Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G37090 |
| fragaria_vesca | FvH4_6g15450 |
| malus_domestica | MD04G1103300.v1.1 MD12G1123400.v1.1 |
| prunus_persica | Prupe.6G239800_v2.0.a1 |
| pyrus_communis | pycom04g09840 pycom12g12210 |
| rosa_chinensis | RchiOBHm_Chr3g0468931 |
| rosa_laevigata | RLG00000024399 |
| rosa_multiflora | Rmu_sc0001639.1_g000009 |
| rosa_roxburghii | Rroxscaffold_6G00412450 |
| rosa_rugosa | Rorug03G0097600 |
| rosa_samantha | Rh3AG147300 Rh3BG169900 Rh3DG205200 |
| rosa_wichuraiana | Rw3G013860 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 646 |
| AccB1I | GGYRCC | 1 cut(s) | 853 |
| AciI | CCGC | 5 cut(s) | 533, 536, 551, 554, 833 |
| AclWI | GGATC | 2 cut(s) | 851, 969 |
| AcoI | YGGCCR | 2 cut(s) | 299, 1097 |
| AcsI | RAATTY | 6 cut(s) | 260, 273, 338, 934, 1312, 1322 |
| AcyI | GRCGYC | 2 cut(s) | 719, 854 |
| AfaI | GTAC | 3 cut(s) | 367, 567, 911 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1275 |
| AflII | CTTAAG | 1 cut(s) | 983 |
| AjnI | CCWGG | 1 cut(s) | 1375 |
| AluBI | AGCT | 7 cut(s) | 200, 204, 410, 596, 657, 953, 1302 |
| AluI | AGCT | 7 cut(s) | 200, 204, 410, 596, 657, 953, 1302 |
| Alw21I | GWGCWC | 2 cut(s) | 659, 764 |
| Alw26I | GTCTC | 3 cut(s) | 43, 596, 1202 |
| AlwI | GGATC | 2 cut(s) | 851, 969 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 638, 835, 953 |
| Ama87I | CYCGRG | 3 cut(s) | 667, 710, 1268 |
| AoxI | GGCC | 2 cut(s) | 299, 1097 |
| ApeKI | GCWGC | 8 cut(s) | 410, 596, 623, 626, 629, 835, 1115, 1421 |
| ApoI | RAATTY | 6 cut(s) | 260, 273, 338, 934, 1312, 1322 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 851, 863, 883, 895 |
| AseI | ATTAAT | 1 cut(s) | 579 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1338 |
| AspLEI | GCGC | 1 cut(s) | 856 |
| AspS9I | GGNCC | 3 cut(s) | 391, 1145, 1264 |
| AsuHPI | GGTGA | 3 cut(s) | 120, 727, 1144 |
| AsuNHI | GCTAGC | 1 cut(s) | 200 |
| AvaI | CYCGRG | 3 cut(s) | 667, 710, 1268 |
| AvaII | GGWCC | 3 cut(s) | 391, 1145, 1264 |
| BalI | TGGCCA | 2 cut(s) | 301, 1099 |
| BanI | GGYRCC | 1 cut(s) | 853 |
| BanII | GRGCYC | 1 cut(s) | 659 |
| BbsI | GAAGAC | 4 cut(s) | 805, 1353, 1400, 1406 |
| Bbv12I | GWGCWC | 2 cut(s) | 659, 764 |
| BbvCI | CCTCAGC | 2 cut(s) | 828, 890 |
| BbvI | GCAGC | 8 cut(s) | 397, 583, 635, 638, 641, 822, 1127, 1408 |
| BccI | CCATC | 2 cut(s) | 1170, 1269 |
| BceAI | ACGGC | 3 cut(s) | 398, 485, 768 |
| BciT130I | CCWGG | 1 cut(s) | 1377 |
| BclI | TGATCA | 1 cut(s) | 1134 |
| BcoDI | GTCTC | 3 cut(s) | 43, 596, 1202 |
| BfaI | CTAG | 4 cut(s) | 201, 489, 803, 1212 |
| BfmI | CTRYAG | 2 cut(s) | 597, 1422 |
| BfoI | RGCGCY | 1 cut(s) | 857 |
| BfrI | CTTAAG | 1 cut(s) | 983 |
| BfuAI | ACCTGC | 1 cut(s) | 646 |
| Bme1390I | CCNGG | 1 cut(s) | 1377 |
| Bme18I | GGWCC | 3 cut(s) | 391, 1145, 1264 |
| BmeT110I | CYCGRG | 3 cut(s) | 667, 710, 1268 |
| BmgT120I | GGNCC | 3 cut(s) | 391, 1145, 1264 |
| BmiI | GGNNCC | 6 cut(s) | 392, 825, 855, 1265, 1266, 1432 |
| BmrFI | CCNGG | 1 cut(s) | 1377 |
| BmrI | ACTGGG | 1 cut(s) | 315 |
| BmsI | GCATC | 1 cut(s) | 487 |
| BmtI | GCTAGC | 1 cut(s) | 204 |
| BmuI | ACTGGG | 1 cut(s) | 315 |
| BpiI | GAAGAC | 4 cut(s) | 805, 1353, 1400, 1406 |
| Bpu10I | CCTNAGC | 2 cut(s) | 828, 890 |
| BpuEI | CTTGAG | 2 cut(s) | 44, 1216 |
| BsaHI | GRCGYC | 2 cut(s) | 719, 854 |
| BsaJI | CCNNGG | 2 cut(s) | 501, 711 |
| BsaWI | WCCGGW | 1 cut(s) | 568 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1275 |
| Bse1I | ACTGG | 4 cut(s) | 176, 302, 321, 528 |
| Bse3DI | GCAATG | 1 cut(s) | 975 |
| BseBI | CCWGG | 1 cut(s) | 1377 |
| BseDI | CCNNGG | 2 cut(s) | 501, 711 |
| BseGI | GGATG | 2 cut(s) | 577, 1181 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1275 |
| BseMI | GCAATG | 1 cut(s) | 975 |
| BseMII | CTCAG | 4 cut(s) | 465, 842, 881, 1084 |
| BseNI | ACTGG | 4 cut(s) | 176, 302, 321, 528 |
| BseRI | GAGGAG | 1 cut(s) | 1443 |
| BseXI | GCAGC | 8 cut(s) | 397, 583, 635, 638, 641, 822, 1127, 1408 |
| BseYI | CCCAGC | 1 cut(s) | 1028 |
| BsgI | GTGCAG | 2 cut(s) | 65, 1422 |
| BshFI | GGCC | 2 cut(s) | 301, 1099 |
| BshNI | GGYRCC | 1 cut(s) | 853 |
| BsiHKAI | GWGCWC | 2 cut(s) | 659, 764 |
| BsiHKCI | CYCGRG | 3 cut(s) | 667, 710, 1268 |
| BsiSI | CCGG | 1 cut(s) | 569 |
| BslFI | GGGAC | 2 cut(s) | 1105, 1277 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1275 |
| BsmAI | GTCTC | 3 cut(s) | 43, 596, 1202 |
| BsmFI | GGGAC | 2 cut(s) | 1105, 1277 |
| BsmI | GAATGC | 1 cut(s) | 1388 |
| BsnI | GGCC | 2 cut(s) | 301, 1099 |
| BsoBI | CYCGRG | 3 cut(s) | 667, 710, 1268 |
| Bsp1286I | GDGCHC | 2 cut(s) | 659, 764 |
| Bsp1407I | TGTACA | 1 cut(s) | 909 |
| Bsp143I | GATC | 5 cut(s) | 843, 961, 1048, 1134, 1392 |
| BspACI | CCGC | 5 cut(s) | 533, 536, 551, 554, 833 |
| BspANI | GGCC | 2 cut(s) | 301, 1099 |
| BspCNI | CTCAG | 4 cut(s) | 464, 841, 882, 1083 |
| BspLI | GGNNCC | 6 cut(s) | 392, 825, 855, 1265, 1266, 1432 |
| BspMAI | CTGCAG | 2 cut(s) | 601, 1426 |
| BspMI | ACCTGC | 1 cut(s) | 646 |
| BspOI | GCTAGC | 1 cut(s) | 204 |
| BspPI | GGATC | 2 cut(s) | 851, 969 |
| BspT107I | GGYRCC | 1 cut(s) | 853 |
| BspTI | CTTAAG | 1 cut(s) | 983 |
| BsrDI | GCAATG | 1 cut(s) | 975 |
| BsrGI | TGTACA | 1 cut(s) | 909 |
| BsrI | ACTGG | 4 cut(s) | 176, 302, 321, 528 |
| BssECI | CCNNGG | 2 cut(s) | 501, 711 |
| BssMI | GATC | 5 cut(s) | 843, 961, 1048, 1134, 1392 |
| BssNI | GRCGYC | 2 cut(s) | 719, 854 |
| Bst2UI | CCWGG | 1 cut(s) | 1377 |
| Bst6I | CTCTTC | 3 cut(s) | 83, 380, 1299 |
| BstACI | GRCGYC | 2 cut(s) | 719, 854 |
| BstAFI | CTTAAG | 1 cut(s) | 983 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 638 |
| BstAUI | TGTACA | 1 cut(s) | 909 |
| BstC8I | GCNNGC | 1 cut(s) | 202 |
| BstDEI | CTNAG | 4 cut(s) | 451, 828, 890, 1070 |
| BstDSI | CCRYGG | 1 cut(s) | 501 |
| BstF5I | GGATG | 2 cut(s) | 577, 1181 |
| BstH2I | RGCGCY | 1 cut(s) | 857 |
| BstHHI | GCGC | 1 cut(s) | 856 |
| BstKTI | GATC | 5 cut(s) | 846, 964, 1051, 1137, 1395 |
| BstMAI | GTCTC | 3 cut(s) | 43, 596, 1202 |
| BstMBI | GATC | 5 cut(s) | 843, 961, 1048, 1134, 1392 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 52, 629, 638, 1112, 1186, 1430 |
| BstNI | CCWGG | 1 cut(s) | 1377 |
| BstSCI | CCNGG | 1 cut(s) | 1375 |
| BstSFI | CTRYAG | 2 cut(s) | 597, 1422 |
| BstV1I | GCAGC | 8 cut(s) | 397, 583, 635, 638, 641, 822, 1127, 1408 |
| BstV2I | GAAGAC | 4 cut(s) | 805, 1353, 1400, 1406 |
| BsuRI | GGCC | 2 cut(s) | 301, 1099 |
| BtgI | CCRYGG | 1 cut(s) | 501 |
| BtsCI | GGATG | 2 cut(s) | 577, 1181 |
| BtsI | GCAGTG | 2 cut(s) | 744, 1434 |
| BtsIMutI | CAGTG | 3 cut(s) | 521, 744, 1434 |
| BveI | ACCTGC | 1 cut(s) | 646 |
| Cac8I | GCNNGC | 1 cut(s) | 202 |
| CaiI | CAGNNNCTG | 3 cut(s) | 638, 835, 953 |
| CfoI | GCGC | 1 cut(s) | 856 |
| Cfr13I | GGNCC | 3 cut(s) | 391, 1145, 1264 |
| CseI | GACGC | 2 cut(s) | 727, 953 |
| Csp6I | GTAC | 3 cut(s) | 366, 566, 910 |
| CviAII | CATG | 3 cut(s) | 1095, 1396, 1418 |
| CviQI | GTAC | 3 cut(s) | 366, 566, 910 |
| DdeI | CTNAG | 4 cut(s) | 451, 828, 890, 1070 |
| DinI | GGCGCC | 1 cut(s) | 855 |
| DpnI | GATC | 5 cut(s) | 845, 963, 1050, 1136, 1394 |
| DpnII | GATC | 5 cut(s) | 843, 961, 1048, 1134, 1392 |
| DraI | TTTAAA | 1 cut(s) | 781 |
| EaeI | YGGCCR | 2 cut(s) | 299, 1097 |
| Eam1104I | CTCTTC | 3 cut(s) | 83, 380, 1299 |
| EarI | CTCTTC | 3 cut(s) | 83, 380, 1299 |
| EciI | GGCGGA | 1 cut(s) | 522 |
| Ecl136II | GAGCTC | 1 cut(s) | 657 |
| Eco24I | GRGCYC | 1 cut(s) | 659 |
| Eco47I | GGWCC | 3 cut(s) | 391, 1145, 1264 |
| Eco53kI | GAGCTC | 1 cut(s) | 657 |
| Eco88I | CYCGRG | 3 cut(s) | 667, 710, 1268 |
| EcoICRI | GAGCTC | 1 cut(s) | 657 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1145, 1264 |
| EcoRI | GAATTC | 1 cut(s) | 1312 |
| EcoRII | CCWGG | 1 cut(s) | 1375 |
| EcoT38I | GRGCYC | 1 cut(s) | 659 |
| EgeI | GGCGCC | 1 cut(s) | 855 |
| EheI | GGCGCC | 1 cut(s) | 855 |
| FaeI | CATG | 3 cut(s) | 1098, 1399, 1421 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1225, 1257, 1326, 1358 |
| FaqI | GGGAC | 2 cut(s) | 1105, 1277 |
| FatI | CATG | 3 cut(s) | 1094, 1395, 1417 |
| FbaI | TGATCA | 1 cut(s) | 1134 |
| FokI | GGATG | 2 cut(s) | 584, 1188 |
| FriOI | GRGCYC | 1 cut(s) | 659 |
| FspBI | CTAG | 4 cut(s) | 201, 489, 803, 1212 |
| GlaI | GCGC | 1 cut(s) | 855 |
| GsaI | CCCAGC | 1 cut(s) | 1032 |
| HaeII | RGCGCY | 1 cut(s) | 857 |
| HaeIII | GGCC | 2 cut(s) | 301, 1099 |
| HapII | CCGG | 1 cut(s) | 569 |
| HgaI | GACGC | 2 cut(s) | 727, 953 |
| HhaI | GCGC | 1 cut(s) | 856 |
| Hin1I | GRCGYC | 2 cut(s) | 719, 854 |
| Hin1II | CATG | 3 cut(s) | 1098, 1399, 1421 |
| Hin6I | GCGC | 1 cut(s) | 854 |
| HinP1I | GCGC | 1 cut(s) | 854 |
| HinfI | GANTC | 3 cut(s) | 866, 1157, 1368 |
| HpaII | CCGG | 1 cut(s) | 569 |
| HphI | GGTGA | 3 cut(s) | 120, 727, 1144 |
| Hpy166II | GTNNAC | 3 cut(s) | 675, 1021, 1045 |
| Hpy188I | TCNGA | 5 cut(s) | 253, 661, 883, 1073, 1311 |
| Hpy188III | TCNNGA | 2 cut(s) | 927, 1343 |
| Hpy8I | GTNNAC | 3 cut(s) | 675, 1021, 1045 |
| Hpy99I | CGWCG | 1 cut(s) | 754 |
| HpyAV | CCTTC | 4 cut(s) | 76, 720, 1123, 1136 |
| HpyCH4V | TGCA | 6 cut(s) | 46, 599, 641, 1115, 1424, 1439 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 52, 629, 638, 1112, 1186, 1430 |
| HpyF3I | CTNAG | 4 cut(s) | 451, 828, 890, 1070 |
| Hsp92I | GRCGYC | 2 cut(s) | 719, 854 |
| Hsp92II | CATG | 3 cut(s) | 1098, 1399, 1421 |
| HspAI | GCGC | 1 cut(s) | 854 |
| KasI | GGCGCC | 1 cut(s) | 853 |
| KflI | GGGWCCC | 1 cut(s) | 1264 |
| Ksp22I | TGATCA | 1 cut(s) | 1134 |
| Kzo9I | GATC | 5 cut(s) | 843, 961, 1048, 1134, 1392 |
| LmnI | GCTCC | 6 cut(s) | 209, 466, 662, 1307, 1391, 1430 |
| Lsp1109I | GCAGC | 8 cut(s) | 397, 583, 635, 638, 641, 822, 1127, 1408 |
| LweI | GCATC | 1 cut(s) | 487 |
| MaeI | CTAG | 4 cut(s) | 201, 489, 803, 1212 |
| MaeIII | GTNAC | 3 cut(s) | 323, 715, 742 |
| MalI | GATC | 5 cut(s) | 845, 963, 1050, 1136, 1394 |
| MboI | GATC | 5 cut(s) | 843, 961, 1048, 1134, 1392 |
| MfeI | CAATTG | 1 cut(s) | 1101 |
| MhlI | GDGCHC | 2 cut(s) | 659, 764 |
| MlsI | TGGCCA | 2 cut(s) | 301, 1099 |
| MluNI | TGGCCA | 2 cut(s) | 301, 1099 |
| Mly113I | GGCGCC | 1 cut(s) | 854 |
| MlyI | GAGTC | 1 cut(s) | 875 |
| MmeI | TCCRAC | 1 cut(s) | 488 |
| Mox20I | TGGCCA | 2 cut(s) | 301, 1099 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1338 |
| MscI | TGGCCA | 2 cut(s) | 301, 1099 |
| MseI | TTAA | 9 cut(s) | 5, 219, 227, 236, 342, 579, 774, 780, 984 |
| Msp20I | TGGCCA | 2 cut(s) | 301, 1099 |
| MspA1I | CMGCKG | 1 cut(s) | 835 |
| MspCI | CTTAAG | 1 cut(s) | 983 |
| MspI | CCGG | 1 cut(s) | 569 |
| MspR9I | CCNGG | 1 cut(s) | 1377 |
| MunI | CAATTG | 1 cut(s) | 1101 |
| Mva1269I | GAATGC | 1 cut(s) | 1388 |
| MvaI | CCWGG | 1 cut(s) | 1377 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 52, 629, 638, 1112, 1186, 1430 |
| NarI | GGCGCC | 1 cut(s) | 854 |
| NdeII | GATC | 5 cut(s) | 843, 961, 1048, 1134, 1392 |
| NheI | GCTAGC | 1 cut(s) | 200 |
| NlaIII | CATG | 3 cut(s) | 1098, 1399, 1421 |
| NlaIV | GGNNCC | 6 cut(s) | 392, 825, 855, 1265, 1266, 1432 |
| NmeAIII | GCCGAG | 1 cut(s) | 747 |
| NmuCI | GTSAC | 2 cut(s) | 715, 742 |
| PaeR7I | CTCGAG | 1 cut(s) | 667 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 492 |
| PctI | GAATGC | 1 cut(s) | 1388 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1338 |
| PfeI | GAWTC | 2 cut(s) | 1157, 1368 |
| PleI | GAGTC | 1 cut(s) | 874 |
| PluTI | GGCGCC | 1 cut(s) | 857 |
| PpsI | GAGTC | 1 cut(s) | 874 |
| PpuMI | RGGWCCY | 2 cut(s) | 1145, 1264 |
| PshBI | ATTAAT | 1 cut(s) | 579 |
| Psp124BI | GAGCTC | 1 cut(s) | 659 |
| Psp5II | RGGWCCY | 2 cut(s) | 1145, 1264 |
| Psp6I | CCWGG | 1 cut(s) | 1375 |
| PspFI | CCCAGC | 1 cut(s) | 1028 |
| PspGI | CCWGG | 1 cut(s) | 1375 |
| PspN4I | GGNNCC | 6 cut(s) | 392, 825, 855, 1265, 1266, 1432 |
| PspPI | GGNCC | 3 cut(s) | 391, 1145, 1264 |
| PspPPI | RGGWCCY | 2 cut(s) | 1145, 1264 |
| PspXI | VCTCGAGB | 1 cut(s) | 667 |
| PstI | CTGCAG | 2 cut(s) | 601, 1426 |
| PstNI | CAGNNNCTG | 3 cut(s) | 638, 835, 953 |
| RsaI | GTAC | 3 cut(s) | 367, 567, 911 |
| RsaNI | GTAC | 3 cut(s) | 366, 566, 910 |
| SacI | GAGCTC | 1 cut(s) | 659 |
| SaqAI | TTAA | 9 cut(s) | 5, 219, 227, 236, 342, 579, 774, 780, 984 |
| Sau3AI | GATC | 5 cut(s) | 843, 961, 1048, 1134, 1392 |
| Sau96I | GGNCC | 3 cut(s) | 391, 1145, 1264 |
| SchI | GAGTC | 1 cut(s) | 875 |
| ScrFI | CCNGG | 1 cut(s) | 1377 |
| SduI | GDGCHC | 2 cut(s) | 659, 764 |
| SfaNI | GCATC | 1 cut(s) | 487 |
| SfcI | CTRYAG | 2 cut(s) | 597, 1422 |
| SfoI | GGCGCC | 1 cut(s) | 855 |
| Sfr274I | CTCGAG | 1 cut(s) | 667 |
| SinI | GGWCC | 3 cut(s) | 391, 1145, 1264 |
| SlaI | CTCGAG | 1 cut(s) | 667 |
| SmlI | CTYRAG | 4 cut(s) | 59, 667, 983, 1231 |
| SmoI | CTYRAG | 4 cut(s) | 59, 667, 983, 1231 |
| SsiI | CCGC | 5 cut(s) | 533, 536, 551, 554, 833 |
| SspDI | GGCGCC | 1 cut(s) | 853 |
| SspMI | CTAG | 4 cut(s) | 201, 489, 803, 1212 |
| SstI | GAGCTC | 1 cut(s) | 659 |
| StyD4I | CCNGG | 1 cut(s) | 1375 |
| TaqI | TCGA | 4 cut(s) | 668, 869, 926, 1062 |
| TatI | WGTACW | 1 cut(s) | 909 |
| TauI | GCSGC | 3 cut(s) | 538, 556, 835 |
| TfiI | GAWTC | 2 cut(s) | 1157, 1368 |
| Tru1I | TTAA | 9 cut(s) | 5, 219, 227, 236, 342, 579, 774, 780, 984 |
| Tru9I | TTAA | 9 cut(s) | 5, 219, 227, 236, 342, 579, 774, 780, 984 |
| TscAI | CASTG | 3 cut(s) | 528, 751, 1441 |
| TseFI | GTSAC | 2 cut(s) | 715, 742 |
| TseI | GCWGC | 8 cut(s) | 410, 596, 623, 626, 629, 835, 1115, 1421 |
| Tsp45I | GTSAC | 2 cut(s) | 715, 742 |
| TspDTI | ATGAA | 8 cut(s) | 721, 888, 947, 1208, 1214, 1215, 1278, 1406 |
| TspGWI | ACGGA | 3 cut(s) | 386, 482, 878 |
| TspRI | CASTG | 3 cut(s) | 528, 751, 1441 |
| Vha464I | CTTAAG | 1 cut(s) | 983 |
| VpaK11BI | GGWCC | 3 cut(s) | 391, 1145, 1264 |
| VspI | ATTAAT | 1 cut(s) | 579 |
| XapI | RAATTY | 6 cut(s) | 260, 273, 338, 934, 1312, 1322 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 37, 520 |
| XhoI | CTCGAG | 1 cut(s) | 667 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1338 |
| XspI | CTAG | 4 cut(s) | 201, 489, 803, 1212 |