AT2G37130

Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0014364
Physical Location & Seq
Reverse (-)
15597921 .. 15600154
2234 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G37130.2

Sequence Viewer

Length: 984 bp
ATGGCCAATGCGAAGCCCTTTTGTCTCCTCGGCTTCTTTTGTCTGTTATTACAGTTATTCTCCATCTTCCATATCGGAAATGGGGAATTGGAGATGAACTATTACAAAGAGAGTTGTCCAAAAGCGGAAGAGATAATAAGACAACAAGTGGAGACGCTTTACTACAAACACGGTAACACAGCCGTATCTTGGCTCCGTAATCTCTTCCATGACTGTGTCGTCAAGTCGTGTGATGCGTCGCTGCTGCTAGAGACAGCGAGAGGTGTGGAATCTGAGCAGAAATCGAAGAGGAGTTTCGGTATGAGAAACTTTAAGTACGTTAAGATTATCAAAGACGCACTCGAGAAAGAGTGTCCTTCCACAGTCTCTTGTGCTGATATTGTCGCTCTTTCTGCGAGAGACGGTATTGTCATGTTGAAAGGGCCAAAGATAGAGATGATAAAGACAGGAAGGAGAGATAGTAGAGGGAGCTACTTGGGAGATGTTGAGACTCTAATCCCTAACCACAATGACTCTCTCTCATCTGTTATCTCCACCTTTAACTCCATTGGCATCGATGTCGAAGCCACCGTCGCTCTCTTAGGTGCTCACTCAGTGGGTAGGGTCCACTGCGTTAACCTAGTGCACCGGCTATACCCAACGATTGACCCTACTCTCGACCCAAGTTACGCCCTTTACTTAAAAAAACGTTGCCCAAGTCCAACACCGGACCCGAACGCCGTCTTGTACTCCCGTAACGATCGTGAGACTCCGATGGTTGTGGACAACATGTATTATAAGAACATCATGGCCCATAAGGGGCTTCTTGTCATTGATGATGAGCTAGCCACCGATCCCAGGACCGCACCGTTTGTGGCCAAGATGGCTGCGGACAATAATTACTTCCATGAGCAGTTCTCACGTGGCGTCAGGCTCTTGTCCGAGACCAACCCGCTCACGGGAGACCAAGGGGAGATCAGGAAGGATTGTCGTTATGTGAACTAA

Protein Analysis

327

Amino Acids

36.74

Weight (kDa)

7.09

Isoelectric Point (pI)

39.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
peroxidase PF00141 15 - 260 1.4e-68 Peroxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014364)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G37130 AT2G37130
fragaria_vesca FvH4_6g15580
malus_domestica MD04G1101700.v1.1
prunus_persica Prupe.6G239400_v2.0.a1 Prupe.6G239400_v2.0.a1
pyrus_communis pycom04g09720
rosa_chinensis RchiOBHm_Chr3g0469141
rosa_laevigata RLG00000024370
rosa_multiflora Rmu_sc0000302.1_g000012
rosa_roxburghii Rroxscaffold_6G00412160
rosa_rugosa Rorug03G0100000 Rorug03G0100000
rosa_samantha Rh3AG149100 Rh3BG172300 Rh3DG203300
rosa_wichuraiana Rw3G014060

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 777
AasI GACNNNNNNGTC 2 cut(s) 218, 407
AccBSI CCGCTC 1 cut(s) 934
AciI CCGC 4 cut(s) 125, 843, 869, 932
AclI AACGTT 1 cut(s) 688
AclWI GGATC 1 cut(s) 827
AcoI YGGCCR 2 cut(s) 3, 855
AcvI CACGTG 1 cut(s) 902
AcyI GRCGYC 1 cut(s) 906
AdeI CACNNNGTG 1 cut(s) 595
AfaI GTAC 2 cut(s) 317, 728
AfiI CCNNNNNNNGG 5 cut(s) 189, 798, 837, 937, 938
AflIII ACRYGT 1 cut(s) 768
AgsI TTSAA 1 cut(s) 418
AjnI CCWGG 1 cut(s) 836
AluBI AGCT 2 cut(s) 471, 823
AluI AGCT 2 cut(s) 471, 823
Alw21I GWGCWC 2 cut(s) 589, 627
Alw26I GTCTC 9 cut(s) 29, 146, 245, 370, 393, 482, 740, 917, 936
Alw44I GTGCAC 1 cut(s) 623
AlwI GGATC 1 cut(s) 827
Ama87I CYCGRG 1 cut(s) 341
AoxI GGCC 4 cut(s) 3, 422, 789, 855
ApaLI GTGCAC 1 cut(s) 623
ApeKI GCWGC 3 cut(s) 241, 244, 866
ArsI GACNNNNNNTTYG 2 cut(s) 555, 587
AspS9I GGNCC 5 cut(s) 422, 604, 709, 790, 840
AsuNHI GCTAGC 1 cut(s) 823
AvaI CYCGRG 1 cut(s) 341
AvaII GGWCC 3 cut(s) 604, 709, 840
BaeGI GKGCMC 1 cut(s) 627
BaeI ACNNNNGTAYC 2 cut(s) 168, 201
BalI TGGCCA 2 cut(s) 5, 857
BbrPI CACGTG 1 cut(s) 902
Bbv12I GWGCWC 2 cut(s) 589, 627
BbvI GCAGC 3 cut(s) 228, 231, 853
BccI CCATC 3 cut(s) 71, 748, 856
BceAI ACGGC 2 cut(s) 167, 704
BcgI CGANNNNNNTGC 2 cut(s) 541, 575
BciT130I CCWGG 1 cut(s) 838
BcoDI GTCTC 9 cut(s) 29, 146, 245, 370, 393, 482, 740, 917, 936
BfaI CTAG 3 cut(s) 248, 620, 824
BglI GCCNNNNNGGC 1 cut(s) 863
BisI GCNGC 3 cut(s) 242, 245, 867
BlsI GCNGC 3 cut(s) 243, 246, 868
Bme1390I CCNGG 1 cut(s) 838
Bme18I GGWCC 3 cut(s) 604, 709, 840
BmeT110I CYCGRG 1 cut(s) 341
BmgT120I GGNCC 5 cut(s) 422, 604, 709, 790, 840
BmiI GGNNCC 3 cut(s) 194, 605, 711
BmrFI CCNGG 1 cut(s) 838
BmsI GCATC 2 cut(s) 223, 561
BmtI GCTAGC 1 cut(s) 827
BplI GAGNNNNNCTC 2 cut(s) 881, 913
Bsa29I ATCGAT 1 cut(s) 555
BsaAI YACGTR 1 cut(s) 902
BsaHI GRCGYC 1 cut(s) 906
BsaI GGTCTC 2 cut(s) 917, 936
BsaJI CCNNGG 3 cut(s) 28, 836, 946
BsaWI WCCGGW 1 cut(s) 706
BsaXI ACNNNNNCTCC 4 cut(s) 283, 313, 445, 475
Bsc4I CCNNNNNNNGG 5 cut(s) 189, 798, 837, 937, 938
Bse118I RCCGGY 1 cut(s) 627
BseBI CCWGG 1 cut(s) 838
BseCI ATCGAT 1 cut(s) 555
BseDI CCNNGG 3 cut(s) 28, 836, 946
BseLI CCNNNNNNNGG 5 cut(s) 189, 798, 837, 937, 938
BseMII CTCAG 2 cut(s) 264, 606
BseRI GAGGAG 2 cut(s) 17, 304
BseSI GKGCMC 1 cut(s) 627
BseXI GCAGC 3 cut(s) 228, 231, 853
Bsh1285I CGRYCG 1 cut(s) 742
BshFI GGCC 4 cut(s) 5, 424, 791, 857
BshVI ATCGAT 1 cut(s) 555
BsiEI CGRYCG 1 cut(s) 742
BsiHKAI GWGCWC 2 cut(s) 589, 627
BsiHKCI CYCGRG 1 cut(s) 341
BsiSI CCGG 2 cut(s) 628, 707
BslI CCNNNNNNNGG 5 cut(s) 189, 798, 837, 937, 938
BsmAI GTCTC 9 cut(s) 29, 146, 245, 370, 393, 482, 740, 917, 936
BsmBI CGTCTC 2 cut(s) 146, 393
BsnI GGCC 4 cut(s) 5, 424, 791, 857
Bso31I GGTCTC 2 cut(s) 917, 936
BsoBI CYCGRG 1 cut(s) 341
Bsp1286I GDGCHC 2 cut(s) 589, 627
Bsp143I GATC 3 cut(s) 739, 832, 954
BspACI CCGC 4 cut(s) 125, 843, 869, 932
BspANI GGCC 4 cut(s) 5, 424, 791, 857
BspCNI CTCAG 2 cut(s) 265, 605
BspDI ATCGAT 1 cut(s) 555
BspLI GGNNCC 3 cut(s) 194, 605, 711
BspOI GCTAGC 1 cut(s) 827
BspPI GGATC 1 cut(s) 827
BspTNI GGTCTC 2 cut(s) 917, 936
BsrBI CCGCTC 1 cut(s) 934
BsrFI RCCGGY 1 cut(s) 627
BssAI RCCGGY 1 cut(s) 627
BssECI CCNNGG 3 cut(s) 28, 836, 946
BssMI GATC 3 cut(s) 739, 832, 954
BssNI GRCGYC 1 cut(s) 906
BssT1I CCWWGG 1 cut(s) 946
Bst2UI CCWGG 1 cut(s) 838
Bst4CI ACNGT 7 cut(s) 54, 173, 215, 364, 404, 571, 849
Bst6I CTCTTC 3 cut(s) 123, 209, 281
BstACI GRCGYC 1 cut(s) 906
BstBAI YACGTR 1 cut(s) 902
BstC8I GCNNGC 1 cut(s) 825
BstDEI CTNAG 3 cut(s) 273, 580, 592
BstKTI GATC 3 cut(s) 742, 835, 957
BstMAI GTCTC 9 cut(s) 29, 146, 245, 370, 393, 482, 740, 917, 936
BstMBI GATC 3 cut(s) 739, 832, 954
BstMCI CGRYCG 1 cut(s) 742
BstMWI GCNNNNNNNGC 3 cut(s) 392, 572, 863
BstNI CCWGG 1 cut(s) 838
BstNSI RCATGY 1 cut(s) 772
BstSCI CCNGG 1 cut(s) 836
BstSLI GKGCMC 1 cut(s) 627
BstV1I GCAGC 3 cut(s) 228, 231, 853
Bsu15I ATCGAT 1 cut(s) 555
BsuRI GGCC 4 cut(s) 5, 424, 791, 857
BsuTUI ATCGAT 1 cut(s) 555
BtsI GCAGTG 1 cut(s) 607
BtsIMutI CAGTG 2 cut(s) 600, 607
Cac8I GCNNGC 1 cut(s) 825
Cfr10I RCCGGY 1 cut(s) 627
Cfr13I GGNCC 5 cut(s) 422, 604, 709, 790, 840
ClaI ATCGAT 1 cut(s) 555
CseI GACGC 4 cut(s) 163, 225, 344, 895
Csp6I GTAC 2 cut(s) 316, 727
CviAII CATG 5 cut(s) 209, 412, 769, 787, 887
CviQI GTAC 2 cut(s) 316, 727
DdeI CTNAG 3 cut(s) 273, 580, 592
DpnI GATC 3 cut(s) 741, 834, 956
DpnII GATC 3 cut(s) 739, 832, 954
DraIII CACNNNGTG 1 cut(s) 595
DrdI GACNNNNNNGTC 2 cut(s) 218, 407
DseDI GACNNNNNNGTC 2 cut(s) 218, 407
EaeI YGGCCR 2 cut(s) 3, 855
Eam1104I CTCTTC 3 cut(s) 123, 209, 281
EarI CTCTTC 3 cut(s) 123, 209, 281
Eco130I CCWWGG 1 cut(s) 946
Eco31I GGTCTC 2 cut(s) 917, 936
Eco47I GGWCC 3 cut(s) 604, 709, 840
Eco72I CACGTG 1 cut(s) 902
Eco88I CYCGRG 1 cut(s) 341
EcoRII CCWGG 1 cut(s) 836
EcoT14I CCWWGG 1 cut(s) 946
ErhI CCWWGG 1 cut(s) 946
Esp3I CGTCTC 2 cut(s) 146, 393
FaeI CATG 5 cut(s) 212, 415, 772, 790, 890
FatI CATG 5 cut(s) 208, 411, 768, 786, 886
FauI CCCGC 1 cut(s) 939
Fnu4HI GCNGC 3 cut(s) 242, 245, 867
Fsp4HI GCNGC 3 cut(s) 242, 245, 867
FspBI CTAG 3 cut(s) 248, 620, 824
GluI GCNGC 3 cut(s) 242, 245, 867
HaeIII GGCC 4 cut(s) 5, 424, 791, 857
HapII CCGG 2 cut(s) 628, 707
HgaI GACGC 4 cut(s) 163, 225, 344, 895
Hin1I GRCGYC 1 cut(s) 906
Hin1II CATG 5 cut(s) 212, 415, 772, 790, 890
HincII GTYRAC 1 cut(s) 616
HindII GTYRAC 1 cut(s) 616
HinfI GANTC 4 cut(s) 269, 490, 512, 748
HpaI GTTAAC 1 cut(s) 616
HpaII CCGG 2 cut(s) 628, 707
Hpy166II GTNNAC 5 cut(s) 607, 616, 625, 763, 979
Hpy188I TCNGA 4 cut(s) 77, 274, 753, 922
Hpy188III TCNNGA 4 cut(s) 343, 656, 743, 958
Hpy8I GTNNAC 5 cut(s) 607, 616, 625, 763, 979
Hpy99I CGWCG 2 cut(s) 241, 575
HpyAV CCTTC 3 cut(s) 366, 444, 955
HpyCH4III ACNGT 7 cut(s) 54, 173, 215, 364, 404, 571, 849
HpyCH4IV ACGT 3 cut(s) 318, 688, 901
HpyCH4V TGCA 1 cut(s) 625
HpyF10VI GCNNNNNNNGC 3 cut(s) 392, 572, 863
HpyF3I CTNAG 3 cut(s) 273, 580, 592
HpySE526I ACGT 3 cut(s) 318, 688, 901
Hsp92I GRCGYC 1 cut(s) 906
Hsp92II CATG 5 cut(s) 212, 415, 772, 790, 890
KspAI GTTAAC 1 cut(s) 616
Kzo9I GATC 3 cut(s) 739, 832, 954
LmnI GCTCC 2 cut(s) 198, 468
LpnPI CCDG 7 cut(s) 432, 641, 720, 823, 850, 895, 943
Lsp1109I GCAGC 3 cut(s) 228, 231, 853
LweI GCATC 2 cut(s) 223, 561
MaeI CTAG 3 cut(s) 248, 620, 824
MaeII ACGT 3 cut(s) 318, 688, 901
MaeIII GTNAC 3 cut(s) 173, 665, 734
MalI GATC 3 cut(s) 741, 834, 956
MbiI CCGCTC 1 cut(s) 934
MboI GATC 3 cut(s) 739, 832, 954
MboII GAAGA 4 cut(s) 58, 140, 196, 298
MhlI GDGCHC 2 cut(s) 589, 627
MlsI TGGCCA 2 cut(s) 5, 857
MluCI AATT 2 cut(s) 86, 877
MluNI TGGCCA 2 cut(s) 5, 857
MlyI GAGTC 3 cut(s) 484, 506, 742
MmeI TCCRAC 1 cut(s) 725
MnlI CCTC 4 cut(s) 38, 254, 282, 458
Mox20I TGGCCA 2 cut(s) 5, 857
MscI TGGCCA 2 cut(s) 5, 857
MseI TTAA 5 cut(s) 312, 321, 540, 615, 680
MslI CAYNNNNRTG 1 cut(s) 213
Msp20I TGGCCA 2 cut(s) 5, 857
MspI CCGG 2 cut(s) 628, 707
MspR9I CCNGG 1 cut(s) 838
MvaI CCWGG 1 cut(s) 838
MwoI GCNNNNNNNGC 3 cut(s) 392, 572, 863
NdeII GATC 3 cut(s) 739, 832, 954
NheI GCTAGC 1 cut(s) 823
NlaIII CATG 5 cut(s) 212, 415, 772, 790, 890
NlaIV GGNNCC 3 cut(s) 194, 605, 711
NmeAIII GCCGAG 1 cut(s) 9
NspI RCATGY 1 cut(s) 772
PaeR7I CTCGAG 1 cut(s) 341
PciI ACATGT 1 cut(s) 768
PcsI WCGNNNNNNNCGW 2 cut(s) 233, 567
PfeI GAWTC 1 cut(s) 269
PflFI GACNNNGTC 1 cut(s) 215
PkrI GCNGC 3 cut(s) 243, 246, 868
Ple19I CGATCG 1 cut(s) 742
PleI GAGTC 3 cut(s) 484, 506, 742
PmaCI CACGTG 1 cut(s) 902
PmlI CACGTG 1 cut(s) 902
PpsI GAGTC 3 cut(s) 484, 506, 742
Ppu21I YACGTR 1 cut(s) 902
PscI ACATGT 1 cut(s) 768
PsiI TTATAA 1 cut(s) 777
Psp1406I AACGTT 1 cut(s) 688
Psp6I CCWGG 1 cut(s) 836
PspCI CACGTG 1 cut(s) 902
PspGI CCWGG 1 cut(s) 836
PspN4I GGNNCC 3 cut(s) 194, 605, 711
PspPI GGNCC 5 cut(s) 422, 604, 709, 790, 840
PsyI GACNNNGTC 1 cut(s) 215
PvuI CGATCG 1 cut(s) 742
RsaI GTAC 2 cut(s) 317, 728
RsaNI GTAC 2 cut(s) 316, 727
RseI CAYNNNNRTG 1 cut(s) 213
SaqAI TTAA 5 cut(s) 312, 321, 540, 615, 680
SatI GCNGC 3 cut(s) 242, 245, 867
Sau3AI GATC 3 cut(s) 739, 832, 954
Sau96I GGNCC 5 cut(s) 422, 604, 709, 790, 840
SchI GAGTC 3 cut(s) 484, 506, 742
ScrFI CCNGG 1 cut(s) 838
SduI GDGCHC 2 cut(s) 589, 627
SetI ASST 9 cut(s) 265, 321, 473, 539, 586, 621, 691, 825, 904
SfaNI GCATC 2 cut(s) 223, 561
Sfr274I CTCGAG 1 cut(s) 341
SinI GGWCC 3 cut(s) 604, 709, 840
SlaI CTCGAG 1 cut(s) 341
SmiMI CAYNNNNRTG 1 cut(s) 213
SmlI CTYRAG 1 cut(s) 341
SmoI CTYRAG 1 cut(s) 341
Sse9I AATT 2 cut(s) 86, 877
SsiI CCGC 4 cut(s) 125, 843, 869, 932
SspMI CTAG 3 cut(s) 248, 620, 824
StyD4I CCNGG 1 cut(s) 836
StyI CCWWGG 1 cut(s) 946
TaaI ACNGT 7 cut(s) 54, 173, 215, 364, 404, 571, 849
TaiI ACGT 3 cut(s) 321, 691, 904
TaqI TCGA 5 cut(s) 284, 342, 555, 561, 657
TasI AATT 2 cut(s) 86, 877
TatI WGTACW 1 cut(s) 726
TfiI GAWTC 1 cut(s) 269
Tru1I TTAA 5 cut(s) 312, 321, 540, 615, 680
Tru9I TTAA 5 cut(s) 312, 321, 540, 615, 680
TscAI CASTG 2 cut(s) 600, 614
TseI GCWGC 3 cut(s) 241, 244, 866
TspDTI ATGAA 1 cut(s) 110
TspGWI ACGGA 1 cut(s) 185
TspRI CASTG 2 cut(s) 600, 614
Tth111I GACNNNGTC 1 cut(s) 215
VneI GTGCAC 1 cut(s) 623
VpaK11BI GGWCC 3 cut(s) 604, 709, 840
XceI RCATGY 1 cut(s) 772
XcmI CCANNNNNNNNNTGG 1 cut(s) 77
XhoI CTCGAG 1 cut(s) 341
XspI CTAG 3 cut(s) 248, 620, 824
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.