AT2G41190

Amino acid transporter

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
17167279 .. 17170559
3281 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G41190.2

Sequence Viewer

Length: 1611 bp
ATGGAGGACAAGAACAATGATAAGGAGAAAAAAACCGACGTTACGTTCGAAGATGACGAAGATAACGAAGATCTAGAAGACAACAGCAGTAAGTACGAGAACGACAGTGAAACTGATCAAAGCGATCTCGGAGATCTTCCTGGTGATGCTGTTGATCGTGACGACGACATCGATGAACCTTTCATTTCCCAGGTTCAATGGCCTCAAAGCTTCAGGGAAACGACTGATTCTTATACGATTGCGGCATCACCAATCTTCGGGTCGCTCAGGAGTAATCCTCCGAGTTTCTATAGAGCCAGCAGAAGTAATTTAGATGTTGAGTCAAAAGCACCTTTGCTTCCTGAGAGGCATGATGATTCAGACAAAGCCTCAGCTACACAATCTGCTTGGTCTCATAAAGGCTCATTTGCTGAGGAATTGCCCATTGGTGGCTATGGATGCAGCGTCATTCAAACCATTTTCAATGCTATTAATGTAATGGCTGGAGTTGGACTTCTCTCAACACCTTATACAGTGAAAGAAGCTGGTTGGGCAAGTATGGTAATTCTTCTCTTATTTGCTGTTATTTGTTGTTACACTGCTACTTTAATGAAAGACTGTTTCGAGAACAAGACCGGCATTATCACTTATCCTGATATTGGAGAAGCAGCTTTTGGCAAATATGGTCGTATTCTTATCTGTATGCTATTGTACACAGAACTATATTCATATTGTGTTGAATTCATCATTTTGGAAGGAGATAACCTTACCGGGCTTTTCCCTGGTACATCCTTGGATTTGCTCGGGTTCCGACTTGACTCTAAGCATTTATTTGGAATCTTAACTGCTCTCATTGTTCTTCCAACTGTTTGGTTGAAAGATCTACGCATCATTTCCTACCTCTCAGCCGGTGGAGTTATCGCAACCGCTTTGATAGCAGTAAGCGTGTTTTTCCTCGGTACAACGGGCGGGATTGGGTTTCATCACACCGGGCAGGCTGTGAAATGGAACGGGATACCGTTTGCAATTGGTATATACGGGTTTTGCTATTCAGGACATTCAGTGTTCCCAAATATATACCAATCCATGGCTGATAAAACCAAATTCAACAAAGCAGTGATCACTTGTTTCATTATATGTGTTTTGTTATACGGAGGAGTTGCAATCATGGGTTATCTCATGTTTGGAGAAGCTACCTTGTCTCAGATTACACTAAACATGCCACAGGACCAATTTTTCTCAAAAGTGGCACAGTGGACAACGGTTGTGAGTCCGTTTACAAAATACGCTCTCCTGATGAATCCACTTGCAAGGAGTATAGAAGAACTATTACCGGAAAGAATGTCAGAGAACATATGGTGCTTTCTTCTTCTAAGAACAGCACTCGTCGCTTCTTCTGTTTGTTCTGCTTTCCTTATTCCATTTTTTGGTCTTATGATGGCTCTTATAGGATCTCTTCTCAGTATACTAGTGGCAATAATAATGCCAGCTTTATGCTTCATAAAGATAATGGGGAACAAAGCAACAAGAACACAGATGATTCTGAGTTCGATCATTGTGGCCATCGGGGTGGTAAGCGGGACCTTGGGGACATATTCTTCGGTGGCAAAGATCATTAGGAACTATCAGTGA

Protein Analysis

536

Amino Acids

58.86

Weight (kDa)

4.76

Isoelectric Point (pI)

38.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aa_trans PF01490 148 - 471 2.8e-56 Transmembrane amino acid transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011484)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 1066, 1406
AccI GTMKAC 1 cut(s) 1444
AciI CCGC 4 cut(s) 242, 906, 948, 1557
AclWI GGATC 1 cut(s) 1438
AcoI YGGCCR 1 cut(s) 1539
AcsI RAATTY 2 cut(s) 719, 1082
AcuI CTGAAG 1 cut(s) 196
AfaI GTAC 4 cut(s) 95, 692, 766, 940
AfiI CCNNNNNNNGG 5 cut(s) 257, 428, 638, 1066, 1406
AgsI TTSAA 6 cut(s) 197, 452, 463, 719, 856, 1087
AhlI ACTAGT 1 cut(s) 1447
AjnI CCWGG 3 cut(s) 139, 189, 760
AjuI GAANNNNNNNTTGG 4 cut(s) 408, 440, 636, 668
AluBI AGCT 6 cut(s) 210, 374, 524, 650, 1172, 1469
AluI AGCT 6 cut(s) 210, 374, 524, 650, 1172, 1469
Alw26I GTCTC 2 cut(s) 396, 1185
AlwI GGATC 1 cut(s) 1438
Ama87I CYCGRG 1 cut(s) 782
AoxI GGCC 2 cut(s) 200, 1539
ApeKI GCWGC 2 cut(s) 441, 647
ApoI RAATTY 2 cut(s) 719, 1082
ArsI GACNNNNNNTTYG 4 cut(s) 29, 61, 1561, 1593
AseI ATTAAT 1 cut(s) 471
AspS9I GGNCC 2 cut(s) 1207, 1560
AsuC2I CCSGG 2 cut(s) 751, 970
AsuHPI GGTGA 2 cut(s) 155, 240
AsuII TTCGAA 1 cut(s) 48
AvaI CYCGRG 1 cut(s) 782
AvaII GGWCC 2 cut(s) 1207, 1560
BalI TGGCCA 1 cut(s) 1541
BarI GAAGNNNNNNTAC 2 cut(s) 1293, 1325
BbsI GAAGAC 1 cut(s) 84
BbvCI CCTCAGC 2 cut(s) 370, 411
BbvI GCAGC 2 cut(s) 453, 659
BccI CCATC 2 cut(s) 1411, 1550
BciT130I CCWGG 3 cut(s) 141, 191, 762
BciVI GTATCC 1 cut(s) 987
BclI TGATCA 2 cut(s) 115, 1098
BcnI CCSGG 2 cut(s) 751, 970
BcoDI GTCTC 2 cut(s) 396, 1185
BcuI ACTAGT 1 cut(s) 1447
BfaI CTAG 2 cut(s) 74, 1448
BfmI CTRYAG 1 cut(s) 289
BfuI GTATCC 1 cut(s) 987
BglII AGATCT 3 cut(s) 70, 133, 859
BisI GCNGC 3 cut(s) 243, 442, 648
BlsI GCNGC 3 cut(s) 244, 443, 649
Bme1390I CCNGG 5 cut(s) 141, 191, 751, 762, 970
Bme18I GGWCC 2 cut(s) 1207, 1560
BmeT110I CYCGRG 1 cut(s) 782
BmgT120I GGNCC 2 cut(s) 1207, 1560
BmiI GGNNCC 2 cut(s) 788, 1561
BmrFI CCNGG 5 cut(s) 141, 191, 751, 762, 970
BmsI GCATC 4 cut(s) 136, 254, 428, 876
BpiI GAAGAC 1 cut(s) 84
BplI GAGNNNNNCTC 2 cut(s) 262, 294
BpmI CTGGAG 1 cut(s) 504
Bpu10I CCTNAGC 3 cut(s) 266, 370, 411
Bpu14I TTCGAA 1 cut(s) 48
BpuMI CCSGG 2 cut(s) 751, 970
Bsa29I ATCGAT 1 cut(s) 171
BsaI GGTCTC 1 cut(s) 396
BsaJI CCNNGG 6 cut(s) 189, 760, 771, 934, 1065, 1563
BsaWI WCCGGW 1 cut(s) 1312
Bsc4I CCNNNNNNNGG 5 cut(s) 257, 428, 638, 1066, 1406
Bse118I RCCGGY 2 cut(s) 614, 887
BseBI CCWGG 3 cut(s) 141, 191, 762
BseCI ATCGAT 1 cut(s) 171
BseDI CCNNGG 6 cut(s) 189, 760, 771, 934, 1065, 1563
BseGI GGATG 2 cut(s) 443, 767
BseLI CCNNNNNNNGG 5 cut(s) 257, 428, 638, 1066, 1406
BseMII CTCAG 8 cut(s) 280, 333, 384, 402, 897, 1196, 1453, 1514
BseRI GAGGAG 1 cut(s) 1149
BseXI GCAGC 2 cut(s) 453, 659
BshFI GGCC 2 cut(s) 202, 1541
BshVI ATCGAT 1 cut(s) 171
BsiHKCI CYCGRG 1 cut(s) 782
BsiSI CCGG 5 cut(s) 615, 750, 888, 969, 1313
BslFI GGGAC 2 cut(s) 1573, 1582
BslI CCNNNNNNNGG 5 cut(s) 257, 428, 638, 1066, 1406
BsmAI GTCTC 2 cut(s) 396, 1185
BsmFI GGGAC 2 cut(s) 1573, 1582
BsnI GGCC 2 cut(s) 202, 1541
Bso31I GGTCTC 1 cut(s) 396
BsoBI CYCGRG 1 cut(s) 782
Bsp119I TTCGAA 1 cut(s) 48
Bsp1407I TGTACA 1 cut(s) 690
Bsp19I CCATGG 1 cut(s) 1065
BspACI CCGC 4 cut(s) 242, 906, 948, 1557
BspANI GGCC 2 cut(s) 202, 1541
BspCNI CTCAG 8 cut(s) 279, 334, 383, 403, 896, 1195, 1452, 1515
BspDI ATCGAT 1 cut(s) 171
BspLI GGNNCC 2 cut(s) 788, 1561
BspPI GGATC 1 cut(s) 1438
BspT104I TTCGAA 1 cut(s) 48
BspTNI GGTCTC 1 cut(s) 396
BsrFI RCCGGY 2 cut(s) 614, 887
BsrGI TGTACA 1 cut(s) 690
BssAI RCCGGY 2 cut(s) 614, 887
BssECI CCNNGG 6 cut(s) 189, 760, 771, 934, 1065, 1563
BssNAI GTATAC 1 cut(s) 1445
BssT1I CCWWGG 3 cut(s) 771, 1065, 1563
Bst1107I GTATAC 1 cut(s) 1445
Bst2UI CCWGG 3 cut(s) 141, 191, 762
Bst4CI ACNGT 7 cut(s) 107, 514, 599, 847, 999, 1233, 1243
Bst6I CTCTTC 1 cut(s) 1440
BstAUI TGTACA 1 cut(s) 690
BstBI TTCGAA 1 cut(s) 48
BstC8I GCNNGC 3 cut(s) 298, 975, 1467
BstDSI CCRYGG 1 cut(s) 1065
BstF5I GGATG 2 cut(s) 443, 767
BstMAI GTCTC 2 cut(s) 396, 1185
BstMWI GCNNNNNNNGC 4 cut(s) 438, 530, 914, 1367
BstNI CCWGG 3 cut(s) 141, 191, 762
BstNSI RCATGY 1 cut(s) 1201
BstSCI CCNGG 5 cut(s) 139, 189, 749, 760, 968
BstSFI CTRYAG 1 cut(s) 289
BstV1I GCAGC 2 cut(s) 453, 659
BstV2I GAAGAC 1 cut(s) 84
BstX2I RGATCY 4 cut(s) 70, 133, 859, 1430
BstXI CCANNNNNNTGG 2 cut(s) 849, 1549
BstYI RGATCY 4 cut(s) 70, 133, 859, 1430
BstZ17I GTATAC 1 cut(s) 1445
Bsu15I ATCGAT 1 cut(s) 171
BsuI GTATCC 1 cut(s) 987
BsuRI GGCC 2 cut(s) 202, 1541
BsuTUI ATCGAT 1 cut(s) 171
BtgI CCRYGG 1 cut(s) 1065
BtsCI GGATG 2 cut(s) 443, 767
BtsI GCAGTG 2 cut(s) 576, 1101
BtsIMutI CAGTG 6 cut(s) 112, 519, 576, 1047, 1101, 1238
Cac8I GCNNGC 3 cut(s) 298, 975, 1467
Cfr10I RCCGGY 2 cut(s) 614, 887
Cfr13I GGNCC 2 cut(s) 1207, 1560
ClaI ATCGAT 1 cut(s) 171
CseI GACGC 1 cut(s) 433
Csp6I GTAC 4 cut(s) 94, 691, 765, 939
CviAII CATG 5 cut(s) 350, 1066, 1147, 1159, 1198
CviQI GTAC 4 cut(s) 94, 691, 765, 939
EaeI YGGCCR 1 cut(s) 1539
Eam1104I CTCTTC 1 cut(s) 1440
EarI CTCTTC 1 cut(s) 1440
Eco130I CCWWGG 3 cut(s) 771, 1065, 1563
Eco31I GGTCTC 1 cut(s) 396
Eco47I GGWCC 2 cut(s) 1207, 1560
Eco57I CTGAAG 1 cut(s) 196
Eco88I CYCGRG 1 cut(s) 782
EcoO109I RGGNCCY 1 cut(s) 1560
EcoRI GAATTC 1 cut(s) 719
EcoRII CCWGG 3 cut(s) 139, 189, 760
EcoT14I CCWWGG 3 cut(s) 771, 1065, 1563
ErhI CCWWGG 3 cut(s) 771, 1065, 1563
FaeI CATG 5 cut(s) 353, 1069, 1150, 1162, 1201
FaqI GGGAC 2 cut(s) 1573, 1582
FatI CATG 5 cut(s) 349, 1065, 1146, 1158, 1197
FauI CCCGC 2 cut(s) 941, 1550
FauNDI CATATG 1 cut(s) 1334
FbaI TGATCA 2 cut(s) 115, 1098
FblI GTMKAC 1 cut(s) 1444
Fnu4HI GCNGC 3 cut(s) 243, 442, 648
FokI GGATG 2 cut(s) 450, 754
Fsp4HI GCNGC 3 cut(s) 243, 442, 648
FspBI CTAG 2 cut(s) 74, 1448
GluI GCNGC 3 cut(s) 243, 442, 648
GsuI CTGGAG 1 cut(s) 504
HaeIII GGCC 2 cut(s) 202, 1541
HapII CCGG 5 cut(s) 615, 750, 888, 969, 1313
HgaI GACGC 1 cut(s) 433
Hin1II CATG 5 cut(s) 353, 1069, 1150, 1162, 1201
HindIII AAGCTT 1 cut(s) 208
HinfI GANTC 8 cut(s) 227, 320, 356, 797, 816, 1249, 1279, 1519
HpaII CCGG 5 cut(s) 615, 750, 888, 969, 1313
HphI GGTGA 2 cut(s) 155, 240
Hpy166II GTNNAC 4 cut(s) 693, 1236, 1257, 1445
Hpy188I TCNGA 7 cut(s) 131, 282, 361, 791, 1185, 1327, 1524
Hpy188III TCNNGA 8 cut(s) 74, 158, 268, 341, 604, 632, 1032, 1273
Hpy8I GTNNAC 4 cut(s) 693, 1236, 1257, 1445
Hpy99I CGWCG 3 cut(s) 41, 167, 1370
HpyAV CCTTC 1 cut(s) 728
HpyCH4III ACNGT 7 cut(s) 107, 514, 599, 847, 999, 1233, 1243
HpyCH4IV ACGT 2 cut(s) 39, 44
HpyCH4V TGCA 4 cut(s) 441, 1004, 1142, 1289
HpyF10VI GCNNNNNNNGC 4 cut(s) 438, 530, 914, 1367
HpySE526I ACGT 2 cut(s) 39, 44
Hsp92II CATG 5 cut(s) 353, 1069, 1150, 1162, 1201
Ksp22I TGATCA 2 cut(s) 115, 1098
Lsp1109I GCAGC 2 cut(s) 453, 659
LweI GCATC 4 cut(s) 136, 254, 428, 876
MaeI CTAG 2 cut(s) 74, 1448
MaeII ACGT 2 cut(s) 39, 44
MaeIII GTNAC 3 cut(s) 40, 158, 572
MfeI CAATTG 1 cut(s) 1005
MflI RGATCY 4 cut(s) 70, 133, 859, 1430
MlsI TGGCCA 1 cut(s) 1541
MluCI AATT 7 cut(s) 307, 416, 543, 719, 1005, 1082, 1211
MluNI TGGCCA 1 cut(s) 1541
MlyI GAGTC 3 cut(s) 329, 791, 1258
MmeI TCCRAC 3 cut(s) 469, 814, 866
MnlI CCTC 8 cut(s) 213, 288, 339, 379, 406, 890, 944, 1127
Mox20I TGGCCA 1 cut(s) 1541
MscI TGGCCA 1 cut(s) 1541
MseI TTAA 3 cut(s) 471, 587, 821
MslI CAYNNNNRTG 1 cut(s) 1547
Msp20I TGGCCA 1 cut(s) 1541
MspI CCGG 5 cut(s) 615, 750, 888, 969, 1313
MspR9I CCNGG 5 cut(s) 141, 191, 751, 762, 970
MunI CAATTG 1 cut(s) 1005
MvaI CCWGG 3 cut(s) 141, 191, 762
MwoI GCNNNNNNNGC 4 cut(s) 438, 530, 914, 1367
NciI CCSGG 2 cut(s) 751, 970
NcoI CCATGG 1 cut(s) 1065
NdeI CATATG 1 cut(s) 1334
NlaIII CATG 5 cut(s) 353, 1069, 1150, 1162, 1201
NlaIV GGNNCC 2 cut(s) 788, 1561
NmuCI GTSAC 1 cut(s) 158
NspI RCATGY 1 cut(s) 1201
NspV TTCGAA 1 cut(s) 48
PcsI WCGNNNNNNNCGW 4 cut(s) 45, 54, 63, 168
PfeI GAWTC 5 cut(s) 227, 356, 816, 1279, 1519
PflMI CCANNNNNTGG 2 cut(s) 1066, 1406
PkrI GCNGC 3 cut(s) 244, 443, 649
PleI GAGTC 3 cut(s) 328, 791, 1257
PpsI GAGTC 3 cut(s) 328, 791, 1257
PpuMI RGGWCCY 1 cut(s) 1560
PshBI ATTAAT 1 cut(s) 471
Psp5II RGGWCCY 1 cut(s) 1560
Psp6I CCWGG 3 cut(s) 139, 189, 760
PspGI CCWGG 3 cut(s) 139, 189, 760
PspN4I GGNNCC 2 cut(s) 788, 1561
PspPI GGNCC 2 cut(s) 1207, 1560
PspPPI RGGWCCY 1 cut(s) 1560
PsuI RGATCY 4 cut(s) 70, 133, 859, 1430
RsaI GTAC 4 cut(s) 95, 692, 766, 940
RsaNI GTAC 4 cut(s) 94, 691, 765, 939
RseI CAYNNNNRTG 1 cut(s) 1547
SaqAI TTAA 3 cut(s) 471, 587, 821
SatI GCNGC 3 cut(s) 243, 442, 648
Sau96I GGNCC 2 cut(s) 1207, 1560
SchI GAGTC 3 cut(s) 329, 791, 1258
ScrFI CCNGG 5 cut(s) 141, 191, 751, 762, 970
SfaNI GCATC 4 cut(s) 136, 254, 428, 876
SfcI CTRYAG 1 cut(s) 289
SfuI TTCGAA 1 cut(s) 48
SinI GGWCC 2 cut(s) 1207, 1560
SmiMI CAYNNNNRTG 1 cut(s) 1547
SpeI ACTAGT 1 cut(s) 1447
Sse9I AATT 7 cut(s) 307, 416, 543, 719, 1005, 1082, 1211
SsiI CCGC 4 cut(s) 242, 906, 948, 1557
SspMI CTAG 2 cut(s) 74, 1448
StyD4I CCNGG 5 cut(s) 139, 189, 749, 760, 968
StyI CCWWGG 3 cut(s) 771, 1065, 1563
TaaI ACNGT 7 cut(s) 107, 514, 599, 847, 999, 1233, 1243
TaiI ACGT 2 cut(s) 42, 47
TaqI TCGA 4 cut(s) 48, 171, 603, 1529
TasI AATT 7 cut(s) 307, 416, 543, 719, 1005, 1082, 1211
TatI WGTACW 1 cut(s) 690
TauI GCSGC 1 cut(s) 245
TfiI GAWTC 5 cut(s) 227, 356, 816, 1279, 1519
Tru1I TTAA 3 cut(s) 471, 587, 821
Tru9I TTAA 3 cut(s) 471, 587, 821
TscAI CASTG 6 cut(s) 112, 519, 583, 1047, 1101, 1238
TseFI GTSAC 1 cut(s) 158
TseI GCWGC 2 cut(s) 441, 647
Tsp45I GTSAC 1 cut(s) 158
TspDTI ATGAA 9 cut(s) 172, 189, 605, 696, 712, 950, 1099, 1292, 1468
TspGWI ACGGA 2 cut(s) 1146, 1242
TspRI CASTG 6 cut(s) 112, 519, 583, 1047, 1101, 1238
Van91I CCANNNNNTGG 2 cut(s) 1066, 1406
VpaK11BI GGWCC 2 cut(s) 1207, 1560
VspI ATTAAT 1 cut(s) 471
XapI RAATTY 2 cut(s) 719, 1082
XbaI TCTAGA 1 cut(s) 73
XceI RCATGY 1 cut(s) 1201
XmiI GTMKAC 1 cut(s) 1444
XspI CTAG 2 cut(s) 74, 1448
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.