 cut(s)	331
TspDTI	ATGAA	2 cut(s)	623, 827
TspRI	CASTG	1 cut(s)	97
Van91I	CCANNNNNTGG	1 cut(s)	873
VpaK11BI	GGWCC	1 cut(s)	877
VspI	ATTAAT	1 cut(s)	807
XapI	RAATTY	1 cut(s)	1025
XbaI	TCTAGA	1 cut(s)	10
XmiI	GTMKAC	1 cut(s)	494
XspI	CTAG	4 cut(s)	11, 347, 428, 590

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.