AT2G37550

ADP-ribosylation factor GTPase-activating protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0005633
Physical Location & Seq
Reverse (-)
15755078 .. 15757601
2524 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G37550.2

Sequence Viewer

Length: 1371 bp
ATGGCAGCGGCGAGACGATTACGGACGCTCCAATCTCAGCCGGAGAACAAGGTCTGTGTCGATTGCTCCCAGAAGAATCCACAATGGGCATCGATTTCATATGGAATCTTCATGTGCTTGGAATGCTCCGGTAAGCACCGTGGTTTAGGTGTTCACATCTCATTCGTCAGATCCGTCACCATGGATTCATGGTCCGAGATCCAGATCAAGAAAATGGACGCTGGAGGCAACGAGCGTCTCAACAATTTTCTCGCTCAGTACGGGATCTCGAAAGAGACTGATATCATCTCCAAGTACAATTCCAACGCCGCGTCTGTGTATCGAGATCGGATCCAAGCTTTAGCTGAGGGAAGACAATGGAGAGATCCGCCGATTGTTAAGGAATCGGTTGGTGGTGGATTGATGAATAAGAAGCCTCCGTTGTCTCAAGGCGGTGGTAGAGATTCTGGTAATGGTGGATGGGATAATTGGGATAACGATGATTCGTTTAGATCTACGGATATGAGGAGGAATCAATCGGCGGGTGATTTTAGGTCATCGGGAGGTCGTGGTGCTCCGGCGAAGTCGAAATCGTCTGAGGATATATATTCACGGTCTCAGCTGGAGGCGTCGGCGGCGAATAAGGAGAGTTTCTTTGCGAAAAGGATGGCTGAGAATGAGTCTAAGCCTGAGGGACTTCCTCCTTCACAAGGTGGTAAGTATGTTGGGTTTGGATCTAGTCCAGGTCCAGCTCCGAGAAGCAATCAACAGAGTGGTGGTGGTGATGTTTTCTCTGTTATGTCTGAGGGTTTTGGAAGATTGTCTCTTGTTGCTGCATCAGCTGCAAATGTTGTTCAGACTGGAACCATGGAGTTTACTTCCAAGGTCAAAGAAGGTGGCTTAGATCAGACGGTCAGTGAGACTGTTAATGTTGTTGCGAGTAAGACAACAGAGATAGGACAGAGGACATGGGGGATCATGAAAGGAGTGATGGCAATTGCCTCACAAAAGGTTGAAGAGTTCACTAAAGAAGAAGCATCAACTTGGAATCAACAGAATAAAACTGAGGGCAACGGTTACTACCAGAACTCTGGGATTGGAAACAAAACAGCAAATTCATCTTTTGGAGGATCACAATCATCATCAAGTGGTCACAACAACAGTTATCGTAACTCGAATTCTTGGGATGACTGGGGAGAAGAGAACAATAGCAAAAAGGAAGCAGCACCAAAGGTGTCGACTTCTAATGATGATGACGACGGCGGTTGGGCTGGTTGGGATGATAATGATGCTAAAGATGATGATTTCTATTATCAGCCTGCAAGCGATAAGAAATCTGTAGGTCACAATGGGAAATCAGACACTGCTTGGACCGGTGGAGGTTTTCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
ko04144 map04144
Pfam Domains
Protein Families
ArfGap

Protein Analysis

456

Amino Acids

49.25

Weight (kDa)

5.98

Isoelectric Point (pI)

48.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ArfGap PF01412 5 - 110 2.1e-35 Putative GTPase activating protein for Arf
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1217
AccII CGCG 1 cut(s) 311
AciI CCGC 7 cut(s) 8, 309, 368, 432, 521, 614, 1242
AclWI GGATC 9 cut(s) 165, 193, 272, 325, 338, 359, 721, 962, 1117
AcsI RAATTY 2 cut(s) 1093, 1156
AcyI GRCGYC 1 cut(s) 608
AdeI CACNNNGTG 1 cut(s) 692
AfaI GTAC 2 cut(s) 260, 296
AfiI CCNNNNNNNGG 1 cut(s) 689
AgeI ACCGGT 1 cut(s) 1352
AgsI TTSAA 1 cut(s) 995
AjnI CCWGG 1 cut(s) 721
AluBI AGCT 5 cut(s) 338, 344, 601, 731, 821
AluI AGCT 5 cut(s) 338, 344, 601, 731, 821
Alw21I GWGCWC 1 cut(s) 556
Alw26I GTCTC 7 cut(s) 7, 242, 269, 429, 600, 807, 893
AlwI GGATC 9 cut(s) 165, 193, 272, 325, 338, 359, 721, 962, 1117
AlwNI CAGNNNCTG 1 cut(s) 1343
ApeKI GCWGC 4 cut(s) 5, 812, 821, 1202
ApoI RAATTY 2 cut(s) 1093, 1156
AsiGI ACCGGT 1 cut(s) 1352
AspS9I GGNCC 3 cut(s) 192, 725, 1350
AsuHPI GGTGA 3 cut(s) 169, 536, 773
AvaII GGWCC 3 cut(s) 192, 725, 1350
AxyI CCTNAGG 1 cut(s) 669
BamHI GGATCC 1 cut(s) 330
BbsI GAAGAC 1 cut(s) 358
Bbv12I GWGCWC 1 cut(s) 556
BbvCI CCTCAGC 1 cut(s) 345
BbvI GCAGC 4 cut(s) 17, 799, 808, 1214
BccI CCATC 3 cut(s) 453, 640, 964
BceAI ACGGC 1 cut(s) 1255
BciT130I CCWGG 1 cut(s) 723
BcoDI GTCTC 7 cut(s) 7, 242, 269, 429, 600, 807, 893
BfaI CTAG 1 cut(s) 717
BfmI CTRYAG 1 cut(s) 1317
BglII AGATCT 1 cut(s) 491
BisI GCNGC 7 cut(s) 6, 9, 309, 615, 813, 822, 1203
BlsI GCNGC 7 cut(s) 7, 10, 310, 616, 814, 823, 1204
Bme1390I CCNGG 1 cut(s) 723
Bme18I GGWCC 3 cut(s) 192, 725, 1350
BmgT120I GGNCC 3 cut(s) 192, 725, 1350
BmiI GGNNCC 2 cut(s) 332, 844
BmrFI CCNGG 1 cut(s) 723
BmrI ACTGGG 1 cut(s) 1180
BmsI GCATC 4 cut(s) 98, 824, 1025, 1258
BmuI ACTGGG 1 cut(s) 1180
BpiI GAAGAC 1 cut(s) 358
BplI GAGNNNNNCTC 1 cut(s) 1350
BpmI CTGGAG 2 cut(s) 243, 623
Bpu10I CCTNAGC 1 cut(s) 345
BpuEI CTTGAG 1 cut(s) 411
Bsa29I ATCGAT 1 cut(s) 92
BsaBI GATNNNNATC 2 cut(s) 203, 1114
BsaHI GRCGYC 1 cut(s) 608
BsaI GGTCTC 1 cut(s) 600
BsaJI CCNNGG 4 cut(s) 139, 180, 846, 861
BsaWI WCCGGW 2 cut(s) 128, 1352
BsaXI ACNNNNNCTCC 2 cut(s) 12, 42
Bsc4I CCNNNNNNNGG 1 cut(s) 689
Bse118I RCCGGY 1 cut(s) 1352
Bse1I ACTGG 2 cut(s) 844, 1175
Bse21I CCTNAGG 1 cut(s) 669
Bse8I GATNNNNATC 2 cut(s) 203, 1114
BseBI CCWGG 1 cut(s) 723
BseCI ATCGAT 1 cut(s) 92
BseDI CCNNGG 4 cut(s) 139, 180, 846, 861
BseGI GGATG 4 cut(s) 464, 651, 1171, 1264
BseJI GATNNNNATC 2 cut(s) 203, 1114
BseLI CCNNNNNNNGG 1 cut(s) 689
BseMII CTCAG 9 cut(s) 50, 269, 336, 567, 611, 642, 660, 774, 1035
BseNI ACTGG 2 cut(s) 844, 1175
BseRI GAGGAG 1 cut(s) 520
BseXI GCAGC 4 cut(s) 17, 799, 808, 1214
Bsh1236I CGCG 1 cut(s) 311
BshTI ACCGGT 1 cut(s) 1352
BshVI ATCGAT 1 cut(s) 92
BsiHKAI GWGCWC 1 cut(s) 556
BsiSI CCGG 4 cut(s) 41, 129, 557, 1353
BslFI GGGAC 1 cut(s) 687
BslI CCNNNNNNNGG 1 cut(s) 689
BsmAI GTCTC 7 cut(s) 7, 242, 269, 429, 600, 807, 893
BsmBI CGTCTC 2 cut(s) 7, 242
BsmFI GGGAC 1 cut(s) 687
BsmI GAATGC 1 cut(s) 128
Bso31I GGTCTC 1 cut(s) 600
Bsp1286I GDGCHC 1 cut(s) 556
Bsp19I CCATGG 2 cut(s) 180, 846
BspACI CCGC 7 cut(s) 8, 309, 368, 432, 521, 614, 1242
BspCNI CTCAG 9 cut(s) 49, 268, 337, 568, 610, 643, 661, 775, 1036
BspDI ATCGAT 1 cut(s) 92
BspFNI CGCG 1 cut(s) 311
BspHI TCATGA 1 cut(s) 957
BspLI GGNNCC 2 cut(s) 332, 844
BspPI GGATC 9 cut(s) 165, 193, 272, 325, 338, 359, 721, 962, 1117
BspTNI GGTCTC 1 cut(s) 600
BsrFI RCCGGY 1 cut(s) 1352
BsrI ACTGG 2 cut(s) 844, 1175
BssAI RCCGGY 1 cut(s) 1352
BssECI CCNNGG 4 cut(s) 139, 180, 846, 861
BssNI GRCGYC 1 cut(s) 608
BssT1I CCWWGG 3 cut(s) 180, 846, 861
Bst2UI CCWGG 1 cut(s) 723
Bst4CI ACNGT 6 cut(s) 140, 594, 892, 904, 1055, 1142
Bst6I CTCTTC 2 cut(s) 990, 1173
BstACI GRCGYC 1 cut(s) 608
BstAPI GCANNNNNTGC 1 cut(s) 821
BstC8I GCNNGC 2 cut(s) 1299, 1303
BstDSI CCRYGG 3 cut(s) 139, 180, 846
BstENI CCTNNNNNAGG 1 cut(s) 687
BstF5I GGATG 4 cut(s) 464, 651, 1171, 1264
BstFNI CGCG 1 cut(s) 311
BstMAI GTCTC 7 cut(s) 7, 242, 269, 429, 600, 807, 893
BstMWI GCNNNNNNNGC 4 cut(s) 123, 614, 818, 821
BstNI CCWGG 1 cut(s) 723
BstSCI CCNGG 1 cut(s) 721
BstSFI CTRYAG 1 cut(s) 1317
BstUI CGCG 1 cut(s) 311
BstV1I GCAGC 4 cut(s) 17, 799, 808, 1214
BstV2I GAAGAC 1 cut(s) 358
BstX2I RGATCY 7 cut(s) 170, 198, 264, 330, 364, 491, 713
BstXI CCANNNNNNTGG 1 cut(s) 1070
BstYI RGATCY 7 cut(s) 170, 198, 264, 330, 364, 491, 713
Bsu15I ATCGAT 1 cut(s) 92
Bsu36I CCTNAGG 1 cut(s) 669
BsuTUI ATCGAT 1 cut(s) 92
BtgI CCRYGG 3 cut(s) 139, 180, 846
BtsCI GGATG 4 cut(s) 464, 651, 1171, 1264
BtsI GCAGTG 1 cut(s) 1341
BtsIMutI CAGTG 2 cut(s) 901, 1341
Cac8I GCNNGC 2 cut(s) 1299, 1303
CaiI CAGNNNCTG 1 cut(s) 1343
CciI TCATGA 1 cut(s) 957
Cfr10I RCCGGY 1 cut(s) 1352
Cfr13I GGNCC 3 cut(s) 192, 725, 1350
ClaI ATCGAT 1 cut(s) 92
CseI GACGC 5 cut(s) 34, 224, 227, 300, 597
Csp6I GTAC 2 cut(s) 259, 295
CspAI ACCGGT 1 cut(s) 1352
CspCI CAANNNNNGTGG 2 cut(s) 856, 891
CviAII CATG 6 cut(s) 112, 181, 189, 847, 948, 958
CviQI GTAC 2 cut(s) 259, 295
DraIII CACNNNGTG 1 cut(s) 692
Eam1104I CTCTTC 2 cut(s) 990, 1173
EarI CTCTTC 2 cut(s) 990, 1173
EciI GGCGGA 1 cut(s) 357
Eco130I CCWWGG 3 cut(s) 180, 846, 861
Eco31I GGTCTC 1 cut(s) 600
Eco32I GATATC 1 cut(s) 283
Eco47I GGWCC 3 cut(s) 192, 725, 1350
Eco81I CCTNAGG 1 cut(s) 669
EcoNI CCTNNNNNAGG 1 cut(s) 687
EcoRI GAATTC 1 cut(s) 1156
EcoRII CCWGG 1 cut(s) 721
EcoRV GATATC 1 cut(s) 283
EcoT14I CCWWGG 3 cut(s) 180, 846, 861
ErhI CCWWGG 3 cut(s) 180, 846, 861
Esp3I CGTCTC 2 cut(s) 7, 242
FaeI CATG 6 cut(s) 115, 184, 192, 850, 951, 961
FaqI GGGAC 1 cut(s) 687
FatI CATG 6 cut(s) 111, 180, 188, 846, 947, 957
FauI CCCGC 1 cut(s) 514
FauNDI CATATG 1 cut(s) 100
FblI GTMKAC 1 cut(s) 1217
Fnu4HI GCNGC 7 cut(s) 6, 9, 309, 615, 813, 822, 1203
FokI GGATG 4 cut(s) 471, 658, 1178, 1271
Fsp4HI GCNGC 7 cut(s) 6, 9, 309, 615, 813, 822, 1203
FspBI CTAG 1 cut(s) 717
GluI GCNGC 7 cut(s) 6, 9, 309, 615, 813, 822, 1203
GsuI CTGGAG 2 cut(s) 243, 623
HapII CCGG 4 cut(s) 41, 129, 557, 1353
HgaI GACGC 5 cut(s) 34, 224, 227, 300, 597
Hin1I GRCGYC 1 cut(s) 608
Hin1II CATG 6 cut(s) 115, 184, 192, 850, 951, 961
HincII GTYRAC 1 cut(s) 1218
HindII GTYRAC 1 cut(s) 1218
HindIII AAGCTT 1 cut(s) 336
HinfI GANTC 9 cut(s) 76, 105, 185, 383, 443, 482, 511, 659, 1027
HpaII CCGG 4 cut(s) 41, 129, 557, 1353
HphI GGTGA 3 cut(s) 169, 536, 773
Hpy166II GTNNAC 4 cut(s) 154, 855, 1002, 1218
Hpy188I TCNGA 9 cut(s) 170, 196, 330, 577, 735, 784, 837, 888, 1339
Hpy188III TCNNGA 6 cut(s) 202, 208, 268, 323, 540, 958
Hpy8I GTNNAC 4 cut(s) 154, 855, 1002, 1218
Hpy99I CGWCG 2 cut(s) 613, 1241
HpyAV CCTTC 2 cut(s) 693, 866
HpyCH4III ACNGT 6 cut(s) 140, 594, 892, 904, 1055, 1142
HpyCH4V TGCA 3 cut(s) 815, 824, 1301
HpyF10VI GCNNNNNNNGC 4 cut(s) 123, 614, 818, 821
Hsp92I GRCGYC 1 cut(s) 608
Hsp92II CATG 6 cut(s) 115, 184, 192, 850, 951, 961
LmnI GCTCC 5 cut(s) 33, 71, 131, 559, 736
Lsp1109I GCAGC 4 cut(s) 17, 799, 808, 1214
LweI GCATC 4 cut(s) 98, 824, 1025, 1258
MaeI CTAG 1 cut(s) 717
MaeIII GTNAC 5 cut(s) 175, 1055, 1130, 1148, 1322
MboII GAAGA 7 cut(s) 85, 100, 363, 807, 1007, 1022, 1190
MfeI CAATTG 1 cut(s) 975
MflI RGATCY 7 cut(s) 170, 198, 264, 330, 364, 491, 713
MhlI GDGCHC 1 cut(s) 556
MluCI AATT 6 cut(s) 244, 298, 466, 975, 1093, 1156
MlyI GAGTC 1 cut(s) 668
MmeI TCCRAC 1 cut(s) 327
MseI TTAA 2 cut(s) 378, 906
MspA1I CMGCKG 3 cut(s) 8, 601, 821
MspI CCGG 4 cut(s) 41, 129, 557, 1353
MspR9I CCNGG 1 cut(s) 723
MunI CAATTG 1 cut(s) 975
Mva1269I GAATGC 1 cut(s) 128
MvaI CCWGG 1 cut(s) 723
MvnI CGCG 1 cut(s) 311
MwoI GCNNNNNNNGC 4 cut(s) 123, 614, 818, 821
NcoI CCATGG 2 cut(s) 180, 846
NdeI CATATG 1 cut(s) 100
NlaIII CATG 6 cut(s) 115, 184, 192, 850, 951, 961
NlaIV GGNNCC 2 cut(s) 332, 844
NmuCI GTSAC 3 cut(s) 175, 1130, 1322
PagI TCATGA 1 cut(s) 957
PcsI WCGNNNNNNNCGW 1 cut(s) 171
PctI GAATGC 1 cut(s) 128
PfeI GAWTC 8 cut(s) 76, 105, 185, 383, 443, 482, 511, 1027
PinAI ACCGGT 1 cut(s) 1352
PkrI GCNGC 7 cut(s) 7, 10, 310, 616, 814, 823, 1204
PleI GAGTC 1 cut(s) 667
PpsI GAGTC 1 cut(s) 667
Psp6I CCWGG 1 cut(s) 721
PspGI CCWGG 1 cut(s) 721
PspN4I GGNNCC 2 cut(s) 332, 844
PspPI GGNCC 3 cut(s) 192, 725, 1350
PstNI CAGNNNCTG 1 cut(s) 1343
PsuI RGATCY 7 cut(s) 170, 198, 264, 330, 364, 491, 713
PvuII CAGCTG 2 cut(s) 601, 821
RsaI GTAC 2 cut(s) 260, 296
RsaNI GTAC 2 cut(s) 259, 295
SalI GTCGAC 1 cut(s) 1216
SaqAI TTAA 2 cut(s) 378, 906
SatI GCNGC 7 cut(s) 6, 9, 309, 615, 813, 822, 1203
Sau96I GGNCC 3 cut(s) 192, 725, 1350
SchI GAGTC 1 cut(s) 668
ScrFI CCNGG 1 cut(s) 723
SduI GDGCHC 1 cut(s) 556
SfaNI GCATC 4 cut(s) 98, 824, 1025, 1258
SfcI CTRYAG 1 cut(s) 1317
SinI GGWCC 3 cut(s) 192, 725, 1350
SmlI CTYRAG 1 cut(s) 426
SmoI CTYRAG 1 cut(s) 426
Sse9I AATT 6 cut(s) 244, 298, 466, 975, 1093, 1156
SsiI CCGC 7 cut(s) 8, 309, 368, 432, 521, 614, 1242
SspMI CTAG 1 cut(s) 717
StyD4I CCNGG 1 cut(s) 721
StyI CCWWGG 3 cut(s) 180, 846, 861
TaaI ACNGT 6 cut(s) 140, 594, 892, 904, 1055, 1142
TaqI TCGA 7 cut(s) 60, 92, 269, 322, 566, 1154, 1217
TasI AATT 6 cut(s) 244, 298, 466, 975, 1093, 1156
TatI WGTACW 1 cut(s) 294
TauI GCSGC 3 cut(s) 11, 311, 617
TfiI GAWTC 8 cut(s) 76, 105, 185, 383, 443, 482, 511, 1027
Tru1I TTAA 2 cut(s) 378, 906
Tru9I TTAA 2 cut(s) 378, 906
TscAI CASTG 2 cut(s) 901, 1348
TseFI GTSAC 3 cut(s) 175, 1130, 1322
TseI GCWGC 4 cut(s) 5, 812, 821, 1202
Tsp45I GTSAC 3 cut(s) 175, 1130, 1322
TspDTI ATGAA 6 cut(s) 87, 100, 177, 419, 974, 1086
TspGWI ACGGA 4 cut(s) 37, 163, 408, 512
TspRI CASTG 2 cut(s) 901, 1348
VpaK11BI GGWCC 3 cut(s) 192, 725, 1350
XagI CCTNNNNNAGG 1 cut(s) 687
XapI RAATTY 2 cut(s) 1093, 1156
XmiI GTMKAC 1 cut(s) 1217
XspI CTAG 1 cut(s) 717
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.