Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G37130 AT2G37130 |
| fragaria_vesca | FvH4_6g15580 |
| malus_domestica | MD04G1101700.v1.1 |
| prunus_persica | Prupe.6G239400_v2.0.a1 Prupe.6G239400_v2.0.a1 |
| pyrus_communis | pycom04g09720 |
| rosa_chinensis | RchiOBHm_Chr3g0469141 |
| rosa_laevigata | RLG00000024370 |
| rosa_multiflora | Rmu_sc0000302.1_g000012 |
| rosa_roxburghii | Rroxscaffold_6G00412160 |
| rosa_rugosa | Rorug03G0100000 Rorug03G0100000 |
| rosa_samantha | Rh3AG149100 Rh3BG172300 Rh3DG203300 |
| rosa_wichuraiana | Rw3G014060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 690 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 938 |
| AciI | CCGC | 1 cut(s) | 428 |
| AclWI | GGATC | 3 cut(s) | 641, 653, 822 |
| AcsI | RAATTY | 1 cut(s) | 310 |
| AcuI | CTGAAG | 2 cut(s) | 150, 507 |
| AdeI | CACNNNGTG | 2 cut(s) | 613, 938 |
| AfaI | GTAC | 4 cut(s) | 320, 624, 677, 926 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 192, 938 |
| AgsI | TTSAA | 4 cut(s) | 74, 563, 790, 886 |
| AluBI | AGCT | 7 cut(s) | 33, 91, 128, 160, 297, 587, 839 |
| AluI | AGCT | 7 cut(s) | 33, 91, 128, 160, 297, 587, 839 |
| Alw21I | GWGCWC | 3 cut(s) | 93, 531, 589 |
| Alw26I | GTCTC | 2 cut(s) | 193, 450 |
| AlwI | GGATC | 3 cut(s) | 641, 653, 822 |
| AoxI | GGCC | 2 cut(s) | 425, 685 |
| ApeKI | GCWGC | 2 cut(s) | 5, 905 |
| ApoI | RAATTY | 1 cut(s) | 310 |
| AspS9I | GGNCC | 2 cut(s) | 425, 943 |
| AsuHPI | GGTGA | 1 cut(s) | 145 |
| AvaII | GGWCC | 1 cut(s) | 943 |
| BaeGI | GKGCMC | 1 cut(s) | 695 |
| BanI | GGYRCC | 1 cut(s) | 690 |
| BanII | GRGCYC | 2 cut(s) | 93, 589 |
| BbsI | GAAGAC | 1 cut(s) | 513 |
| Bbv12I | GWGCWC | 3 cut(s) | 93, 531, 589 |
| BbvI | GCAGC | 1 cut(s) | 892 |
| BccI | CCATC | 2 cut(s) | 398, 856 |
| BceAI | ACGGC | 2 cut(s) | 170, 832 |
| BcoDI | GTCTC | 2 cut(s) | 193, 450 |
| BfaI | CTAG | 2 cut(s) | 656, 900 |
| BisI | GCNGC | 3 cut(s) | 6, 428, 906 |
| BlsI | GCNGC | 3 cut(s) | 7, 429, 907 |
| Bme18I | GGWCC | 1 cut(s) | 943 |
| BmgT120I | GGNCC | 2 cut(s) | 425, 943 |
| BmiI | GGNNCC | 2 cut(s) | 692, 944 |
| BmsI | GCATC | 3 cut(s) | 226, 248, 561 |
| BpiI | GAAGAC | 1 cut(s) | 513 |
| BpuEI | CTTGAG | 3 cut(s) | 13, 365, 715 |
| Bsa29I | ATCGAT | 1 cut(s) | 555 |
| BsaAI | YACGTR | 1 cut(s) | 322 |
| BsaJI | CCNNGG | 1 cut(s) | 946 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 92, 122 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 192, 938 |
| Bse118I | RCCGGY | 1 cut(s) | 687 |
| Bse1I | ACTGG | 1 cut(s) | 828 |
| Bse3DI | GCAATG | 2 cut(s) | 56, 842 |
| BseCI | ATCGAT | 1 cut(s) | 555 |
| BseDI | CCNNGG | 1 cut(s) | 946 |
| BseGI | GGATG | 3 cut(s) | 39, 236, 309 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 192, 938 |
| BseMI | GCAATG | 2 cut(s) | 56, 842 |
| BseMII | CTCAG | 2 cut(s) | 663, 912 |
| BseNI | ACTGG | 1 cut(s) | 828 |
| BseSI | GKGCMC | 1 cut(s) | 695 |
| BseXI | GCAGC | 1 cut(s) | 892 |
| BseYI | CCCAGC | 1 cut(s) | 835 |
| Bsh1285I | CGRYCG | 1 cut(s) | 742 |
| BshFI | GGCC | 2 cut(s) | 427, 687 |
| BshNI | GGYRCC | 1 cut(s) | 690 |
| BshVI | ATCGAT | 1 cut(s) | 555 |
| BsiEI | CGRYCG | 1 cut(s) | 742 |
| BsiHKAI | GWGCWC | 3 cut(s) | 93, 531, 589 |
| BsiSI | CCGG | 1 cut(s) | 688 |
| BslFI | GGGAC | 1 cut(s) | 956 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 192, 938 |
| BsmAI | GTCTC | 2 cut(s) | 193, 450 |
| BsmBI | CGTCTC | 1 cut(s) | 193 |
| BsmFI | GGGAC | 1 cut(s) | 956 |
| BsmI | GAATGC | 1 cut(s) | 359 |
| BsnI | GGCC | 2 cut(s) | 427, 687 |
| Bsp1286I | GDGCHC | 4 cut(s) | 93, 531, 589, 695 |
| Bsp1407I | TGTACA | 1 cut(s) | 622 |
| Bsp143I | GATC | 4 cut(s) | 646, 658, 739, 814 |
| BspACI | CCGC | 1 cut(s) | 428 |
| BspANI | GGCC | 2 cut(s) | 427, 687 |
| BspCNI | CTCAG | 2 cut(s) | 664, 913 |
| BspDI | ATCGAT | 1 cut(s) | 555 |
| BspLI | GGNNCC | 2 cut(s) | 692, 944 |
| BspPI | GGATC | 3 cut(s) | 641, 653, 822 |
| BspT107I | GGYRCC | 1 cut(s) | 690 |
| BsrDI | GCAATG | 2 cut(s) | 56, 842 |
| BsrFI | RCCGGY | 1 cut(s) | 687 |
| BsrGI | TGTACA | 1 cut(s) | 622 |
| BsrI | ACTGG | 1 cut(s) | 828 |
| BssAI | RCCGGY | 1 cut(s) | 687 |
| BssECI | CCNNGG | 1 cut(s) | 946 |
| BssMI | GATC | 4 cut(s) | 646, 658, 739, 814 |
| BssT1I | CCWWGG | 1 cut(s) | 946 |
| Bst4CI | ACNGT | 4 cut(s) | 367, 571, 611, 643 |
| Bst6I | CTCTTC | 3 cut(s) | 212, 448, 483 |
| BstAUI | TGTACA | 1 cut(s) | 622 |
| BstBAI | YACGTR | 1 cut(s) | 322 |
| BstDEI | CTNAG | 4 cut(s) | 197, 672, 921, 935 |
| BstEII | GGTNACC | 1 cut(s) | 151 |
| BstF5I | GGATG | 3 cut(s) | 39, 236, 309 |
| BstKTI | GATC | 4 cut(s) | 649, 661, 742, 817 |
| BstMAI | GTCTC | 2 cut(s) | 193, 450 |
| BstMBI | GATC | 4 cut(s) | 646, 658, 739, 814 |
| BstMCI | CGRYCG | 1 cut(s) | 742 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 395, 853 |
| BstPI | GGTNACC | 1 cut(s) | 151 |
| BstSLI | GKGCMC | 1 cut(s) | 695 |
| BstV1I | GCAGC | 1 cut(s) | 892 |
| BstV2I | GAAGAC | 1 cut(s) | 513 |
| BstX2I | RGATCY | 1 cut(s) | 658 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 548 |
| BstYI | RGATCY | 1 cut(s) | 658 |
| Bsu15I | ATCGAT | 1 cut(s) | 555 |
| BsuRI | GGCC | 2 cut(s) | 427, 687 |
| BsuTUI | ATCGAT | 1 cut(s) | 555 |
| BtsCI | GGATG | 3 cut(s) | 39, 236, 309 |
| BtsIMutI | CAGTG | 2 cut(s) | 531, 607 |
| Cfr10I | RCCGGY | 1 cut(s) | 687 |
| Cfr13I | GGNCC | 2 cut(s) | 425, 943 |
| ClaI | ATCGAT | 1 cut(s) | 555 |
| Csp6I | GTAC | 4 cut(s) | 319, 623, 676, 925 |
| CviAII | CATG | 5 cut(s) | 20, 173, 212, 415, 754 |
| CviQI | GTAC | 4 cut(s) | 319, 623, 676, 925 |
| DdeI | CTNAG | 4 cut(s) | 197, 672, 921, 935 |
| DpnI | GATC | 4 cut(s) | 648, 660, 741, 816 |
| DpnII | GATC | 4 cut(s) | 646, 658, 739, 814 |
| DraIII | CACNNNGTG | 2 cut(s) | 613, 938 |
| Eam1104I | CTCTTC | 3 cut(s) | 212, 448, 483 |
| EarI | CTCTTC | 3 cut(s) | 212, 448, 483 |
| Ecl136II | GAGCTC | 2 cut(s) | 91, 587 |
| Eco130I | CCWWGG | 1 cut(s) | 946 |
| Eco24I | GRGCYC | 2 cut(s) | 93, 589 |
| Eco47I | GGWCC | 1 cut(s) | 943 |
| Eco53kI | GAGCTC | 2 cut(s) | 91, 587 |
| Eco57I | CTGAAG | 2 cut(s) | 150, 507 |
| Eco91I | GGTNACC | 1 cut(s) | 151 |
| EcoICRI | GAGCTC | 2 cut(s) | 91, 587 |
| EcoO65I | GGTNACC | 1 cut(s) | 151 |
| EcoT14I | CCWWGG | 1 cut(s) | 946 |
| EcoT22I | ATGCAT | 1 cut(s) | 241 |
| EcoT38I | GRGCYC | 2 cut(s) | 93, 589 |
| ErhI | CCWWGG | 1 cut(s) | 946 |
| Esp3I | CGTCTC | 1 cut(s) | 193 |
| FaeI | CATG | 5 cut(s) | 23, 176, 215, 418, 757 |
| FaqI | GGGAC | 1 cut(s) | 956 |
| FatI | CATG | 5 cut(s) | 19, 172, 211, 414, 753 |
| Fnu4HI | GCNGC | 3 cut(s) | 6, 428, 906 |
| FokI | GGATG | 3 cut(s) | 26, 243, 316 |
| FriOI | GRGCYC | 2 cut(s) | 93, 589 |
| Fsp4HI | GCNGC | 3 cut(s) | 6, 428, 906 |
| FspBI | CTAG | 2 cut(s) | 656, 900 |
| GluI | GCNGC | 3 cut(s) | 6, 428, 906 |
| GsaI | CCCAGC | 1 cut(s) | 839 |
| HaeIII | GGCC | 2 cut(s) | 427, 687 |
| HapII | CCGG | 1 cut(s) | 688 |
| Hin1II | CATG | 5 cut(s) | 23, 176, 215, 418, 757 |
| HindIII | AAGCTT | 1 cut(s) | 31 |
| HinfI | GANTC | 6 cut(s) | 272, 284, 512, 603, 630, 757 |
| HpaII | CCGG | 1 cut(s) | 688 |
| HphI | GGTGA | 1 cut(s) | 145 |
| Hpy166II | GTNNAC | 4 cut(s) | 325, 607, 616, 625 |
| Hpy188I | TCNGA | 5 cut(s) | 112, 277, 832, 871, 922 |
| Hpy188III | TCNNGA | 6 cut(s) | 288, 344, 662, 743, 761, 818 |
| Hpy8I | GTNNAC | 4 cut(s) | 325, 607, 616, 625 |
| Hpy99I | CGWCG | 1 cut(s) | 647 |
| HpyAV | CCTTC | 3 cut(s) | 274, 285, 557 |
| HpyCH4III | ACNGT | 4 cut(s) | 367, 571, 611, 643 |
| HpyCH4IV | ACGT | 1 cut(s) | 321 |
| HpyCH4V | TGCA | 3 cut(s) | 67, 239, 856 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 395, 853 |
| HpyF3I | CTNAG | 4 cut(s) | 197, 672, 921, 935 |
| HpySE526I | ACGT | 1 cut(s) | 321 |
| Hsp92II | CATG | 5 cut(s) | 23, 176, 215, 418, 757 |
| Kzo9I | GATC | 4 cut(s) | 646, 658, 739, 814 |
| LmnI | GCTCC | 3 cut(s) | 96, 294, 584 |
| LpnPI | CCDG | 7 cut(s) | 212, 273, 701, 720, 809, 849, 923 |
| Lsp1109I | GCAGC | 1 cut(s) | 892 |
| LweI | GCATC | 3 cut(s) | 226, 248, 561 |
| MaeI | CTAG | 2 cut(s) | 656, 900 |
| MaeII | ACGT | 1 cut(s) | 321 |
| MaeIII | GTNAC | 1 cut(s) | 151 |
| MalI | GATC | 4 cut(s) | 648, 660, 741, 816 |
| MboI | GATC | 4 cut(s) | 646, 658, 739, 814 |
| MboII | GAAGA | 7 cut(s) | 143, 199, 462, 465, 500, 513, 802 |
| MflI | RGATCY | 1 cut(s) | 658 |
| MhlI | GDGCHC | 4 cut(s) | 93, 531, 589, 695 |
| MluCI | AATT | 4 cut(s) | 74, 310, 769, 985 |
| MlyI | GAGTC | 3 cut(s) | 281, 612, 624 |
| MmeI | TCCRAC | 2 cut(s) | 118, 674 |
| MnlI | CCTC | 4 cut(s) | 142, 370, 416, 689 |
| Mph1103I | ATGCAT | 1 cut(s) | 241 |
| MseI | TTAA | 1 cut(s) | 315 |
| MslI | CAYNNNNRTG | 3 cut(s) | 44, 413, 437 |
| MspI | CCGG | 1 cut(s) | 688 |
| Mva1269I | GAATGC | 1 cut(s) | 359 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 395, 853 |
| NdeII | GATC | 4 cut(s) | 646, 658, 739, 814 |
| NlaIII | CATG | 5 cut(s) | 23, 176, 215, 418, 757 |
| NlaIV | GGNNCC | 2 cut(s) | 692, 944 |
| NmuCI | GTSAC | 1 cut(s) | 151 |
| NsiI | ATGCAT | 1 cut(s) | 241 |
| PctI | GAATGC | 1 cut(s) | 359 |
| PfeI | GAWTC | 3 cut(s) | 284, 512, 757 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 938 |
| PkrI | GCNGC | 3 cut(s) | 7, 429, 907 |
| Ple19I | CGATCG | 1 cut(s) | 742 |
| PleI | GAGTC | 3 cut(s) | 280, 611, 624 |
| PpsI | GAGTC | 3 cut(s) | 280, 611, 624 |
| Ppu21I | YACGTR | 1 cut(s) | 322 |
| Psp124BI | GAGCTC | 2 cut(s) | 93, 589 |
| PspEI | GGTNACC | 1 cut(s) | 151 |
| PspFI | CCCAGC | 1 cut(s) | 835 |
| PspN4I | GGNNCC | 2 cut(s) | 692, 944 |
| PspPI | GGNCC | 2 cut(s) | 425, 943 |
| PsuI | RGATCY | 1 cut(s) | 658 |
| PvuI | CGATCG | 1 cut(s) | 742 |
| RsaI | GTAC | 4 cut(s) | 320, 624, 677, 926 |
| RsaNI | GTAC | 4 cut(s) | 319, 623, 676, 925 |
| RseI | CAYNNNNRTG | 3 cut(s) | 44, 413, 437 |
| SacI | GAGCTC | 2 cut(s) | 93, 589 |
| SaqAI | TTAA | 1 cut(s) | 315 |
| SatI | GCNGC | 3 cut(s) | 6, 428, 906 |
| Sau3AI | GATC | 4 cut(s) | 646, 658, 739, 814 |
| Sau96I | GGNCC | 2 cut(s) | 425, 943 |
| SchI | GAGTC | 3 cut(s) | 281, 612, 624 |
| SduI | GDGCHC | 4 cut(s) | 93, 531, 589, 695 |
| SfaNI | GCATC | 3 cut(s) | 226, 248, 561 |
| SinI | GGWCC | 1 cut(s) | 943 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 44, 413, 437 |
| SmlI | CTYRAG | 3 cut(s) | 28, 344, 730 |
| SmoI | CTYRAG | 3 cut(s) | 28, 344, 730 |
| Sse9I | AATT | 4 cut(s) | 74, 310, 769, 985 |
| SsiI | CCGC | 1 cut(s) | 428 |
| SspMI | CTAG | 2 cut(s) | 656, 900 |
| SstI | GAGCTC | 2 cut(s) | 93, 589 |
| StyI | CCWWGG | 1 cut(s) | 946 |
| TaaI | ACNGT | 4 cut(s) | 367, 571, 611, 643 |
| TaiI | ACGT | 1 cut(s) | 324 |
| TaqI | TCGA | 3 cut(s) | 555, 645, 762 |
| TasI | AATT | 4 cut(s) | 74, 310, 769, 985 |
| TatI | WGTACW | 2 cut(s) | 622, 924 |
| TauI | GCSGC | 1 cut(s) | 430 |
| TfiI | GAWTC | 3 cut(s) | 284, 512, 757 |
| Tru1I | TTAA | 1 cut(s) | 315 |
| Tru9I | TTAA | 1 cut(s) | 315 |
| TscAI | CASTG | 2 cut(s) | 531, 614 |
| TseFI | GTSAC | 1 cut(s) | 151 |
| TseI | GCWGC | 2 cut(s) | 5, 905 |
| Tsp45I | GTSAC | 1 cut(s) | 151 |
| TspDTI | ATGAA | 6 cut(s) | 25, 183, 366, 455, 484, 504 |
| TspGWI | ACGGA | 2 cut(s) | 535, 583 |
| TspRI | CASTG | 2 cut(s) | 531, 614 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 938 |
| VpaK11BI | GGWCC | 1 cut(s) | 943 |
| XapI | RAATTY | 1 cut(s) | 310 |
| XspI | CTAG | 2 cut(s) | 656, 900 |
| Zsp2I | ATGCAT | 1 cut(s) | 241 |